ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8k16 |
|---|---|
| Clone Library Name | barley_pub |
>SLSG3_BRAOL (P17840) S-locus-specific glycoprotein S13 precursor (SLSG-13)| (Fragment) Length = 434 Score = 104 bits (259), Expect = 2e-22 Identities = 66/171 (38%), Positives = 99/171 (57%), Gaps = 8/171 (4%) Frame = +1 Query: 88 EVSMGKTLPVIFTLLLLICLCKSDDRLTPAKPLLPGDK--LVSNNGIFALGFFSPDPENS 261 ++S + ++F +L+L S + L+ + L LVS +F LGFF + + Sbjct: 8 DISYTLSFLLVFFVLILFRPAFSINTLSSTESLTISSNRTLVSPGNVFELGFF----KTT 63 Query: 262 RAANSYLGIWYHDIPERTYVWVANRDNPIGSGLSGKLVLTNTSDLVLSDSKGRVLWRTTN 441 ++ YLGIWY P RTYVWVANRDNP+ + + G L ++ ++LVL D + +W T Sbjct: 64 SSSRWYLGIWYKKFPYRTYVWVANRDNPLSNDI-GTLKISG-NNLVLLDHSNKSVWST-- 119 Query: 442 NVTTGGDGA--VALLLEAGNFVLQSRNFTQ----IWQSYDHPTDTILPSFK 576 NVT G + + VA LL+ GNFV++ N +WQS+D+PTDT+LP K Sbjct: 120 NVTRGNERSPVVAELLDNGNFVMRDSNSNNASQFLWQSFDYPTDTLLPEMK 170
>SLSG2_BRAOA (P22553) S-locus-specific glycoprotein BS29-2 precursor| Length = 435 Score = 99.8 bits (247), Expect = 5e-21 Identities = 59/129 (45%), Positives = 75/129 (58%), Gaps = 4/129 (3%) Frame = +1 Query: 202 LVSNNGIFALGFFSPDPENSRAANSYLGIWYHDIPERTYVWVANRDNPIGSGLSGKLVLT 381 LVS + LGFF P +SR YLG+WY + ERTYVWVANRDNP+ + G L ++ Sbjct: 48 LVSPGNVLELGFFRT-PSSSRW---YLGMWYKKLSERTYVWVANRDNPLSCSI-GTLKIS 102 Query: 382 NTSDLVLSDSKGRVLWRTTNNVTTGGDGAVALLLEAGNFVLQSRNFTQ----IWQSYDHP 549 N +LVL D + LW T + VA LL GNFVL+ N +WQS+D+P Sbjct: 103 N-MNLVLLDHSNKSLWSTNHTRGNERSPVVAELLANGNFVLRDSNKNDRSGFLWQSFDYP 161 Query: 550 TDTILPSFK 576 TDT+LP K Sbjct: 162 TDTLLPEMK 170
>SLSG6_BRAOL (P07761) S-locus-specific glycoprotein S6 precursor (SLSG-6)| Length = 436 Score = 96.3 bits (238), Expect = 6e-20 Identities = 62/162 (38%), Positives = 92/162 (56%), Gaps = 8/162 (4%) Frame = +1 Query: 115 VIFTLLLLICLCKSDDRLTPAKPLLPGDK--LVSNNGIFALGFFSPDPENSRAANSYLGI 288 ++F +L+L C S + L+ + L LVS F LGFF + ++ YLGI Sbjct: 18 LVFFVLILFCPAFSINTLSSTESLRISSNRTLVSPGNNFELGFF----RTNSSSRWYLGI 73 Query: 289 WYHDIPERTYVWVANRDNPIGSGLSGKLVLTNTSDLVLSDSKGRVLWRTTNNVTTGGD-- 462 WY + +RTYVWVANRDNP+ + + G L ++ ++LVL + +W T N+T G + Sbjct: 74 WYKKLLDRTYVWVANRDNPLSNAI-GTLKISG-NNLVLLGHTNKSVWST--NLTRGNERL 129 Query: 463 GAVALLLEAGNFVLQSRNFTQ----IWQSYDHPTDTILPSFK 576 VA LL GNFV++ + +WQS+D+PTDT+LP K Sbjct: 130 PVVAELLSNGNFVMRDSSNNDASEYLWQSFDYPTDTLLPEMK 171
>SRK6_BRAOE (Q09092) Putative serine/threonine-protein kinase receptor| precursor (EC 2.7.11.1) (S-receptor kinase) (SRK) Length = 849 Score = 94.4 bits (233), Expect = 2e-19 Identities = 58/131 (44%), Positives = 81/131 (61%), Gaps = 6/131 (4%) Frame = +1 Query: 202 LVSNNGIFALGFFSPDPENSRAANSYLGIWYHDIPERTYVWVANRDNPIGSGLSGKLVLT 381 LVS IF +GFF NSR YLG+WY + +RTYVWVANRDNP+ + + G L ++ Sbjct: 50 LVSPGSIFEVGFFRT---NSRW---YLGMWYKKVSDRTYVWVANRDNPLSNAI-GTLKIS 102 Query: 382 NTSDLVLSDSKGRVLWRTTNNVTTGGDGA--VALLLEAGNFVLQSRNFTQ----IWQSYD 543 ++LVL D + +W T N+T G + + VA LL GNFV++ + +WQS+D Sbjct: 103 G-NNLVLLDHSNKPVWWT--NLTRGNERSPVVAELLANGNFVMRDSSNNDASEYLWQSFD 159 Query: 544 HPTDTILPSFK 576 +PTDT+LP K Sbjct: 160 YPTDTLLPEMK 170
>SLSG4_BRAOL (P17841) S-locus-specific glycoprotein S14 precursor (SLSG-14)| (Fragment) Length = 434 Score = 93.6 bits (231), Expect = 4e-19 Identities = 55/131 (41%), Positives = 77/131 (58%), Gaps = 6/131 (4%) Frame = +1 Query: 202 LVSNNGIFALGFFSPDPENSRAANSYLGIWYHDIPERTYVWVANRDNPIGSGLSGKLVLT 381 LVS +F LGFF + ++ YLGIWY + +RTYVWVANRDNP+ S + G L ++ Sbjct: 46 LVSPGNVFELGFF----RTNSSSRWYLGIWYKKVSDRTYVWVANRDNPLSSSI-GTLKIS 100 Query: 382 NTSDLVLSDSKGRVLWRTTNNVTTGGDGA--VALLLEAGNFVLQSRNFTQ----IWQSYD 543 + L D + +W T N+T G + + VA +L GNFV++ N +WQS+D Sbjct: 101 GNNPCHL-DHSNKSVWST--NLTRGNERSPVVADVLANGNFVMRDSNNNDASGFLWQSFD 157 Query: 544 HPTDTILPSFK 576 PTDT+LP K Sbjct: 158 FPTDTLLPEMK 168
>SLSG1_BRAOA (P22552) S-locus-specific glycoprotein BS29-1 precursor| Length = 444 Score = 87.4 bits (215), Expect = 3e-17 Identities = 63/163 (38%), Positives = 83/163 (50%), Gaps = 9/163 (5%) Frame = +1 Query: 115 VIFTLLLLICLCKSDDRLTPAKPLLPGDK--LVSNNGIFALGFFSPDPENSRAANS--YL 282 + F +L+L S + L+P + L LVS +F LGFF NS YL Sbjct: 15 LFFVILVLFPHVFSTNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYL 74 Query: 283 GIWYHDIP-ERTYVWVANRDNPIGSGLSGKLVLTNTSDLVLSDSKGRVLWRTTNNVTTGG 459 GIWY RTYVWVANRDN + + + G L +++ S LVL D +W +TN Sbjct: 75 GIWYKTTSGHRTYVWVANRDNALHNSM-GTLKISHAS-LVLLDHSNTPVW-STNFTGVAH 131 Query: 460 DGAVALLLEAGNFVLQSRNFTQI----WQSYDHPTDTILPSFK 576 A LL GNFVL+ T + WQS+D+P DT+LP K Sbjct: 132 LPVTAELLANGNFVLRDSKTTALDRFMWQSFDYPVDTLLPEMK 174
>SLSG0_BRAOA (P22551) S-locus-specific glycoprotein precursor| Length = 444 Score = 85.5 bits (210), Expect = 1e-16 Identities = 62/161 (38%), Positives = 81/161 (50%), Gaps = 9/161 (5%) Frame = +1 Query: 121 FTLLLLICLCKSDDRLTPAKPLLPGDK--LVSNNGIFALGFFSPDPENSRAANS--YLGI 288 F +L+L S + L+P + L LVS +F LGFF NS YLGI Sbjct: 17 FVILVLFPHVFSTNTLSPNEALTISSNKTLVSPGDVFELGFFKTTTRNSPDGTDRWYLGI 76 Query: 289 WYHDIP-ERTYVWVANRDNPIGSGLSGKLVLTNTSDLVLSDSKGRVLWRTTNNVTTGGDG 465 WY RTYVWVANRDN + + + G L +++ S LVL D +W +TN Sbjct: 77 WYKTTSGHRTYVWVANRDNALHNSM-GTLKISHAS-LVLLDHSNTPVW-STNFTGVAHLP 133 Query: 466 AVALLLEAGNFVLQSRNFTQI----WQSYDHPTDTILPSFK 576 A LL GNFVL+ + WQS+D+P DT+LP K Sbjct: 134 VTAELLANGNFVLRDSKTNDLDRFMWQSFDYPVDTLLPEMK 174
>KPRO_MAIZE (P17801) Putative receptor protein kinase ZmPK1 precursor (EC| 2.7.11.1) Length = 817 Score = 69.3 bits (168), Expect = 7e-12 Identities = 45/128 (35%), Positives = 65/128 (50%), Gaps = 5/128 (3%) Frame = +1 Query: 202 LVSNNGIFALGFFSPDPENSRAANSYLGIWYHDIP-----ERTYVWVANRDNPIGSGLSG 366 L S++G F+ GF+ E A ++ +WY +T VW AN D P+ + S Sbjct: 48 LQSSDGTFSSGFY----EVYTHAFTF-SVWYSKTEAAAANNKTIVWSANPDRPVHARRSA 102 Query: 367 KLVLTNTSDLVLSDSKGRVLWRTTNNVTTGGDGAVALLLEAGNFVLQSRNFTQIWQSYDH 546 L L ++VL+D G +WR N TG A LL+ GN V++ +WQS+D Sbjct: 103 -LTLQKDGNMVLTDYDGAAVWRADGNNFTGVQRA--RLLDTGNLVIEDSGGNTVWQSFDS 159 Query: 547 PTDTILPS 570 PTDT LP+ Sbjct: 160 PTDTFLPT 167
>EP1G_DAUCA (Q39688) Epidermis-specific secreted glycoprotein EP1 precursor| (52/54-kDa medium protein) Length = 389 Score = 57.4 bits (137), Expect = 3e-08 Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 1/84 (1%) Frame = +1 Query: 316 YVWVANRDNPIGSGLSGKLVLTNTSDLVLSDSKGRVLWRTTNNVTTGGDGAVAL-LLEAG 492 +VW ANR NP+ + L +LVL+ S G+V W+T+ T G V L +L G Sbjct: 90 WVWEANRGNPVDENAT--LTFGPDGNLVLARSNGQVAWQTS----TANKGVVGLKILPNG 143 Query: 493 NFVLQSRNFTQIWQSYDHPTDTIL 564 N VL +WQS+D PTDT+L Sbjct: 144 NMVLYDSKGKFLWQSFDTPTDTLL 167
>GLT1_SCHPO (Q9C102) Putative glutamate synthase [NADPH] (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2111 Score = 33.1 bits (74), Expect = 0.58 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%) Frame = +1 Query: 352 SGLSGKLVLTNTSD-LVLSDSKGRVLWRTTNNVTTGGDGAVALLLEA 489 +GL +L + T LVL+D +GRV+ +T + TG D A+A LL A Sbjct: 1131 AGLPWELGVAETHQTLVLNDLRGRVVIQTDGQIRTGRDVAIACLLGA 1177
>GLT1_YEAST (Q12680) Glutamate synthase [NADPH] precursor (EC 1.4.1.13)| (NADPH-GOGAT) Length = 2144 Score = 32.3 bits (72), Expect = 0.99 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%) Frame = +1 Query: 352 SGLSGKLVLTNTSD-LVLSDSKGRVLWRTTNNVTTGGDGAVALLLEAGNFVL 504 +GL +L L T LVL+D + V+ +T + TG D AVA+LL A +F L Sbjct: 1123 AGLPWELGLAETHQTLVLNDLRRNVVVQTDGQLRTGFDIAVAVLLGAESFTL 1174
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 32.3 bits (72), Expect = 0.99 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 2/121 (1%) Frame = +2 Query: 200 SSSQTMAFSLLASSPRTQRTLGPQTLT*AYGTTTSRRGHMCGWPTATTQSAAVCRGSWF* 379 +++ T SL SSP T RT + GTT H+ T T+ + A G+ Sbjct: 3949 TTATTHGRSLSPSSPHTVRTAWTSATSGTLGTT-----HITEPSTGTSHTPAATTGTTTT 4003 Query: 380 QTPLISSCQTPKAVSFGGRRTTSPPA--VTGPWRCCSRRGTLSSSRAISRRYGRAMITRP 553 TP +SS R T SPP+ T P + T +++ R + ++P Sbjct: 4004 STPALSSPHP------SSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSQP 4057 Query: 554 T 556 T Sbjct: 4058 T 4058 Score = 32.3 bits (72), Expect = 0.99 Identities = 34/125 (27%), Positives = 48/125 (38%) Frame = +2 Query: 200 SSSQTMAFSLLASSPRTQRTLGPQTLT*AYGTTTSRRGHMCGWPTATTQSAAVCRGSWF* 379 +++ T SL SSP T RT + GTT H+ T T+ + A G+ Sbjct: 2722 TTATTHGRSLSPSSPHTVRTAWTSATSGTLGTT-----HITEPSTGTSHTPAATTGTTQH 2776 Query: 380 QTPLISSCQTPKAVSFGGRRTTSPPAVTGPWRCCSRRGTLSSSRAISRRYGRAMITRPTP 559 TP +SS R T SPP+ P T +S + + + P Sbjct: 2777 STPALSSPHP------SSRTTESPPS---PGTTTPGHTTATSRTTATATPSKTRTSTLLP 2827 Query: 560 SSPAS 574 SSP S Sbjct: 2828 SSPTS 2832
>NUT1_MAGGR (Q01168) Nitrogen regulatory protein NUT1| Length = 956 Score = 32.0 bits (71), Expect = 1.3 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 8/106 (7%) Frame = +2 Query: 140 FVYANPMTA*HRRSHSCR---ATSSSQTMAFSLLASS-----PRTQRTLGPQTLT*AYGT 295 F + N M H+RSHS R AT + QT FS + P++ + G ++ +Y T Sbjct: 386 FFFGNGMDVRHQRSHSFRQPSATQNMQTQPFSYNGNGGGGFFPQSMASNG---MSSSYAT 442 Query: 296 TTSRRGHMCGWPTATTQSAAVCRGSWF*QTPLISSCQTPKAVSFGG 433 + + GH+ A V + Q+P + Q A +FGG Sbjct: 443 SGNTFGHI--------DPAQVFQNEQTAQSPGFNMMQENNAFNFGG 480
>INV3_DAUCA (Q39693) Beta-fructofuranosidase, insoluble isoenzyme 3 precursor| (EC 3.2.1.26) (Sucrose hydrolase 3) (Invertase 3) (Cell wall beta-fructosidase 3) Length = 583 Score = 30.8 bits (68), Expect = 2.9 Identities = 21/55 (38%), Positives = 28/55 (50%) Frame = +1 Query: 184 LLPGDKLVSNNGIFALGFFSPDPENSRAANSYLGIWYHDIPERTYVWVANRDNPI 348 +LPG+K V I G SPDPEN++ N + Y D R WV +NP+ Sbjct: 133 ILPGNKPV----ILYTGIVSPDPENAQVQNYAVPANYSDPFLRE--WVKPDNNPL 181
>BRSK1_HUMAN (Q8TDC3) BR serine/threonine-protein kinase 1 (EC 2.7.11.1) (SAD1| kinase) (SAD1A) Length = 794 Score = 30.8 bits (68), Expect = 2.9 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 5/69 (7%) Frame = +2 Query: 383 TPLISSCQTPKAVSFGGRRTTSPPAVTG-----PWRCCSRRGTLSSSRAISRRYGRAMIT 547 TPL S TP+A G TT PP+ G WR SR ++ +S S R+ R + Sbjct: 531 TPLHSPLHTPRASPTGTPGTTPPPSPGGGVGGAAWR--SRLNSIRNSFLGSPRFHRRKMQ 588 Query: 548 RPTPSSPAS 574 PT +S Sbjct: 589 VPTAEEMSS 597
>LEC_ALOAR (P49329) Mannose-specific lectin precursor (Agglutinin) [Contains:| Mannose-specific lectin heavy chain; Mannose-specific lectin light chain] Length = 109 Score = 30.0 bits (66), Expect = 4.9 Identities = 17/61 (27%), Positives = 30/61 (49%) Frame = +1 Query: 322 WVANRDNPIGSGLSGKLVLTNTSDLVLSDSKGRVLWRTTNNVTTGGDGAVALLLEAGNFV 501 W +N G L + L +LV+ +S R++W++ T GD + +L + GN V Sbjct: 41 WASNTG---GLALHCRATLQTDGNLVVQNSANRIIWQSNTGTGTNGD-YLLVLQKNGNVV 96 Query: 502 L 504 + Sbjct: 97 I 97
>ZN687_HUMAN (Q8N1G0) Zinc finger protein 687| Length = 1237 Score = 29.6 bits (65), Expect = 6.4 Identities = 24/79 (30%), Positives = 36/79 (45%) Frame = +2 Query: 224 SLLASSPRTQRTLGPQTLT*AYGTTTSRRGHMCGWPTATTQSAAVCRGSWF*QTPLISSC 403 SLL SP T + GP+ ++ G T +G + P AT Q+A+ L+++ Sbjct: 369 SLLKLSPATPTSEGPKVVSVQLGDGTRLKGTVL--PVATIQNASTAM--------LMAAS 418 Query: 404 QTPKAVSFGGRRTTSPPAV 460 KAV G TSP + Sbjct: 419 VARKAVVLPGGTATSPKMI 437
>ATS5_HUMAN (Q9UNA0) ADAMTS-5 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 5) (ADAM-TS 5) (ADAM-TS5) (Aggrecanase-2) (ADMP-2) (ADAM-TS 11) Length = 930 Score = 29.6 bits (65), Expect = 6.4 Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 1/62 (1%) Frame = +2 Query: 383 TPLISSCQTPKAVSFGGRRTTSPPAVTGPWRCCSRR-GTLSSSRAISRRYGRAMITRPTP 559 TP ++S T + G T+ P VTGPW CSR T +R + + G + + P Sbjct: 856 TPKVNSV-TSHGSNKVGSHTSQPQWVTGPWLACSRTCDTGWHTRTVQCQDGNRKLAKGCP 914 Query: 560 SS 565 S Sbjct: 915 LS 916
>PCSK7_RAT (Q62849) Proprotein convertase subtilisin/kexin type 7 precursor| (EC 3.4.21.-) (Proprotein convertase PC7) (Subtilisin/kexin-like protease PC7) (Prohormone convertase PC7) (rPC7) Length = 783 Score = 29.3 bits (64), Expect = 8.4 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 1/36 (2%) Frame = -3 Query: 412 WSLTRRDQRCLSEPT-SPTNRCRLGCRGWPPTHMSS 308 W++ + CLS+ + + T+ CR GC WPP +S Sbjct: 677 WTIYYMLEVCLSQRSKASTHGCRRGCCPWPPQSQNS 712
>CURC_CURLA (P19667) Curculin precursor| Length = 158 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/56 (32%), Positives = 25/56 (44%) Frame = +1 Query: 370 LVLTNTSDLVLSDSKGRVLWRTTNNVTTGGDGAVALLLEAGNFVLQSRNFTQIWQS 537 L + N +LV + GR +W +N G G LL GN V+ N +W S Sbjct: 45 LTIQNKCNLVKYQN-GRQIW--ASNTDRRGSGCRLTLLSDGNLVIYDHNNNDVWGS 97
>TENS1_BOVIN (Q9GLM4) Tensin-1| Length = 1715 Score = 29.3 bits (64), Expect = 8.4 Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%) Frame = -3 Query: 325 PTHMSSPGCRGTI-CLSKSLRP*SSLGPGRRSQERKCHCLRRACRPARVASP 173 PT SPG R + C+S L +L PG R +E H + A SP Sbjct: 913 PTSPRSPGVRSPVQCVSPELALTIALNPGGRPKEPHLHSYKEAFEEMEGTSP 964 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,170,953 Number of Sequences: 219361 Number of extensions: 2070046 Number of successful extensions: 6168 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 5943 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6148 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4872342800 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
