ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8h18 |
|---|---|
| Clone Library Name | barley_pub |
>NPL4_RAT (Q9ES54) Nuclear protein localization protein 4 homolog (Protein| NPL4) Length = 607 Score = 40.8 bits (94), Expect = 0.002 Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 19/108 (17%) Frame = +2 Query: 11 DAIADGLGMRRVGFVFTQAVG--------RKASETGEYTLSNSEVVQA----------AQ 136 D IA LG+R+VG++FT V R + Y LS+ E + A + Sbjct: 296 DEIASKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICR 355 Query: 137 LQAEGGI-PEWVTAVVKLEVGEDGSADVHFEAFQMSEVCVKLFKDGVL 277 L +G ++VTAV G D VHFE +Q+S C+ L +D L Sbjct: 356 LSPDGHFGSKFVTAVA--TGGPDN--QVHFEGYQVSNQCMALVRDECL 399
>NPL4_MOUSE (P60670) Nuclear protein localization protein 4 homolog (Protein| NPL4) Length = 607 Score = 40.0 bits (92), Expect = 0.003 Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 19/108 (17%) Frame = +2 Query: 11 DAIADGLGMRRVGFVFTQAVG--------RKASETGEYTLSNSEVVQA----------AQ 136 D IA LG+R+VG++FT V R + Y LS+ E + A + Sbjct: 296 DEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNICR 355 Query: 137 LQAEGGI-PEWVTAVVKLEVGEDGSADVHFEAFQMSEVCVKLFKDGVL 277 L +G ++VTAV G D VHFE +Q+S C+ L +D L Sbjct: 356 LSPDGHFGSKFVTAVA--TGGPDN--QVHFEGYQVSNQCMALVRDECL 399
>NPL4_HUMAN (Q8TAT6) Nuclear protein localization protein 4 homolog (Protein| NPL4) Length = 607 Score = 40.0 bits (92), Expect = 0.003 Identities = 35/108 (32%), Positives = 50/108 (46%), Gaps = 19/108 (17%) Frame = +2 Query: 11 DAIADGLGMRRVGFVFTQAVG--------RKASETGEYTLSNSEVVQA----------AQ 136 D IA LG+R+VG++FT V R + Y LS+ E + A + Sbjct: 296 DEIAAKLGLRKVGWIFTDLVSEDTRKGTVRYSRNKDTYFLSSEECITAGDFQNKHPNMCR 355 Query: 137 LQAEGGI-PEWVTAVVKLEVGEDGSADVHFEAFQMSEVCVKLFKDGVL 277 L +G ++VTAV G D VHFE +Q+S C+ L +D L Sbjct: 356 LSPDGHFGSKFVTAVA--TGGPDN--QVHFEGYQVSNQCMALVRDECL 399
>RPIA_STRT2 (Q5M481) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 226 Score = 32.7 bits (73), Expect = 0.42 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = +2 Query: 8 EDAIADGLGMRRVGFVFTQAVGRKASETGEYTLSNSEVVQAAQLQAEG-GIP-EWVTAVV 181 ED + GLG + F + +GR+ E G + + Q + QAEG GIP + V + Sbjct: 17 EDGMVVGLGTGSTAYFFVEEIGRRIKEEGLSVVGVTTSTQTTK-QAEGLGIPLKSVDDID 75 Query: 182 KLEVGEDGSADV 217 ++V DG+ +V Sbjct: 76 SIDVTVDGADEV 87
>RPIA_STRT1 (Q5LZM5) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 226 Score = 32.0 bits (71), Expect = 0.71 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%) Frame = +2 Query: 8 EDAIADGLGMRRVGFVFTQAVGRKASETGEYTLSNSEVVQAAQLQAEG-GIP-EWVTAVV 181 ED + GLG + F + +GR+ E G + + Q + QAEG GIP + V + Sbjct: 17 EDGMVVGLGTGSTAYFFVEEIGRRIKEEGLSVVGVTTSSQTTK-QAEGLGIPLKSVDDID 75 Query: 182 KLEVGEDGSADV 217 ++V DG+ +V Sbjct: 76 SIDVTVDGADEV 87
>MUC2_RAT (Q62635) Mucin-2 precursor (Intestinal mucin 2) (Fragment)| Length = 1513 Score = 32.0 bits (71), Expect = 0.71 Identities = 22/64 (34%), Positives = 30/64 (46%) Frame = -3 Query: 198 SPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPVSLAFLPTACVKTNPTRRMPSPSA 19 SPT+S TT+ T P+ S + TTS SP + PT T+ T PSP+ Sbjct: 1435 SPTTSPTTSTTSPTTSPTT-STTSPTTSTTSPTPSPTTSTTSPTPSPTTSTTSPTPSPTT 1493 Query: 18 MASS 7 +S Sbjct: 1494 STTS 1497 Score = 30.8 bits (68), Expect = 1.6 Identities = 28/76 (36%), Positives = 34/76 (44%), Gaps = 3/76 (3%) Frame = -3 Query: 225 SKCTSAEPSS---PTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPVSLAFLPTACVK 55 S TS SS PTSS TT T S + SA S TTS + SP + T Sbjct: 1392 SPTTSTPISSTPQPTSSPTTLPTTSPLTSSATSP---TTSHITSTVSPTTSPTTSTTSPT 1448 Query: 54 TNPTRRMPSPSAMASS 7 T+PT SP+ +S Sbjct: 1449 TSPTTSTTSPTTSTTS 1464 Score = 28.9 bits (63), Expect = 6.0 Identities = 22/73 (30%), Positives = 32/73 (43%) Frame = -3 Query: 225 SKCTSAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPVSLAFLPTACVKTNP 46 S T+ +SP +S T+ T S I + + TTS SP + PT T+ Sbjct: 1407 SSPTTLPTTSPLTSSATSPTTSHITSTVSPTTSPTTSTTSPTTSPTTSTTSPT----TST 1462 Query: 45 TRRMPSPSAMASS 7 T PSP+ +S Sbjct: 1463 TSPTPSPTTSTTS 1475
>E3GL_ADE35 (P68981) Early E3 18.5 kDa glycoprotein precursor (GP19K) (E3-19K)| (E3gp 19-kDa) (E19) Length = 166 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 Query: 146 EGGIPEWVTAVVKLEVGEDGSADVHFEAFQMSEVC 250 E G+PEW T V+ G DGS + F SE+C Sbjct: 75 EPGVPEWYTVSVR---GPDGSIRISNNTFIFSEMC 106
>E3GL_ADE1P (P68980) Early E3 18.5 kDa glycoprotein precursor (GP19K) (E3-19K)| (E3gp 19-kDa) (E19) Length = 166 Score = 30.8 bits (68), Expect = 1.6 Identities = 15/35 (42%), Positives = 19/35 (54%) Frame = +2 Query: 146 EGGIPEWVTAVVKLEVGEDGSADVHFEAFQMSEVC 250 E G+PEW T V+ G DGS + F SE+C Sbjct: 75 EPGVPEWYTVSVR---GPDGSIRISNNTFIFSEMC 106
>VIV1_MAIZE (P26307) Regulatory protein viviparous-1| Length = 691 Score = 30.8 bits (68), Expect = 1.6 Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -3 Query: 168 THSG-IPPSACSWAAWTTSLLDRVYSPVSLAFLPTACVKTNPTRRMPSPSAMASS 7 THSG + PSA W W+ S +V +P+S K+N +R PS A++ Sbjct: 432 THSGPVTPSAGGWGFWSPSSQQQVQNPLS---------KSNSSRAPPSSLEAAAA 477
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.4 bits (67), Expect = 2.1 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 4/97 (4%) Frame = -3 Query: 402 SEILTGTRKKSLSTSMVSFP--PAITSLRILDRRGXXXXXXXXXXXXXXXXXTQTSLIWK 229 +E TGT +T+ + P PA++S R ++T+ Sbjct: 3455 TEPSTGTSHTPAATTGTTQPSTPALSSPHPSSRTTESPPSPGTTTPGHTRGTSRTTATAT 3514 Query: 228 ASKCTSAE--PSSPTSSFTTAVTHSGIPPSACSWAAW 124 SK ++ PSSPTS+ T V +G P C+W+ W Sbjct: 3515 PSKTRTSTLLPSSPTSAPITTVVTTGCEPQ-CAWSEW 3550 Score = 29.3 bits (64), Expect = 4.6 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -3 Query: 204 PSSPTSSFTTAVTHSGIPPSACSWAAW 124 PSSPTS+ T V G P C+W+ W Sbjct: 2827 PSSPTSAPITTVVTMGCEPQ-CAWSEW 2852
>PHNC2_RHOPA (Q6NA00) Phosphonates import ATP-binding protein phnC 2 (EC| 3.6.3.28) Length = 284 Score = 30.4 bits (67), Expect = 2.1 Identities = 27/71 (38%), Positives = 36/71 (50%), Gaps = 3/71 (4%) Frame = -2 Query: 301 VGVLDLRLQHAVLEQLDADLAHLEGLEVHVGRAVFPHLQLHHGGDPLR--DPALCLQLGG 128 VG+LDL + A L+ E V V RA+ +L G +P DPAL QLGG Sbjct: 151 VGLLDLATRRT------AQLSGGERQRVGVARALIRRPKLLLGDEPFASVDPALAQQLGG 204 Query: 127 L-DDLAVGQGV 98 L LA+ +G+ Sbjct: 205 LFRSLAMREGL 215
>RPIA_STRMU (Q8DTT9) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 225 Score = 30.4 bits (67), Expect = 2.1 Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = +2 Query: 8 EDAIADGLGMRRVGFVFTQAVGRKASETGEYTLS-NSEVVQAAQLQAEGGIPEWVTAVVK 184 ED + GLG + F + VGR+ E G + + AQ QA G + + V Sbjct: 17 EDGMIVGLGTGSTAYYFVEEVGRRVQEEGLQVIGVTTSSRTTAQAQALGIPLKSIDEVDS 76 Query: 185 LEVGEDGSADV 217 ++V DG+ +V Sbjct: 77 VDVTVDGADEV 87
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 30.0 bits (66), Expect = 2.7 Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 3/131 (2%) Frame = -3 Query: 402 SEILTGTRKKSL---STSMVSFPPAITSLRILDRRGXXXXXXXXXXXXXXXXXTQTSLIW 232 ++I + TR+ S S+ M++ + TS T +S Sbjct: 163 AQISSTTRRTSTDMKSSEMIATTVSTTSTTSSSTSSTTSSTTSSTTSSTTSSTTSSS--- 219 Query: 231 KASKCTSAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPVSLAFLPTACVKT 52 S TS+ SS TSS T++ T S + S + TTS+ S S+ ++ T Sbjct: 220 -TSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSIFSVTSSSSSITL--SSSEHT 276 Query: 51 NPTRRMPSPSA 19 R SPS+ Sbjct: 277 TVDSRTSSPSS 287
>LDB3_MOUSE (Q9JKS4) LIM domain-binding protein 3 (Z-band alternatively spliced| PDZ-motif protein) (Protein cypher) (Protein oracle) Length = 723 Score = 30.0 bits (66), Expect = 2.7 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%) Frame = -3 Query: 231 KASKCTSAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPV-SLAFLPTACVK 55 +AS + A +SP S T+ + P+ T S+ VY PV + ++ P+ Sbjct: 360 QASAYSPAAAASPAPSAHTSYSEGPAAPAPKPRVVTTASIRPSVYQPVPASSYSPSPGAN 419 Query: 54 TNPTRRMPSPS 22 +PT PSP+ Sbjct: 420 YSPTPYTPSPA 430
>RS4_HELPY (P56011) 30S ribosomal protein S4| Length = 208 Score = 30.0 bits (66), Expect = 2.7 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +2 Query: 86 ETGEYTLSNSEVVQAAQLQAEGGIPEWV 169 E E T SNS+VV+A +L A+ GI W+ Sbjct: 146 EIKEKTKSNSQVVRAMELTAQTGIVPWI 173
>NMI_MOUSE (O35309) N-myc-interactor (Nmi) (N-myc and STAT interactor)| Length = 314 Score = 30.0 bits (66), Expect = 2.7 Identities = 28/105 (26%), Positives = 51/105 (48%), Gaps = 5/105 (4%) Frame = +2 Query: 128 AAQLQAEGGIPEWVTAVVKLEVGEDGSADVHFE----AFQMS-EVCVKLFKDGVLETEVK 292 A + Q + +PE + +E +DG HF +FQ+S ++ +L + L T K Sbjct: 56 AREFQIKENVPEKKLKLTSVESPKDGC---HFSNSSCSFQVSSQILYELQEGQALITFEK 112 Query: 293 DSDDPRLSKMRKEVIAGGKDTMEVDNDFFLVPVKISDHQGPLSTG 427 + ++ + VI+ G ++++ PVK+S H PL+TG Sbjct: 113 E-------EVAQNVISMGNHVVQMEG----TPVKVSAHPVPLNTG 146
>YFGG_SCHPO (O13854) Hypothetical serine/threonine-rich protein C19G12.16c| precursor Length = 670 Score = 29.6 bits (65), Expect = 3.5 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 11/80 (13%) Frame = -3 Query: 216 TSAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTS--------LLDRVYSPVSL---AFLP 70 T P+S TSSF+T +T++ + PS+ S+ T S L V S SL + LP Sbjct: 188 TLPPPASSTSSFST-ITNTSMIPSSSSFTTTTGSPYYNTSSFLPSSVISSASLSSSSVLP 246 Query: 69 TACVKTNPTRRMPSPSAMAS 10 T+ + + T S S+++S Sbjct: 247 TSIITSTSTPVTVSSSSLSS 266
>ZN638_MOUSE (Q61464) Zinc finger protein 638 (Nuclear protein 220) (Zinc-finger| matrin-like protein) Length = 1960 Score = 29.6 bits (65), Expect = 3.5 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%) Frame = +2 Query: 224 EAFQMSEVCVKLFKDGVLETEVKDSDDPRLSKMRKEVIAGGKDTMEVDNDF-FLVP 388 EAFQMSE GV + E+KDS+ + ++ G T +V D FLVP Sbjct: 1859 EAFQMSE--------GVDDAELKDSEPDEKRRKTQDSSVGKSMTSDVPGDLDFLVP 1906
>RPIA_METTH (P72012) Ribose-5-phosphate isomerase A (EC 5.3.1.6)| (Phosphoriboisomerase A) (PRI) Length = 226 Score = 29.3 bits (64), Expect = 4.6 Identities = 20/70 (28%), Positives = 30/70 (42%) Frame = +2 Query: 8 EDAIADGLGMRRVGFVFTQAVGRKASETGEYTLSNSEVVQAAQLQAEGGIPEWVTAVVKL 187 +D GLG F + +GR+ E G + Q+ L AE GI A + Sbjct: 20 DDGDVVGLGTGSTTHYFIEELGRRVREEGLEVMGVPTSYQSMFLAAESGIKVTSLAEHDV 79 Query: 188 EVGEDGSADV 217 +V DG+ +V Sbjct: 80 DVAVDGADEV 89
>GP112_HUMAN (Q8IZF6) Probable G-protein coupled receptor 112| Length = 2799 Score = 29.3 bits (64), Expect = 4.6 Identities = 20/73 (27%), Positives = 34/73 (46%) Frame = -3 Query: 240 LIWKASKCTSAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPVSLAFLPTAC 61 L W S S P + S+ +T S + S + + TS + + +L LP+A Sbjct: 1943 LTWLLSSLPSGSPPATVSNAPHVMTSSTVEVSK---STFLTSDMISAHPFTNLTTLPSAT 1999 Query: 60 VKTNPTRRMPSPS 22 + T TR +P+P+ Sbjct: 2000 MSTILTRTIPTPT 2012
>YK02_SCHPO (Q9HDY9) Hypothetical serine/threonine-rich protein P11E10.02c| precursor Length = 1082 Score = 29.3 bits (64), Expect = 4.6 Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 3/124 (2%) Frame = -3 Query: 384 TRKKSLSTSMVS---FPPAITSLRILDRRGXXXXXXXXXXXXXXXXXTQTSLIWKASKCT 214 T+ SLS+S +S F A +SL + + + QTS S Sbjct: 506 TKFSSLSSSQLSTENFTSASSSLSLTNAKSSLSTPSTTIPTSNSSVSLQTSSSLIISSPI 565 Query: 213 SAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPVSLAFLPTACVKTNPTRRM 34 + + TS+ T A+THS I PS S +T+SL+ + S + + T C +N T + Sbjct: 566 ISSSLTATSTSTPALTHS-ITPSNTS---YTSSLIPSSSTDYSSSLI-TVC--SNVTSEI 618 Query: 33 PSPS 22 S S Sbjct: 619 SSTS 622
>TILS_HAEIN (P44689) tRNA(Ile)-lysidine synthase (EC 6.3.4.-)| (tRNA(Ile)-lysidine synthetase) (tRNA(Ile)-2-lysyl-cytidine synthase) Length = 430 Score = 29.3 bits (64), Expect = 4.6 Identities = 16/53 (30%), Positives = 23/53 (43%) Frame = -3 Query: 246 TSLIWKASKCTSAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPV 88 T L+ +K +P P S H G+ P+A SWA L D+ P+ Sbjct: 30 TVLLSLFAKLCQKQPHLPPLSIRAIHIHHGLSPNADSWAKHCQDLCDQFQIPL 82
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 29.3 bits (64), Expect = 4.6 Identities = 24/74 (32%), Positives = 37/74 (50%) Frame = -3 Query: 228 ASKCTSAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPVSLAFLPTACVKTN 49 +S TS SSP+S+ T + + + SA S A+ TTS+ S + PTA T Sbjct: 62 SSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTST-STETTTTTPTAST-TT 119 Query: 48 PTRRMPSPSAMASS 7 PT +P+ A++ Sbjct: 120 PTTTTAAPTTAATT 133
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 29.3 bits (64), Expect = 4.6 Identities = 24/74 (32%), Positives = 37/74 (50%) Frame = -3 Query: 228 ASKCTSAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPVSLAFLPTACVKTN 49 +S TS SSP+S+ T + + + SA S A+ TTS+ S + PTA T Sbjct: 62 SSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTASSTTSIPTST-STETTTTTPTAST-TT 119 Query: 48 PTRRMPSPSAMASS 7 PT +P+ A++ Sbjct: 120 PTTTTAAPTTAATT 133
>NIFD_CLOPA (P00467) Nitrogenase molybdenum-iron protein alpha chain (EC| 1.18.6.1) (Nitrogenase component I) (Dinitrogenase) Length = 533 Score = 29.3 bits (64), Expect = 4.6 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = +2 Query: 266 DGVLET---EVKDSDDPRLSKMRKEVIAGGKDTMEVDNDFF 379 DG++ET K DDP L+K +EVIA ++ D D+F Sbjct: 289 DGIVETLRDMAKCFDDPELTKRTEEVIAEEIAAIQDDLDYF 329
>ACSA_RHOCA (O68040) Acetyl-coenzyme A synthetase (EC 6.2.1.1) (Acetate--CoA| ligase) (Acyl-activating enzyme) Length = 656 Score = 28.5 bits (62), Expect = 7.9 Identities = 25/98 (25%), Positives = 38/98 (38%) Frame = +2 Query: 8 EDAIADGLGMRRVGFVFTQAVGRKASETGEYTLSNSEVVQAAQLQAEGGIPEWVTAVVKL 187 + ++A L GF A G K E +L N + EG +W+T K+ Sbjct: 6 QPSVAPALREVPAGFETAHANGAKYLEMYRESLENPDAFWGR----EGKRLDWITPYTKV 61 Query: 188 EVGEDGSADVHFEAFQMSEVCVKLFKDGVLETEVKDSD 301 + + F +V +K F+DGVL V D Sbjct: 62 KNTD----------FTFGKVSIKWFEDGVLNASVNCID 89
>RBGPR_MOUSE (Q8BMG7) Rab3 GTPase-activating protein non-catalytic subunit (Rab3| GTPase-activating protein 150 kDa subunit) (Rab3-GAP p150) (Rab3-GAP regulatory subunit) (RAB3-GAP150) Length = 1366 Score = 28.5 bits (62), Expect = 7.9 Identities = 22/80 (27%), Positives = 36/80 (45%) Frame = +2 Query: 71 GRKASETGEYTLSNSEVVQAAQLQAEGGIPEWVTAVVKLEVGEDGSADVHFEAFQMSEVC 250 G ++E GEY S + A+Q ++ G P+W VV G V F + + Sbjct: 121 GSVSAEEGEYVTSALCIPLASQKRSSTGRPDWTCIVVGFTSGY-----VRFYTEGVLLLA 175 Query: 251 VKLFKDGVLETEVKDSDDPR 310 L +D VL+ + + + PR Sbjct: 176 QLLNEDKVLQLKCRTYEIPR 195
>DXS_CHRVO (Q7NUK5) 1-deoxy-D-xylulose-5-phosphate synthase (EC 2.2.1.7)| (1-deoxyxylulose-5-phosphate synthase) (DXP synthase) (DXPS) Length = 616 Score = 28.5 bits (62), Expect = 7.9 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = -2 Query: 229 GLEVHVGRAVFPHLQLHHGGDPLRDPALCLQLGGLDDLAVGQGVLARLAG 80 GL V P + HG DPAL L L GLD + + + RLAG Sbjct: 572 GLAVPTLHLGLPDDYVEHG-----DPALLLSLCGLDAAGIEKSIRERLAG 616
>PLSB_CARTI (Q42713) Glycerol-3-phosphate acyltransferase, chloroplast| precursor (EC 2.3.1.15) (GPAT) Length = 463 Score = 28.5 bits (62), Expect = 7.9 Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 10/76 (13%) Frame = -3 Query: 204 PSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPV-----SLAFLPTA-----CVK 55 PSSPT F+T + + PS+ +A+T L P+ LAF A + Sbjct: 7 PSSPTLFFSTTNANPRVSPSSSPSSAFTPPLSSSRLRPILRGFPCLAFSAPANAAHGTAE 66 Query: 54 TNPTRRMPSPSAMASS 7 T + PSPS+ +S+ Sbjct: 67 TVHGNKWPSPSSSSSA 82
>IF3A_ARATH (Q9LD55) Eukaryotic translation initiation factor 3 subunit 10 (eIF-3| theta) (Eukaryotic translation initiation factor 3 large subunit) (eIF3a) (p114) Length = 987 Score = 28.5 bits (62), Expect = 7.9 Identities = 13/36 (36%), Positives = 18/36 (50%) Frame = -3 Query: 234 WKASKCTSAEPSSPTSSFTTAVTHSGIPPSACSWAA 127 WK + PS+PTSS T ++ G PP W + Sbjct: 900 WKRQTTEVSGPSAPTSSETDRRSNRGPPPGDDHWGS 935
>RBGPR_RAT (Q5U1Z0) Rab3 GTPase-activating protein non-catalytic subunit (Rab3| GTPase-activating protein 150 kDa subunit) (Rab3-GAP p150) (Rab3-GAP regulatory subunit) (RAB3-GAP150) Length = 1386 Score = 28.5 bits (62), Expect = 7.9 Identities = 22/80 (27%), Positives = 36/80 (45%) Frame = +2 Query: 71 GRKASETGEYTLSNSEVVQAAQLQAEGGIPEWVTAVVKLEVGEDGSADVHFEAFQMSEVC 250 G ++E GEY S + A+Q ++ G P+W VV G V F + + Sbjct: 121 GSVSAEEGEYVTSALCIPLASQKRSSTGRPDWTCIVVGFTSGY-----VRFYTEGVLLLA 175 Query: 251 VKLFKDGVLETEVKDSDDPR 310 L +D VL+ + + + PR Sbjct: 176 QLLNEDRVLQLKCRTYEIPR 195
>NU5C_GERJA (P51100) NAD(P)H-quinone oxidoreductase chain 5, chloroplast (EC| 1.6.5.-) (NAD(P)H dehydrogenase, chain 5) (NADH-plastoquinone oxidoreductase chain 5) Length = 744 Score = 28.5 bits (62), Expect = 7.9 Identities = 15/43 (34%), Positives = 21/43 (48%) Frame = -3 Query: 216 TSAEPSSPTSSFTTAVTHSGIPPSACSWAAWTTSLLDRVYSPV 88 T P + TS F ++ GIPP AC W+ +YSP+ Sbjct: 388 TKHVPITKTSFFLGTLSLCGIPPLACFWSKDEILNDSWLYSPI 430
>RUVC_EHRCJ (Q3YT96) Crossover junction endodeoxyribonuclease ruvC (EC| 3.1.22.4) (Holliday junction nuclease ruvC) (Holliday juction resolvase ruvC) Length = 156 Score = 28.5 bits (62), Expect = 7.9 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = +2 Query: 251 VKLFKDGVLETEVKDSDDPRLSKMRKEVI 337 +KL +GV++T K++ RL+K+ KE+I Sbjct: 24 IKLIGNGVIKTNNKETPGQRLNKIHKELI 52 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.141 0.427 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 54,049,086 Number of Sequences: 219361 Number of extensions: 1061113 Number of successful extensions: 3377 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 3259 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3367 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2677159704 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.8 bits)
