>CO8B_HUMAN (P07358) Complement component C8 beta chain precursor (Complement|
           component 8 beta subunit)
          Length = 591

 Score = 33.1 bits (74), Expect = 0.60
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +3

Query: 237 CLFPPGSSGHSSMDTDEAGGSRFYAWERD-RFAPYPLMPVDCETSWWSS 380
           CL  PGS G           ++ +A  R  R     LMP+DCE S WSS
Sbjct: 24  CLSLPGSRGERPHSFGSNAVNKSFAKSRQMRSVDVTLMPIDCELSSWSS 72

>CD2L5_HUMAN (Q14004) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5) (Cholinesterase-related
           cell division controller)
          Length = 1512

 Score = 32.7 bits (73), Expect = 0.79
 Identities = 22/55 (40%), Positives = 26/55 (47%)
 Frame = +3

Query: 18  RGSVVSPSYFSNGSGSRSRAPNVPPLVPQFMRAHGSINEQYPQSSSSSLFAGAHR 182
           RG  VSPS +S+ S  RSR+P  P L     R  G    + P SS  S     HR
Sbjct: 378 RGGDVSPSPYSSSSWRRSRSPYSPVL-----RRSGKSRSRSPYSSRHSRSRSRHR 427

>RAVR1_HUMAN (Q8IY67) Protein raver-1|
          Length = 606

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 35/140 (25%), Positives = 51/140 (36%), Gaps = 13/140 (9%)
 Frame = +3

Query: 87  PPLVPQFMRA---HGSINEQYPQSSSS----SLFAGAHRSGGMRXXXXXXXXXXXTFCLF 245
           PP  P  +R     G ++  Y  S +S     L AG  +S   +                
Sbjct: 464 PPPAPVGLRGSGLRGPLSHFYSGSPTSYFTSGLQAGLKQSHLSKAIGSSPLGSGEGLLGL 523

Query: 246 PPGSSGHSSMDTDEAGGSRFYAWERDRFAPYPLMPVDCETSWWSSQQSHGASEST----- 410
            PG +GHS +    AGG     WE    AP P  P+    +  S  + H A+ +      
Sbjct: 524 SPGPNGHSHLLKVRAGGGDMQGWE----APAPQRPL-TRPALPSVSRPHWAARNAALPTC 578

Query: 411 -PAPAPRRLFGQWIGLGRSS 467
            P P+P +    W    R+S
Sbjct: 579 CPRPSPAQKAAMWASTPRAS 598

>KCNQ2_RAT (O88943) Potassium voltage-gated channel subfamily KQT member 2|
           (Voltage-gated potassium channel subunit Kv7.2)
           (Potassium channel alpha subunit KvLQT2) (KQT-like 2)
          Length = 852

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 30/101 (29%), Positives = 37/101 (36%), Gaps = 18/101 (17%)
 Frame = +3

Query: 246 PPGSSGHSSMDTDEAGG-------SRFYAWERDRFAPYPLMPVDC--ETSWWSSQQSHGA 398
           PP  S   S D  +  G       S     +R   AP  + P +C   TSW  S Q HG 
Sbjct: 651 PPYHSPEDSRDHADKHGCIIKIVRSTSSTGQRKYAAPPVMPPAECPPSTSWQQSHQRHGT 710

Query: 399 S---------ESTPAPAPRRLFGQWIGLGRSSPENRSPEGS 494
           S            P PA  R    + G  R+S E    EG+
Sbjct: 711 SPVGDHGSLVRIPPPPAHERSLSAYSGGNRASTEFLRLEGT 751

>ROM1_YEAST (P53046) RHO1 GDP-GTP exchange protein 1 (Protein kinase C|
           suppressor SKC1)
          Length = 1155

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 22/58 (37%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
 Frame = +3

Query: 15  RRGSVVSPSYFSNGSGSRSRAPN------VPPLVPQFMRAHGSINEQYPQSSSSSLFA 170
           R+ S  S   FS  SGS    PN       P      M  H S N ++  SS+SSLFA
Sbjct: 151 RKHSSPSLLSFSKNSGSHMGDPNQLSTPPTPKSAGHTMELHSSFNGKHSSSSTSSLFA 208

>HXABA_BRARE (Q9DDU0) Homeobox protein Hox-A11a|
          Length = 284

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/46 (34%), Positives = 24/46 (52%)
 Frame = +3

Query: 360 ETSWWSSQQSHGASESTPAPAPRRLFGQWIGLGRSSPENRSPEGSS 497
           +  + +  + H + +STPAPAP +        G+  PE  SPE SS
Sbjct: 156 DNDYAARDKMHSSKQSTPAPAPEQQ-----PEGKERPETSSPESSS 196

>GON2_SUNMU (O97686) Progonadoliberin-2 precursor (Progonadoliberin II)|
           [Contains: Gonadoliberin-2 (Gonadoliberin II)
           (Luteinizing hormone-releasing hormone II) (LH-RH II)
           (Gonadotropin-releasing hormone II) (GnRH II) (Luliberin
           II); GnRH-associated pepti
          Length = 110

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 15/46 (32%), Positives = 19/46 (41%)
 Frame = +3

Query: 333 PYPLMPVDCETSWWSSQQSHGASESTPAPAPRRLFGQWIGLGRSSP 470
           P PL        W+   +    S   P PAPR   G W+GL   +P
Sbjct: 21  PGPLKAQHWSHGWYPGGKRSPDSPQDPQPAPRFPEGYWLGLAAGNP 66

>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5)
          Length = 1511

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 21/55 (38%), Positives = 25/55 (45%)
 Frame = +3

Query: 18  RGSVVSPSYFSNGSGSRSRAPNVPPLVPQFMRAHGSINEQYPQSSSSSLFAGAHR 182
           RG  VSPS +S+ S  RSR+P  P L     R       + P SS  S     HR
Sbjct: 379 RGGDVSPSPYSSSSWRRSRSPYSPVL-----RRSAKSRSRSPYSSRHSRSRSRHR 428

>NXF3_HUMAN (Q9H4D5) Nuclear RNA export factor 3 (TAP-like protein 3) (TAPL-3)|
          Length = 531

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 3/68 (4%)
 Frame = +3

Query: 246 PPGSSGHSSMDTDEAGGSRFYAWERD---RFAPYPLMPVDCETSWWSSQQSHGASESTPA 416
           P     HSS    + G +  +    D   R+ PY + P + + S+    Q+H   E    
Sbjct: 36  PVNPGMHSSSHQQQDGDAAMHGAHMDSPVRYTPYTISPYNRKGSFRKQDQTHVNMEREQK 95

Query: 417 PAPRRLFG 440
           P  RR+ G
Sbjct: 96  PPERRMEG 103


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 87,431,551
Number of Sequences: 219361
Number of extensions: 1921823
Number of successful extensions: 5166
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5157
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)