ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8k16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY963808.1| Triticum aestivum putative S-locus receptor kinas... 105 2e-19
2emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4,... 76 1e-10
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 76 1e-10
4dbj|AK119388.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
5dbj|AK064596.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
6emb|AL512545.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 76 1e-10
7ref|XM_474012.1| Oryza sativa (japonica cultivar-group), predic... 68 3e-08
8emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4,... 68 3e-08
9emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 68 3e-08
10emb|AL732333.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 68 3e-08
11gb|AF403128.1| Oryza sativa S-locus receptor-like kinase RLK11 (... 54 5e-04
12dbj|AK101815.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
13dbj|AK101202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
14dbj|AK068530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
15dbj|AK065575.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 5e-04
16ref|NM_187684.1| Oryza sativa (japonica cultivar-group), predic... 50 0.008
17gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 50 0.008
18gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome... 50 0.008
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.008
20dbj|AK098871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
21dbj|AK098866.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
22dbj|AK067131.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
23dbj|AK060765.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.008
24gb|AF403127.1| Oryza sativa S-locus receptor-like kinase RLK13 (... 46 0.13
25dbj|AK108040.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
26dbj|AK065352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.13
27emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clon... 46 0.13
28ref|XM_474009.1| Oryza sativa (japonica cultivar-group), predic... 44 0.50
29gb|AF403126.1| Oryza sativa S-locus receptor-like kinase RLK14 (... 44 0.50
30ref|NG_005579.1| Homo sapiens high-mobility group (nonhistone ch... 42 2.0
31gb|AC025469.6| Homo sapiens chromosome 5 clone CTD-2380K1, compl... 42 2.0
32gb|AC013565.10| Homo sapiens chromosome 15, clone RP11-326A19, c... 42 2.0
33gb|AF165167.1|AF165167 Homo sapiens high mobility group 1-like p... 42 2.0
34dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 2.0
35gb|AF064539.1|AF064539 Bacteriophage N15, complete genome 42 2.0
36emb|AL627264.19| Mouse DNA sequence from clone RP23-320F19 on ch... 42 2.0
37gb|AC164644.5| Mus musculus BAC clone RP23-276J7 from chromosome... 40 7.8
38ref|XM_474008.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
39ref|XM_472459.1| Oryza sativa (japonica cultivar-group), predic... 40 7.8
40ref|NM_186685.1| Oryza sativa (japonica cultivar-group), mRNA 40 7.8
41ref|XM_588744.2| PREDICTED: Bos taurus similar to Partitioning d... 40 7.8
42gb|AC115787.6| Mus musculus chromosome 16, clone RP23-212P1, com... 40 7.8
43gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome... 40 7.8
44gb|AC117221.3| Mus musculus BAC clone RP23-347F2 from 1, complet... 40 7.8
45gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.8
46gb|AY327038.1| Oryza sativa (japonica cultivar-group) iron trans... 40 7.8
47gb|AY324148.1| Oryza sativa (japonica cultivar-group) putative z... 40 7.8
48emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4,... 40 7.8
49emb|AJ297529.2|PST297529 Pseudomonas stutzeri nif operon and fla... 40 7.8
50dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 7.8
51gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 7.8
52gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Ca... 40 7.8
53gb|AY048850.1| Halobacterium salinarum strain J7 plasmid pHH205,... 40 7.8
54gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 7.8
55dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
56dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
57dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
58gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 7.8
59dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
60dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
61dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic D... 40 7.8
62dbj|AK110859.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
63dbj|AK110836.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.8
64gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 7.8
65gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 7.8
66emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4,... 40 7.8
67emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa... 40 7.8
68emb|AL808105.15| Mouse DNA sequence from clone RP23-22G24 on chr... 40 7.8 
>gb|AY963808.1| Triticum aestivum putative S-locus receptor kinase gene, partial cds;
            and mitochondrial Mn-superoxide dismutase (MnSOD) gene,
            complete cds, nuclear gene encoding mitochondrial protein
          Length = 11304

 Score =  105 bits (53), Expect = 2e-19
 Identities = 125/149 (83%)
 Strand = Plus / Minus

                                                                        
Query: 268  gcaaactcttacttaggcatatggtaccacgacatcccggagaggacatatgtgtgggtg 327
            |||||||| ||| |||||||||||||| || ||||||||||| | ||||| |||||||||
Sbjct: 2395 gcaaactcatacataggcatatggtacaacaacatcccggagcgaacatacgtgtgggtg 2336

                                                                        
Query: 328  gccaaccgcgacaacccaatcggcagcggtttgtcggggaagttggttctgacaaacacc 387
            || |||||||||| |||||||   ||| |||  || || ||||| ||| |||| || | |
Sbjct: 2335 gcaaaccgcgacagcccaatctctagcagttcctctggtaagtttgttttgaccaaaagc 2276

                                         
Query: 388  tctgatctcgtcttgtcagactccaaagg 416
            |||||||| ||||||| ||||||||||||
Sbjct: 2275 tctgatcttgtcttgttagactccaaagg 2247



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 91/111 (81%)
 Strand = Plus / Minus

                                                                        
Query: 136  ttgatttgtttatgcaaatccgatgaccgcctaacaccggcgaagccactcttgccgggc 195
            |||||||| || ||||| ||||| ||  ||||||||||  | || |||||||  || |||
Sbjct: 2518 ttgatttgcttctgcaactccgaagatagcctaacacccacaaaaccactctcccccggc 2459

                                                               
Query: 196  gacaagctcgtctcaaacaatggcattttcgctcttggcttcttctccccg 246
            |||| |||| ||||| ||  |||||| || |||||||||||||||||||||
Sbjct: 2458 gacaggctcatctcagacggtggcatctttgctcttggcttcttctccccg 2408
to top
>emb|AL606650.5|OSJN00097 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015D13,
              complete sequence
          Length = 127135

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                          
Query: 283    ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
              |||||||||||| || ||||||||||| | || ||||| ||||| |||||||||||||||
Sbjct: 116556 ggcatatggtacaacaacatcccggagcgcacctatgtctgggtcgccaaccgcgacaac 116497

                    
Query: 343    ccaatc 348
              ||||||
Sbjct: 116496 ccaatc 116491



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                 
Query: 136    ttgatttgtttatgcaaatccgatgaccgcctaacaccggcgaagccactc 186
              |||||| |||| ||| ||||||||||||||||||||||||| |||||||||
Sbjct: 116709 ttgattagtttctgccaatccgatgaccgcctaacaccggcaaagccactc 116659



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                             
Query: 318    tgtgtgggtggccaaccgcgacaacccaatc 348
              ||||||||| |||||||||||||||||||||
Sbjct: 122566 tgtgtgggttgccaaccgcgacaacccaatc 122536



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 322    tgggtggccaaccgcgacaacccaatc 348
              ||||| |||||||||||||||||||||
Sbjct: 111522 tgggtcgccaaccgcgacaacccaatc 111496



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 319    gtgtgggtggccaaccgcgacaacccaatc 348
              |||||||| |||||||| ||||||||||||
Sbjct: 106732 gtgtgggttgccaaccgtgacaacccaatc 106703



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 526    atatggcagagctatgatcacccgaccgacacc 558
              ||||||||||||| ||||||||| || ||||||
Sbjct: 111321 atatggcagagctttgatcacccaactgacacc 111289
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                            
Query: 283      ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
                |||||||||||| || ||||||||||| | || ||||| ||||| |||||||||||||||
Sbjct: 32220867 ggcatatggtacaacaacatcccggagcgcacctatgtctgggtcgccaaccgcgacaac 32220808

                      
Query: 343      ccaatc 348
                ||||||
Sbjct: 32220807 ccaatc 32220802



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                   
Query: 136      ttgatttgtttatgcaaatccgatgaccgcctaacaccggcgaagccactc 186
                |||||| |||| ||| ||||||||||||||||||||||||| |||||||||
Sbjct: 32221020 ttgattagtttctgccaatccgatgaccgcctaacaccggcaaagccactc 32220970



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                            
Query: 283      ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
                ||||||||||||||| |||||||| || | |||||||| ||||| |||||||| ||||||
Sbjct: 32281917 ggcatatggtaccacaacatcccgcagcgcacatatgtttgggttgccaaccgagacaac 32281858

                  
Query: 343      cc 344
                ||
Sbjct: 32281857 cc 32281856



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                               
Query: 318      tgtgtgggtggccaaccgcgacaacccaatc 348
                ||||||||| |||||||||||||||||||||
Sbjct: 32226877 tgtgtgggttgccaaccgcgacaacccaatc 32226847



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 322      tgggtggccaaccgcgacaacccaatc 348
                ||||| |||||||||||||||||||||
Sbjct: 32215833 tgggtcgccaaccgcgacaacccaatc 32215807



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                            
Query: 283      ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
                |||||||||||  || ||||||| ||| | ||||| || ||||| || ||||| ||||||
Sbjct: 32266095 ggcatatggtataacaacatcccagagcgaacatacgtttgggttgctaaccgtgacaac 32266036

                      
Query: 343      ccaatc 348
                ||||||
Sbjct: 32266035 ccaatc 32266030



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 319      gtgtgggtggccaaccgcgacaacccaatc 348
                |||||||| |||||||| ||||||||||||
Sbjct: 32211043 gtgtgggttgccaaccgtgacaacccaatc 32211014



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                                 
Query: 526      atatggcagagctatgatcacccgaccgacacc 558
                ||||||||||||| ||||||||| || ||||||
Sbjct: 32215632 atatggcagagctttgatcacccaactgacacc 32215600



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 322      tgggtggccaaccgcgacaaccca 345
                ||||||||||||||||||| ||||
Sbjct: 32260607 tgggtggccaaccgcgacagccca 32260584



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                                
Query: 193      ggcgacaagctcgtctcaaacaatggcattttcgctcttggcttcttc 240
                |||||||||||||| || | ||||||||  ||||| || |||||||||
Sbjct: 20767019 ggcgacaagctcgtgtccagcaatggcaggttcgccctcggcttcttc 20767066
to top
>dbj|AK119388.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-C04, full
           insert sequence
          Length = 2776

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Plus

                                                                       
Query: 283 ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
           |||||||||||| || ||||||||||| | || ||||| ||||| |||||||||||||||
Sbjct: 383 ggcatatggtacaacaacatcccggagcgcacctatgtctgggtcgccaaccgcgacaac 442

                 
Query: 343 ccaatc 348
           ||||||
Sbjct: 443 ccaatc 448



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                              
Query: 136 ttgatttgtttatgcaaatccgatgaccgcctaacaccggcgaagccactc 186
           |||||| |||| ||| ||||||||||||||||||||||||| |||||||||
Sbjct: 230 ttgattagtttctgccaatccgatgaccgcctaacaccggcaaagccactc 280
to top
>dbj|AK064596.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-112-G11, full
            insert sequence
          Length = 1523

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                        
Query: 283  ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
            |||||||||||| || ||||||||||| | || ||||| ||||| |||||||||||||||
Sbjct: 1101 ggcatatggtacaacaacatcccggagcgcacctatgtctgggtcgccaaccgcgacaac 1042

                  
Query: 343  ccaatc 348
            ||||||
Sbjct: 1041 ccaatc 1036



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                               
Query: 136  ttgatttgtttatgcaaatccgatgaccgcctaacaccggcgaagccactc 186
            |||||| |||| ||| ||||||||||||||||||||||||| |||||||||
Sbjct: 1254 ttgattagtttctgccaatccgatgaccgcctaacaccggcaaagccactc 1204
to top
>emb|AL512545.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: B0808H03, complete
             sequence
          Length = 42793

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 59/66 (89%)
 Strand = Plus / Minus

                                                                         
Query: 283   ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
             |||||||||||| || ||||||||||| | || ||||| ||||| |||||||||||||||
Sbjct: 27600 ggcatatggtacaacaacatcccggagcgcacctatgtctgggtcgccaaccgcgacaac 27541

                   
Query: 343   ccaatc 348
             ||||||
Sbjct: 27540 ccaatc 27535



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 47/51 (92%)
 Strand = Plus / Minus

                                                                
Query: 136   ttgatttgtttatgcaaatccgatgaccgcctaacaccggcgaagccactc 186
             |||||| |||| ||| ||||||||||||||||||||||||| |||||||||
Sbjct: 27753 ttgattagtttctgccaatccgatgaccgcctaacaccggcaaagccactc 27703



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 318   tgtgtgggtggccaaccgcgacaacccaatc 348
             ||||||||| |||||||||||||||||||||
Sbjct: 33614 tgtgtgggttgccaaccgcgacaacccaatc 33584



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 322   tgggtggccaaccgcgacaacccaatc 348
             ||||| |||||||||||||||||||||
Sbjct: 22569 tgggtcgccaaccgcgacaacccaatc 22543



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 319   gtgtgggtggccaaccgcgacaacccaatc 348
             |||||||| |||||||| ||||||||||||
Sbjct: 17763 gtgtgggttgccaaccgtgacaacccaatc 17734



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 526   atatggcagagctatgatcacccgaccgacacc 558
             ||||||||||||| ||||||||| || ||||||
Sbjct: 22368 atatggcagagctttgatcacccaactgacacc 22336
to top
>ref|XM_474012.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2469

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Plus

                                                                       
Query: 283 ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
           ||||||||||||||| |||||||| || | |||||||| ||||| |||||||| ||||||
Sbjct: 178 ggcatatggtaccacaacatcccgcagcgcacatatgtttgggttgccaaccgagacaac 237

             
Query: 343 cc 344
           ||
Sbjct: 238 cc 239
to top
>emb|AL606444.3|OSJN00019 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0043L09,
             complete sequence
          Length = 159502

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 283   ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
             ||||||||||||||| |||||||| || | |||||||| ||||| |||||||| ||||||
Sbjct: 51500 ggcatatggtaccacaacatcccgcagcgcacatatgtttgggttgccaaccgagacaac 51441

               
Query: 343   cc 344
             ||
Sbjct: 51440 cc 51439



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 283   ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
             |||||||||||  || ||||||| ||| | ||||| || ||||| || ||||| ||||||
Sbjct: 35674 ggcatatggtataacaacatcccagagcgaacatacgtttgggttgctaaccgtgacaac 35615

                   
Query: 343   ccaatc 348
             ||||||
Sbjct: 35614 ccaatc 35609



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 322   tgggtggccaaccgcgacaaccca 345
             ||||||||||||||||||| ||||
Sbjct: 30186 tgggtggccaaccgcgacagccca 30163
to top
>emb|AL732338.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0315F07,
           complete sequence
          Length = 73187

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                       
Query: 283 ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
           ||||||||||||||| |||||||| || | |||||||| ||||| |||||||| ||||||
Sbjct: 254 ggcatatggtaccacaacatcccgcagcgcacatatgtttgggttgccaaccgagacaac 195

             
Query: 343 cc 344
           ||
Sbjct: 194 cc 193
to top
>emb|AL732333.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0613A10, complete
             sequence
          Length = 77572

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                         
Query: 283   ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
             ||||||||||||||| |||||||| || | |||||||| ||||| |||||||| ||||||
Sbjct: 51146 ggcatatggtaccacaacatcccgcagcgcacatatgtttgggttgccaaccgagacaac 51087

               
Query: 343   cc 344
             ||
Sbjct: 51086 cc 51085



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                         
Query: 283   ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
             |||||||||||  || ||||||| ||| | ||||| || ||||| || ||||| ||||||
Sbjct: 32071 ggcatatggtataacaacatcccagagcgaacatacgtttgggttgctaaccgtgacaac 32012

                   
Query: 343   ccaatc 348
             ||||||
Sbjct: 32011 ccaatc 32006



 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 322   tgggtggccaaccgcgacaaccca 345
             ||||||||||||||||||| ||||
Sbjct: 26550 tgggtggccaaccgcgacagccca 26527
to top
>gb|AF403128.1| Oryza sativa S-locus receptor-like kinase RLK11 (RLK11) mRNA,
           complete cds
          Length = 3003

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 318 tgtgtgggtggccaaccgcgacaacccaatc 348
           ||||||||| |||||||||||||||||||||
Sbjct: 232 tgtgtgggttgccaaccgcgacaacccaatc 262
to top
>dbj|AK101815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033067A06, full
            insert sequence
          Length = 3575

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 318  tgtgtgggtggccaaccgcgacaacccaatc 348
            ||||||||| |||||||||||||||||||||
Sbjct: 1076 tgtgtgggttgccaaccgcgacaacccaatc 1046
to top
>dbj|AK101202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033030N10, full
            insert sequence
          Length = 4080

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 318  tgtgtgggtggccaaccgcgacaacccaatc 348
            ||||||||| |||||||||||||||||||||
Sbjct: 1583 tgtgtgggttgccaaccgcgacaacccaatc 1553
to top
>dbj|AK068530.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156P12, full
            insert sequence
          Length = 2249

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 318  tgtgtgggtggccaaccgcgacaacccaatc 348
            ||||||||| |||||||||||||||||||||
Sbjct: 1595 tgtgtgggttgccaaccgcgacaacccaatc 1565
to top
>dbj|AK065575.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013028H11, full
            insert sequence
          Length = 2872

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                           
Query: 318  tgtgtgggtggccaaccgcgacaacccaatc 348
            ||||||||| |||||||||||||||||||||
Sbjct: 1574 tgtgtgggttgccaaccgcgacaacccaatc 1544
to top
>ref|NM_187684.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2532

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 529 tggcagagctatgatcacccgaccgacac 557
           |||||||||| ||||||||||||||||||
Sbjct: 475 tggcagagctttgatcacccgaccgacac 503
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 529     tggcagagctatgatcacccgaccgacac 557
               |||||||||| ||||||||||||||||||
Sbjct: 6346213 tggcagagctttgatcacccgaccgacac 6346241
to top
>gb|AC105364.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1743A09,
             complete sequence
          Length = 146568

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                          
Query: 529   tggcagagctatgatcacccgaccgacac 557
             |||||||||| ||||||||||||||||||
Sbjct: 26339 tggcagagctttgatcacccgaccgacac 26367
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                            
Query: 529     tggcagagctatgatcacccgaccgacac 557
               |||||||||| ||||||||||||||||||
Sbjct: 6345426 tggcagagctttgatcacccgaccgacac 6345454
to top
>dbj|AK098871.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001B07, full
           insert sequence
          Length = 2756

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 529 tggcagagctatgatcacccgaccgacac 557
           |||||||||| ||||||||||||||||||
Sbjct: 513 tggcagagctttgatcacccgaccgacac 541
to top
>dbj|AK098866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001A09, full
           insert sequence
          Length = 2770

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 529 tggcagagctatgatcacccgaccgacac 557
           |||||||||| ||||||||||||||||||
Sbjct: 520 tggcagagctttgatcacccgaccgacac 548
to top
>dbj|AK067131.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095L11, full
            insert sequence
          Length = 2728

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 529  tggcagagctatgatcacccgaccgacac 557
            |||||||||| ||||||||||||||||||
Sbjct: 1926 tggcagagctttgatcacccgaccgacac 1898
to top
>dbj|AK060765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A08, full
           insert sequence
          Length = 2830

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 529 tggcagagctatgatcacccgaccgacac 557
           |||||||||| ||||||||||||||||||
Sbjct: 519 tggcagagctttgatcacccgaccgacac 547
to top
>gb|AF403127.1| Oryza sativa S-locus receptor-like kinase RLK13 (RLK13) mRNA,
           complete cds
          Length = 2580

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 322 tgggtggccaaccgcgacaacccaatc 348
           ||||| |||||||||||||||||||||
Sbjct: 260 tgggtcgccaaccgcgacaacccaatc 286



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 526 atatggcagagctatgatcacccgaccgacacc 558
           ||||||||||||| ||||||||| || ||||||
Sbjct: 461 atatggcagagctttgatcacccaactgacacc 493
to top
>dbj|AK108040.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-D02, full
            insert sequence
          Length = 1616

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 322  tgggtggccaaccgcgacaacccaatc 348
            ||||| |||||||||||||||||||||
Sbjct: 1283 tgggtcgccaaccgcgacaacccaatc 1257



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                             
Query: 526  atatggcagagctatgatcacccgaccgacacc 558
            ||||||||||||| ||||||||| || ||||||
Sbjct: 1082 atatggcagagctttgatcacccaactgacacc 1050
to top
>dbj|AK065352.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022L23, full
           insert sequence
          Length = 2566

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 322 tgggtggccaaccgcgacaacccaatc 348
           ||||| |||||||||||||||||||||
Sbjct: 243 tgggtcgccaaccgcgacaacccaatc 269



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 526 atatggcagagctatgatcacccgaccgacacc 558
           ||||||||||||| ||||||||| || ||||||
Sbjct: 444 atatggcagagctttgatcacccaactgacacc 476
to top
>emb|AL732336.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0105C05, complete
             sequence
          Length = 62215

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 322   tgggtggccaaccgcgacaacccaatc 348
             ||||| |||||||||||||||||||||
Sbjct: 58966 tgggtcgccaaccgcgacaacccaatc 58940



 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 319   gtgtgggtggccaaccgcgacaacccaatc 348
             |||||||| |||||||| ||||||||||||
Sbjct: 54160 gtgtgggttgccaaccgtgacaacccaatc 54131



 Score = 42.1 bits (21), Expect = 2.0
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 526   atatggcagagctatgatcacccgaccgacacc 558
             ||||||||||||| ||||||||| || ||||||
Sbjct: 58765 atatggcagagctttgatcacccaactgacacc 58733
to top
>ref|XM_474009.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2445

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 55/66 (83%)
 Strand = Plus / Plus

                                                                       
Query: 283 ggcatatggtaccacgacatcccggagaggacatatgtgtgggtggccaaccgcgacaac 342
           |||||||||||  || ||||||| ||| | ||||| || ||||| || ||||| ||||||
Sbjct: 175 ggcatatggtataacaacatcccagagcgaacatacgtttgggttgctaaccgtgacaac 234

                 
Query: 343 ccaatc 348
           ||||||
Sbjct: 235 ccaatc 240
to top
>gb|AF403126.1| Oryza sativa S-locus receptor-like kinase RLK14 (RLK14) mRNA,
           complete cds
          Length = 2603

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 319 gtgtgggtggccaaccgcgacaacccaatc 348
           |||||||| |||||||| ||||||||||||
Sbjct: 230 gtgtgggttgccaaccgtgacaacccaatc 259
to top
>ref|NG_005579.1| Homo sapiens high-mobility group (nonhistone chromosomal) protein
           1-like 8 (HMG1L8) pseudogene on chromosome 15
          Length = 2228

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 215 atggcattttcgctcttggcttctt 239
           ||||||||||| |||||||||||||
Sbjct: 498 atggcattttctctcttggcttctt 474
to top
>gb|AC025469.6| Homo sapiens chromosome 5 clone CTD-2380K1, complete sequence
          Length = 109745

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 134   tgttgatttgtttatgcaaat 154
             |||||||||||||||||||||
Sbjct: 82587 tgttgatttgtttatgcaaat 82607
to top
>gb|AC013565.10| Homo sapiens chromosome 15, clone RP11-326A19, complete sequence
          Length = 188246

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 215    atggcattttcgctcttggcttctt 239
              ||||||||||| |||||||||||||
Sbjct: 141753 atggcattttctctcttggcttctt 141777
to top
>gb|AF165167.1|AF165167 Homo sapiens high mobility group 1-like protein L8 (HMG1L8)
           retropseudogene, complete sequence
          Length = 2228

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 215 atggcattttcgctcttggcttctt 239
           ||||||||||| |||||||||||||
Sbjct: 498 atggcattttctctcttggcttctt 474
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 453     cggcggtgacggggccgtggcgctg 477
               ||||||||||| |||||||||||||
Sbjct: 6187183 cggcggtgacgtggccgtggcgctg 6187159
to top
>gb|AF064539.1|AF064539 Bacteriophage N15, complete genome
          Length = 46375

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 364   gggaagttggttctgacaaac 384
             |||||||||||||||||||||
Sbjct: 19177 gggaagttggttctgacaaac 19197
to top
>emb|AL627264.19| Mouse DNA sequence from clone RP23-320F19 on chromosome 4, complete
             sequence
          Length = 84514

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 96    aatgggcaagacccttcctgtcattttca 124
             |||||| ||||| ||||||||||||||||
Sbjct: 21712 aatgggaaagacacttcctgtcattttca 21740
to top
>gb|AC164644.5| Mus musculus BAC clone RP23-276J7 from chromosome 5, complete sequence
          Length = 171252

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 96     aatgggcaagacccttcctg 115
              ||||||||||||||||||||
Sbjct: 103433 aatgggcaagacccttcctg 103414
to top
>ref|XM_474008.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2517

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 322 tgggtggccaaccgcgacaaccca 345
           ||||||||||||||||||| ||||
Sbjct: 265 tgggtggccaaccgcgacagccca 288
to top
>ref|XM_472459.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2550

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 193 ggcgacaagctcgtctcaaacaatggcattttcgctcttggcttcttc 240
           |||||||||||||| || | ||||||||  ||||| || |||||||||
Sbjct: 247 ggcgacaagctcgtgtccagcaatggcaggttcgccctcggcttcttc 294
to top
>ref|NM_186685.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1074

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 ggccgtggcgctgctgctcg 484
           ||||||||||||||||||||
Sbjct: 39  ggccgtggcgctgctgctcg 58
to top
>ref|XM_588744.2| PREDICTED: Bos taurus similar to Partitioning defective-6 homolog
           beta (PAR-6 beta) (PAR-6B) (LOC539687), mRNA
          Length = 1396

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 548 cgaccgacaccatcctccccagct 571
           |||||||||||| |||||||||||
Sbjct: 776 cgaccgacaccagcctccccagct 799
to top
>gb|AC115787.6| Mus musculus chromosome 16, clone RP23-212P1, complete sequence
          Length = 209108

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 29     gtaaaactcatgctgctgtg 48
              ||||||||||||||||||||
Sbjct: 132684 gtaaaactcatgctgctgtg 132703
to top
>gb|AC121828.3| Mus musculus BAC clone RP23-478K4 from chromosome 1, complete sequence
          Length = 179626

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 44    ctgtgagcttgttactttgctctt 67
             |||||||||||||||| |||||||
Sbjct: 79931 ctgtgagcttgttactatgctctt 79908
to top
>gb|AC117221.3| Mus musculus BAC clone RP23-347F2 from 1, complete sequence
          Length = 194077

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 44     ctgtgagcttgttactttgctctt 67
              |||||||||||||||| |||||||
Sbjct: 182416 ctgtgagcttgttactatgctctt 182393
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 473     cgctgctgctcgaggcgggg 492
               ||||||||||||||||||||
Sbjct: 2550400 cgctgctgctcgaggcgggg 2550419
to top
>gb|AY327038.1| Oryza sativa (japonica cultivar-group) iron transporter Fe2 mRNA,
           complete cds
          Length = 1255

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 ggccgtggcgctgctgctcg 484
           ||||||||||||||||||||
Sbjct: 77  ggccgtggcgctgctgctcg 96
to top
>gb|AY324148.1| Oryza sativa (japonica cultivar-group) putative zinc transporter
           (OsZIP1) mRNA, complete cds
          Length = 1207

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 ggccgtggcgctgctgctcg 484
           ||||||||||||||||||||
Sbjct: 48  ggccgtggcgctgctgctcg 67
to top
>emb|AL662944.3|OSJN00134 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0028I23,
             complete sequence
          Length = 148736

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                             
Query: 193   ggcgacaagctcgtctcaaacaatggcattttcgctcttggcttcttc 240
             |||||||||||||| || | ||||||||  ||||| || |||||||||
Sbjct: 13744 ggcgacaagctcgtgtccagcaatggcaggttcgccctcggcttcttc 13791
to top
>emb|AJ297529.2|PST297529 Pseudomonas stutzeri nif operon and flanking genes, strain A15101
          Length = 24798

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   ggccgtggcgctgctgctcg 484
             ||||||||||||||||||||
Sbjct: 19381 ggccgtggcgctgctgctcg 19400
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 439     aacaacgtcaccaccggcgg 458
               ||||||||||||||||||||
Sbjct: 2948822 aacaacgtcaccaccggcgg 2948803
to top
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 340     aacccaatcggcagcggttt 359
               ||||||||||||||||||||
Sbjct: 1389489 aacccaatcggcagcggttt 1389470
to top
>gb|AC009260.13| Homo sapiens 12 BAC RP11-435A10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 99727

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   ctgttgatttgtttatgcaa 152
             ||||||||||||||||||||
Sbjct: 73041 ctgttgatttgtttatgcaa 73022
to top
>gb|AY048850.1| Halobacterium salinarum strain J7 plasmid pHH205, complete sequence
          Length = 16341

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 472   gcgctgctgctcgaggcggg 491
             ||||||||||||||||||||
Sbjct: 11484 gcgctgctgctcgaggcggg 11503
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 470     tggcgctgctgctcgaggcg 489
               ||||||||||||||||||||
Sbjct: 2675337 tggcgctgctgctcgaggcg 2675318
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 527     tatggcagagctatgatcacccgaccgacacc 558
               ||||||||||||  |||||||| |||||||||
Sbjct: 1463352 tatggcagagcttcgatcaccccaccgacacc 1463321
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 526     atatggcagagctatgatcacccgaccgacac 557
               |||||||||||||  || ||||||||||||||
Sbjct: 4629654 atatggcagagcttcgaccacccgaccgacac 4629685
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 465     ggccgtggcgctgctgctcg 484
               ||||||||||||||||||||
Sbjct: 7426718 ggccgtggcgctgctgctcg 7426737
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 468     cgtggcgctgctgctcgaggcggg 491
               |||||||||||||| |||||||||
Sbjct: 2505039 cgtggcgctgctgcacgaggcggg 2505016
to top
>dbj|AP005774.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OSJNBa0086N05
          Length = 163670

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    ggccgtggcgctgctgctcg 484
              ||||||||||||||||||||
Sbjct: 153399 ggccgtggcgctgctgctcg 153418
to top
>dbj|AP004590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0577G06
          Length = 58137

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 526   atatggcagagctatgatcacccgaccgacac 557
             |||||||||||||  || ||||||||||||||
Sbjct: 44159 atatggcagagcttcgaccacccgaccgacac 44190
to top
>dbj|AP005246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OSJNBa0061L20
          Length = 138926

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 465  ggccgtggcgctgctgctcg 484
            ||||||||||||||||||||
Sbjct: 5032 ggccgtggcgctgctgctcg 5051
to top
>dbj|AK110859.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-D04, full
            insert sequence
          Length = 1468

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 41/48 (85%)
 Strand = Plus / Minus

                                                            
Query: 193  ggcgacaagctcgtctcaaacaatggcattttcgctcttggcttcttc 240
            |||||||||||||| || | ||||||||  ||||| || |||||||||
Sbjct: 1099 ggcgacaagctcgtgtccagcaatggcaggttcgccctcggcttcttc 1052
to top
>dbj|AK110836.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-172-B01, full
           insert sequence
          Length = 2555

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                           
Query: 193 ggcgacaagctcgtctcaaacaatggcattttcgctcttggcttcttc 240
           |||||||||||||| || | ||||||||  ||||| || |||||||||
Sbjct: 52  ggcgacaagctcgtgtccagcaatggcaggttcgccctcggcttcttc 99
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 439     aacaacgtcaccaccggcgg 458
               ||||||||||||||||||||
Sbjct: 2970856 aacaacgtcaccaccggcgg 2970837
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 527     tatggcagagctatgatcacccgaccgacacc 558
               ||||||||||||  |||||||| |||||||||
Sbjct: 1463352 tatggcagagcttcgatcaccccaccgacacc 1463321
to top
>emb|AL606618.4|OSJN00062 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0108J11,
              complete sequence
          Length = 124629

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 41/48 (85%)
 Strand = Plus / Plus

                                                              
Query: 193    ggcgacaagctcgtctcaaacaatggcattttcgctcttggcttcttc 240
              |||||||||||||| || | ||||||||  ||||| || |||||||||
Sbjct: 113170 ggcgacaagctcgtgtccagcaatggcaggttcgccctcggcttcttc 113217
to top
>emb|BX000498.1|CNS08CDO Oryza sativa chromosome 12, . BAC OSJNBa0009F13 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 183385

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 527    tatggcagagctatgatcacccgaccgacacc 558
              ||||||||||||  |||||||| |||||||||
Sbjct: 162380 tatggcagagcttcgatcaccccaccgacacc 162411
to top
>emb|AL808105.15| Mouse DNA sequence from clone RP23-22G24 on chromosome 4, complete
            sequence
          Length = 252003

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 45   tgtgagcttgttactttgct 64
            ||||||||||||||||||||
Sbjct: 7694 tgtgagcttgttactttgct 7675


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,327,058
Number of Sequences: 3902068
Number of extensions: 4327058
Number of successful extensions: 79020
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78134
Number of HSP's gapped (non-prelim): 885
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top