ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8j18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence Length = 124050 Score = 65.9 bits (33), Expect = 7e-08 Identities = 42/45 (93%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataagtctttttagacgtttcact 302 ||||||||||| || ||||||||||||||||||||| |||||||| Sbjct: 52475 ctactccctccgttcctaaatataagtctttttagatgtttcact 52431 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttagacgtttca 300 |||||||||| || ||||||||||||||||||||| |||||| Sbjct: 57344 tactccctccgttcctaaatataagtctttttagaggtttca 57385
>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence Length = 211664 Score = 65.9 bits (33), Expect = 7e-08 Identities = 39/41 (95%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttttagacgttt 298 ||||||||||| |||||||||||||||||||||||| |||| Sbjct: 29833 ctactccctccgtttctaaatataagtctttttagaggttt 29873 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || ||||||||||||||||||||| |||||||| Sbjct: 76812 tactccctccgttcctaaatataagtctttttagaggtttcact 76855 Score = 60.0 bits (30), Expect = 4e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatataagtctttttaga 293 ||||||||||||| || ||||||||||||||||||||| Sbjct: 76978 atctactccctccgttcctaaatataagtctttttaga 76941 Score = 46.1 bits (23), Expect = 0.067 Identities = 29/31 (93%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttt 289 |||||| ||| |||||||||||||||||||| Sbjct: 29997 tactccatccgtttctaaatataagtctttt 29967 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 23051 tactccctccgtttctaaatataag 23075
>emb|AJ272313.1|HVU272313 Hordeum vulgare mRNA for gamma tubulin (gtub gene) Length = 2039 Score = 65.9 bits (33), Expect = 7e-08 Identities = 45/49 (91%) Strand = Plus / Plus Query: 252 tgtaatctactccctccctttctaaatataagtctttttagacgtttca 300 ||||||||||||| ||| || |||||||||||||||||||||| ||||| Sbjct: 1899 tgtaatctactccatccgttcctaaatataagtctttttagacatttca 1947
>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence Length = 439641 Score = 63.9 bits (32), Expect = 3e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatataagtctttttagacgtttca 300 |||||||||| | |||||||||||||||||||||||| |||||| Sbjct: 197656 tctactcccttcgtttctaaatataagtctttttagaggtttca 197613 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttagacgtttca 300 |||||||||| |||||||||||||||||||||| | |||||| Sbjct: 30274 tactccctccgtttctaaatataagtctttttacaggtttca 30315 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| ||||||||||||| |||||||||| Sbjct: 208503 tactccctccgtttctaaatataaatctttttaga 208469 Score = 50.1 bits (25), Expect = 0.004 Identities = 31/33 (93%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatataagtctttt 289 |||||||||||| || ||||||||||||||||| Sbjct: 143733 tctactccctccgttactaaatataagtctttt 143701 Score = 42.1 bits (21), Expect = 1.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttttagacgtttcact 302 ||||||||||| || |||||| ||||||||| |||| ||||||| Sbjct: 143567 ctactccctccgttcctaaatgtaagtctttctagaaatttcact 143611
>gb|AF343493.1| Secale cereale clone pla 3-phosphoglycerate kinase (Pgk-1) gene, partial cds; nuclear gene for plastid product Length = 1535 Score = 56.0 bits (28), Expect = 7e-05 Identities = 37/40 (92%) Strand = Plus / Minus Query: 261 ctccctccctttctaaatataagtctttttagacgtttca 300 |||||||| || |||||||||||||||||||||| ||||| Sbjct: 1375 ctccctccgttcctaaatataagtctttttagacatttca 1336
>gb|AF250934.1|AF250934 Hordeum vulgare germin B (GerB) gene, complete cds Length = 2798 Score = 56.0 bits (28), Expect = 7e-05 Identities = 40/44 (90%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| |||||||||||||||||||| ||| ||||||| Sbjct: 389 tactccctccgtttctaaatataagtcttttaagatatttcact 432
>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes, complete cds Length = 65979 Score = 56.0 bits (28), Expect = 7e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || |||||||||||||||||||| |||||||| Sbjct: 47443 tactccctccgttcgtaaatataagtctttttagaggtttcact 47400 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttttagacgtttcact 302 ||||||||||| || ||||||||||||||||| ||| ||||||| Sbjct: 47279 ctactccctccgttcctaaatataagtcttttaagagatttcact 47323
>gb|AY821693.1| Australopyrum velutinum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1595 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| || ||||||||||||||||||||| Sbjct: 1216 tactccctccgttcctaaatataagtctttttaga 1250 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttaga 293 ||||||||| || ||||||||||||||||||||| Sbjct: 1377 tactccctctgttcctaaatataagtctttttaga 1343
>gb|AY821692.1| Australopyrum retrofractum beta amylase gene, partial cds; and Stowaway MITE, complete sequence Length = 1602 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| || ||||||||||||||||||||| Sbjct: 1222 tactccctccgttcctaaatataagtctttttaga 1256 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 273 ctaaatataagtctttttaga 293 ||||||||||||||||||||| Sbjct: 1369 ctaaatataagtctttttaga 1349
>gb|AY013246.1| Hordeum vulgare chromosome 5 BAC 635P2, complete sequence Length = 102433 Score = 54.0 bits (27), Expect = 3e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| || ||||||||||||||||||||| Sbjct: 81136 tactccctccgttcctaaatataagtctttttaga 81170 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataagtctttttagacgtttcact 302 ||||| ||||| || ||||||||||||||||| ||| |||||||| Sbjct: 81301 ctacttcctccgttcctaaatataagtcttttaagaggtttcact 81257 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || |||||||||||||||| |||| ||||||| Sbjct: 89306 tactccctccgttcctaaatataagtctttctagagatttcact 89263 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || |||||||||||||||| |||| ||||||| Sbjct: 14490 tactccctccgttcctaaatataagtctttgtagagatttcact 14533 Score = 46.1 bits (23), Expect = 0.067 Identities = 29/31 (93%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttt 289 |||||||||| || ||||||||||||||||| Sbjct: 89143 tactccctccgttcctaaatataagtctttt 89173 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttaga 293 ||||| |||| || ||||||||||||||||||||| Sbjct: 83465 tactctctccgttcctaaatataagtctttttaga 83499 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Plus Query: 257 tctactccctccctttctaaatataagtctttttaga 293 |||||||||||| || ||||||||||| | ||||||| Sbjct: 66604 tctactccctccgttcctaaatataagaccttttaga 66640
>gb|AF234163.1|AF234163 Hordeum vulgare starch synthase I (SSI) gene, complete cds Length = 8387 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttt 289 |||||||||| |||||||||||||||||||| Sbjct: 251 tactccctccgtttctaaatataagtctttt 281 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| || |||||||||||||||| |||| Sbjct: 416 tactccctccgttcctaaatataagtctttctaga 382
>emb|AJ459252.1|TAE459252 Triticum aestivum TAA1b gene for fatty acyl coA reductase Length = 4308 Score = 54.0 bits (27), Expect = 3e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatataagtctttttagac 294 ||||||||||||| || |||||||||||| ||||||||| Sbjct: 1137 atctactccctccgttcctaaatataagtttttttagac 1099
>gb|DQ324801.1| Hordeum vulgare subsp. vulgare germin B (GerB) gene, promoter and partial cds Length = 1326 Score = 54.0 bits (27), Expect = 3e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttt 289 |||||||||| |||||||||||||||||||| Sbjct: 88 tactccctccgtttctaaatataagtctttt 118
>gb|DQ249273.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC 631P8, complete sequence Length = 101158 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 263 ccctccctttctaaatataagtctttttagacgtttca 300 |||||| || |||||||||||||||||||||| ||||| Sbjct: 71695 ccctccgttcctaaatataagtctttttagacatttca 71732 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || |||||||||||||||| |||| ||||||| Sbjct: 90894 tactccctccgttcctaaatataagtctttgtagagatttcact 90851 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttt 289 ||||||||||| || ||||||||||||||||| Sbjct: 73865 ctactccctccgttcctaaatataagtctttt 73896 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || |||||||||||||||| |||| ||||||| Sbjct: 71854 tactccctccgttcctaaatataagtctttctagagatttcact 71811
>emb|CR626934.1| Triticum aestivum Length = 94398 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttagacgtttca 300 ||||||||| || |||||||||||||||||||||| ||||| Sbjct: 49912 tactccctctgttcctaaatataagtctttttagacatttca 49953
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence Length = 261265 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtcttttta 291 ||||||||||| || ||||||||||||||||||| Sbjct: 136683 ctactccctccgttcctaaatataagtcttttta 136716 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || ||||||||||||||||| ||| ||||||| Sbjct: 309 tactccctccgttcctaaatataagtcttttaagaaatttcact 266 Score = 46.1 bits (23), Expect = 0.067 Identities = 29/31 (93%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttt 289 |||| ||||| |||||||||||||||||||| Sbjct: 190752 tacttcctccgtttctaaatataagtctttt 190782 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtcttttta 291 ||||||||| | || ||||||||||||||||||| Sbjct: 96970 ctactcccttcgttcctaaatataagtcttttta 97003 Score = 44.1 bits (22), Expect = 0.26 Identities = 34/38 (89%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatataagtctttttaga 293 ||||||||||||| || ||||||||||| | ||||||| Sbjct: 1757 atctactccctccgttcctaaatataagaccttttaga 1720 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatataagtctttt 289 |||||| ||||| || ||||||||||||||||| Sbjct: 194502 tctacttcctccgttcctaaatataagtctttt 194470 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataagtctttttaga 293 ||||||||||| ||| |||||||||| | ||||||| Sbjct: 217350 ctactccctccgtttttaaatataagacattttaga 217315 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtcttttt 290 ||||| |||| || |||||||||||||||||| Sbjct: 143342 tactcgctccgttcctaaatataagtcttttt 143311
>gb|AY008692.1| Hordeum vulgare transcription factor GAMyb (Gamyb) gene, complete cds Length = 6228 Score = 52.0 bits (26), Expect = 0.001 Identities = 32/34 (94%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaatataagtctttt 289 ||||||||||||| || ||||||||||||||||| Sbjct: 5153 atctactccctccgttcctaaatataagtctttt 5186 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Plus Query: 255 aatctactccctccctttctaaatataagt 284 |||||||||||||| || |||||||||||| Sbjct: 5229 aatctactccctccgttcctaaatataagt 5258
>gb|AF308474.1|AF308474 Hordeum vulgare asparaginase gene, complete cds Length = 2659 Score = 52.0 bits (26), Expect = 0.001 Identities = 38/42 (90%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttagacgtttca 300 |||||||||| || ||||||||||||||||||| | |||||| Sbjct: 1445 tactccctccattcctaaatataagtctttttaaaggtttca 1486
>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence Length = 108608 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 273 ctaaatataagtctttttagacgtttcact 302 ||||||||||||||||||||| |||||||| Sbjct: 91695 ctaaatataagtctttttagaggtttcact 91724 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || ||||||||||||||||| ||| ||||||| Sbjct: 91844 tactccctccgttcctaaatataagtcttttaagaaatttcact 91801 Score = 46.1 bits (23), Expect = 0.067 Identities = 26/27 (96%) Strand = Plus / Plus Query: 265 ctccctttctaaatataagtcttttta 291 ||||| ||||||||||||||||||||| Sbjct: 18657 ctcccgttctaaatataagtcttttta 18683
>gb|DQ201157.1| Hordeum vulgare subsp. vulgare cultivar Kompolti korai cryptochrome 2 (Cry2) gene, partial cds; and stowaway MITE, complete sequence Length = 2686 Score = 50.1 bits (25), Expect = 0.004 Identities = 40/45 (88%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataagtctttttagacgtttcact 302 ||||||||||| || ||||||||||||||||| ||| ||||||| Sbjct: 1824 ctactccctccgttcctaaatataagtcttttaagatatttcact 1780
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence Length = 103866 Score = 50.1 bits (25), Expect = 0.004 Identities = 34/37 (91%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttttagac 294 ||||||| ||| || |||||||||||||||||||||| Sbjct: 51767 ctactccttccgttcctaaatataagtctttttagac 51803 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| || |||||||||||||||| |||| Sbjct: 51932 tactccctccgttcctaaatataagtctttctaga 51898 Score = 46.1 bits (23), Expect = 0.067 Identities = 29/31 (93%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtcttt 288 ||||||||||| || |||||||||||||||| Sbjct: 23111 ctactccctccgttcctaaatataagtcttt 23141 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||| ||||| || |||||||||||||||| |||| ||||||| Sbjct: 23272 tacttcctccgttcctaaatataagtctttgtagagatttcact 23229
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus region Length = 160897 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataagtctttt 289 ||||||||||| || ||||||||||||||||| Sbjct: 148725 ctactccctccgttcctaaatataagtctttt 148694
>gb|AY643842.1|AY643842S1 Hordeum vulgare subsp. vulgare clone BAC 519K7 hardness locus region Length = 12998 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttt 289 ||||||||||| || ||||||||||||||||| Sbjct: 12668 ctactccctccgttcctaaatataagtctttt 12699 Score = 40.1 bits (20), Expect = 4.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || | |||||||||||||||||| ||||||| Sbjct: 12832 tactccctccgttccataatataagtctttttagagatttcact 12789
>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence Length = 114996 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || |||||||||||||||| |||| ||||||| Sbjct: 67948 tactccctccgttcctaaatataagtctttgtagagatttcact 67905 Score = 46.1 bits (23), Expect = 0.067 Identities = 29/31 (93%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttt 289 |||||||||| || ||||||||||||||||| Sbjct: 93729 tactccctccgttcctaaatataagtctttt 93759 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| || |||||||||||||||| |||| Sbjct: 55721 tactccctccgttcctaaatataagtctttctaga 55687 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||| ||| || ||||||||||||||||||||| Sbjct: 4733 tactccatccgttcctaaatataagtctttttaga 4767 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataagtctttttaga 293 ||||||||||| || | |||||||||||||||||| Sbjct: 93893 ctactccctccgttccataatataagtctttttaga 93858
>gb|DQ201148.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1b) pseudogene, complete sequence Length = 1147 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || |||||||||||||||| |||| ||||||| Sbjct: 440 tactccctccgttcctaaatataagtctttgtagagatttcact 397
>gb|DQ201147.1| Hordeum vulgare subsp. vulgare cultivar Dicktoo phytochrome C (PhyC 1a) pseudogene, complete sequence Length = 1112 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttt 289 ||||||||||| || ||||||||||||||||| Sbjct: 816 ctactccctccgttcctaaatataagtctttt 847
>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H Length = 59748 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttt 289 ||||||||||| || ||||||||||||||||| Sbjct: 23273 ctactccctccgttcctaaatataagtctttt 23304
>emb|Y10814.1|HVPRP4 H.vulgare mRNA for pathogenic related protein 4 Length = 728 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| | |||||||||||||||||| ||| ||||||| Sbjct: 638 tactccctccgtatctaaatataagtcttttaagatatttcact 681
>emb|X56336.1|OSRAMY3A O.sativa RAmy3A gene for alpha-amylase Length = 2625 Score = 48.1 bits (24), Expect = 0.017 Identities = 27/28 (96%) Strand = Plus / Minus Query: 253 gtaatctactccctccctttctaaatat 280 ||||| |||||||||||||||||||||| Sbjct: 1099 gtaatatactccctccctttctaaatat 1072
>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04, complete sequence Length = 143301 Score = 48.1 bits (24), Expect = 0.017 Identities = 33/36 (91%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttttaga 293 ||||||||||| || |||||||||||| |||||||| Sbjct: 41446 ctactccctccgttactaaatataagtatttttaga 41481
>gb|DQ386610.1| Hordeum vulgare subsp. vulgare protein kinase ABC1063 gene, complete cds Length = 7813 Score = 48.1 bits (24), Expect = 0.017 Identities = 36/40 (90%) Strand = Plus / Minus Query: 254 taatctactccctccctttctaaatataagtctttttaga 293 |||| |||||||||| || |||||||||||||||| |||| Sbjct: 2360 taatatactccctccgttcctaaatataagtctttctaga 2321
>gb|AY641411.1| Hordeum vulgare subsp. vulgare Rph15.1 (Rph15.1) pseudogene, complete cds Length = 15688 Score = 48.1 bits (24), Expect = 0.017 Identities = 33/36 (91%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttttaga 293 |||||||||| || ||||||||||||||||||||| Sbjct: 8720 ctactccctcagttcctaaatataagtctttttaga 8755
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 48.1 bits (24), Expect = 0.017 Identities = 33/36 (91%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttttaga 293 ||||||||||| || |||||||||||| |||||||| Sbjct: 20310813 ctactccctccgttactaaatataagtatttttaga 20310848 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatat 280 |||||||||||||||||||||| Sbjct: 5118114 tactccctccctttctaaatat 5118135 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 ggttgtaatctactccctccctttctaaatat 280 |||||| || |||||||||| ||||||||||| Sbjct: 34744778 ggttgtcatatactccctccgtttctaaatat 34744809 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 tttctaaatataagtctttttaga 293 |||||||||||||||| ||||||| Sbjct: 20037832 tttctaaatataagtcattttaga 20037809
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.017 Identities = 27/28 (96%) Strand = Plus / Minus Query: 253 gtaatctactccctccctttctaaatat 280 ||||| |||||||||||||||||||||| Sbjct: 17235131 gtaatatactccctccctttctaaatat 17235104
>gb|DQ351213.1| Hordeum vulgare subsp. vulgare resistance protein (ABC1037) gene, complete cds Length = 25080 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| | ||||||||||||||||||||| ||||||| Sbjct: 22020 tactccctccgatcctaaatataagtctttttagagatttcact 21977 Score = 46.1 bits (23), Expect = 0.067 Identities = 35/39 (89%) Strand = Plus / Plus Query: 255 aatctactccctccctttctaaatataagtctttttaga 293 |||||||||||||| || ||||||||||| | ||||||| Sbjct: 5362 aatctactccctccgttcctaaatataagaccttttaga 5400 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 tctactccctccctttctaaatataagtcttt 288 ||||||||||| || |||||||||||||||| Sbjct: 21855 tctactccctctgttcctaaatataagtcttt 21886
>dbj|AP005891.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1045B05 Length = 140992 Score = 48.1 bits (24), Expect = 0.017 Identities = 27/28 (96%) Strand = Plus / Minus Query: 253 gtaatctactccctccctttctaaatat 280 ||||| |||||||||||||||||||||| Sbjct: 22003 gtaatatactccctccctttctaaatat 21976
>emb|AJ400714.1|TAE400714 Triticum aestivum vp1D gene for VIVIPAROUS1, exons 1-6 Length = 4230 Score = 48.1 bits (24), Expect = 0.017 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttagacgtttcact 302 |||||||||| || |||||||||||||||| |||| ||||||| Sbjct: 2785 tactccctccattcctaaatataagtctttgtagagatttcact 2828 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtcttt 288 |||||||||| || |||||||||||||||| Sbjct: 2946 tactccctccgttcctaaatataagtcttt 2917
>gb|AF122050.1|AF122050 Hordeum vulgare limit dextrinase gene, complete cds Length = 11462 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtcttttt 290 |||||||||| || |||||||||||||||||| Sbjct: 3660 tactccctccgttcctaaatataagtcttttt 3629
>dbj|AB058924.1| Hordeum vulgare gene for protein kinase HvPKABA1, complete cds, cultivar:Igri Length = 11684 Score = 48.1 bits (24), Expect = 0.017 Identities = 30/32 (93%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtcttttt 290 |||||||||| || |||||||||||||||||| Sbjct: 7564 tactccctccgttcctaaatataagtcttttt 7533
>gb|AC144375.14| Medicago truncatula clone mth2-11p13, complete sequence Length = 123953 Score = 46.1 bits (23), Expect = 0.067 Identities = 26/27 (96%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagt 284 ||||||||||| ||||||||||||||| Sbjct: 76104 ctactccctccgtttctaaatataagt 76130
>gb|AY972619.1| Hordeum vulgare subsp. vulgare cultivar Morex subclone NRG098 cyclic nucleotide-gated ion channel 4 (Nec1) gene, complete cds Length = 9090 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| || ||||||||||| ||||||||| Sbjct: 346 tactccctccgttcctaaatataagactttttaga 312
>gb|AF338431.1|AF338431 Aegilops tauschii starch branching enzyme IIa gene, complete cds Length = 11475 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| || |||||||||||||||| |||| Sbjct: 8567 tactccctccgttcctaaatataagtctttgtaga 8601 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtct 286 |||||||||| || |||||||||||||| Sbjct: 8723 tactccctccgttcctaaatataagtct 8696
>gb|U87149.1|HVU87149 Hordeum vulgare nucellin gene, complete cds Length = 3686 Score = 46.1 bits (23), Expect = 0.067 Identities = 29/31 (93%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttt 289 |||||||||| || ||||||||||||||||| Sbjct: 2180 tactccctccgttcctaaatataagtctttt 2150 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtctttttaga 293 ||||||||||| || | |||||||||||||||||| Sbjct: 2016 ctactccctccgttccataatataagtctttttaga 2051
>gb|DQ154923.1| Hordeum vulgare RAB7 (RAB7) gene, exons 1 through 6 and partial cds; and delta-1-pyrroline-5-carboxylate dehydrogenase (P5CDH) gene, complete cds Length = 13878 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagtctttttaga 293 ||||| |||| || ||||||||||||||||||||| Sbjct: 7574 tactcactccgttcctaaatataagtctttttaga 7540 Score = 46.1 bits (23), Expect = 0.067 Identities = 32/35 (91%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtctttttaga 293 |||||||||| || ||||||||| ||||||||||| Sbjct: 7413 tactccctccattcctaaatataggtctttttaga 7447
>gb|BT000742.1| Arabidopsis thaliana putative spermidine synthase (At5g53120) mRNA, complete cds Length = 1447 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 270 tttctaaatataagtcttttta 291 |||||||||||||||||||||| Sbjct: 1434 tttctaaatataagtcttttta 1413
>gb|AC133139.23| Medicago truncatula clone mth1-8d23, complete sequence Length = 121016 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataag 283 ||||||||||| |||||||||||||| Sbjct: 91313 ctactccctccgtttctaaatataag 91288
>gb|AC133572.35| Medicago truncatula clone mth2-10o11, complete sequence Length = 108164 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagt 284 |||||||||| ||||||||||||||| Sbjct: 35300 tactccctccgtttctaaatataagt 35325
>gb|AC136503.46| Medicago truncatula clone mth2-15n1, complete sequence Length = 117475 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataagt 284 |||||||||| ||||||||||||||| Sbjct: 71592 tactccctccgtttctaaatataagt 71567
>gb|AC145061.27| Medicago truncatula clone mth2-6a18, complete sequence Length = 139522 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagt 284 |||||||||| ||||||||||||||| Sbjct: 122377 tactccctccgtttctaaatataagt 122402
>gb|AC150981.14| Medicago truncatula clone mth2-166m22, complete sequence Length = 116485 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataag 283 |||||||||||||||| ||||||||| Sbjct: 54498 ctactccctccctttcaaaatataag 54523
>gb|AC122727.24| Medicago truncatula clone mth2-13b8, complete sequence Length = 128564 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataag 283 ||||||||||| |||||||||||||| Sbjct: 37251 ctactccctccgtttctaaatataag 37276
>gb|AC147407.10| Medicago truncatula clone mth2-159b14, complete sequence Length = 115857 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Minus Query: 254 taatctactccctccctttctaaatataag 283 |||| |||||||||| |||||||||||||| Sbjct: 107505 taatatactccctccgtttctaaatataag 107476 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 107352 tactccctccgtttctaaatataag 107376
>emb|AL731589.3|OSJN00239 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0039G19, complete sequence Length = 144144 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatat 280 |||||||||||||||||||||| Sbjct: 94387 tactccctccctttctaaatat 94408
>gb|AF460219.1| Hordeum vulgare subsp. vulgare nuclear transcription factor SLN1 gene, complete cds Length = 4098 Score = 44.1 bits (22), Expect = 0.26 Identities = 34/38 (89%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaatataagtctttttaga 293 ||||||||||||| || ||||||||||| | ||||||| Sbjct: 700 atctactccctccgttcctaaatataagaccttttaga 737
>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence Length = 125707 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataag 283 ||||||||||| |||||||||||||| Sbjct: 123103 ctactccctccgtttctaaatataag 123128
>gb|AC166898.17| Medicago truncatula clone mth2-70l3, complete sequence Length = 100341 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataag 283 ||||||||||| |||||||||||||| Sbjct: 87235 ctactccctccgtttctaaatataag 87210
>gb|AC135319.28| Medicago truncatula clone mth2-6g4, complete sequence Length = 120194 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagt 284 |||||||||| ||||||||||||||| Sbjct: 73666 tactccctccgtttctaaatataagt 73691
>gb|AC147963.2| Medicago truncatula chromosome 1 BAC clone mth2-42e19, complete sequence Length = 106951 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataag 283 ||||||||||| |||||||||||||| Sbjct: 80247 ctactccctccgtttctaaatataag 80222
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 252 tgtaatctactccctccctttctaaatataagtc 285 ||||||||||||||||| |||| |||||||||| Sbjct: 3150769 tgtaatctactccctccgtttcacaatataagtc 3150802 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatat 280 ||||||||||||| ||||||||||| Sbjct: 16247802 atctactccctccgtttctaaatat 16247778 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ttctaaatataagtctttttagac 294 ||||||||||||||| |||||||| Sbjct: 4470252 ttctaaatataagtcattttagac 4470275 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tctactccctccctttctaaatat 280 |||||||||||| ||||||||||| Sbjct: 2638777 tctactccctccgtttctaaatat 2638800
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.26 Identities = 34/38 (89%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatataagtctttttagac 294 |||||||| ||| |||| |||||||| ||||||||||| Sbjct: 28896726 tctactccatccgtttcaaaatataattctttttagac 28896689 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatat 280 |||||||||||||||||||||| Sbjct: 537834 tactccctccctttctaaatat 537813 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatataagtctttttag 292 ||||||||||||| |||| |||||||| |||||||| Sbjct: 30279551 atctactccctccgtttcacaatataagactttttag 30279515
>gb|AC106860.6| Homo sapiens BAC clone RP13-488D7 from 4, complete sequence Length = 180424 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 83 cttttttgtattttattactgt 104 |||||||||||||||||||||| Sbjct: 174922 cttttttgtattttattactgt 174943
>dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0004I20 Length = 94135 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatat 280 |||||||||||||||||||||| Sbjct: 14451 tactccctccctttctaaatat 14430
>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0514G12 Length = 138929 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatat 280 |||||||||||||||||||||| Sbjct: 83342 tactccctccctttctaaatat 83321
>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0468G03 Length = 143918 Score = 44.1 bits (22), Expect = 0.26 Identities = 34/38 (89%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatataagtctttttagac 294 |||||||| ||| |||| |||||||| ||||||||||| Sbjct: 46770 tctactccatccgtttcaaaatataattctttttagac 46733
>gb|AF181459.1|AF181459 Hordeum vulgare dehydrin (Dhn9) gene, complete cds Length = 1791 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Plus Query: 257 tctactccctccctttctaaatataagtct 286 |||||||||||| || |||||||||||||| Sbjct: 1513 tctactccctccgttactaaatataagtct 1542
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Plus Query: 252 tgtaatctactccctccctttctaaatataagtc 285 ||||||||||||||||| |||| |||||||||| Sbjct: 3150714 tgtaatctactccctccgtttcacaatataagtc 3150747 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatat 280 ||||||||||||| ||||||||||| Sbjct: 16201035 atctactccctccgtttctaaatat 16201011 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 271 ttctaaatataagtctttttagac 294 ||||||||||||||| |||||||| Sbjct: 4470233 ttctaaatataagtcattttagac 4470256 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tctactccctccctttctaaatat 280 |||||||||||| ||||||||||| Sbjct: 2638721 tctactccctccgtttctaaatat 2638744
>emb|AL731748.3|CNS08C7X Oryza sativa chromosome 12, . BAC OSJNBa0095K18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 159711 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Minus Query: 252 tgtaatctactccctccctttctaaatataagtc 285 ||||||||||||||||| |||| |||||||||| Sbjct: 4074 tgtaatctactccctccgtttcacaatataagtc 4041
>emb|AL713906.3|CNS07YQ6 Oryza sativa chromosome 12, . BAC OJ1587_D05 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 90756 Score = 44.1 bits (22), Expect = 0.26 Identities = 31/34 (91%) Strand = Plus / Minus Query: 252 tgtaatctactccctccctttctaaatataagtc 285 ||||||||||||||||| |||| |||||||||| Sbjct: 66895 tgtaatctactccctccgtttcacaatataagtc 66862
>emb|CT030168.3| M.truncatula DNA sequence from clone MTH2-16A18 on chromosome 3, complete sequence Length = 125291 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Plus Query: 254 taatctactccctccctttctaaatataag 283 |||| |||||||||| |||||||||||||| Sbjct: 87016 taatatactccctccgtttctaaatataag 87045 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 87169 tactccctccgtttctaaatataag 87145
>dbj|D50641.1| Hordeum vulgare DNA for plant metallothionein-like protein, complete cds Length = 1819 Score = 44.1 bits (22), Expect = 0.26 Identities = 28/30 (93%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtcttt 288 |||||||||| ||| ||||||||||||||| Sbjct: 318 tactccctccgtttttaaatataagtcttt 347
>gb|AC154113.1| Medicago truncatula chromosome 2 BAC clone mte1-25a23, complete sequence Length = 42983 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 17766 tactccctccgtttctaaatataag 17742
>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence Length = 153766 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctaaatataagtctttttaga 293 ||||||||||||||||||||| Sbjct: 8574 ctaaatataagtctttttaga 8594
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and SNF2P genes, complete cds; nucellin pseudogene, complete sequence; putative transposase, phosphatidylinositol phosphatidylcholine transfer protein sec14 cytosolic-like protein, and phytochrome P450-like protein genes, complete cds; and unknown genes Length = 438828 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctaaatataagtctttttaga 293 ||||||||||||||||||||| Sbjct: 260172 ctaaatataagtctttttaga 260192
>gb|AY133250.1|AY133250S1 Hordeum vulgare subsp. vulgare starch synthase II gene, exons 1 through 8 Length = 4976 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataagtcttttta 291 |||| ||||| || ||||||||||||||||||| Sbjct: 2208 tactgcctccattcctaaatataagtcttttta 2240
>gb|AC120885.3| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0042J05, complete sequence Length = 150295 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 265 ctccctttctaaatataagtctttt 289 |||||||||||||||||||| |||| Sbjct: 8375 ctccctttctaaatataagtatttt 8399
>gb|DQ469712.1| Hordeum vulgare subsp. vulgare serine/threonine kinase-like protein ABC1036 gene, complete cds Length = 29663 Score = 42.1 bits (21), Expect = 1.0 Identities = 39/45 (86%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataagtctttttagacgtttcact 302 ||||||| ||| || |||||| |||||||||||||| ||| |||| Sbjct: 17251 ctactccatccattcctaaatgtaagtctttttagaggttccact 17207
>gb|AC161399.2| Medicago truncatula chromosome 2 BAC clone mte1-30k4, complete sequence Length = 172016 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 123747 tactccctccgtttctaaatataag 123723
>gb|AC123571.8| Medicago truncatula clone mth1-14n3, complete sequence Length = 84556 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 37183 tactccctccatttctaaatataag 37159
>gb|AC140023.13| Medicago truncatula clone mth2-32h4, complete sequence Length = 152468 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 65081 tactccctccgtttctaaatataag 65057
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence Length = 118633 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 23846 tactccctccgtttctaaatataag 23870
>gb|AC148237.7| Medicago truncatula clone mth2-1o14, complete sequence Length = 116678 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 56832 tactccctccatttctaaatataag 56856
>gb|AC147498.14| Medicago truncatula clone mth2-6f18, complete sequence Length = 135726 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Plus Query: 252 tgtaatctactccctccctttctaaatataagt 284 ||||| ||||||||||| |||| |||||||||| Sbjct: 3922 tgtaaactactccctccgtttcaaaatataagt 3954
>emb|CR954187.2| Medicago truncatula chromosome 5 clone mth2-181i2, COMPLETE SEQUENCE Length = 128654 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 100765 tactccctccgtttctaaatataag 100789
>emb|AL355615.12| Human DNA sequence from clone RP11-33E24 on chromosome 6 Contains a ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) pseudogene, two novel genes, a pseudogene similar to part of heat shock 90kD protein 1, beta (HSPCB) and a CpG island, complete sequence Length = 178362 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 270 tttctaaatataagtcttttt 290 ||||||||||||||||||||| Sbjct: 110505 tttctaaatataagtcttttt 110485
>emb|AJ237609.1|BRE237609 Borrelia recurrentis vmpA1 gene, silent copy Length = 2152 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 ttccttttttgtattttatta 100 ||||||||||||||||||||| Sbjct: 1490 ttccttttttgtattttatta 1510
>emb|AJ237608.1|BRE237608 Borrelia recurrentis vmpA1 gene, expressed copy Length = 1700 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 80 ttccttttttgtattttatta 100 ||||||||||||||||||||| Sbjct: 1326 ttccttttttgtattttatta 1346
>emb|CR376848.7| Zebrafish DNA sequence from clone CH211-197K23 in linkage group 24, complete sequence Length = 218909 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 92 attttattactgtataaaata 112 ||||||||||||||||||||| Sbjct: 66386 attttattactgtataaaata 66366
>gb|AC130610.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0478F09, complete sequence Length = 145070 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaatat 280 ||||||||||||| ||||||||||| Sbjct: 79164 atctactccctccgtttctaaatat 79188
>gb|AC151822.29| Medicago truncatula clone mth2-32h21, complete sequence Length = 118094 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 32695 tactccctccatttctaaatataag 32671
>gb|AC150798.3| Medicago truncatula chromosome 2 BAC clone mth2-33b11, complete sequence Length = 120992 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 95573 tactccctccgtttctaaatataag 95549
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 265 ctccctttctaaatataagtctttt 289 |||||||||||||||||||| |||| Sbjct: 22992372 ctccctttctaaatataagtatttt 22992396
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaatat 280 ||||||||||||| ||||||||||| Sbjct: 4711159 atctactccctccgtttctaaatat 4711183 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatat 280 |||||||||||| ||||||||||| Sbjct: 5911200 tctactccctccgtttctaaatat 5911177 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaatataag 283 ||||||||||||| | |||||||||||| Sbjct: 4588955 atctactccctccgtctctaaatataag 4588982
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaatat 280 ||||||||||||| ||||||||||| Sbjct: 29726116 atctactccctccatttctaaatat 29726140 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 252 tgtaatctactccctccctttctaaatataag 283 ||||||||||||||||| |||| |||||||| Sbjct: 30605310 tgtaatctactccctccgtttcataatataag 30605341
>gb|AC157525.2| Pan troglodytes BAC clone CH251-519D18 from chromosome unknown, complete sequence Length = 234137 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 91 tattttattactgtataaaat 111 ||||||||||||||||||||| Sbjct: 126843 tattttattactgtataaaat 126823
>gb|AC097495.3| Homo sapiens BAC clone RP11-304A15 from 2, complete sequence Length = 163994 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 261 ctccctccctttctaaatata 281 ||||||||||||||||||||| Sbjct: 59648 ctccctccctttctaaatata 59628
>gb|AC155880.3| Medicago truncatula chromosome 2 BAC clone mte1-55i22, complete sequence Length = 118734 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 94702 tactccctccatttctaaatataag 94726
>dbj|AP004047.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1191_G08 Length = 172832 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaatat 280 ||||||||||||| ||||||||||| Sbjct: 95095 atctactccctccatttctaaatat 95119
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 269 ctttctaaatataagtctttt 289 ||||||||||||||||||||| Sbjct: 666992 ctttctaaatataagtctttt 667012
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete sequence Length = 187012 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 273 ctaaatataagtctttttaga 293 ||||||||||||||||||||| Sbjct: 17182 ctaaatataagtctttttaga 17202
>dbj|AP007231.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0535F09 Length = 175050 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatataagtctttttag 292 ||||||||||||| |||| |||||||| |||||||| Sbjct: 145886 atctactccctccgtttcacaatataagactttttag 145850
>dbj|AP003685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548E04 Length = 138037 Score = 42.1 bits (21), Expect = 1.0 Identities = 33/37 (89%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatataagtctttttag 292 ||||||||||||| |||| |||||||| |||||||| Sbjct: 26146 atctactccctccgtttcacaatataagactttttag 26110
>emb|AJ512944.1|HVU512944 Hordeum vulgare cor14b gene for cold regulated protein Length = 1395 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 1369 tactccctccgtttctaaatataag 1393
>emb|BX571970.20| Zebrafish DNA sequence from clone DKEY-276G11 in linkage group 7, complete sequence Length = 170614 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 ttttttgtattttattactgt 104 ||||||||||||||||||||| Sbjct: 95833 ttttttgtattttattactgt 95853
>gb|AC102099.14| Mus musculus chromosome 5, clone RP23-52A2, complete sequence Length = 235239 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 89 tgtattttattactgtataaa 109 ||||||||||||||||||||| Sbjct: 86702 tgtattttattactgtataaa 86722
>gb|AC006249.1|AC006249 Homo sapiens chromosome 18, clone hRPK.430_E_17, complete sequence Length = 197082 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 91 tattttattactgtataaaat 111 ||||||||||||||||||||| Sbjct: 94580 tattttattactgtataaaat 94600
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 265 ctccctttctaaatataagtctttt 289 |||||||||||||||||||| |||| Sbjct: 23302282 ctccctttctaaatataagtatttt 23302306
>emb|BX672566.2|CNS09SC4 Oryza sativa chromosome 12, . Partial sequence from BAC B1004E12 of chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 24190 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatat 280 ||||||||||||| ||||||||||| Sbjct: 17657 atctactccctccgtttctaaatat 17633
>gb|M60732.1|BLYCLDAA Hordeum vulgare cold-regulated mRNA, 3' end Length = 653 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataag 283 |||||||||| |||||||||||||| Sbjct: 603 tactccctccgtttctaaatataag 627
>emb|AL929382.9| Mouse DNA sequence from clone RP23-136C24 on chromosome X, complete sequence Length = 201060 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 138 tattattagctgctgatattt 158 ||||||||||||||||||||| Sbjct: 35800 tattattagctgctgatattt 35780
>gb|AC092778.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015G17, complete sequence Length = 158173 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaata 279 ||||||||||||| |||||||||| Sbjct: 121882 atctactccctccgtttctaaata 121859
>gb|AC132493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0636E04, complete sequence Length = 141171 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatat 280 |||||||||||| ||||||||||| Sbjct: 48774 tctactccctccgtttctaaatat 48751
>gb|AC144738.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0029B02, complete sequence Length = 156649 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaatataag 283 ||||||||||||| | |||||||||||| Sbjct: 99422 atctactccctccgtctctaaatataag 99449
>gb|AC115028.17| Mus musculus chromosome 5, clone RP24-245G22, complete sequence Length = 188423 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 actccctccctttctaaata 279 |||||||||||||||||||| Sbjct: 324 actccctccctttctaaata 343
>gb|AC182813.8| Medicago truncatula clone mth2-69k1, complete sequence Length = 131049 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatataag 283 ||||||||||||| |||| ||||||||| Sbjct: 4263 atctactccctccgtttcaaaatataag 4236
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaata 279 ||||||||||||| |||||||||| Sbjct: 22226936 atctactccctccgtttctaaata 22226959
>gb|AC118545.20| Mus musculus strain C57BL/6J clone rp23-324o14 map 17, complete sequence Length = 236365 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccctccctttctaaatataa 282 |||||||||||||||||||| Sbjct: 221074 ccctccctttctaaatataa 221093
>emb|CR956392.5| M.truncatula DNA sequence from clone MTH2-52P12 on chromosome 3, complete sequence Length = 115163 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataa 282 |||||||||| ||||||||||||| Sbjct: 101284 tactccctccgtttctaaatataa 101261
>gb|AC121843.3| Mus musculus BAC clone RP24-80P19 from chromosome 5, complete sequence Length = 196947 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 260 actccctccctttctaaata 279 |||||||||||||||||||| Sbjct: 123223 actccctccctttctaaata 123242
>gb|AC153352.19| Medicago truncatula clone mth2-103l4, complete sequence Length = 130178 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataa 282 |||||||||| ||||||||||||| Sbjct: 93088 tactccctccgtttctaaatataa 93065
>gb|AC161864.9| Medicago truncatula clone mth2-69d21, complete sequence Length = 133324 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataa 282 |||||||||| ||||||||||||| Sbjct: 88384 tactccctccgtttctaaatataa 88407
>gb|AC129092.13| Medicago truncatula clone mth2-17n16, complete sequence Length = 104281 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataa 282 |||||||||| ||||||||||||| Sbjct: 25465 tactccctccgtttctaaatataa 25488
>gb|AC127021.25| Medicago truncatula clone mth2-5e5, complete sequence Length = 139116 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatataagt 284 |||||||||||| ||| ||||||||||| Sbjct: 104339 tctactccctccatttttaaatataagt 104312
>emb|X99705.1|TAPALGEN1 T.aestivum PAL gene Length = 3444 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtc 285 |||||||||| |||||||||||||||| Sbjct: 51 ctactccctctgtttctaaatataagtc 78
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence Length = 112404 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 tttctaaatataagtctttttaga 293 |||||||||||||||| ||||||| Sbjct: 7736 tttctaaatataagtcattttaga 7713
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 270 tttctaaatataagtctttttaga 293 |||||||||||||||| ||||||| Sbjct: 100495 tttctaaatataagtcattttaga 100472
>emb|AL606456.2|OSJN00017 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0017I01, complete sequence Length = 133331 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 249 ggttgtaatctactccctccctttctaaatat 280 |||||| || |||||||||| ||||||||||| Sbjct: 50339 ggttgtcatatactccctccgtttctaaatat 50370
>emb|CR932962.2| Medicago truncatula chromosome 5 clone mte1-70c24, COMPLETE SEQUENCE Length = 128704 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataa 282 |||||||||| ||||||||||||| Sbjct: 59625 tactccctccgtttctaaatataa 59648
>emb|BX664602.11| Zebrafish DNA sequence from clone DKEY-31C18 in linkage group 6, complete sequence Length = 171498 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 attattagctgctgatatttggtt 162 |||||||| ||||||||||||||| Sbjct: 130961 attattagatgctgatatttggtt 130984
>gb|AC128649.5| Homo sapiens 12 BAC RP11-728G4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 167071 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 ctgtaaagtttcttaagtta 182 |||||||||||||||||||| Sbjct: 83331 ctgtaaagtttcttaagtta 83350
>emb|BX649406.10| Zebrafish DNA sequence from clone CH211-203N20 in linkage group 4 Contains two CpG islands, complete sequence Length = 141237 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 attactgtataaaataataa 116 |||||||||||||||||||| Sbjct: 31485 attactgtataaaataataa 31504
>emb|BX004823.23| Zebrafish DNA sequence from clone DKEY-13A3 in linkage group 14, complete sequence Length = 197683 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 attattagctgctgatatttggtt 162 |||||||| ||||||||||||||| Sbjct: 178932 attattagatgctgatatttggtt 178955
>gb|AC128657.2| Homo sapiens 12 BAC RP11-1079J22 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 60001 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ctgtaaagtttcttaagtta 182 |||||||||||||||||||| Sbjct: 26034 ctgtaaagtttcttaagtta 26015
>emb|AL954137.18| Zebrafish DNA sequence from clone CH211-222L21 in linkage group 11, complete sequence Length = 222163 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 82 ccttttttgtattttattac 101 |||||||||||||||||||| Sbjct: 92840 ccttttttgtattttattac 92821
>gb|AC153121.15| Medicago truncatula clone mth2-80o14, complete sequence Length = 115074 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 256 atctactccctccctttctaaatataag 283 ||||||||||||| |||| ||||||||| Sbjct: 95667 atctactccctccgtttcaaaatataag 95640
>gb|AC018390.5| Homo sapiens chromosome , clone RP11-11E23, complete sequence Length = 167130 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 80 ttccttttttgtattttatt 99 |||||||||||||||||||| Sbjct: 100140 ttccttttttgtattttatt 100121
>gb|AC108046.3| Homo sapiens BAC clone RP11-308K2 from 4, complete sequence Length = 177483 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 85 tttttgtattttattactgtataa 108 ||||||||| |||||||||||||| Sbjct: 93851 tttttgtatattattactgtataa 93828
>gb|AC095063.2| Homo sapiens BAC clone RP11-533K12 from 4, complete sequence Length = 153814 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 93 ttttattactgtataaaata 112 |||||||||||||||||||| Sbjct: 79131 ttttattactgtataaaata 79112
>gb|AC104185.2| Homo sapiens chromosome 3 clone RP11-268J19, complete sequence Length = 165918 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ttccttttttgtattttatt 99 |||||||||||||||||||| Sbjct: 53571 ttccttttttgtattttatt 53590
>gb|AC016194.7| Homo sapiens chromosome 8, clone RP11-24F20, complete sequence Length = 146768 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 80 ttccttttttgtattttatt 99 |||||||||||||||||||| Sbjct: 142267 ttccttttttgtattttatt 142286
>gb|AY641412.1| Hordeum vulgare subsp. vulgare retrotransposon Sandra5, complete sequence; splicing factor SF2-like protein (SF2) and universal stress protein (USP1) genes and Hv receptor-kinase-like pseudogene, complete cds; and retrotransposons Sandra6 and Sandra7, complete sequence Length = 82293 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 257 tctactccctccctttctaaatataagtcttt 288 |||||||||||| || ||||||||||||||| Sbjct: 50467 tctactccctccgttcttaaatataagtcttt 50498
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatataagtctttttag 292 |||||||||||| |||| ||||||||| ||||||| Sbjct: 16951185 tctactccctccatttcaaaatataagcatttttag 16951150
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ttggttctgtaaagtttctt 176 |||||||||||||||||||| Sbjct: 13844754 ttggttctgtaaagtttctt 13844773 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 255 aatctactccctccctttctaaatataagtcttttt 290 |||||||||||||| |||| || |||||||| |||| Sbjct: 5969001 aatctactccctccgtttcaaattataagtcgtttt 5969036 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatat 280 |||||||||||| ||||||||||| Sbjct: 4243915 tctactccctccatttctaaatat 4243892
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 256 atctactccctccctttctaaata 279 ||||||||||||| |||||||||| Sbjct: 22219965 atctactccctccgtttctaaata 22219988
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataa 282 |||||||||| ||||||||||||| Sbjct: 32108926 tactccctccgtttctaaatataa 32108949
>dbj|AP003274.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0512C01 Length = 176261 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 259 tactccctccctttctaaatataa 282 |||||||||| ||||||||||||| Sbjct: 150740 tactccctccgtttctaaatataa 150763
>gb|AC026815.8|AC026815 Oryza sativa chromosome 10 BAC OSJNBa0079L16 genomic sequence, complete sequence Length = 147452 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatataagtctttttag 292 |||||||||||| |||| ||||||||| ||||||| Sbjct: 135637 tctactccctccatttcaaaatataagcatttttag 135602
>gb|DQ352178.1| Hordeum vulgare subsp. vulgare rust resistance gene ABC1041 (ABC1041) gene, complete cds Length = 8735 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataagtctttttaga 293 ||||||||||| || ||||||||||| | ||||||| Sbjct: 5803 ctactccctccgttcctaaatataagaccttttaga 5768
>gb|AF474982.1| Hordeum vulgare clone BAC 011009, complete sequence Length = 77136 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataa 282 |||||||||| ||||||||||||| Sbjct: 56938 tactccctccgtttctaaatataa 56915
>dbj|AP005098.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0008C11 Length = 157205 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 255 aatctactccctccctttctaaatataagtcttttt 290 |||||||||||||| |||| || |||||||| |||| Sbjct: 24171 aatctactccctccgtttcaaattataagtcgtttt 24206
>dbj|AP003748.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1136_A05 Length = 120823 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 255 aatctactccctccctttctaaatataagtcttttt 290 |||||||||||||| |||| || |||||||| |||| Sbjct: 111449 aatctactccctccgtttcaaattataagtcgtttt 111484
>dbj|AP005690.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0052I14 Length = 168285 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ttggttctgtaaagtttctt 176 |||||||||||||||||||| Sbjct: 129918 ttggttctgtaaagtttctt 129937
>dbj|AP003800.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1014_E09 Length = 184624 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatat 280 |||||||||||| ||||||||||| Sbjct: 64969 tctactccctccatttctaaatat 64946
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 252 tgtaatctactccctccctttctaaatataag 283 ||||||||||||||||| |||| |||||||| Sbjct: 117318 tgtaatctactccctccgtttcataatataag 117349
>emb|BX000987.6| Zebrafish DNA sequence from clone CH211-130P10 in linkage group 15, complete sequence Length = 152072 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 139 attattagctgctgatatttggtt 162 |||||||| ||||||||||||||| Sbjct: 53909 attattagatgctgatatttggtt 53886
>gb|AC153997.3| Mus musculus 6 BAC RP24-571G22 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 150676 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 97 attactgtataaaataataa 116 |||||||||||||||||||| Sbjct: 75871 attactgtataaaataataa 75852
>emb|CR962123.2| Medicago truncatula chromosome 5 clone mth2-167a19, COMPLETE SEQUENCE Length = 128818 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 259 tactccctccctttctaaatataa 282 |||||||||| ||||||||||||| Sbjct: 53873 tactccctccgtttctaaatataa 53850
>gb|AY642926.1| Hordeum vulgare BAC CC24_14, complete sequence Length = 184425 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 258 ctactccctccctttctaaatataagtctttttaga 293 ||||||||||| || ||||||||||| | ||||||| Sbjct: 178141 ctactccctccgttcctaaatataagacattttaga 178106
>gb|AC091484.8| Mus musculus strain C57BL/6J chromosome 17 clone rp23-386a1, complete sequence Length = 205343 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ccctccctttctaaatataa 282 |||||||||||||||||||| Sbjct: 115085 ccctccctttctaaatataa 115104
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.1 Identities = 32/36 (88%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatataagtctttttag 292 |||||||||||| |||| ||||||||| ||||||| Sbjct: 16960225 tctactccctccatttcaaaatataagcatttttag 16960190
>emb|AL954157.3|CNS08CCV Oryza sativa chromosome 12, . BAC OSJNBa0042N11 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 168699 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 271 ttctaaatataagtctttttagac 294 ||||||||||||||| |||||||| Sbjct: 34244 ttctaaatataagtcattttagac 34221
>emb|AL929350.3|CNS08CCE Oryza sativa chromosome 12, . BAC OSJNBb0104J15 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 136490 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 257 tctactccctccctttctaaatat 280 |||||||||||| ||||||||||| Sbjct: 29232 tctactccctccgtttctaaatat 29209
>emb|AL928830.10| Zebrafish DNA sequence from clone CH211-119E16, complete sequence Length = 182614 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 89 tgtattttattactgtataaaataataa 116 ||||| ||||||||||||||||| |||| Sbjct: 123242 tgtatattattactgtataaaattataa 123269
>emb|AL954632.3|CNS08CD0 Oryza sativa chromosome 12, . BAC OSJNBa0031E02 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 151878 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 257 tctactccctccctttctaaatat 280 |||||||||||| ||||||||||| Sbjct: 7703 tctactccctccgtttctaaatat 7726
>dbj|AP008952.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT45D07, TM0932b, complete sequence Length = 74001 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 258 ctactccctccctttctaaatataagtc 285 ||||||||||| |||||| ||||||||| Sbjct: 35636 ctactccctccgtttctatatataagtc 35663
>emb|AL807393.10| Mouse DNA sequence from clone RP23-142A9 on chromosome X, complete sequence Length = 147187 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 80 ttccttttttgtattttattactg 103 |||||||| ||||||||||||||| Sbjct: 25374 ttccttttatgtattttattactg 25397 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,244,064 Number of Sequences: 3902068 Number of extensions: 4244064 Number of successful extensions: 96636 Number of sequences better than 10.0: 165 Number of HSP's better than 10.0 without gapping: 175 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 95246 Number of HSP's gapped (non-prelim): 1390 length of query: 312 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 290 effective length of database: 17,147,199,772 effective search space: 4972687933880 effective search space used: 4972687933880 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
