ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8l02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HKT6_ORYSA (Q6H501) Probable cation transporter HKT6 (OsHKT6) 188 1e-47
2HKT4_ORYSA (Q7XPF8) Cation transporter HKT4 (OsHKT4) 103 4e-22
3HKT8_ORYSA (Q3YAF4) Cation transporter HKT8 (OsHKT8) 75 2e-13
4HKT9_ORYSA (Q8L4K5) Probable cation transporter HKT9 (OsHKT9) 71 3e-12
5HKT3_ORYSA (Q8L481) Probable cation transporter HKT3 (OsHKT3) 65 2e-10
6HKT2_ORYSA (Q93XI5) Cation transporter HKT2 (OsHKT2) (Po-OsHKT2) 61 2e-09
7HKT1_ORYSA (Q6TPH3) Cation transporter HKT1 (OsHKT1) (Ni-OsHKT1)... 60 5e-09
8HKT7_ORYSA (Q7XPF7) Probable cation transporter HKT7 (OsHKT7) 60 7e-09
9HKT1_ARATH (Q84TI7) Sodium transporter HKT1 (AtHKT1) 53 8e-07
10RK35_SPIOL (P23326) 50S ribosomal protein L35, chloroplast precu... 30 7.2

>HKT6_ORYSA (Q6H501) Probable cation transporter HKT6 (OsHKT6)|
          Length = 530

 Score =  188 bits (477), Expect = 1e-47
 Identities = 101/176 (57%), Positives = 119/176 (67%)
 Frame = +1

Query: 82  MNNSPVVHLKSLRTFXAFVATKLSYFAKSAQQSMKYSCQFICHTNPLFIQVTYFALISFA 261
           MN+  VV  K L+TF  F A+K S F KSAQ+S+KYS QFI   NPLF+ V YFALISFA
Sbjct: 1   MNHCLVVSHKKLQTFRTFAASKFSSFTKSAQKSIKYSFQFIYQNNPLFVHVAYFALISFA 60

Query: 262 GYEALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSKQLWILAILMLIGXE 441
           GY +LKVL  +DKSNTLKDL VLF              EME+FSS QLW+L ILMLIG E
Sbjct: 61  GYGSLKVLKPRDKSNTLKDLDVLFTSVSASTVSSMATVEMEDFSSAQLWVLTILMLIGGE 120

Query: 442 VFTSILGLHFXRAKFNSXNSFNRRDQISHVDIESINVTNFDPTASHGTKDGASFSE 609
           VFTS+LG+HF RA+F +  S + RD    +DIESI  T F P ++ GTK   SFSE
Sbjct: 121 VFTSMLGIHFMRAEFGTKESVSTRDHSPCIDIESITSTKFGP-STQGTKVTVSFSE 175



to top

>HKT4_ORYSA (Q7XPF8) Cation transporter HKT4 (OsHKT4)|
          Length = 552

 Score =  103 bits (257), Expect = 4e-22
 Identities = 59/150 (39%), Positives = 83/150 (55%), Gaps = 1/150 (0%)
 Frame = +1

Query: 94  PVVHLKSLRTFXAFVATKLSYFAKSAQQSMKYSCQF-ICHTNPLFIQVTYFALISFAGYE 270
           P ++ +  +    F++ KL   A+    S+K S  F +C +NPL +Q+ YF +ISFAG+ 
Sbjct: 30  PRIYWEKAQHLCGFLSMKLISRARCVASSVKQSYSFLVCKSNPLVVQLVYFVIISFAGFL 89

Query: 271 ALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSKQLWILAILMLIGXEVFT 450
           ALK L  Q K    KDL +LF              EME+ S +QLW+L +LML+G EVFT
Sbjct: 90  ALKNLKPQGKPGP-KDLDLLFTSVSTLTVSSMATVEMEDLSDRQLWVLILLMLMGGEVFT 148

Query: 451 SILGLHFXRAKFNSXNSFNRRDQISHVDIE 540
           S+LGL+F  A  N   +  R      +DIE
Sbjct: 149 SMLGLYFNNANANRNENSQRSLPSISLDIE 178



to top

>HKT8_ORYSA (Q3YAF4) Cation transporter HKT8 (OsHKT8)|
          Length = 554

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 1/99 (1%)
 Frame = +1

Query: 199 FICHTNPLFIQVTYFALISFAGYEALKVLNSQDKSNTLK-DLXVLFXXXXXXXXXXXXXX 375
           F+ H +P ++Q+ YF  IS  G+  LK L  +        DL ++F              
Sbjct: 21  FLFHAHPFWLQLLYFLFISLLGFLMLKALPMKTSMVPRPMDLDLIFTSVSATTVSSMVAV 80

Query: 376 EMEEFSSKQLWILAILMLIGXEVFTSILGLHFXRAKFNS 492
           EME FS+ QL ++ +LML+G EVFTSILGL+F  AK++S
Sbjct: 81  EMESFSNSQLLLITLLMLLGGEVFTSILGLYFTNAKYSS 119



to top

>HKT9_ORYSA (Q8L4K5) Probable cation transporter HKT9 (OsHKT9)|
          Length = 509

 Score = 70.9 bits (172), Expect = 3e-12
 Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
 Frame = +1

Query: 145 KLSYFAKSAQQSMKYS---CQFIC-HTNPLFIQVTYFALISFAGYEALKVLNSQDKSNTL 312
           +L  F  SA+ ++  S   C+FI  H +PL I ++YF +I   G+ AL VL   +     
Sbjct: 4   RLHIFVSSARHAINSSALICRFIAFHLSPLLIHLSYFLIIDVLGFVALVVLRPSNHKYNP 63

Query: 313 KDLXVLFXXXXXXXXXXXXXXEMEEFSSKQLWILAILMLIGXEVFTSILGLHFXRAKFNS 492
           + + + F              +ME+ SS Q+ +L +LM +G E+F S LGL    +K N 
Sbjct: 64  RYIDMFFLSTSAVTVTGLATTQMEDLSSSQIAVLTLLMFLGSEMFLSFLGLVLESSKQNK 123

Query: 493 XNSFNRR 513
            +  NRR
Sbjct: 124 HDPENRR 130



to top

>HKT3_ORYSA (Q8L481) Probable cation transporter HKT3 (OsHKT3)|
          Length = 509

 Score = 65.1 bits (157), Expect = 2e-10
 Identities = 37/119 (31%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = +1

Query: 160 AKSAQQSMKYSCQFIC-HTNPLFIQVTYFALISFAGYEALKVLNSQDKSNTLKDLXVLFX 336
           A+ A  S  + C+FI  H +PL I ++YF +I   G+ +L VL   +     + + + F 
Sbjct: 12  ARHAINSSAFICRFIAYHLSPLLIHLSYFLIIDILGFVSLVVLRPSNHKYNPRYVDMFFL 71

Query: 337 XXXXXXXXXXXXXEMEEFSSKQLWILAILMLIGXEVFTSILGLHFXRAKFNSXNSFNRR 513
                        +ME+ SS Q+ IL +LM +  ++F S LGL    +K N  +  NRR
Sbjct: 72  STSAVTVIGLATIQMEDLSSSQIAILTLLMFLDSKMFLSFLGLVLESSKQNKHDPENRR 130



to top

>HKT2_ORYSA (Q93XI5) Cation transporter HKT2 (OsHKT2) (Po-OsHKT2)|
          Length = 530

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 40/111 (36%), Positives = 53/111 (47%)
 Frame = +1

Query: 208 HTNPLFIQVTYFALISFAGYEALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEE 387
           H +P +IQ++YF LIS  G   L  L           + +LF              EME 
Sbjct: 37  HVHPFWIQLSYFLLISILGSVLLMFLKPSSPEFKPGYIDMLFLSTSAMTVSGLSTIEMEV 96

Query: 388 FSSKQLWILAILMLIGXEVFTSILGLHFXRAKFNSXNSFNRRDQISHVDIE 540
            SS Q+ +L +LML+G EVF S LGL   R K      F+  D++S V IE
Sbjct: 97  LSSSQIVVLTLLMLVGGEVFVSFLGL-MLRLKHKHNPEFS-GDRVSSVPIE 145



to top

>HKT1_ORYSA (Q6TPH3) Cation transporter HKT1 (OsHKT1) (Ni-OsHKT1) (Po-OsHKT1)|
          Length = 530

 Score = 60.1 bits (144), Expect = 5e-09
 Identities = 44/140 (31%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
 Frame = +1

Query: 133 FVATKLSYFAKSAQQSMKY---SCQFIC-HTNPLFIQVTYFALISFAGYEALKVLNSQDK 300
           F+  KL  F +  +  + +   + +FI  H +P +IQ++YF LIS  G   L  L   + 
Sbjct: 8   FIHNKLQSFGRIGRYFVNFVVLAHRFIALHIHPFWIQLSYFLLISILGSVLLMFLKPSNP 67

Query: 301 SNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSKQLWILAILMLIGXEVFTSILGLHFXRA 480
                 + +LF              EME  SS Q+ ++ +LML+G EVF S LGL   R 
Sbjct: 68  EFRPGYIDMLFLSTSALTLSSLITIEMEVLSSSQIVVITLLMLLGGEVFVSFLGL-MLRL 126

Query: 481 KFNSXNSFNRRDQISHVDIE 540
                  F+  D++S V IE
Sbjct: 127 NHKHNPEFS-GDKVSSVPIE 145



to top

>HKT7_ORYSA (Q7XPF7) Probable cation transporter HKT7 (OsHKT7)|
          Length = 500

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 40/122 (32%), Positives = 56/122 (45%), Gaps = 3/122 (2%)
 Frame = +1

Query: 220 LFIQVTYFALISFAGYEALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSK 399
           L + V YF  IS  GY  L VL  ++     + +   F              EME FS+ 
Sbjct: 13  LSMHVAYFLAISCLGYGLLGVLKVREPGAAPRRIDRFFTAVSAATVSSMSTVEMEVFSNG 72

Query: 400 QLWILAILMLIGXEVFTSILGLHFXRAKFNSXNSFNRRDQISHVDIESINVTNFD---PT 570
           QL +L +LML+G EVF S++GL    +K  S      R   SH D+   ++   D   PT
Sbjct: 73  QLVVLTVLMLLGGEVFVSLVGLASKWSKLRSDAMDRSRRVESHGDVALADIDGGDVENPT 132

Query: 571 AS 576
           +S
Sbjct: 133 SS 134



to top

>HKT1_ARATH (Q84TI7) Sodium transporter HKT1 (AtHKT1)|
          Length = 506

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 29/82 (35%), Positives = 39/82 (47%)
 Frame = +1

Query: 223 FIQVTYFALISFAGYEALKVLNSQDKSNTLKDLXVLFXXXXXXXXXXXXXXEMEEFSSKQ 402
           F+   YF   SF G+ ALK+   +  S    D  + F              +ME FS+ Q
Sbjct: 23  FLYFIYFLFFSFLGFLALKITKPRTTSRP-HDFDLFFTSVSAITVSSMSTVDMEVFSNTQ 81

Query: 403 LWILAILMLIGXEVFTSILGLH 468
           L  L ILM +G E+FTS L L+
Sbjct: 82  LIFLTILMFLGGEIFTSFLNLY 103



to top

>RK35_SPIOL (P23326) 50S ribosomal protein L35, chloroplast precursor (CL35)|
          Length = 159

 Score = 29.6 bits (65), Expect = 7.2
 Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
 Frame = -1

Query: 449 VNTSLPISIKIAKIQSCLLENSSISTVAMLETVDAETEVNNTXKSFRVFDL-SWELRTFR 273
           +N S   SI  +K+Q  +L+N  ISTV        ++ V+ +  SF VF    ++++T +
Sbjct: 45  LNLSSSSSISSSKVQPIVLKNKRISTV--------DSSVSTSSPSFTVFAAKGYKMKTHK 96

Query: 272 AS 267
           AS
Sbjct: 97  AS 98


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,258,831
Number of Sequences: 219361
Number of extensions: 1361386
Number of successful extensions: 2846
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2844
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5481822624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top