ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8k07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator ... 28 8.2
2BLAR_BACLI (P12287) Regulatory protein blaR1 28 8.2

>CMTA4_ARATH (Q9FYG2) Calmodulin-binding transcription activator 4|
           (Signal-responsive protein 5) (Ethylene-induced
           calmodulin-binding protein d) (EICBP.d)
           (Ethylene-induced calmodulin-binding protein 4) (EICBP4)
           (AtFIN21)
          Length = 1016

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 7/52 (13%)
 Frame = -3

Query: 152 IASIDAASNRSAYSFTFGQ-------IHKGVILCAAPACVG*KSNLIIPAGE 18
           I S       S +S  FG        I +GVI C AP C   K NL I +G+
Sbjct: 467 IGSFLCDPTESTWSCMFGNAQVPFEIIKEGVIRCEAPQCGPGKVNLCITSGD 518



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>BLAR_BACLI (P12287) Regulatory protein blaR1|
          Length = 601

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/34 (35%), Positives = 21/34 (61%)
 Frame = +3

Query: 54  HTCRRST*NYSLVNLAKSKGVRAPVTGGINRCYI 155
           HTC+     +  V L++S  +++P+T G+ R YI
Sbjct: 159 HTCKEEIRFHQKVILSRSPLIKSPITFGVIRPYI 192


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,486,735
Number of Sequences: 219361
Number of extensions: 574772
Number of successful extensions: 958
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 942
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 80,573,946
effective HSP length: 58
effective length of database: 67,851,008
effective search space used: 1628424192
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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