| Clone Name | baal8l01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_470038.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1001 Score = 287 bits (145), Expect = 2e-74 Identities = 244/277 (88%) Strand = Plus / Plus Query: 1 gaacccacccagctaccgctggctctacaactttgttgccgtaaacaagcccaccgatgg 60 ||||||||| |||||||| ||| | |||||||| ||||| ||||||||||| |||||||| Sbjct: 333 gaacccaccaagctaccgatggttatacaacttcgttgctgtaaacaagcctaccgatgg 392 Query: 61 caagctcttcctccgcgctcttggaaaggagaggcaggagcttgcagagcgagtgatgat 120 ||| | ||||| || |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 393 caaagtgttccttcgtgctcttggaaaggagaagcaggagcttgcagagcgagtgatgat 452 Query: 121 aaccaggcttagcttgtacgggaaatggatcaagaagtgcgaccacgcgaagatgtacga 180 ||| |||||| ||||||| | |||||||||||||| || ||||| |||| ||||||||| Sbjct: 453 aactaggcttcacttgtacagcaaatggatcaagaaatgtgaccatgcgatgatgtacga 512 Query: 181 gaagatctcggaggagaacctggagctgatgcgggagaggctcatggagacggtcatctg 240 || ||| || || |||||||||| | ||||||| ||| |||||||||||||||||||||| Sbjct: 513 gaggatatctgacgagaacctggcgttgatgcgagagcggctcatggagacggtcatctg 572 Query: 241 gccaaccgacgacaccaacacggagaagatcggctga 277 |||||| |||||||||||||| |||||||| |||||| Sbjct: 573 gccaacagacgacaccaacactgagaagattggctga 609
>dbj|AK070287.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049O16, full insert sequence Length = 983 Score = 287 bits (145), Expect = 2e-74 Identities = 244/277 (88%) Strand = Plus / Plus Query: 1 gaacccacccagctaccgctggctctacaactttgttgccgtaaacaagcccaccgatgg 60 ||||||||| |||||||| ||| | |||||||| ||||| ||||||||||| |||||||| Sbjct: 463 gaacccaccaagctaccgatggttatacaacttcgttgctgtaaacaagcctaccgatgg 522 Query: 61 caagctcttcctccgcgctcttggaaaggagaggcaggagcttgcagagcgagtgatgat 120 ||| | ||||| || |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 523 caaagtgttccttcgtgctcttggaaaggagaagcaggagcttgcagagcgagtgatgat 582 Query: 121 aaccaggcttagcttgtacgggaaatggatcaagaagtgcgaccacgcgaagatgtacga 180 ||| |||||| ||||||| | |||||||||||||| || ||||| |||| ||||||||| Sbjct: 583 aactaggcttcacttgtacagcaaatggatcaagaaatgtgaccatgcgatgatgtacga 642 Query: 181 gaagatctcggaggagaacctggagctgatgcgggagaggctcatggagacggtcatctg 240 || ||| || || |||||||||| | ||||||| ||| |||||||||||||||||||||| Sbjct: 643 gaggatatctgacgagaacctggcgttgatgcgagagcggctcatggagacggtcatctg 702 Query: 241 gccaaccgacgacaccaacacggagaagatcggctga 277 |||||| |||||||||||||| |||||||| |||||| Sbjct: 703 gccaacagacgacaccaacactgagaagattggctga 739
>dbj|AK060962.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-A06, full insert sequence Length = 1220 Score = 287 bits (145), Expect = 2e-74 Identities = 244/277 (88%) Strand = Plus / Plus Query: 1 gaacccacccagctaccgctggctctacaactttgttgccgtaaacaagcccaccgatgg 60 ||||||||| |||||||| ||| | |||||||| ||||| ||||||||||| |||||||| Sbjct: 565 gaacccaccaagctaccgatggttatacaacttcgttgctgtaaacaagcctaccgatgg 624 Query: 61 caagctcttcctccgcgctcttggaaaggagaggcaggagcttgcagagcgagtgatgat 120 ||| | ||||| || |||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 625 caaagtgttccttcgtgctcttggaaaggagaagcaggagcttgcagagcgagtgatgat 684 Query: 121 aaccaggcttagcttgtacgggaaatggatcaagaagtgcgaccacgcgaagatgtacga 180 ||| |||||| ||||||| | |||||||||||||| || ||||| |||| ||||||||| Sbjct: 685 aactaggcttcacttgtacagcaaatggatcaagaaatgtgaccatgcgatgatgtacga 744 Query: 181 gaagatctcggaggagaacctggagctgatgcgggagaggctcatggagacggtcatctg 240 || ||| || || |||||||||| | ||||||| ||| |||||||||||||||||||||| Sbjct: 745 gaggatatctgacgagaacctggcgttgatgcgagagcggctcatggagacggtcatctg 804 Query: 241 gccaaccgacgacaccaacacggagaagatcggctga 277 |||||| |||||||||||||| |||||||| |||||| Sbjct: 805 gccaacagacgacaccaacactgagaagattggctga 841
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 161 gaccacgcgaagatgtacgagaagatctcggaggagaacctggagctgatgcgggagagg 220 ||||| |||| ||||||||||| ||| || || |||||||||| | ||||||| ||| || Sbjct: 33469162 gaccatgcgatgatgtacgagaggatatctgacgagaacctggcgttgatgcgagagcgg 33469221 Query: 221 ctcatggagacggtcatctggccaaccgacgacaccaacacggagaagatcggctga 277 |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||| Sbjct: 33469222 ctcatggagacggtcatctggccaacagacgacaccaacactgagaagattggctga 33469278 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 87 aggagaggcaggagcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaat 146 |||||| |||||||||||||||||||||||||||||| |||||| ||||||| | |||| Sbjct: 33469003 aggagaagcaggagcttgcagagcgagtgatgataactaggcttcacttgtacagcaaat 33469062 Query: 147 ggatcaag 154 |||||||| Sbjct: 33469063 ggatcaag 33469070 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 35 gttgccgtaaacaagcccaccgatggcaagctcttcctccgcgctcttggaaagg 89 ||||| ||||||||||| ||||||||||| | ||||| || ||||||||||||| Sbjct: 33468843 gttgctgtaaacaagcctaccgatggcaaagtgttccttcgtgctcttggaaagg 33468897
>gb|AC135958.2| Oryza sativa chromosome 3 BAC OSJNBa0059E14 genomic sequence, complete sequence Length = 154555 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Minus Query: 161 gaccacgcgaagatgtacgagaagatctcggaggagaacctggagctgatgcgggagagg 220 ||||| |||| ||||||||||| ||| || || |||||||||| | ||||||| ||| || Sbjct: 28949 gaccatgcgatgatgtacgagaggatatctgacgagaacctggcgttgatgcgagagcgg 28890 Query: 221 ctcatggagacggtcatctggccaaccgacgacaccaacacggagaagatcggctga 277 |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||| Sbjct: 28889 ctcatggagacggtcatctggccaacagacgacaccaacactgagaagattggctga 28833 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 87 aggagaggcaggagcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaat 146 |||||| |||||||||||||||||||||||||||||| |||||| ||||||| | |||| Sbjct: 29108 aggagaagcaggagcttgcagagcgagtgatgataactaggcttcacttgtacagcaaat 29049 Query: 147 ggatcaag 154 |||||||| Sbjct: 29048 ggatcaag 29041 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 35 gttgccgtaaacaagcccaccgatggcaagctcttcctccgcgctcttggaaagg 89 ||||| ||||||||||| ||||||||||| | ||||| || ||||||||||||| Sbjct: 29268 gttgctgtaaacaagcctaccgatggcaaagtgttccttcgtgctcttggaaagg 29214
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 129 bits (65), Expect = 1e-26 Identities = 104/117 (88%) Strand = Plus / Plus Query: 161 gaccacgcgaagatgtacgagaagatctcggaggagaacctggagctgatgcgggagagg 220 ||||| |||| ||||||||||| ||| || || |||||||||| | ||||||| ||| || Sbjct: 33559672 gaccatgcgatgatgtacgagaggatatctgacgagaacctggcgttgatgcgagagcgg 33559731 Query: 221 ctcatggagacggtcatctggccaaccgacgacaccaacacggagaagatcggctga 277 |||||||||||||||||||||||||| |||||||||||||| |||||||| |||||| Sbjct: 33559732 ctcatggagacggtcatctggccaacagacgacaccaacactgagaagattggctga 33559788 Score = 87.7 bits (44), Expect = 3e-14 Identities = 62/68 (91%) Strand = Plus / Plus Query: 87 aggagaggcaggagcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaat 146 |||||| |||||||||||||||||||||||||||||| |||||| ||||||| | |||| Sbjct: 33559513 aggagaagcaggagcttgcagagcgagtgatgataactaggcttcacttgtacagcaaat 33559572 Query: 147 ggatcaag 154 |||||||| Sbjct: 33559573 ggatcaag 33559580 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Plus Query: 35 gttgccgtaaacaagcccaccgatggcaagctcttcctccgcgctcttggaaagg 89 ||||| ||||||||||| ||||||||||| | ||||| || ||||||||||||| Sbjct: 33559353 gttgctgtaaacaagcctaccgatggcaaagtgttccttcgtgctcttggaaagg 33559407
>gb|AY107170.1| Zea mays PCO088271 mRNA sequence Length = 637 Score = 125 bits (63), Expect = 2e-25 Identities = 132/156 (84%) Strand = Plus / Plus Query: 1 gaacccacccagctaccgctggctctacaactttgttgccgtaaacaagcccaccgatgg 60 |||||| || |||||||||||| |||||||||| || || || |||||||| ||||| || Sbjct: 481 gaacccgccgagctaccgctggttctacaacttcgtcgctgtcaacaagcctaccgacgg 540 Query: 61 caagctcttcctccgcgctcttggaaaggagaggcaggagcttgcagagcgagtgatgat 120 ||||| |||||||| ||||| || ||||||||||||||||| |||||| |||||| | Sbjct: 541 caagcatttcctccgtgctctcggcaaggagaggcaggagctcgcagagnnngtgatggt 600 Query: 121 aaccaggcttagcttgtacgggaaatggatcaagaa 156 ||||||||| | |||||||||||||||| ||||| Sbjct: 601 caccaggcttcacctgtacgggaaatggataaagaa 636
>ref|NM_121991.2| Arabidopsis thaliana unknown protein AT5G19855 mRNA, complete cds Length = 941 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 68 ttcctccgcgctcttggaaaggagaggcaggagcttgcagagcgagtgatgataaccagg 127 |||||||| || || || |||||||| |||||||||||||| |||||||||| || | Sbjct: 547 ttcctccgtgccctcggcaaggagagtcaggagcttgcagaaagagtgatgatcacgcgt 606 Query: 128 cttagcttgtacgggaaatggatcaagaagtgcgaccacgcgaagat 174 ||| |||||| || |||||||||||||| |||||||| | |||||| Sbjct: 607 cttcacttgtatggcaaatggatcaagaaatgcgaccatgggaagat 653
>gb|BT005149.1| Arabidopsis thaliana clone U20491 unknown protein (At5g19855) mRNA, complete cds Length = 643 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 68 ttcctccgcgctcttggaaaggagaggcaggagcttgcagagcgagtgatgataaccagg 127 |||||||| || || || |||||||| |||||||||||||| |||||||||| || | Sbjct: 412 ttcctccgtgccctcggcaaggagagtcaggagcttgcagaaagagtgatgatcacgcgt 471 Query: 128 cttagcttgtacgggaaatggatcaagaagtgcgaccacgcgaagat 174 ||| |||||| || |||||||||||||| |||||||| | |||||| Sbjct: 472 cttcacttgtatggcaaatggatcaagaaatgcgaccatgggaagat 518
>gb|BT004014.1| Arabidopsis thaliana clone RAFL15-10-J17 (R20491) unknown protein (At5g19855) mRNA, complete cds Length = 926 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 68 ttcctccgcgctcttggaaaggagaggcaggagcttgcagagcgagtgatgataaccagg 127 |||||||| || || || |||||||| |||||||||||||| |||||||||| || | Sbjct: 514 ttcctccgtgccctcggcaaggagagtcaggagcttgcagaaagagtgatgatcacgcgt 573 Query: 128 cttagcttgtacgggaaatggatcaagaagtgcgaccacgcgaagat 174 ||| |||||| || |||||||||||||| |||||||| | |||||| Sbjct: 574 cttcacttgtatggcaaatggatcaagaaatgcgaccatgggaagat 620
>gb|AY088169.1| Arabidopsis thaliana clone 42402 mRNA, complete sequence Length = 939 Score = 69.9 bits (35), Expect = 8e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 68 ttcctccgcgctcttggaaaggagaggcaggagcttgcagagcgagtgatgataaccagg 127 |||||||| || || || |||||||| |||||||||||||| |||||||||| || | Sbjct: 547 ttcctccgtgccctcggcaaggagagtcaggagcttgcagaaagagtgatgatcacgcgt 606 Query: 128 cttagcttgtacgggaaatggatcaagaagtgcgaccacgcgaagat 174 ||| |||||| || |||||||||||||| |||||||| | |||||| Sbjct: 607 cttcacttgtatggcaaatggatcaagaaatgcgaccatgggaagat 653
>ref|XM_478766.1| Oryza sativa (japonica cultivar-group), mRNA Length = 821 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 133 cttgtacgggaaatggatcaagaagtgcgaccacgcgaagatgtacgagaagatctcgga 192 ||||||| | |||||||||||||| || ||||| || || |||||||||||||| ||| | Sbjct: 499 cttgtacagcaaatggatcaagaaatgtgaccatgcaaaaatgtacgagaagatttcgaa 558 Query: 193 ggagaacctggag 205 ||||| |||||| Sbjct: 559 tgagaatctggag 571
>dbj|AK067599.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109B01, full insert sequence Length = 820 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Plus Query: 133 cttgtacgggaaatggatcaagaagtgcgaccacgcgaagatgtacgagaagatctcgga 192 ||||||| | |||||||||||||| || ||||| || || |||||||||||||| ||| | Sbjct: 498 cttgtacagcaaatggatcaagaaatgtgaccatgcaaaaatgtacgagaagatttcgaa 557 Query: 193 ggagaacctggag 205 ||||| |||||| Sbjct: 558 tgagaatctggag 570
>gb|AF296836.1|F28I16 Arabidopsis thaliana BAC F28I16 Length = 84334 Score = 48.1 bits (24), Expect = 0.030 Identities = 57/68 (83%) Strand = Plus / Minus Query: 87 aggagaggcaggagcttgcagagcgagtgatgataaccaggcttagcttgtacgggaaat 146 ||||||| |||||||||||||| |||||||||| || | ||| |||||| || |||| Sbjct: 1188 aggagagtcaggagcttgcagaaagagtgatgatcacgcgtcttcacttgtatggcaaat 1129 Query: 147 ggatcaag 154 |||||||| Sbjct: 1128 ggatcaag 1121
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 189 cggaggagaacctggagctgatg 211 ||||||||||||||||||||||| Sbjct: 2436946 cggaggagaacctggagctgatg 2436924
>gb|L77117.1| Methanocaldococcus jannaschii DSM 2661, complete genome Length = 1664970 Score = 44.1 bits (22), Expect = 0.46 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 ggaggagaacctggagctgatg 211 |||||||||||||||||||||| Sbjct: 314993 ggaggagaacctggagctgatg 315014
>gb|AY020312.1| Oryza sativa microsatellite MRG2637 containing (GA)X13, genomic sequence Length = 226 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 ctggagctgatgcgggagagg 220 ||||||||||||||||||||| Sbjct: 44 ctggagctgatgcgggagagg 24
>emb|BX957235.12| Zebrafish DNA sequence from clone DKEY-84K17 in linkage group 17, complete sequence Length = 171764 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 389 tcaaacatgtgtatataatgt 409 ||||||||||||||||||||| Sbjct: 9681 tcaaacatgtgtatataatgt 9661
>gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosome 18, complete sequence Length = 195911 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 80 cttggaaaggagaggcaggag 100 ||||||||||||||||||||| Sbjct: 75505 cttggaaaggagaggcaggag 75485
>gb|AC165343.3| Mus musculus BAC clone RP23-476C24 from chromosome 17, complete sequence Length = 190724 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 actatgcatgcatgcacgcac 381 ||||||||||||||||||||| Sbjct: 91801 actatgcatgcatgcacgcac 91781
>emb|AL607001.4|OSJN00128 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0088I22, complete sequence Length = 164572 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 200 ctggagctgatgcgggagagg 220 ||||||||||||||||||||| Sbjct: 33118 ctggagctgatgcgggagagg 33138
>gb|AC164561.2| Mus musculus BAC clone RP23-187G5 from chromosome 12, complete sequence Length = 210186 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 tatgcatgcatgcacgcacga 383 ||||||||||||||||||||| Sbjct: 20402 tatgcatgcatgcacgcacga 20422
>dbj|AK055547.1| Homo sapiens cDNA FLJ30985 fis, clone HHDPC2000462 Length = 2386 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 189 cggaggagaacctggagctga 209 ||||||||||||||||||||| Sbjct: 666 cggaggagaacctggagctga 646
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 ctggagctgatgcgggagagg 220 ||||||||||||||||||||| Sbjct: 28757840 ctggagctgatgcgggagagg 28757820 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tatgcatgcatgcacgcacg 382 |||||||||||||||||||| Sbjct: 19360677 tatgcatgcatgcacgcacg 19360696
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 ctggagctgatgcgggagagg 220 ||||||||||||||||||||| Sbjct: 2075093 ctggagctgatgcgggagagg 2075073 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 ttgagtcaaacatgtgtatataat 407 ||||| |||||||||||||||||| Sbjct: 19030435 ttgagacaaacatgtgtatataat 19030412
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 ctatgcatgcatgcacgcacg 382 ||||||||||||||||||||| Sbjct: 22090159 ctatgcatgcatgcacgcacg 22090139
>dbj|AP005116.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0703B01 Length = 137445 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 362 ctatgcatgcatgcacgcacg 382 ||||||||||||||||||||| Sbjct: 64058 ctatgcatgcatgcacgcacg 64038
>dbj|AP003708.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0041F13 Length = 163230 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 200 ctggagctgatgcgggagagg 220 ||||||||||||||||||||| Sbjct: 95955 ctggagctgatgcgggagagg 95935
>emb|CT033780.10| Mouse DNA sequence from clone RP24-329E14 on chromosome 12, complete sequence Length = 205515 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 363 tatgcatgcatgcacgcacga 383 ||||||||||||||||||||| Sbjct: 102661 tatgcatgcatgcacgcacga 102681
>ref|XM_520379.1| PREDICTED: Pan troglodytes LOC464874 (LOC464874), mRNA Length = 2279 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cggaggagaacctggagctg 208 |||||||||||||||||||| Sbjct: 1330 cggaggagaacctggagctg 1349
>gb|AC158556.9| Mus musculus chromosome 15, clone RP23-140F20, complete sequence Length = 203053 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 396 tgtgtatataatgtacgtatgtga 419 ||||||||||||||| |||||||| Sbjct: 80004 tgtgtatataatgtatgtatgtga 79981
>gb|AC141880.3| Mus musculus BAC clone RP24-220N1 from chromosome 15, complete sequence Length = 185646 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 cttggaaaggagaggcagga 99 |||||||||||||||||||| Sbjct: 127924 cttggaaaggagaggcagga 127943
>gb|AC133099.3| Mus musculus BAC clone RP23-90K8 from chromosome 19, complete sequence Length = 224638 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 gctcttggaaaggagaggcaggag 100 |||||||||||| ||||||||||| Sbjct: 58043 gctcttggaaagcagaggcaggag 58020
>emb|Z78541.1|CEF19D8 Caenorhabditis elegans Cosmid F19D8, complete sequence Length = 29400 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 316 acttcatcaattaattagctcatc 339 |||||||||||||||||| ||||| Sbjct: 1168 acttcatcaattaattagatcatc 1145
>gb|AC124724.4| Mus musculus BAC clone RP23-446L16 from chromosome 19, complete sequence Length = 179952 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttggaaaggagaggcaggag 100 |||||||||||||||||||| Sbjct: 162761 ttggaaaggagaggcaggag 162780
>gb|BC064582.1| Homo sapiens KIAA1984, mRNA (cDNA clone IMAGE:5742861), complete cds Length = 1822 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cggaggagaacctggagctg 208 |||||||||||||||||||| Sbjct: 1029 cggaggagaacctggagctg 1048
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cggaggagaacctggagctg 208 |||||||||||||||||||| Sbjct: 84597 cggaggagaacctggagctg 84616
>gb|AC087722.2| Rattus norvegicus strain Brown Norway clone RP31-198L13, complete sequence Length = 150936 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 gctcttggaaaggagaggcaggag 100 |||||||| ||||||||||||||| Sbjct: 97677 gctcttgggaaggagaggcaggag 97654
>ref|XM_779451.1| PREDICTED: Strongylocentrotus purpuratus similar to potassium voltage-gated channel, subfamily H, member 8 (LOC579331), mRNA Length = 3177 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 252 acaccaacacggagaagatc 271 |||||||||||||||||||| Sbjct: 1307 acaccaacacggagaagatc 1326
>emb|BX294155.1| Pirellula sp. strain 1 complete genome; segment 23/24 Length = 306550 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 33 ttgttgccgtaaacaagccc 52 |||||||||||||||||||| Sbjct: 104061 ttgttgccgtaaacaagccc 104042
>emb|AL731600.3|OSJN00243 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0055C08, complete sequence Length = 145670 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tatgcatgcatgcacgcacg 382 |||||||||||||||||||| Sbjct: 142509 tatgcatgcatgcacgcacg 142528
>emb|AL606621.3|OSJN00054 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072K14, complete sequence Length = 139855 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tatgcatgcatgcacgcacg 382 |||||||||||||||||||| Sbjct: 11929 tatgcatgcatgcacgcacg 11948
>gb|AC023102.6| Homo sapiens chromosome 8, clone RP11-414L17, complete sequence Length = 175263 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tatgcatgcatgcacgcacg 382 |||||||||||||||||||| Sbjct: 164486 tatgcatgcatgcacgcacg 164505
>dbj|AK094220.1| Homo sapiens cDNA FLJ36901 fis, clone BRACE2002206 Length = 2124 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cggaggagaacctggagctg 208 |||||||||||||||||||| Sbjct: 464 cggaggagaacctggagctg 483
>dbj|AK092639.1| Homo sapiens cDNA FLJ35320 fis, clone PROST2012007 Length = 2323 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cggaggagaacctggagctg 208 |||||||||||||||||||| Sbjct: 1301 cggaggagaacctggagctg 1320
>dbj|AK090683.1| Homo sapiens cDNA FLJ33364 fis, clone BRACE2005448 Length = 1555 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cggaggagaacctggagctg 208 |||||||||||||||||||| Sbjct: 619 cggaggagaacctggagctg 638
>gb|AC112173.3| Homo sapiens chromosome 5 clone CTD-2275D10, complete sequence Length = 125551 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 364 atgcatgcatgcacgcacgattga 387 ||||||||||||||||| |||||| Sbjct: 19251 atgcatgcatgcacgcaggattga 19274
>ref|NM_001039374.3| Homo sapiens KIAA1984 (KIAA1984), mRNA Length = 1740 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cggaggagaacctggagctg 208 |||||||||||||||||||| Sbjct: 1031 cggaggagaacctggagctg 1050
>gb|AC113143.3| Homo sapiens chromosome 8, clone RP11-33I11, complete sequence Length = 157672 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 363 tatgcatgcatgcacgcacg 382 |||||||||||||||||||| Sbjct: 10828 tatgcatgcatgcacgcacg 10847
>gb|AC093251.2| Homo sapiens chromosome 5 clone RP11-156N15, complete sequence Length = 62147 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 364 atgcatgcatgcacgcacgattga 387 ||||||||||||||||| |||||| Sbjct: 3573 atgcatgcatgcacgcaggattga 3550
>dbj|AK154298.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630016D06 product:unclassifiable, full insert sequence Length = 4040 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 atgcatgcatgcacgcacga 383 |||||||||||||||||||| Sbjct: 2708 atgcatgcatgcacgcacga 2727
>gb|AC159001.2| Mus musculus BAC clone RP24-221A23 from chromosome 9, complete sequence Length = 161507 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gctcttggaaaggagaggcaggag 100 |||||||||||| ||||||||||| Sbjct: 157617 gctcttggaaagtagaggcaggag 157640
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tatgcatgcatgcacgcacg 382 |||||||||||||||||||| Sbjct: 24130019 tatgcatgcatgcacgcacg 24130000
>gb|AC154685.2| Mus musculus BAC clone RP24-321G16 from chromosome 17, complete sequence Length = 162362 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gctcttggaaaggagaggcaggag 100 |||||||||||| ||||||||||| Sbjct: 120094 gctcttggaaagcagaggcaggag 120117
>dbj|AB074447.1| Macaca fascicularis testis cDNA clone:QtsA-19877, similar to human KIAA1984 protein (KIAA1984), mRNA, NM_032874 Length = 2296 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cggaggagaacctggagctg 208 |||||||||||||||||||| Sbjct: 1021 cggaggagaacctggagctg 1040
>gb|AC126690.5| Mus musculus BAC clone RP23-189K24 from chromosome 14, complete sequence Length = 212894 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gctcttggaaaggagaggcaggag 100 |||||||| ||||||||||||||| Sbjct: 107445 gctcttgggaaggagaggcaggag 107468
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 57 atggcaagctcttcctccgc 76 |||||||||||||||||||| Sbjct: 490681 atggcaagctcttcctccgc 490700
>dbj|AP004730.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0009J19 Length = 156988 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 ttgagtcaaacatgtgtatataat 407 ||||| |||||||||||||||||| Sbjct: 123105 ttgagacaaacatgtgtatataat 123082
>dbj|AP004328.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OJ1616_B03 Length = 96081 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 384 ttgagtcaaacatgtgtatataat 407 ||||| |||||||||||||||||| Sbjct: 27919 ttgagacaaacatgtgtatataat 27896
>gb|AC108814.22| Mus musculus chromosome 19, clone RP23-235H21, complete sequence Length = 196556 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 ttggaaaggagaggcaggag 100 |||||||||||||||||||| Sbjct: 56948 ttggaaaggagaggcaggag 56967
>emb|BX469898.9| Zebrafish DNA sequence from clone DKEY-180H12 in linkage group 18, complete sequence Length = 185729 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 atgcatgcatgcacgcacga 383 |||||||||||||||||||| Sbjct: 56073 atgcatgcatgcacgcacga 56092
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tatgcatgcatgcacgcacg 382 |||||||||||||||||||| Sbjct: 24058225 tatgcatgcatgcacgcacg 24058206
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 363 tatgcatgcatgcacgcacg 382 |||||||||||||||||||| Sbjct: 14710 tatgcatgcatgcacgcacg 14691
>emb|CT025608.12| Mouse DNA sequence from clone RP23-292F17 on chromosome 9, complete sequence Length = 200204 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 77 gctcttggaaaggagaggcaggag 100 |||||||||||| ||||||||||| Sbjct: 154419 gctcttggaaagtagaggcaggag 154396
>emb|AL772358.6| Mouse DNA sequence from clone RP23-397K2 on chromosome 4, complete sequence Length = 173518 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 atgcatgcatgcacgcacga 383 |||||||||||||||||||| Sbjct: 87677 atgcatgcatgcacgcacga 87658
>emb|CT010472.8| Mouse DNA sequence from clone RP23-37H11 on chromosome 13, complete sequence Length = 182622 Score = 40.1 bits (20), Expect = 7.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 77 gctcttggaaaggagaggcaggag 100 ||||||||||||| |||||||||| Sbjct: 137369 gctcttggaaaggtgaggcaggag 137392
>dbj|AB075864.1| Homo sapiens mRNA for KIAA1984 protein Length = 4207 Score = 40.1 bits (20), Expect = 7.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 cggaggagaacctggagctg 208 |||||||||||||||||||| Sbjct: 1144 cggaggagaacctggagctg 1163 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,611,080 Number of Sequences: 3902068 Number of extensions: 3611080 Number of successful extensions: 74843 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 69 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74317 Number of HSP's gapped (non-prelim): 517 length of query: 532 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 509 effective length of database: 17,143,297,704 effective search space: 8725938531336 effective search space used: 8725938531336 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)