ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8i04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC108763.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone OSJNBb0004A05, complete sequence Length = 157913 Score = 708 bits (357), Expect = 0.0 Identities = 564/633 (89%) Strand = Plus / Plus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| || || || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 113997 cagtgggcctgctctcgttcttttggcctaggtactcgcattccatgggatgagcagttc 114056 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacaccatcgctcatcat 121 || ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||| | | Sbjct: 114057 cttgtagaatctctttctgattccaccctctacatggcatattacacaatcgctcacctt 114116 Query: 122 ctacaaaatggtaatatgtatggacaagaaatatcttctatcaagccagaagaaatgaca 181 | |||||||| || |||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 114117 ttgcaaaatggcaacatgtatggcaaggaaatatcttctatcagaccagaacaaatgaca 114176 Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccggcacccagtagcaacatctctcct 241 |||||||| ||||| |||||||||||||||||||| ||||||| ||| ||||| ||||| Sbjct: 114177 gatgaagtctgggattatgtgttctgtgatggtccagcacccaatagtgacatccctcct 114236 Query: 242 gccctcttgagcaaaatgaagcaagagttcaagtattggtacccatttgatattcgggta 301 |||||||||||||||||||||| || || |||| ||||| |||||||||||||| || Sbjct: 114237 gccctcttgagcaaaatgaagctggaatttgagtactggtatccatttgatattcgtgtc 114296 Query: 302 tctggcaaggaccttatccagaatcatctgacattcagcatctacaatcatacagcactt 361 ||||| ||||| |||||||| || |||||||| |||||||| |||||||||||||||||| Sbjct: 114297 tctggtaaggatcttatccaaaaccatctgactttcagcatttacaatcatacagcactt 114356 Query: 362 cttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttatgctcaactct 421 ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || ||| Sbjct: 114357 cttccagagcatcattggcctcgtggtttccgctgcaatggacatcttatgcttaattct 114416 Query: 422 gagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctattgaagatttc 481 ||||||||||||||||||||||| || |||||||||||||| |||| |||||||| ||| Sbjct: 114417 gagaagatgtccaagtccacagggaatttccgaactcttcgacaggccattgaagaattc 114476 Query: 482 tcttcagatgccactaggtttgcccttgctgatgctggtgatggtatggacgatgcaaac 541 ||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 114477 tcttctgatgccactagatttgcccttgctgatgccggtgatggtatggatgatgcaaac 114536 Query: 542 tttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaatcgcttggatg 601 ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 114537 tttgtctttgaaacagcaaatgctgctattttgaggcttacaaaagaaattgcatggatg 114596 Query: 602 gaagaagttatagctgctgaatcttctctgaga 634 ||||| |||||||| |||||||||||||||||| Sbjct: 114597 gaagaggttatagccgctgaatcttctctgaga 114629
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 708 bits (357), Expect = 0.0 Identities = 564/633 (89%) Strand = Plus / Plus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| || || || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 19183066 cagtgggcctgctctcgttcttttggcctaggtactcgcattccatgggatgagcagttc 19183125 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacaccatcgctcatcat 121 || ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||| | | Sbjct: 19183126 cttgtagaatctctttctgattccaccctctacatggcatattacacaatcgctcacctt 19183185 Query: 122 ctacaaaatggtaatatgtatggacaagaaatatcttctatcaagccagaagaaatgaca 181 | |||||||| || |||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 19183186 ttgcaaaatggcaacatgtatggcaaggaaatatcttctatcagaccagaacaaatgaca 19183245 Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccggcacccagtagcaacatctctcct 241 |||||||| ||||| |||||||||||||||||||| ||||||| ||| ||||| ||||| Sbjct: 19183246 gatgaagtctgggattatgtgttctgtgatggtccagcacccaatagtgacatccctcct 19183305 Query: 242 gccctcttgagcaaaatgaagcaagagttcaagtattggtacccatttgatattcgggta 301 |||||||||||||||||||||| || || |||| ||||| |||||||||||||| || Sbjct: 19183306 gccctcttgagcaaaatgaagctggaatttgagtactggtatccatttgatattcgtgtc 19183365 Query: 302 tctggcaaggaccttatccagaatcatctgacattcagcatctacaatcatacagcactt 361 ||||| ||||| |||||||| || |||||||| |||||||| |||||||||||||||||| Sbjct: 19183366 tctggtaaggatcttatccaaaaccatctgactttcagcatttacaatcatacagcactt 19183425 Query: 362 cttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttatgctcaactct 421 ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || ||| Sbjct: 19183426 cttccagagcatcattggcctcgtggtttccgctgcaatggacatcttatgcttaattct 19183485 Query: 422 gagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctattgaagatttc 481 ||||||||||||||||||||||| || |||||||||||||| |||| |||||||| ||| Sbjct: 19183486 gagaagatgtccaagtccacagggaatttccgaactcttcgacaggccattgaagaattc 19183545 Query: 482 tcttcagatgccactaggtttgcccttgctgatgctggtgatggtatggacgatgcaaac 541 ||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 19183546 tcttctgatgccactagatttgcccttgctgatgccggtgatggtatggatgatgcaaac 19183605 Query: 542 tttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaatcgcttggatg 601 ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 19183606 tttgtctttgaaacagcaaatgctgctattttgaggcttacaaaagaaattgcatggatg 19183665 Query: 602 gaagaagttatagctgctgaatcttctctgaga 634 ||||| |||||||| |||||||||||||||||| Sbjct: 19183666 gaagaggttatagccgctgaatcttctctgaga 19183698 Score = 654 bits (330), Expect = 0.0 Identities = 552/626 (88%) Strand = Plus / Minus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| || || || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 12678941 cagtgggcttgctctcggtcttttggcctaggtactcgcattccatgggatgagcagttc 12678882 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacaccatcgctcatcat 121 || || |||||||| || ||||| ||||| || ||||| |||||||| || ||||||| | Sbjct: 12678881 ctcgtggaatctctttctgattccaccctctatatggcatattacacaattgctcatctt 12678822 Query: 122 ctacaaaatggtaatatgtatggacaagaaatatcttctatcaagccagaagaaatgaca 181 | ||||||||||| |||||||| | ||||||| |||||| | |||||| |||||||| Sbjct: 12678821 ttgcaaaatggtaacatgtatggtaaggaaatattttctattagaccagaacaaatgaca 12678762 Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccggcacccagtagcaacatctctcct 241 |||||||| ||||| ||||||||||||||||||| |||||| | || |||| |||| Sbjct: 12678761 gatgaagtttgggactatgtgttctgtgatggtctggcacctactactgacatacctcca 12678702 Query: 242 gccctcttgagcaaaatgaagcaagagttcaagtattggtacccatttgatattcgggta 301 || |||||||| |||||||||||||| ||| |||||||||| || |||||||||||||| Sbjct: 12678701 gctctcttgagtaaaatgaagcaagaattcgagtattggtatccctttgatattcgggtg 12678642 Query: 302 tctggcaaggaccttatccagaatcatctgacattcagcatctacaatcatacagcactt 361 ||||||||||| |||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 12678641 tctggcaaggatcttatccaaaaccatctgacattcagcatttacaaccatacagcactt 12678582 Query: 362 cttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttatgctcaactct 421 ||||| |||||||||||||| ||||| || ||||||||||||||||||||||| || ||| Sbjct: 12678581 cttccggagcatcattggccccgtggcttccgttgcaatgggcatcttatgcttaattct 12678522 Query: 422 gagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctattgaagatttc 481 ||||||||||||||||||||||| || ||||| ||||||||| |||| |||||||| ||| Sbjct: 12678521 gagaagatgtccaagtccacagggaatttccgtactcttcggcaggccattgaagaattc 12678462 Query: 482 tcttcagatgccactaggtttgcccttgctgatgctggtgatggtatggacgatgcaaac 541 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 12678461 tcttctgatgccactaggtttgcccttgctgatgctggtgatggtatggatgatgccaat 12678402 Query: 542 tttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaatcgcttggatg 601 ||||| |||||||| ||||||||||||||||||||||| || || ||||| || |||||| Sbjct: 12678401 tttgtctttgaaacagcaaatgctgctattttgaggcttaccaaagaaattgcatggatg 12678342 Query: 602 gaagaagttatagctgctgaatcttc 627 ||||| |||||||||||||||||||| Sbjct: 12678341 gaagaggttatagctgctgaatcttc 12678316
>dbj|AK099796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097H06, full insert sequence Length = 3673 Score = 708 bits (357), Expect = 0.0 Identities = 564/633 (89%) Strand = Plus / Plus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| || || || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1871 cagtgggcctgctctcgttcttttggcctaggtactcgcattccatgggatgagcagttc 1930 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacaccatcgctcatcat 121 || ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||| | | Sbjct: 1931 cttgtagaatctctttctgattccaccctctacatggcatattacacaatcgctcacctt 1990 Query: 122 ctacaaaatggtaatatgtatggacaagaaatatcttctatcaagccagaagaaatgaca 181 | |||||||| || |||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1991 ttgcaaaatggcaacatgtatggcaaggaaatatcttctatcagaccagaacaaatgaca 2050 Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccggcacccagtagcaacatctctcct 241 |||||||| ||||| |||||||||||||||||||| ||||||| ||| ||||| ||||| Sbjct: 2051 gatgaagtctgggattatgtgttctgtgatggtccagcacccaatagtgacatccctcct 2110 Query: 242 gccctcttgagcaaaatgaagcaagagttcaagtattggtacccatttgatattcgggta 301 |||||||||||||||||||||| || || |||| ||||| |||||||||||||| || Sbjct: 2111 gccctcttgagcaaaatgaagctggaatttgagtactggtatccatttgatattcgtgtc 2170 Query: 302 tctggcaaggaccttatccagaatcatctgacattcagcatctacaatcatacagcactt 361 ||||| ||||| |||||||| || |||||||| |||||||| |||||||||||||||||| Sbjct: 2171 tctggtaaggatcttatccaaaaccatctgactttcagcatttacaatcatacagcactt 2230 Query: 362 cttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttatgctcaactct 421 ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || ||| Sbjct: 2231 cttccagagcatcattggcctcgtggtttccgctgcaatggacatcttatgcttaattct 2290 Query: 422 gagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctattgaagatttc 481 ||||||||||||||||||||||| || |||||||||||||| |||| |||||||| ||| Sbjct: 2291 gagaagatgtccaagtccacagggaatttccgaactcttcgacaggccattgaagaattc 2350 Query: 482 tcttcagatgccactaggtttgcccttgctgatgctggtgatggtatggacgatgcaaac 541 ||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 2351 tcttctgatgccactagatttgcccttgctgatgccggtgatggtatggatgatgcaaac 2410 Query: 542 tttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaatcgcttggatg 601 ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 2411 tttgtctttgaaacagcaaatgctgctattttgaggcttacaaaagaaattgcatggatg 2470 Query: 602 gaagaagttatagctgctgaatcttctctgaga 634 ||||| |||||||| |||||||||||||||||| Sbjct: 2471 gaagaggttatagccgctgaatcttctctgaga 2503
>dbj|AK100624.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108I24, full insert sequence Length = 3669 Score = 708 bits (357), Expect = 0.0 Identities = 564/633 (89%) Strand = Plus / Plus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| || || || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1871 cagtgggcctgctctcgttcttttggcctaggtactcgcattccatgggatgagcagttc 1930 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacaccatcgctcatcat 121 || ||||||||||| || ||||| ||||| |||||||| |||||||| |||||||| | | Sbjct: 1931 cttgtagaatctctttctgattccaccctctacatggcatattacacaatcgctcacctt 1990 Query: 122 ctacaaaatggtaatatgtatggacaagaaatatcttctatcaagccagaagaaatgaca 181 | |||||||| || |||||||| | |||||||||||||||| |||||| |||||||| Sbjct: 1991 ttgcaaaatggcaacatgtatggcaaggaaatatcttctatcagaccagaacaaatgaca 2050 Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccggcacccagtagcaacatctctcct 241 |||||||| ||||| |||||||||||||||||||| ||||||| ||| ||||| ||||| Sbjct: 2051 gatgaagtctgggattatgtgttctgtgatggtccagcacccaatagtgacatccctcct 2110 Query: 242 gccctcttgagcaaaatgaagcaagagttcaagtattggtacccatttgatattcgggta 301 |||||||||||||||||||||| || || |||| ||||| |||||||||||||| || Sbjct: 2111 gccctcttgagcaaaatgaagctggaatttgagtactggtatccatttgatattcgtgtc 2170 Query: 302 tctggcaaggaccttatccagaatcatctgacattcagcatctacaatcatacagcactt 361 ||||| ||||| |||||||| || |||||||| |||||||| |||||||||||||||||| Sbjct: 2171 tctggtaaggatcttatccaaaaccatctgactttcagcatttacaatcatacagcactt 2230 Query: 362 cttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttatgctcaactct 421 ||||||||||||||||||||||||||||| || |||||||| ||||||||||| || ||| Sbjct: 2231 cttccagagcatcattggcctcgtggtttccgctgcaatggacatcttatgcttaattct 2290 Query: 422 gagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctattgaagatttc 481 ||||||||||||||||||||||| || |||||||||||||| |||| |||||||| ||| Sbjct: 2291 gagaagatgtccaagtccacagggaatttccgaactcttcgacaggccattgaagaattc 2350 Query: 482 tcttcagatgccactaggtttgcccttgctgatgctggtgatggtatggacgatgcaaac 541 ||||| ||||||||||| ||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 2351 tcttctgatgccactagatttgcccttgctgatgccggtgatggtatggatgatgcaaac 2410 Query: 542 tttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaatcgcttggatg 601 ||||| |||||||| ||||||||||||||||||||||| ||||| ||||| || |||||| Sbjct: 2411 tttgtctttgaaacagcaaatgctgctattttgaggcttacaaaagaaattgcatggatg 2470 Query: 602 gaagaagttatagctgctgaatcttctctgaga 634 ||||| |||||||| |||||||||||||||||| Sbjct: 2471 gaagaggttatagccgctgaatcttctctgaga 2503
>ref|XM_450769.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3772 Score = 654 bits (330), Expect = 0.0 Identities = 552/626 (88%) Strand = Plus / Plus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| || || || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1859 cagtgggcttgctctcggtcttttggcctaggtactcgcattccatgggatgagcagttc 1918 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacaccatcgctcatcat 121 || || |||||||| || ||||| ||||| || ||||| |||||||| || ||||||| | Sbjct: 1919 ctcgtggaatctctttctgattccaccctctatatggcatattacacaattgctcatctt 1978 Query: 122 ctacaaaatggtaatatgtatggacaagaaatatcttctatcaagccagaagaaatgaca 181 | ||||||||||| |||||||| | ||||||| |||||| | |||||| |||||||| Sbjct: 1979 ttgcaaaatggtaacatgtatggtaaggaaatattttctattagaccagaacaaatgaca 2038 Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccggcacccagtagcaacatctctcct 241 |||||||| ||||| ||||||||||||||||||| |||||| | || |||| |||| Sbjct: 2039 gatgaagtttgggactatgtgttctgtgatggtctggcacctactactgacatacctcca 2098 Query: 242 gccctcttgagcaaaatgaagcaagagttcaagtattggtacccatttgatattcgggta 301 || |||||||| |||||||||||||| ||| |||||||||| || |||||||||||||| Sbjct: 2099 gctctcttgagtaaaatgaagcaagaattcgagtattggtatccctttgatattcgggtg 2158 Query: 302 tctggcaaggaccttatccagaatcatctgacattcagcatctacaatcatacagcactt 361 ||||||||||| |||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 2159 tctggcaaggatcttatccaaaaccatctgacattcagcatttacaaccatacagcactt 2218 Query: 362 cttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttatgctcaactct 421 ||||| |||||||||||||| ||||| || ||||||||||||||||||||||| || ||| Sbjct: 2219 cttccggagcatcattggccccgtggcttccgttgcaatgggcatcttatgcttaattct 2278 Query: 422 gagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctattgaagatttc 481 ||||||||||||||||||||||| || ||||| ||||||||| |||| |||||||| ||| Sbjct: 2279 gagaagatgtccaagtccacagggaatttccgtactcttcggcaggccattgaagaattc 2338 Query: 482 tcttcagatgccactaggtttgcccttgctgatgctggtgatggtatggacgatgcaaac 541 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 2339 tcttctgatgccactaggtttgcccttgctgatgctggtgatggtatggatgatgccaat 2398 Query: 542 tttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaatcgcttggatg 601 ||||| |||||||| ||||||||||||||||||||||| || || ||||| || |||||| Sbjct: 2399 tttgtctttgaaacagcaaatgctgctattttgaggcttaccaaagaaattgcatggatg 2458 Query: 602 gaagaagttatagctgctgaatcttc 627 ||||| |||||||||||||||||||| Sbjct: 2459 gaagaggttatagctgctgaatcttc 2484
>dbj|AP005838.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0041C07 Length = 179047 Score = 654 bits (330), Expect = 0.0 Identities = 552/626 (88%) Strand = Plus / Minus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| || || || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 144879 cagtgggcttgctctcggtcttttggcctaggtactcgcattccatgggatgagcagttc 144820 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacaccatcgctcatcat 121 || || |||||||| || ||||| ||||| || ||||| |||||||| || ||||||| | Sbjct: 144819 ctcgtggaatctctttctgattccaccctctatatggcatattacacaattgctcatctt 144760 Query: 122 ctacaaaatggtaatatgtatggacaagaaatatcttctatcaagccagaagaaatgaca 181 | ||||||||||| |||||||| | ||||||| |||||| | |||||| |||||||| Sbjct: 144759 ttgcaaaatggtaacatgtatggtaaggaaatattttctattagaccagaacaaatgaca 144700 Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccggcacccagtagcaacatctctcct 241 |||||||| ||||| ||||||||||||||||||| |||||| | || |||| |||| Sbjct: 144699 gatgaagtttgggactatgtgttctgtgatggtctggcacctactactgacatacctcca 144640 Query: 242 gccctcttgagcaaaatgaagcaagagttcaagtattggtacccatttgatattcgggta 301 || |||||||| |||||||||||||| ||| |||||||||| || |||||||||||||| Sbjct: 144639 gctctcttgagtaaaatgaagcaagaattcgagtattggtatccctttgatattcgggtg 144580 Query: 302 tctggcaaggaccttatccagaatcatctgacattcagcatctacaatcatacagcactt 361 ||||||||||| |||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 144579 tctggcaaggatcttatccaaaaccatctgacattcagcatttacaaccatacagcactt 144520 Query: 362 cttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttatgctcaactct 421 ||||| |||||||||||||| ||||| || ||||||||||||||||||||||| || ||| Sbjct: 144519 cttccggagcatcattggccccgtggcttccgttgcaatgggcatcttatgcttaattct 144460 Query: 422 gagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctattgaagatttc 481 ||||||||||||||||||||||| || ||||| ||||||||| |||| |||||||| ||| Sbjct: 144459 gagaagatgtccaagtccacagggaatttccgtactcttcggcaggccattgaagaattc 144400 Query: 482 tcttcagatgccactaggtttgcccttgctgatgctggtgatggtatggacgatgcaaac 541 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 144399 tcttctgatgccactaggtttgcccttgctgatgctggtgatggtatggatgatgccaat 144340 Query: 542 tttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaatcgcttggatg 601 ||||| |||||||| ||||||||||||||||||||||| || || ||||| || |||||| Sbjct: 144339 tttgtctttgaaacagcaaatgctgctattttgaggcttaccaaagaaattgcatggatg 144280 Query: 602 gaagaagttatagctgctgaatcttc 627 ||||| |||||||||||||||||||| Sbjct: 144279 gaagaggttatagctgctgaatcttc 144254
>dbj|AK068860.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D12, full insert sequence Length = 3772 Score = 654 bits (330), Expect = 0.0 Identities = 552/626 (88%) Strand = Plus / Plus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| || || || ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1859 cagtgggcttgctctcggtcttttggcctaggtactcgcattccatgggatgagcagttc 1918 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacaccatcgctcatcat 121 || || |||||||| || ||||| ||||| || ||||| |||||||| || ||||||| | Sbjct: 1919 ctcgtggaatctctttctgattccaccctctatatggcatattacacaattgctcatctt 1978 Query: 122 ctacaaaatggtaatatgtatggacaagaaatatcttctatcaagccagaagaaatgaca 181 | ||||||||||| |||||||| | ||||||| |||||| | |||||| |||||||| Sbjct: 1979 ttgcaaaatggtaacatgtatggtaaggaaatattttctattagaccagaacaaatgaca 2038 Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccggcacccagtagcaacatctctcct 241 |||||||| ||||| ||||||||||||||||||| |||||| | || |||| |||| Sbjct: 2039 gatgaagtttgggactatgtgttctgtgatggtctggcacctactactgacatacctcca 2098 Query: 242 gccctcttgagcaaaatgaagcaagagttcaagtattggtacccatttgatattcgggta 301 || |||||||| |||||||||||||| ||| |||||||||| || |||||||||||||| Sbjct: 2099 gctctcttgagtaaaatgaagcaagaattcgagtattggtatccctttgatattcgggtg 2158 Query: 302 tctggcaaggaccttatccagaatcatctgacattcagcatctacaatcatacagcactt 361 ||||||||||| |||||||| || ||||||||||||||||| ||||| |||||||||||| Sbjct: 2159 tctggcaaggatcttatccaaaaccatctgacattcagcatttacaaccatacagcactt 2218 Query: 362 cttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttatgctcaactct 421 ||||| |||||||||||||| ||||| || ||||||||||||||||||||||| || ||| Sbjct: 2219 cttccggagcatcattggccccgtggcttccgttgcaatgggcatcttatgcttaattct 2278 Query: 422 gagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctattgaagatttc 481 ||||||||||||||||||||||| || ||||| ||||||||| |||| |||||||| ||| Sbjct: 2279 gagaagatgtccaagtccacagggaatttccgtactcttcggcaggccattgaagaattc 2338 Query: 482 tcttcagatgccactaggtttgcccttgctgatgctggtgatggtatggacgatgcaaac 541 ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct: 2339 tcttctgatgccactaggtttgcccttgctgatgctggtgatggtatggatgatgccaat 2398 Query: 542 tttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaatcgcttggatg 601 ||||| |||||||| ||||||||||||||||||||||| || || ||||| || |||||| Sbjct: 2399 tttgtctttgaaacagcaaatgctgctattttgaggcttaccaaagaaattgcatggatg 2458 Query: 602 gaagaagttatagctgctgaatcttc 627 ||||| |||||||||||||||||||| Sbjct: 2459 gaagaggttatagctgctgaatcttc 2484
>gb|AY107623.1| Zea mays PCO144466 mRNA sequence Length = 2543 Score = 404 bits (204), Expect = e-109 Identities = 519/624 (83%) Strand = Plus / Plus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| |||||||| || ||||| || ||||| || ||||||||||||||||||||| Sbjct: 748 cagtgggcttgttcacgttcatttggactcggtactcgaattccatgggatgagcagttc 807 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacaccatcgctcatcat 121 || ||||||||||| || ||||| || || |||||||||||||| || | || || | | Sbjct: 808 cttgtagaatctctttctgattctactctatacatggcttattatacagttgcacacctt 867 Query: 122 ctacaaaatggtaatatgtatggacaagaaatatcttctatcaagccagaagaaatgaca 181 | |||||||||||||||||||| ||||||||||||| | | |||||||||||||||| Sbjct: 868 ttgcaaaatggtaatatgtatgggaaagaaatatcttcagtaaggccagaagaaatgaca 927 Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccggcacccagtagcaacatctctcct 241 |||||||| ||||| | ||||| |||||||| |||||||| | ||| | ||| || | Sbjct: 928 gatgaagtctgggatttcgtgttttgtgatggcccggcaccaaaaagcgagatccctgcc 987 Query: 242 gccctcttgagcaaaatgaagcaagagttcaagtattggtacccatttgatattcgggta 301 || || |||| ||| ||||| || || || ||||||||||| ||||||||||| || || Sbjct: 988 gctctgttgaacaagatgaaacaggaatttaagtattggtatccatttgatatccgtgtg 1047 Query: 302 tctggcaaggaccttatccagaatcatctgacattcagcatctacaatcatacagcactt 361 ||||| || |||||||| || || ||| |||||||| |||| |||||||||||||||||| Sbjct: 1048 tctggtaaagaccttattcaaaaccatttgacattctgcatatacaatcatacagcactt 1107 Query: 362 cttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttatgctcaactct 421 ||||| ||||| || |||||| |||||| || |||||||||||||| ||||| |||||| Sbjct: 1108 cttcctgagcaccactggcctattggtttccgctgcaatgggcatctaatgcttaactct 1167 Query: 422 gagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctattgaagatttc 481 ||||| ||||||||||||||||| || |||| |||||| || || || || | | | Sbjct: 1168 gagaaaatgtccaagtccacagggaatttcctaactctggaagatgccataaaaaagtac 1227 Query: 482 tcttcagatgccactaggtttgcccttgctgatgctggtgatggtatggacgatgcaaac 541 ||||| ||||||||||| |||||||||||||||||||| ||||||||||| |||||||| Sbjct: 1228 tcttctgatgccactagatttgcccttgctgatgctggcgatggtatggatgatgcaaat 1287 Query: 542 tttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaatcgcttggatg 601 ||||| ||||||||||||| ||||| || ||||||| ||||| ||||| | |||||| Sbjct: 1288 tttgtcactgaaactgcaaattctgctgttatgaggcttacaaaagaaatttcatggatg 1347 Query: 602 gaagaagttatagctgctgaatct 625 || || |||| ||||||||||||| Sbjct: 1348 gaggaggttacagctgctgaatct 1371
>dbj|AK062108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-B04, full insert sequence Length = 1434 Score = 379 bits (191), Expect = e-102 Identities = 260/283 (91%) Strand = Plus / Plus Query: 352 tacagcacttcttccagagcatcattggcctcgtggttttcgttgcaatgggcatcttat 411 ||||||||||||||||||||||||||||||||||||||| || |||||||| |||||||| Sbjct: 1 tacagcacttcttccagagcatcattggcctcgtggtttccgctgcaatggacatcttat 60 Query: 412 gctcaactctgagaagatgtccaagtccacaggtaacttccgaactcttcgggaggctat 471 ||| || |||||||||||||||||||||||||| || |||||||||||||| |||| || Sbjct: 61 gcttaattctgagaagatgtccaagtccacagggaatttccgaactcttcgacaggccat 120 Query: 472 tgaagatttctcttcagatgccactaggtttgcccttgctgatgctggtgatggtatgga 531 |||||| |||||||| ||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 121 tgaagaattctcttctgatgccactagatttgcccttgctgatgccggtgatggtatgga 180 Query: 532 cgatgcaaactttgtttttgaaactgcaaatgctgctattttgaggctcacaaaggaaat 591 |||||||||||||| |||||||| ||||||||||||||||||||||| ||||| ||||| Sbjct: 181 tgatgcaaactttgtctttgaaacagcaaatgctgctattttgaggcttacaaaagaaat 240 Query: 592 cgcttggatggaagaagttatagctgctgaatcttctctgaga 634 || ||||||||||| |||||||| |||||||||||||||||| Sbjct: 241 tgcatggatggaagaggttatagccgctgaatcttctctgaga 283
>gb|AC105259.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B04, complete sequence Length = 95383 Score = 165 bits (83), Expect = 2e-37 Identities = 257/315 (81%) Strand = Plus / Plus Query: 254 aaaatgaagcaagagttcaagtattggtacccatttgatattcgggtatctggcaaggac 313 ||||||||||||||||| |||| ||||| || || ||| |||| | || || |||||| Sbjct: 73302 aaaatgaagcaagagtttgagtactggtatcccttcgatcttcgaatttcaggtaaggac 73361 Query: 314 cttatccagaatcatctgacattcagcatctacaatcatacagcacttcttccagagcat 373 ||||| ||||| |||||| | ||| | |||| |||||| ||| ||||||||||| | ||| Sbjct: 73362 cttatgcagaaccatctggccttctgtatcttcaatcacacaacacttcttccaaaacat 73421 Query: 374 cattggcctcgtggttttcgttgcaatgggcatcttatgctcaactctgagaagatgtcc 433 |||||||| || || || |||||||| | || ||| |||| || |||||||||||||| Sbjct: 73422 cattggccccgcggattccgttgcaacagacaccttctgcttaattctgagaagatgtct 73481 Query: 434 aagtccacaggtaacttccgaactcttcgggaggctattgaagatttctcttcagatgcc 493 ||||||||||| || ||| | || ||||| |||| || || || || || || |||||| Sbjct: 73482 aagtccacaggaaatttcaggacccttcgacaggccatagaggaattttcgtctgatgcc 73541 Query: 494 actaggtttgcccttgctgatgctggtgatggtatggacgatgcaaactttgtttttgaa 553 ||||||||||| |||||||||| |||||| |||||||| |||| ||||||||| | ||| Sbjct: 73542 actaggtttgcacttgctgatgttggtgacggtatggatgatgaaaactttgtctctgag 73601 Query: 554 actgcaaatgctgct 568 ||||||||| ||||| Sbjct: 73602 actgcaaattctgct 73616 Score = 133 bits (67), Expect = 8e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 20 tcttttggcctaggtacccgcattccatgggatgagcagttcctggtagaatctctctca 79 |||||||| |||||||| || ||||||||||||||| |||| || ||||| ||||| || Sbjct: 73068 tcttttggactaggtactcggattccatgggatgagaagtttcttgtagattctctttct 73127 Query: 80 gattcaaccctgtacatggcttattacaccatcgctcatcatctacaaaatggtaatatg 139 |||||||| |||||||||| || |||||||| || ||| || ||||||||||| || Sbjct: 73128 gattcaactttgtacatggcctactacaccattgcacatatactgcaaaatggtaacatt 73187 Query: 140 tatggacaagaaatatcttctatcaagccagaagaaatgacagatgaagtatgggaatat 199 |||||| || | |||| ||| | ||||||| ||||||| |||||||||||||| ||| Sbjct: 73188 tatggatctgacaactcttatataaggccagaacaaatgactgatgaagtatgggattat 73247 Query: 200 gtgttctgtgatggtccggcacc 222 ||||||||| ||||||||||||| Sbjct: 73248 gtgttctgtaatggtccggcacc 73270
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 2e-37 Identities = 257/315 (81%) Strand = Plus / Plus Query: 254 aaaatgaagcaagagttcaagtattggtacccatttgatattcgggtatctggcaaggac 313 ||||||||||||||||| |||| ||||| || || ||| |||| | || || |||||| Sbjct: 8495032 aaaatgaagcaagagtttgagtactggtatcccttcgatcttcgaatttcaggtaaggac 8495091 Query: 314 cttatccagaatcatctgacattcagcatctacaatcatacagcacttcttccagagcat 373 ||||| ||||| |||||| | ||| | |||| |||||| ||| ||||||||||| | ||| Sbjct: 8495092 cttatgcagaaccatctggccttctgtatcttcaatcacacaacacttcttccaaaacat 8495151 Query: 374 cattggcctcgtggttttcgttgcaatgggcatcttatgctcaactctgagaagatgtcc 433 |||||||| || || || |||||||| | || ||| |||| || |||||||||||||| Sbjct: 8495152 cattggccccgcggattccgttgcaacagacaccttctgcttaattctgagaagatgtct 8495211 Query: 434 aagtccacaggtaacttccgaactcttcgggaggctattgaagatttctcttcagatgcc 493 ||||||||||| || ||| | || ||||| |||| || || || || || || |||||| Sbjct: 8495212 aagtccacaggaaatttcaggacccttcgacaggccatagaggaattttcgtctgatgcc 8495271 Query: 494 actaggtttgcccttgctgatgctggtgatggtatggacgatgcaaactttgtttttgaa 553 ||||||||||| |||||||||| |||||| |||||||| |||| ||||||||| | ||| Sbjct: 8495272 actaggtttgcacttgctgatgttggtgacggtatggatgatgaaaactttgtctctgag 8495331 Query: 554 actgcaaatgctgct 568 ||||||||| ||||| Sbjct: 8495332 actgcaaattctgct 8495346 Score = 133 bits (67), Expect = 8e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 20 tcttttggcctaggtacccgcattccatgggatgagcagttcctggtagaatctctctca 79 |||||||| |||||||| || ||||||||||||||| |||| || ||||| ||||| || Sbjct: 8494798 tcttttggactaggtactcggattccatgggatgagaagtttcttgtagattctctttct 8494857 Query: 80 gattcaaccctgtacatggcttattacaccatcgctcatcatctacaaaatggtaatatg 139 |||||||| |||||||||| || |||||||| || ||| || ||||||||||| || Sbjct: 8494858 gattcaactttgtacatggcctactacaccattgcacatatactgcaaaatggtaacatt 8494917 Query: 140 tatggacaagaaatatcttctatcaagccagaagaaatgacagatgaagtatgggaatat 199 |||||| || | |||| ||| | ||||||| ||||||| |||||||||||||| ||| Sbjct: 8494918 tatggatctgacaactcttatataaggccagaacaaatgactgatgaagtatgggattat 8494977 Query: 200 gtgttctgtgatggtccggcacc 222 ||||||||| ||||||||||||| Sbjct: 8494978 gtgttctgtaatggtccggcacc 8495000
>dbj|AK120403.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013088K21, full insert sequence Length = 5000 Score = 165 bits (83), Expect = 2e-37 Identities = 257/315 (81%) Strand = Plus / Plus Query: 254 aaaatgaagcaagagttcaagtattggtacccatttgatattcgggtatctggcaaggac 313 ||||||||||||||||| |||| ||||| || || ||| |||| | || || |||||| Sbjct: 3380 aaaatgaagcaagagtttgagtactggtatcccttcgatcttcgaatttcaggtaaggac 3439 Query: 314 cttatccagaatcatctgacattcagcatctacaatcatacagcacttcttccagagcat 373 ||||| ||||| |||||| | ||| | |||| |||||| ||| ||||||||||| | ||| Sbjct: 3440 cttatgcagaaccatctggccttctgtatcttcaatcacacaacacttcttccaaaacat 3499 Query: 374 cattggcctcgtggttttcgttgcaatgggcatcttatgctcaactctgagaagatgtcc 433 |||||||| || || || |||||||| | || ||| |||| || |||||||||||||| Sbjct: 3500 cattggccccgcggattccgttgcaacagacaccttctgcttaattctgagaagatgtct 3559 Query: 434 aagtccacaggtaacttccgaactcttcgggaggctattgaagatttctcttcagatgcc 493 ||||||||||| || ||| | || ||||| |||| || || || || || || |||||| Sbjct: 3560 aagtccacaggaaatttcaggacccttcgacaggccatagaggaattttcgtctgatgcc 3619 Query: 494 actaggtttgcccttgctgatgctggtgatggtatggacgatgcaaactttgtttttgaa 553 ||||||||||| |||||||||| |||||| |||||||| |||| ||||||||| | ||| Sbjct: 3620 actaggtttgcacttgctgatgttggtgacggtatggatgatgaaaactttgtctctgag 3679 Query: 554 actgcaaatgctgct 568 ||||||||| ||||| Sbjct: 3680 actgcaaattctgct 3694 Score = 133 bits (67), Expect = 8e-28 Identities = 169/203 (83%) Strand = Plus / Plus Query: 20 tcttttggcctaggtacccgcattccatgggatgagcagttcctggtagaatctctctca 79 |||||||| |||||||| || ||||||||||||||| |||| || ||||| ||||| || Sbjct: 3146 tcttttggactaggtactcggattccatgggatgagaagtttcttgtagattctctttct 3205 Query: 80 gattcaaccctgtacatggcttattacaccatcgctcatcatctacaaaatggtaatatg 139 |||||||| |||||||||| || |||||||| || ||| || ||||||||||| || Sbjct: 3206 gattcaactttgtacatggcctactacaccattgcacatatactgcaaaatggtaacatt 3265 Query: 140 tatggacaagaaatatcttctatcaagccagaagaaatgacagatgaagtatgggaatat 199 |||||| || | |||| ||| | ||||||| ||||||| |||||||||||||| ||| Sbjct: 3266 tatggatctgacaactcttatataaggccagaacaaatgactgatgaagtatgggattat 3325 Query: 200 gtgttctgtgatggtccggcacc 222 ||||||||| ||||||||||||| Sbjct: 3326 gtgttctgtaatggtccggcacc 3348
>gb|AF061510.1|AF061510 Zea mays putative leucyl-tRNA synthetase mRNA, partial cds Length = 302 Score = 103 bits (52), Expect = 7e-19 Identities = 91/104 (87%) Strand = Plus / Plus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| |||||||| || ||||| || ||||| || ||||||||||||||||||||| Sbjct: 145 cagtgggcgtgttcacgttcatttggactcggtactcgaattccatgggatgagcagttc 204 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttatta 105 || || |||||||| || ||||| ||||| |||||||||||||| Sbjct: 205 cttgtggaatctctttctgattctaccctatacatggcttatta 248
>gb|AC015445.3|F2J10 Sequence of BAC F2J10 from Arabidopsis thaliana chromosome 1, complete sequence Length = 91720 Score = 95.6 bits (48), Expect = 2e-16 Identities = 141/172 (81%) Strand = Plus / Minus Query: 408 ttatgctcaactctgagaagatgtccaagtccacaggtaacttccgaactcttcgggagg 467 |||||||||| |||||||| ||||| ||||| || || || ||| |||| || || ||| Sbjct: 7780 ttatgctcaattctgagaaaatgtcaaagtcaactggaaatttcagaaccctgcgccagg 7721 Query: 468 ctattgaagatttctcttcagatgccactaggtttgcccttgctgatgctggtgatggta 527 |||| ||||| |||||| | ||| || |||||| | | ||||||||||||||||| Sbjct: 7720 ctatcgaagaattctctgccactgctacaaggttttctttggctgatgctggtgatggcg 7661 Query: 528 tggacgatgcaaactttgtttttgaaactgcaaatgctgctattttgaggct 579 | ||||||||||| ||||| |||||||||||||||||||| |||||| |||| Sbjct: 7660 ttgacgatgcaaattttgtatttgaaactgcaaatgctgcaattttgcggct 7609 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 182 gatgaagtatgggaatatgtgttctgtgatggtccg 217 |||||||| ||||| ||| | ||||||||||||||| Sbjct: 8008 gatgaagtttgggagtatctcttctgtgatggtccg 7973
>ref|NM_100834.3| Arabidopsis thaliana ATP binding / leucine-tRNA ligase/ tRNA ligase AT1G09620 mRNA, complete cds Length = 4269 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 509 gctgatgctggtgatggtatggacgatgcaaactttgtttttgaaactgcaaatgctgct 568 |||||||||||||||||| | || |||||||| |||| |||||||||||||||||||| Sbjct: 2371 gctgatgctggtgatggtgttgatgatgcaaattttgcatttgaaactgcaaatgctgca 2430 Query: 569 attttgaggctcacaaaggaaatcgcttggatggaagaagtt 610 |||||| || | ||||| || || | ||||||||||||||| Sbjct: 2431 attttgcggttgacaaaagagctcacatggatggaagaagtt 2472
>gb|AC003970.1| Arabidopsis thaliana chromosome I BAC F14J9 genomic sequence contains phyA marker, complete sequence Length = 95865 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 509 gctgatgctggtgatggtatggacgatgcaaactttgtttttgaaactgcaaatgctgct 568 |||||||||||||||||| | || |||||||| |||| |||||||||||||||||||| Sbjct: 95832 gctgatgctggtgatggtgttgatgatgcaaattttgcatttgaaactgcaaatgctgca 95773 Query: 569 attttgaggctcacaaaggaaatcgcttggatggaagaagtt 610 |||||| || | ||||| || || | ||||||||||||||| Sbjct: 95772 attttgcggttgacaaaagagctcacatggatggaagaagtt 95731
>gb|AY056261.1| Arabidopsis thaliana At1g09620 mRNA sequence Length = 3645 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 509 gctgatgctggtgatggtatggacgatgcaaactttgtttttgaaactgcaaatgctgct 568 |||||||||||||||||| | || |||||||| |||| |||||||||||||||||||| Sbjct: 2357 gctgatgctggtgatggtgttgatgatgcaaattttgcatttgaaactgcaaatgctgca 2416 Query: 569 attttgaggctcacaaaggaaatcgcttggatggaagaagtt 610 |||||| || | ||||| || || | ||||||||||||||| Sbjct: 2417 attttgcggttgacaaaagagctcacatggatggaagaagtt 2458
>dbj|AK222125.1| Arabidopsis thaliana mRNA for putative leucyl-tRNA synthetase, complete cds, clone: RAFL22-94-F12 Length = 2068 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Plus Query: 509 gctgatgctggtgatggtatggacgatgcaaactttgtttttgaaactgcaaatgctgct 568 |||||||||||||||||| | || |||||||| |||| |||||||||||||||||||| Sbjct: 820 gctgatgctggtgatggtgttgatgatgcaaattttgcatttgaaactgcaaatgctgca 879 Query: 569 attttgaggctcacaaaggaaatcgcttggatggaagaagtt 610 |||||| || | ||||| || || | ||||||||||||||| Sbjct: 880 attttgcggttgacaaaagagctcacatggatggaagaagtt 921
>gb|AC000132.1|F21M12 Sequence of BAC F21M12 from Arabidopsis thaliana chromosome 1, complete sequence Length = 146505 Score = 83.8 bits (42), Expect = 6e-13 Identities = 87/102 (85%) Strand = Plus / Minus Query: 509 gctgatgctggtgatggtatggacgatgcaaactttgtttttgaaactgcaaatgctgct 568 |||||||||||||||||| | || |||||||| |||| |||||||||||||||||||| Sbjct: 1115 gctgatgctggtgatggtgttgatgatgcaaattttgcatttgaaactgcaaatgctgca 1056 Query: 569 attttgaggctcacaaaggaaatcgcttggatggaagaagtt 610 |||||| || | ||||| || || | ||||||||||||||| Sbjct: 1055 attttgcggttgacaaaagagctcacatggatggaagaagtt 1014
>ref|XM_535229.2| PREDICTED: Canis familiaris similar to Leucyl-tRNA synthetase, cytoplasmic (Leucine--tRNA ligase) (LeuRS) (LOC478051), mRNA Length = 3726 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 413 ctcaactctgagaagatgtccaagtccacaggtaacttcc 452 |||||||||||||||||||| ||||||||||| ||||||| Sbjct: 2134 ctcaactctgagaagatgtcaaagtccacaggcaacttcc 2173
>ref|XM_693187.1| PREDICTED: Danio rerio similar to MGC97760 protein (LOC569778), mRNA Length = 2888 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 397 caatgggcatcttatgctcaactctgagaagatgtccaagtccacaggtaactt 450 |||||| |||||| |||| |||||||| ||||||||||| ||||| || ||||| Sbjct: 756 caatggtcatcttttgctaaactctgaaaagatgtccaaatccactggcaactt 809
>ref|XM_518016.1| PREDICTED: Pan troglodytes similar to leucyl-tRNA synthetase (LOC462167), mRNA Length = 3718 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 2068 aactctgagaagatgtcaaaatccacaggcaacttcc 2104
>dbj|AK095870.1| Homo sapiens cDNA FLJ38551 fis, clone HCHON2002194, weakly similar to Homo sapiens mRNA for leucyl tRNA synthetase Length = 2400 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 2156 aactctgagaagatgtcaaaatccacaggcaacttcc 2192
>dbj|AK023777.1| Homo sapiens cDNA FLJ13715 fis, clone PLACE2000404, moderately similar to PROBABLE LEUCYL-TRNA SYNTHETASE (EC 6.1.1.4) Length = 3003 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 1415 aactctgagaagatgtcaaaatccacaggcaacttcc 1451
>dbj|AK001457.1| Homo sapiens cDNA FLJ10595 fis, clone NT2RP2004791, moderately similar to PUTATIVE LEUCYL-TRNA SYNTHETASE, CYTOPLASMIC (EC 6.1.1.4) Length = 2652 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 191 aactctgagaagatgtcaaaatccacaggcaacttcc 227
>ref|NM_020117.8| Homo sapiens leucyl-tRNA synthetase (LARS), mRNA Length = 4248 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 2209 aactctgagaagatgtcaaaatccacaggcaacttcc 2245
>dbj|AK025441.1| Homo sapiens cDNA: FLJ21788 fis, clone HEP00343 Length = 3881 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 2267 aactctgagaagatgtcaaaatccacaggcaacttcc 2303
>dbj|AK000277.1| Homo sapiens cDNA FLJ20270 fis, clone HEP01332, highly similar to SYLC_CAEEL PROBABLE LEUCYL-TRNA SYNTHETASE Length = 2262 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 655 aactctgagaagatgtcaaaatccacaggcaacttcc 691
>gb|AY513284.1| Homo sapiens proliferation-inducing protein 44 (PIG44) mRNA, complete cds Length = 1721 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 118 aactctgagaagatgtcaaaatccacaggcaacttcc 154
>gb|U56252.1|HSU56252 Human HeLa mRNA isolated as a false positive in a two-hybrid-screen Length = 456 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 294 aactctgagaagatgtcaaaatccacagggaacttcc 330
>dbj|D84223.1| Homo sapiens mRNA for leucyl tRNA synthetase, complete cds Length = 4248 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 2209 aactctgagaagatgtcaaaatccacaggcaacttcc 2245
>dbj|AB037773.1| Homo sapiens mRNA for KIAA1352 protein, partial cds Length = 3893 Score = 50.1 bits (25), Expect = 0.009 Identities = 34/37 (91%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || |||||||| ||||||| Sbjct: 2304 aactctgagaagatgtcaaaatccacaggcaacttcc 2340
>ref|XM_453334.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D06105g predicted mRNA Length = 3288 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 425 aagatgtccaagtccacaggtaacttc 451 |||||||||||||| |||||||||||| Sbjct: 2197 aagatgtccaagtctacaggtaacttc 2223
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 425 aagatgtccaagtccacaggtaacttc 451 |||||||||||||| |||||||||||| Sbjct: 523571 aagatgtccaagtctacaggtaacttc 523545
>gb|AC157893.2| Medicago truncatula chromosome 7 BAC clone mth2-7m13, complete sequence Length = 140479 Score = 46.1 bits (23), Expect = 0.14 Identities = 86/107 (80%) Strand = Plus / Plus Query: 2 cagtgggcatgttcacgctcttttggcctaggtacccgcattccatgggatgagcagttc 61 |||||||| || ||||| || ||||| || || || || || ||||||||||| |||||| Sbjct: 112015 cagtgggcttgctcacgatcatttggtcttgggacacgaataccatgggatgaacagttc 112074 Query: 62 ctggtagaatctctctcagattcaaccctgtacatggcttattacac 108 || || || || | || ||||| ||| | ||||||||||||||||| Sbjct: 112075 ctagttgagtccttatctgattccaccatttacatggcttattacac 112121
>ref|XM_729552.1| Plasmodium chabaudi chabaudi hypothetical protein (PC301531.00.0) partial mRNA Length = 648 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 275 tattggtacccatttgatattcgggtatctggcaagga 312 |||||||| |||||||||||||| ||||||| ||||| Sbjct: 529 tattggtatccatttgatattcgaatatctggaaagga 566
>ref|XM_740839.1| Plasmodium chabaudi chabaudi leucyl-tRNA synthetase, cytoplasmic (PC001309.02.0) partial mRNA Length = 3753 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Plus Query: 275 tattggtacccatttgatattcgggtatctggcaagga 312 |||||||| |||||||||||||| ||||||| ||||| Sbjct: 2344 tattggtatccatttgatattcgaatatctggaaagga 2381
>dbj|AB078870.1| Eptatretus stoutii PTPRC gene for CD45, partial cds, clone:C2-GU252 Length = 753 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 tcttgagcaaaatgaagcaaga 267 |||||||||||||||||||||| Sbjct: 449 tcttgagcaaaatgaagcaaga 428
>ref|XM_514522.1| PREDICTED: Pan troglodytes similar to chromosome 20 open reading frame 23; sorting nexin 23; kinesin motor protein (LOC458104), mRNA Length = 6271 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 agcaaaatgaagcaagagttcaagtattg 279 |||| ||||||||||||||||||| |||| Sbjct: 1317 agcagaatgaagcaagagttcaagaattg 1345
>ref|NM_024704.3| Homo sapiens chromosome 20 open reading frame 23 (C20orf23), mRNA Length = 5274 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 agcaaaatgaagcaagagttcaagtattg 279 |||| ||||||||||||||||||| |||| Sbjct: 1384 agcagaatgaagcaagagttcaagaattg 1412
>gb|AE017353.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 13, complete sequence Length = 787999 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 423 agaagatgtccaagtccacaggtaacttc 451 |||||||||||||||| || ||||||||| Sbjct: 383008 agaagatgtccaagtctaccggtaacttc 382980
>gb|AC124749.5| Mus musculus BAC clone RP23-262G23 from chromosome 5, complete sequence Length = 209986 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 508 tgctgatgctggtgatggtatggacgatg 536 |||||||| ||||||||||||||| |||| Sbjct: 94407 tgctgatggtggtgatggtatggatgatg 94435
>gb|BC050577.1| Homo sapiens chromosome 20 open reading frame 23, mRNA (cDNA clone IMAGE:5755129), complete cds Length = 5161 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 agcaaaatgaagcaagagttcaagtattg 279 |||| ||||||||||||||||||| |||| Sbjct: 1385 agcagaatgaagcaagagttcaagaattg 1413
>ref|XM_542882.2| PREDICTED: Canis familiaris inserted sequence in spleen necrosis virus vector provirus clone (LOC485759), mRNA Length = 4317 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 agcaaaatgaagcaagagttcaagtattg 279 |||| ||||||||||||||||||| |||| Sbjct: 1589 agcagaatgaagcaagagttcaagaattg 1617
>ref|XM_568277.1| Cryptococcus neoformans var. neoformans JEC21 leucine-tRNA ligase (CNM01290) partial mRNA Length = 3563 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 423 agaagatgtccaagtccacaggtaacttc 451 |||||||||||||||| || ||||||||| Sbjct: 2427 agaagatgtccaagtctaccggtaacttc 2455
>emb|AL391219.12| Human DNA sequence from clone RP11-118F2 on chromosome 9 Contains the 5' end of the ROR2 gene for receptor tyrosine kinase-like orphan receptor 2, a ribosomal protein L21 (RPL21) pseudogene, a heat shock 10kDa protein 1 (chaperonin 10) (HSPE1) pseudogene, the 3' end of the SPTLC1 gene for serine palmitoyltransferase long chain base subunit 1 and a CpG island, complete sequence Length = 144900 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 325 tcatctgacattcagcatcta 345 ||||||||||||||||||||| Sbjct: 122772 tcatctgacattcagcatcta 122752
>emb|AL356094.11| Human DNA sequence from clone RP11-64I5 on chromosome 6, complete sequence Length = 157588 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 328 tctgacattcagcatctacaa 348 ||||||||||||||||||||| Sbjct: 70823 tctgacattcagcatctacaa 70843
>emb|BX647572.1|HSM807718 Homo sapiens mRNA; cDNA DKFZp313B0719 (from clone DKFZp313B0719) Length = 5215 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 agcaaaatgaagcaagagttcaagtattg 279 |||| ||||||||||||||||||| |||| Sbjct: 1304 agcagaatgaagcaagagttcaagaattg 1332
>emb|CR860686.1| Pongo pygmaeus mRNA; cDNA DKFZp459F1727 (from clone DKFZp459F1727) Length = 3908 Score = 42.1 bits (21), Expect = 2.2 Identities = 33/37 (89%) Strand = Plus / Plus Query: 416 aactctgagaagatgtccaagtccacaggtaacttcc 452 ||||||||||||||||| || ||||| || ||||||| Sbjct: 2286 aactctgagaagatgtcaaaatccacgggcaacttcc 2322
>dbj|AK095322.1| Homo sapiens cDNA FLJ38003 fis, clone CTONG2012158, moderately similar to KINESIN-LIKE PROTEIN KIF1A Length = 2930 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 agcaaaatgaagcaagagttcaagtattg 279 |||| ||||||||||||||||||| |||| Sbjct: 1322 agcagaatgaagcaagagttcaagaattg 1350
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 tatggacaagaaatatcttctatca 164 ||||||||||| ||||||||||||| Sbjct: 6840156 tatggacaagacatatcttctatca 6840180
>gb|AC084428.1|CBRG45F20 Caenorhabditis briggsae cosmid G45F20, complete sequence Length = 40493 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 511 tgatgctggtgatggtatgga 531 ||||||||||||||||||||| Sbjct: 16661 tgatgctggtgatggtatgga 16641
>gb|AY166853.1| Homo sapiens kinesin motor protein mRNA, complete cds Length = 5282 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 agcaaaatgaagcaagagttcaagtattg 279 |||| ||||||||||||||||||| |||| Sbjct: 1384 agcagaatgaagcaagagttcaagaattg 1412
>dbj|AP005826.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0758B01 Length = 159206 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 140 tatggacaagaaatatcttctatca 164 ||||||||||| ||||||||||||| Sbjct: 57882 tatggacaagacatatcttctatca 57906
>dbj|AK000142.1| Homo sapiens cDNA FLJ20135 fis, clone COL06818 Length = 2260 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 agcaaaatgaagcaagagttcaagtattg 279 |||| ||||||||||||||||||| |||| Sbjct: 627 agcagaatgaagcaagagttcaagaattg 655
>dbj|AP006200.1| Homo sapiens genomic DNA, chromosome 6, clone:RP11-688E1, complete sequence Length = 159019 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 agaagaaatgacagatgaagtatgg 193 ||||||||| ||||||||||||||| Sbjct: 74922 agaagaaatcacagatgaagtatgg 74946
>dbj|AB046810.2| Homo sapiens mRNA for KIAA1590 protein, partial cds Length = 4558 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 251 agcaaaatgaagcaagagttcaagtattg 279 |||| ||||||||||||||||||| |||| Sbjct: 1302 agcagaatgaagcaagagttcaagaattg 1330
>gb|AC147718.1| Gallus gallus BAC clone CH261-18A20 from chromosome unknown, complete sequence Length = 185989 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 542 tttgtttttgaaactgcaaat 562 ||||||||||||||||||||| Sbjct: 58622 tttgtttttgaaactgcaaat 58602
>dbj|AP002528.1| Homo sapiens genomic DNA, chromosome 6q21, anti-oncogene region, section 1/4 Length = 300000 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 agaagaaatgacagatgaagtatgg 193 ||||||||| ||||||||||||||| Sbjct: 131401 agaagaaatcacagatgaagtatgg 131425
>dbj|AB042234.1| Homo sapiens genomic DNA, chromosome 6q21, clone:353I20, complete sequence Length = 143320 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 agaagaaatgacagatgaagtatgg 193 ||||||||| ||||||||||||||| Sbjct: 131399 agaagaaatcacagatgaagtatgg 131423
>dbj|AB041511.1| Homo sapiens genomic DNA, chromosome 6q21, clone:57I12, complete sequence Length = 157950 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 169 agaagaaatgacagatgaagtatgg 193 ||||||||| ||||||||||||||| Sbjct: 33811 agaagaaatcacagatgaagtatgg 33835
>gb|AC154240.2| Mus musculus BAC clone RP24-170E23 from chromosome 12, complete sequence Length = 160191 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 508 tgctgatgctggtgatggta 527 |||||||||||||||||||| Sbjct: 9431 tgctgatgctggtgatggta 9450
>ref|XM_425077.1| PREDICTED: Gallus gallus similar to Hypothetical protein MGC76237 (LOC427505), mRNA Length = 1422 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 tagcaacatctctcctgccc 245 |||||||||||||||||||| Sbjct: 150 tagcaacatctctcctgccc 169
>gb|AC101983.16| Mus musculus chromosome 6, clone RP24-352A8, complete sequence Length = 153860 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 aaactttgtttttgaaactg 557 |||||||||||||||||||| Sbjct: 148750 aaactttgtttttgaaactg 148731
>ref|XM_956707.1| Neurospora crassa OR74A hypothetical protein (NCU06528.1) partial mRNA Length = 3150 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gaagatgtccaagtccacag 443 |||||||||||||||||||| Sbjct: 1980 gaagatgtccaagtccacag 1999
>ref|XM_326382.1| Neurospora crassa OR74A hypothetical protein (NCU06528.1) partial mRNA Length = 3150 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 424 gaagatgtccaagtccacag 443 |||||||||||||||||||| Sbjct: 1980 gaagatgtccaagtccacag 1999
>gb|AC093359.6| Mus musculus chromosome 7, clone RP23-57A19, complete sequence Length = 239361 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 cttgctgatgctggtgatgg 525 |||||||||||||||||||| Sbjct: 199665 cttgctgatgctggtgatgg 199684
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 tggcctcgtggttttcgttg 396 |||||||||||||||||||| Sbjct: 8204416 tggcctcgtggttttcgttg 8204435
>gb|AC122882.4| Mus musculus BAC clone RP23-80M17 from chromosome 7, complete sequence Length = 260989 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 cttgctgatgctggtgatgg 525 |||||||||||||||||||| Sbjct: 28109 cttgctgatgctggtgatgg 28128
>ref|XM_391444.1| Gibberella zeae PH-1 chromosome linkage group 14 hypothetical protein (FG11268.1) partial mRNA Length = 9621 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 agaatctctctcagattcaa 86 |||||||||||||||||||| Sbjct: 948 agaatctctctcagattcaa 929
>gb|AC112149.4| Mus musculus BAC clone RP23-186F18 from chromosome 10, complete sequence Length = 195384 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tcaagccagaagaaatgaca 181 |||||||||||||||||||| Sbjct: 7882 tcaagccagaagaaatgaca 7863
>gb|AC122471.4| Mus musculus BAC clone RP24-322M5 from chromosome 2, complete sequence Length = 206592 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 615 ctgctgaatcttctctgaga 634 |||||||||||||||||||| Sbjct: 140669 ctgctgaatcttctctgaga 140688
>emb|Z47075.1|CEE02H1 Caenorhabditis elegans Cosmid E02H1, complete sequence Length = 14588 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 540 actttgtttttgaaactgca 559 |||||||||||||||||||| Sbjct: 1626 actttgtttttgaaactgca 1645
>ref|XM_660721.1| Cryptosporidium hominis TU502 KIAA1352 protein (Chro.50331) partial mRNA Length = 1875 Score = 40.1 bits (20), Expect = 8.6 Identities = 32/36 (88%) Strand = Plus / Plus Query: 509 gctgatgctggtgatggtatggacgatgcaaacttt 544 ||||||||||||||| ||| || |||||||||||| Sbjct: 1483 gctgatgctggtgatactattgatgatgcaaacttt 1518
>emb|AL365225.13| Human DNA sequence from clone RP11-179A5 on chromosome 1 Contains the 5' end of the gene for membrane-associated guanylate kinase-related 3 (MAGI-3) and a CpG island, complete sequence Length = 98795 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 120 atctacaaaatggtaatatgtatg 143 ||||||||||||| |||||||||| Sbjct: 7231 atctacaaaatggaaatatgtatg 7208
>gb|AC145450.4| Mus musculus strain C57BL/6J clone rp23-430i3, complete sequence Length = 208207 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 615 ctgctgaatcttctctgaga 634 |||||||||||||||||||| Sbjct: 84023 ctgctgaatcttctctgaga 84004
>emb|AL353153.18| Human DNA sequence from clone RP5-1000G17 on chromosome 6, complete sequence Length = 95430 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 aaaatggtaatatgtatgga 145 |||||||||||||||||||| Sbjct: 83460 aaaatggtaatatgtatgga 83479
>emb|AL139114.12| Human DNA sequence from clone RP11-328C23 on chromosome 9p22.3-24.1, complete sequence Length = 132139 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 115 tcatcatctacaaaatggtaatat 138 |||||||||| ||||||||||||| Sbjct: 123066 tcatcatctataaaatggtaatat 123089
>emb|AL122016.15|HSJ161C16 Human DNA sequence from clone RP1-161C16 on chromosome 6q14.2-15 Contains a ribosomal protein L31 (RPL31) pseudogene, complete sequence Length = 111453 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 537 caaactttgtttttgaaact 556 |||||||||||||||||||| Sbjct: 63768 caaactttgtttttgaaact 63749
>emb|AL121871.8|HSB258O15 Human DNA sequence from clone RP13-258O15 on chromosome X Contains a ribosomal protein L26 pseudogene, complete sequence Length = 183876 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 catctgacattcagcatcta 345 |||||||||||||||||||| Sbjct: 154976 catctgacattcagcatcta 154995
>emb|Z73100.2|SPAC26F1 S.pombe chromosome I cosmid c26F1 Length = 37960 Score = 40.1 bits (20), Expect = 8.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 506 cttgctgatgctggtgatggtatggacgatgcaaactttg 545 |||||||||||||||||| | | || ||||||||||||| Sbjct: 4298 cttgctgatgctggtgatactgttgatgatgcaaactttg 4337
>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16 Length = 346287 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 gcccttgctgatgctggtgatggt 526 |||||||||||||| ||||||||| Sbjct: 186553 gcccttgctgatgccggtgatggt 186530
>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14 Length = 346259 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 gcccttgctgatgctggtgatggt 526 |||||||||||||| ||||||||| Sbjct: 105696 gcccttgctgatgccggtgatggt 105673
>emb|BX640422.1| Bordetella pertussis strain Tohama I, complete genome; segment 12/12 Length = 257701 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 503 gcccttgctgatgctggtgatggt 526 |||||||||||||| ||||||||| Sbjct: 182590 gcccttgctgatgccggtgatggt 182567
>emb|AL732562.8| Zebrafish DNA sequence from clone CH211-103D22 in linkage group 10 Contains the 3' part of the cxadr gene (coxsackie virus and adenovirus receptor), a novel gene similar to AUTS2 (autism-related protein 1) and four CpG islands, complete sequence Length = 187365 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 538 aaactttgtttttgaaactg 557 |||||||||||||||||||| Sbjct: 10277 aaactttgtttttgaaactg 10258
>emb|AJ235271.1|RPXX02 Rickettsia prowazekii strain Madrid E, complete genome; segment 2/4 Length = 312430 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 132 gtaatatgtatggacaagaaatat 155 |||||||||| ||||||||||||| Sbjct: 97184 gtaatatgtaaggacaagaaatat 97207
>gb|AF321873.1|AF321873 Rhizobium mongolense strain USDA 1844 16S-23S ribosomal RNA intergenic spacer region Length = 1172 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 acgatgcaaactttgttttt 550 |||||||||||||||||||| Sbjct: 629 acgatgcaaactttgttttt 610
>ref|NM_001020311.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC26F1.13c), partial mRNA Length = 3336 Score = 40.1 bits (20), Expect = 8.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 506 cttgctgatgctggtgatggtatggacgatgcaaactttg 545 |||||||||||||||||| | | || ||||||||||||| Sbjct: 2290 cttgctgatgctggtgatactgttgatgatgcaaactttg 2329
>ref|NM_001015831.1| Xenopus tropicalis MGC97760 protein (MGC97760), mRNA Length = 4887 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 425 aagatgtccaagtccacaggtaacttcc 452 |||||||||||||| ||||| ||||||| Sbjct: 2163 aagatgtccaagtctacagggaacttcc 2190
>dbj|AK041716.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630031O13 product:unclassifiable, full insert sequence Length = 598 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 156 cttctatcaagccagaagaaatga 179 ||||||| |||||||||||||||| Sbjct: 291 cttctatgaagccagaagaaatga 314
>gb|AC152954.1| Mus musculus 6 BAC RP23-296N5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203474 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 538 aaactttgtttttgaaactg 557 |||||||||||||||||||| Sbjct: 184523 aaactttgtttttgaaactg 184542
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 tggcctcgtggttttcgttg 396 |||||||||||||||||||| Sbjct: 8202251 tggcctcgtggttttcgttg 8202270
>ref|XM_395743.2| PREDICTED: Apis mellifera similar to CG33123-PA (LOC412282), mRNA Length = 3747 Score = 40.1 bits (20), Expect = 8.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 66 tagaatctctctcagattcaaccctgtacatggcttatta 105 ||||||| |||||||||||||| | || ||||||||||| Sbjct: 1853 tagaatcactctcagattcaacaatttatatggcttatta 1892
>gb|AC158807.11| Mus musculus 10 BAC RP24-64G24 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 228073 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 tcaagccagaagaaatgaca 181 |||||||||||||||||||| Sbjct: 79782 tcaagccagaagaaatgaca 79801
>gb|AC153556.5| Mus musculus 10 BAC RP23-395M5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 184751 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 156 cttctatcaagccagaagaaatga 179 ||||||| |||||||||||||||| Sbjct: 46485 cttctatgaagccagaagaaatga 46462
>gb|AC017040.7| Homo sapiens BAC clone RP11-319B20 from 2, complete sequence Length = 178446 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 613 agctgctgaatcttctctga 632 |||||||||||||||||||| Sbjct: 79016 agctgctgaatcttctctga 78997
>gb|AC134234.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0019J12, complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 377 tggcctcgtggttttcgttg 396 |||||||||||||||||||| Sbjct: 135846 tggcctcgtggttttcgttg 135865
>gb|BC090117.1| Xenopus tropicalis MGC97760 protein, mRNA (cDNA clone MGC:97760 IMAGE:6988525), complete cds Length = 4887 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 425 aagatgtccaagtccacaggtaacttcc 452 |||||||||||||| ||||| ||||||| Sbjct: 2163 aagatgtccaagtctacagggaacttcc 2190
>gb|AC019070.7| Homo sapiens BAC clone RP11-264M11 from 2, complete sequence Length = 94453 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 118 tcatctacaaaatggtaata 137 |||||||||||||||||||| Sbjct: 5431 tcatctacaaaatggtaata 5412
>gb|AC010977.4|AC010977 Homo sapiens BAC clone RP11-362J16 from Y, complete sequence Length = 136285 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 326 catctgacattcagcatcta 345 |||||||||||||||||||| Sbjct: 12127 catctgacattcagcatcta 12146
>gb|AC004544.1|AC004544 Homo sapiens BAC clone CTB-162B4 from 4, complete sequence Length = 168644 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 ctacaaaatggtaatatgta 141 |||||||||||||||||||| Sbjct: 148261 ctacaaaatggtaatatgta 148242
>gb|AC156563.1| Mus musculus BAC clone RP24-255E14 from 12, complete sequence Length = 175641 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 508 tgctgatgctggtgatggta 527 |||||||||||||||||||| Sbjct: 35329 tgctgatgctggtgatggta 35310
>emb|CR925735.15| Zebrafish DNA sequence from clone CH211-105G15 in linkage group 17, complete sequence Length = 83530 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 gagcaaaatgaagcaagagt 269 |||||||||||||||||||| Sbjct: 29785 gagcaaaatgaagcaagagt 29804
>emb|CT573085.6| Mouse DNA sequence from clone RP23-436A20 on chromosome 13, complete sequence Length = 186441 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 gatgcaaactttgtttttga 552 |||||||||||||||||||| Sbjct: 25293 gatgcaaactttgtttttga 25274
>emb|AL732309.9| Mouse DNA sequence from clone RP23-132N23 on chromosome 2, complete sequence Length = 221859 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 615 ctgctgaatcttctctgaga 634 |||||||||||||||||||| Sbjct: 19688 ctgctgaatcttctctgaga 19669
>gb|AF345273.1| Rhizobium mongolense strain USDA 1844 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA, partial sequence Length = 1200 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 acgatgcaaactttgttttt 550 |||||||||||||||||||| Sbjct: 650 acgatgcaaactttgttttt 631
>gb|AF345267.1| Rhizobium gallicum strain R 602 clone 1 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA, partial sequence Length = 1079 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 acgatgcaaactttgttttt 550 |||||||||||||||||||| Sbjct: 609 acgatgcaaactttgttttt 590
>gb|AF345266.1| Rhizobium gallicum strain R 602 clone 2 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA, partial sequence Length = 1162 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 acgatgcaaactttgttttt 550 |||||||||||||||||||| Sbjct: 609 acgatgcaaactttgttttt 590
>dbj|D89170.1| Schizosaccharomyces pombe mRNA, partial cds, clone: SY 0717 Length = 1118 Score = 40.1 bits (20), Expect = 8.6 Identities = 35/40 (87%) Strand = Plus / Plus Query: 506 cttgctgatgctggtgatggtatggacgatgcaaactttg 545 |||||||||||||||||| | | || ||||||||||||| Sbjct: 76 cttgctgatgctggtgatactgttgatgatgcaaactttg 115 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,243,679 Number of Sequences: 3902068 Number of extensions: 6243679 Number of successful extensions: 124227 Number of sequences better than 10.0: 109 Number of HSP's better than 10.0 without gapping: 109 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 123826 Number of HSP's gapped (non-prelim): 395 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
