>ATL1E_ARATH (Q9C7E9) Putative RING-H2 finger protein ATL1E|
          Length = 336

 Score = 40.8 bits (94), Expect = 0.004
 Identities = 46/189 (24%), Positives = 79/189 (41%), Gaps = 6/189 (3%)
 Frame = +2

Query: 92  GMQLSCSGHD-TILDHHVLGSCRVTEIYYRHRVINIIPLVEPSTQCPFQKLISANLATDV 268
           G  L C+  D T+L+  + G+  V EI Y+ + I+I         C  ++L++ N +   
Sbjct: 39  GFNLHCNNLDKTVLELPMSGTFLVDEINYQKQQISI----SDPENCMVKRLLTFNTSGSP 94

Query: 269 YKQPQSSREVMTMVRCSRDFT-PVDQYRIVGPASCVSNNASQFWYMAVSYAYISDLPRDC 445
           +    S     T + C  +   PV     +    C+SN+ S F +   +  +   LP  C
Sbjct: 95  FSYGFSF--YYTFLTCPNEVVIPVWSLMSI---PCLSNSTSSF-FATSNLTFSKLLPPSC 148

Query: 446 MAVSKGIPVPFTYDNHGPNYDYTFKANTVLNSGETTFTWHFNNITDV----CQQCEHKGR 613
             V KG+ VP          D  +K       G +T  W  N + +     C+ CE +  
Sbjct: 149 QIV-KGLYVPV---------DVIYKDVITEEKGFSTVPWLGNVLLEWSSPNCRGCEKESL 198

Query: 614 HCGFSSQSN 640
            CGF ++++
Sbjct: 199 RCGFKNKAS 207

>MEGF9_MOUSE (Q8BH27) Multiple epidermal growth factor-like domains 9 precursor|
           (EGF-like domain-containing protein 5) (Multiple
           EGF-like domain protein 5)
          Length = 600

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
 Frame = +2

Query: 284 SSREVMTMVRCSRDFTPVDQYRIVGPAS--CVS--NNASQFWYMAVSYAYISDLPRDCMA 451
           +S  + T   C     P+   +I  P S  C++  +N + FW       Y+ DL R+C+ 
Sbjct: 390 NSDSICTQCECHGHVDPIKTPKICKPESGECINCLHNTTGFWCEKCLEGYVRDLQRNCIK 449

Query: 452 VSKGIPVP 475
               +P P
Sbjct: 450 QEVIVPTP 457

>COX3_PAPHA (Q9ZXX8) Cytochrome c oxidase subunit 3 (EC 1.9.3.1) (Cytochrome c|
           oxidase polypeptide III)
          Length = 261

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)
 Frame = +3

Query: 228 HFRSSSQQT*QLMCTNNLNHHEKL*PWY--VVQEISHQ*INTV**AQPLVSVTTLANSGI 401
           HF S++  T  L+ TN L  ++    W+  +++E ++Q  +T         V      G+
Sbjct: 36  HFYSTALLTLGLL-TNVLTMYQ----WWRDIIRESTYQGHHTT-------PVQKSLRYGM 83

Query: 402 WRYLMHTYLIFHGTAWLFLKAS--PYPSLMIIMAPTMITPSRQIQSSTLERQHLLGTSIT 575
             +++     F G  W F  +S  P P L     PT ITP   ++   L    LL + +T
Sbjct: 84  TLFIISEVFFFAGFFWAFYHSSLAPTPRLGCHWPPTGITPLNPLEVPLLNTSVLLASGVT 143

Query: 576 LLMSANSV 599
           +  + +S+
Sbjct: 144 ITWAHHSL 151

>G59B_DROER (Q8I1F0) Putative gustatory receptor 59b|
          Length = 587

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 16/77 (20%), Positives = 34/77 (44%), Gaps = 13/77 (16%)
 Frame = -2

Query: 526 ICLEGVIIVGAMIIISEGYGDAFRNSHA-------------VPWKIRYVCIRYRHIPELA 386
           I +  +++    +++  GY   F  ++A             V W++R V +  RH P+L 
Sbjct: 285 IVVHSIMLFQFHLVMRGGYTTLFSRTYALLANIITLTMLPIVMWQVRSVFLAKRHYPQLI 344

Query: 385 SVVTDTRGWAYYTVLIY 335
            +  D R    + +++Y
Sbjct: 345 LITNDIRYTVSFLIILY 361

>NAS28_CAEEL (P98061) Zinc metalloproteinase nas-28 precursor (EC 3.4.24.21)|
           (Nematode astacin 28)
          Length = 497

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 8/113 (7%)
 Frame = +2

Query: 338 DQYRIVGPASCVSNNASQFWYMAVSYAYISDLPRDCMAVSKGIPVPFTYDNHGPNYDYTF 517
           D Y  V  ++ + + A  F  MAV  A + +LP D  +V +  P  F  D+    Y    
Sbjct: 232 DNYVYVDFSNIIPSQAYNFQKMAVDQAQLLNLPYDYGSVMQYYPYAFAVDS--SKYTILA 289

Query: 518 KANTVLNSGETTFTWHFNNITDV------CQQC--EHKGRHCGFSSQSNQAFC 652
           K N   NS        F++I  V        QC  + K  +CG +   N   C
Sbjct: 290 KENGFQNSMGQREAPAFSDIIGVNKLYNCTSQCKIQMKCSNCGITDSRNCNQC 342

>DICER_HUMAN (Q9UPY3) Endoribonuclease Dicer (EC 3.1.26.-) (Helicase with RNase|
            motif) (Helicase-MOI)
          Length = 1912

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +2

Query: 482  YDNHGPNYDYTFKANTVLNSGETTFTWHFNNITDVCQQCEHKG 610
            ++N     +Y FK    L    T  ++H+N ITD  Q+ E  G
Sbjct: 1656 FENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLG 1698


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 100,285,116
Number of Sequences: 219361
Number of extensions: 2143051
Number of successful extensions: 5683
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5682
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)