Clone Name	baal8h14
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_464147.1| Oryza sativa (japonica cultivar-group), mRNA	353	3e-94
2	ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group...	353	3e-94
3	dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clon...	353	3e-94
4	dbj|AK119490.1| Oryza sativa (japonica cultivar-group) cDNA clon...	353	3e-94
5	dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clon...	353	3e-94
6	ref|XM_450542.1| Oryza sativa (japonica cultivar-group), mRNA	291	9e-76
7	dbj|AK071400.1| Oryza sativa (japonica cultivar-group) cDNA clon...	291	9e-76
8	dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...	105	1e-19
9	dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic D...	105	1e-19
10	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	74	4e-10
11	dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic D...	74	4e-10
12	dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic D...	74	4e-10
13	ref|NM_118989.2| Arabidopsis thaliana unknown protein AT4G28470 ...	68	2e-08
14	gb|AY230829.1| Arabidopsis thaliana 26S proteasome subunit RPN1b...	68	2e-08
15	gb|AY069881.1| Arabidopsis thaliana AT4g28470/F20O9_150 mRNA seq...	68	2e-08
16	dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...	66	9e-08
17	dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic D...	66	9e-08
18	ref|NM_127618.2| Arabidopsis thaliana unknown protein AT2G20580 ...	60	6e-06
19	gb|AY230828.1| Arabidopsis thaliana 26S proteasome subunit RPN1a...	60	6e-06
20	gb|BT012021.1| Arabidopsis thaliana At4g08140 mRNA sequence	60	6e-06
21	gb|AY040061.1| Arabidopsis thaliana putative 26S proteasome regu...	60	6e-06
22	gb|AF360216.1| Arabidopsis thaliana putative 26S proteasome regu...	60	6e-06
23	gb|AC007048.5| Arabidopsis thaliana chromosome 2 clone F23N11 ma...	54	4e-04
24	gb|AC151527.13| Medicago truncatula clone mth2-135i19, complete ...	48	0.022
25	emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, ...	46	0.085
26	emb|AL021749.1|ATF20O9 Arabidopsis thaliana DNA chromosome 4, BA...	46	0.085
27	gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Ca...	46	0.085
28	emb|AL591771.1|CNS07EGO Human chromosome 14 DNA sequence BAC R-7...	44	0.34
29	gb|AC168222.2| Mus musculus BAC clone CH25-395E5 from chromosome...	42	1.3
30	gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome...	42	1.3
31	gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genom...	42	1.3
32	gb|BC007897.2| Homo sapiens proteasome (prosome, macropain) 26S ...	42	1.3
33	ref|NM_002808.3| Homo sapiens proteasome (prosome, macropain) 26...	42	1.3
34	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	42	1.3
35	ref|XM_805570.1| Trypanosoma cruzi strain CL Brener hypothetical...	42	1.3
36	gb|BT009736.1| Homo sapiens proteasome (prosome, macropain) 26S ...	42	1.3
37	gb|BT009735.1| Synthetic construct Homo sapiens proteasome (pros...	42	1.3
38	emb|AL162014.1|HSM802541 Homo sapiens mRNA; cDNA DKFZp564A2282 (...	42	1.3
39	emb|CR859401.1| Pongo pygmaeus mRNA; cDNA DKFZp459L0427 (from cl...	42	1.3
40	emb|CR859332.1| Pongo pygmaeus mRNA; cDNA DKFZp459I0428 (from cl...	42	1.3
41	emb|CR620212.1| full-length cDNA clone CS0DK010YG02 of HeLa cell...	42	1.3
42	dbj|AK095245.1| Homo sapiens cDNA FLJ37926 fis, clone CTONG20009...	42	1.3
43	dbj|AB169862.1| Macaca fascicularis brain cDNA, clone: QccE-1853...	42	1.3
44	dbj|AB168509.1| Macaca fascicularis testis cDNA clone: QtsA-1264...	42	1.3
45	dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.3
46	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.3
47	gb|BC056516.1| Danio rerio proteasome (prosome, macropain) 26S s...	42	1.3
48	ref|NM_200546.1| Danio rerio proteasome (prosome, macropain) 26S...	42	1.3
49	gb|AY892426.1| Synthetic construct Homo sapiens clone FLH022847....	42	1.3
50	gb|AY892425.1| Synthetic construct Homo sapiens clone FLH022846....	42	1.3
51	gb|AY889948.1| Synthetic construct Homo sapiens clone FLH022851....	42	1.3
52	gb|AY889947.1| Synthetic construct Homo sapiens clone FLH022850....	42	1.3
53	dbj|AK119372.1| Oryza sativa (japonica cultivar-group) cDNA clon...	42	1.3
54	gb|BC002368.2| Homo sapiens proteasome (prosome, macropain) 26S ...	42	1.3
55	gb|BC002997.1| Homo sapiens proteasome (prosome, macropain) 26S ...	42	1.3
56	dbj|AB209843.1| Homo sapiens mRNA for proteasome 26S non-ATPase ...	42	1.3
57	gb|U12596.1|HSU12596 Human tumor necrosis factor type 1 receptor...	42	1.3
58	emb|X86446.1|HSRNA5511 H.sapiens mRNA for 55.11 binding protein	42	1.3
59	dbj|D78151.1|HUM26SPSP Human mRNA for 26S proteasome subunit p97...	42	1.3
60	gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, compl...	40	5.3
61	gb|AC110538.6| Mus musculus chromosome 5, clone RP23-71L23, comp...	40	5.3
62	gb|AC144645.17| Medicago truncatula clone mth2-11e15, complete s...	40	5.3
63	emb|AL451140.15| Human DNA sequence from clone RP11-540H22 on ch...	40	5.3
64	emb|AL159999.15| Human DNA sequence from clone RP11-8I8 on chrom...	40	5.3
65	gb|AC158754.4| Mus musculus chromosome 5, clone RP24-167K16, com...	40	5.3
66	emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, ...	40	5.3
67	emb|AL050398.1|ATL23H3 Arabidopsis thaliana DNA chromosome 4, co...	40	5.3
68	gb|BC098489.1| Mus musculus synuclein, alpha interacting protein...	40	5.3
69	gb|AC021070.24| Homo sapiens 12 BAC RP11-460N10 (Roswell Park Ca...	40	5.3
70	gb|AC108111.3| Homo sapiens chromosome 5 clone RP11-266I10, comp...	40	5.3
71	gb|AC026790.5| Homo sapiens chromosome 5 clone CTD-2228A4, compl...	40	5.3
72	ref|NM_026408.3| Mus musculus synuclein, alpha interacting prote...	40	5.3
73	dbj|AK132346.1| Mus musculus 15 days embryo head cDNA, RIKEN ful...	40	5.3
74	dbj|AK160111.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu...	40	5.3
75	gb|AY057102.1| Arabidopsis thaliana flavin-containing monooxygen...	40	5.3
76	dbj|AK017012.1| Mus musculus adult male testis cDNA, RIKEN full-...	40	5.3
77	ref|XM_343228.2| PREDICTED: Rattus norvegicus ring finger protei...	40	5.3
78	gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, comple...	40	5.3
79	gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, co...	40	5.3
80	gb|AC113434.34| Mus musculus strain C57BL/6J clone rp23-456n12 m...	40	5.3

---

>ref|XM_464147.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3121

 Score =  353 bits (178), Expect = 3e-94
 Identities = 307/350 (87%)
 Strand = Plus / Plus

                                                                       
Query: 42  aagaagtacatggctgacatactgtcggtgttggccttgacaatgtctgctgaaggcgaa 101
           |||| ||||||||| |||||  | || ||||| || ||||||||||| |||||||| |||
Sbjct: 418 aagaggtacatggccgacattttatcagtgttagctttgacaatgtccgctgaaggagaa 477

                                                                       
Query: 102 agggagagcctgaggtaccgtttgttgggctctgaaggtgacataggttcctggggtcat 161
           || || ||||| | ||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 478 agagaaagccttaagtaccgtttgttgggctctgaaggtgatatcggttcatggggtcat 537

                                                                       
Query: 162 gaatatgtcaggaatctggctggtgaaatcgctcaagaattccaaaagcgccagggtgat 221
           ||||| || || ||| |||| || ||||| || ||||||||||||||||| |||| ||||
Sbjct: 538 gaatacgtaagaaatttggcaggcgaaattgcacaagaattccaaaagcgtcaggatgat 597

                                                                       
Query: 222 gacatgccaattgacgagttaatggaactagtgcagcaaattgtctcattccacatgaag 281
           |||||||| |||||||   | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 598 gacatgccgattgacgctcttatggaactagtgcagcaaattgtttcattccatatgaag 657

                                                                       
Query: 282 cacaatgctgagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgcta 341
           || |||||||| |||||||| || ||||||||||||||||| ||||| ||||||||||||
Sbjct: 658 cataatgctgaacctgaagcagttgatcttctgatggaggtggaagatcttgatttgcta 717

                                                             
Query: 342 gttgagcatgttgactcaacaaactacaaaagaacttgtttgtaccttac 391
           ||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 718 gttgagcatgttgactctacgaactacaaaagaacttgcttgtaccttac 767

---

>ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.11
           mRNA
          Length = 3169

 Score =  353 bits (178), Expect = 3e-94
 Identities = 307/350 (87%)
 Strand = Plus / Plus

                                                                       
Query: 42  aagaagtacatggctgacatactgtcggtgttggccttgacaatgtctgctgaaggcgaa 101
           |||| ||||||||| |||||  | || ||||| || ||||||||||| |||||||| |||
Sbjct: 425 aagaggtacatggccgacattttatcagtgttagctttgacaatgtccgctgaaggagaa 484

                                                                       
Query: 102 agggagagcctgaggtaccgtttgttgggctctgaaggtgacataggttcctggggtcat 161
           || || ||||| | ||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 485 agagaaagccttaagtaccgtttgttgggctctgaaggtgatatcggttcatggggtcat 544

                                                                       
Query: 162 gaatatgtcaggaatctggctggtgaaatcgctcaagaattccaaaagcgccagggtgat 221
           ||||| || || ||| |||| || ||||| || ||||||||||||||||| |||| ||||
Sbjct: 545 gaatacgtaagaaatttggcaggcgaaattgcacaagaattccaaaagcgtcaggatgat 604

                                                                       
Query: 222 gacatgccaattgacgagttaatggaactagtgcagcaaattgtctcattccacatgaag 281
           |||||||| |||||||   | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 605 gacatgccgattgacgctcttatggaactagtgcagcaaattgtttcattccatatgaag 664

                                                                       
Query: 282 cacaatgctgagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgcta 341
           || |||||||| |||||||| || ||||||||||||||||| ||||| ||||||||||||
Sbjct: 665 cataatgctgaacctgaagcagttgatcttctgatggaggtggaagatcttgatttgcta 724

                                                             
Query: 342 gttgagcatgttgactcaacaaactacaaaagaacttgtttgtaccttac 391
           ||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 725 gttgagcatgttgactctacgaactacaaaagaacttgcttgtaccttac 774

---

>dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108C09, full
           insert sequence
          Length = 3120

 Score =  353 bits (178), Expect = 3e-94
 Identities = 307/350 (87%)
 Strand = Plus / Plus

                                                                       
Query: 42  aagaagtacatggctgacatactgtcggtgttggccttgacaatgtctgctgaaggcgaa 101
           |||| ||||||||| |||||  | || ||||| || ||||||||||| |||||||| |||
Sbjct: 417 aagaggtacatggccgacattttatcagtgttagctttgacaatgtccgctgaaggagaa 476

                                                                       
Query: 102 agggagagcctgaggtaccgtttgttgggctctgaaggtgacataggttcctggggtcat 161
           || || ||||| | ||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 477 agagaaagccttaagtaccgtttgttgggctctgaaggtgatatcggttcatggggtcat 536

                                                                       
Query: 162 gaatatgtcaggaatctggctggtgaaatcgctcaagaattccaaaagcgccagggtgat 221
           ||||| || || ||| |||| || ||||| || ||||||||||||||||| |||| ||||
Sbjct: 537 gaatacgtaagaaatttggcaggcgaaattgcacaagaattccaaaagcgtcaggatgat 596

                                                                       
Query: 222 gacatgccaattgacgagttaatggaactagtgcagcaaattgtctcattccacatgaag 281
           |||||||| |||||||   | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 597 gacatgccgattgacgctcttatggaactagtgcagcaaattgtttcattccatatgaag 656

                                                                       
Query: 282 cacaatgctgagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgcta 341
           || |||||||| |||||||| || ||||||||||||||||| ||||| ||||||||||||
Sbjct: 657 cataatgctgaacctgaagcagttgatcttctgatggaggtggaagatcttgatttgcta 716

                                                             
Query: 342 gttgagcatgttgactcaacaaactacaaaagaacttgtttgtaccttac 391
           ||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 717 gttgagcatgttgactctacgaactacaaaagaacttgcttgtaccttac 766

---

>dbj|AK119490.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-D03, full
           insert sequence
          Length = 1533

 Score =  353 bits (178), Expect = 3e-94
 Identities = 307/350 (87%)
 Strand = Plus / Plus

                                                                       
Query: 42  aagaagtacatggctgacatactgtcggtgttggccttgacaatgtctgctgaaggcgaa 101
           |||| ||||||||| |||||  | || ||||| || ||||||||||| |||||||| |||
Sbjct: 478 aagaggtacatggccgacattttatcagtgttagctttgacaatgtccgctgaaggagaa 537

                                                                       
Query: 102 agggagagcctgaggtaccgtttgttgggctctgaaggtgacataggttcctggggtcat 161
           || || ||||| | ||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 538 agagaaagccttaagtaccgtttgttgggctctgaaggtgatatcggttcatggggtcat 597

                                                                       
Query: 162 gaatatgtcaggaatctggctggtgaaatcgctcaagaattccaaaagcgccagggtgat 221
           ||||| || || ||| |||| || ||||| || ||||||||||||||||| |||| ||||
Sbjct: 598 gaatacgtaagaaatttggcaggcgaaattgcacaagaattccaaaagcgtcaggatgat 657

                                                                       
Query: 222 gacatgccaattgacgagttaatggaactagtgcagcaaattgtctcattccacatgaag 281
           |||||||| |||||||   | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 658 gacatgccgattgacgctcttatggaactagtgcagcaaattgtttcattccatatgaag 717

                                                                       
Query: 282 cacaatgctgagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgcta 341
           || |||||||| |||||||| || ||||||||||||||||| ||||| ||||||||||||
Sbjct: 718 cataatgctgaacctgaagcagttgatcttctgatggaggtggaagatcttgatttgcta 777

                                                             
Query: 342 gttgagcatgttgactcaacaaactacaaaagaacttgtttgtaccttac 391
           ||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 778 gttgagcatgttgactctacgaactacaaaagaacttgcttgtaccttac 827

---

>dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B03, full
           insert sequence
          Length = 3169

 Score =  353 bits (178), Expect = 3e-94
 Identities = 307/350 (87%)
 Strand = Plus / Plus

                                                                       
Query: 42  aagaagtacatggctgacatactgtcggtgttggccttgacaatgtctgctgaaggcgaa 101
           |||| ||||||||| |||||  | || ||||| || ||||||||||| |||||||| |||
Sbjct: 425 aagaggtacatggccgacattttatcagtgttagctttgacaatgtccgctgaaggagaa 484

                                                                       
Query: 102 agggagagcctgaggtaccgtttgttgggctctgaaggtgacataggttcctggggtcat 161
           || || ||||| | ||||||||||||||||||||||||||| || ||||| |||||||||
Sbjct: 485 agagaaagccttaagtaccgtttgttgggctctgaaggtgatatcggttcatggggtcat 544

                                                                       
Query: 162 gaatatgtcaggaatctggctggtgaaatcgctcaagaattccaaaagcgccagggtgat 221
           ||||| || || ||| |||| || ||||| || ||||||||||||||||| |||| ||||
Sbjct: 545 gaatacgtaagaaatttggcaggcgaaattgcacaagaattccaaaagcgtcaggatgat 604

                                                                       
Query: 222 gacatgccaattgacgagttaatggaactagtgcagcaaattgtctcattccacatgaag 281
           |||||||| |||||||   | ||||||||||||||||||||||| |||||||| ||||||
Sbjct: 605 gacatgccgattgacgctcttatggaactagtgcagcaaattgtttcattccatatgaag 664

                                                                       
Query: 282 cacaatgctgagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgcta 341
           || |||||||| |||||||| || ||||||||||||||||| ||||| ||||||||||||
Sbjct: 665 cataatgctgaacctgaagcagttgatcttctgatggaggtggaagatcttgatttgcta 724

                                                             
Query: 342 gttgagcatgttgactcaacaaactacaaaagaacttgtttgtaccttac 391
           ||||||||||||||||| || ||||||||||||||||| |||||||||||
Sbjct: 725 gttgagcatgttgactctacgaactacaaaagaacttgcttgtaccttac 774

---

>ref|XM_450542.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3092

 Score =  291 bits (147), Expect = 9e-76
 Identities = 315/371 (84%)
 Strand = Plus / Plus

                                                                       
Query: 24  atgccagaatctgagctaaagaagtacatggctgacatactgtcggtgttggccttgaca 83
           ||||||||||||||||| |||||||| |||||||| ||  |||| || |||||| |||||
Sbjct: 446 atgccagaatctgagctgaagaagtatatggctgatatcttgtcagtattggccctgaca 505

                                                                       
Query: 84  atgtctgctgaaggcgaaagggagagcctgaggtaccgtttgttgggctctgaaggtgac 143
           ||||| |||||||| ||||| |||||||| | ||||||  || | |||||||||||||||
Sbjct: 506 atgtccgctgaaggagaaagagagagcctcaagtaccgaatgataggctctgaaggtgac 565

                                                                       
Query: 144 ataggttcctggggtcatgaatatgtcaggaatctggctggtgaaatcgctcaagaattc 203
           || ||||| ||||||||||||||||| || ||  ||||||||||||| || || ||||||
Sbjct: 566 attggttcatggggtcatgaatatgtgagaaacttggctggtgaaattgcacaggaattc 625

                                                                       
Query: 204 caaaagcgccagggtgatgacatgccaattgacgagttaatggaactagtgcagcaaatt 263
           || |||||||||| ||||| |||| ||| |||     | | |||||| ||| ||||||||
Sbjct: 626 cagaagcgccaggatgatggcatgacaactgattccctgaaggaactggtggagcaaatt 685

                                                                       
Query: 264 gtctcattccacatgaagcacaatgctgagcctgaagctgtagatcttctgatggaggtt 323
           || ||||||||||||||||| |||||||| ||||||||||| ||||| || |||||||| 
Sbjct: 686 gtttcattccacatgaagcataatgctgaacctgaagctgtggatctcctaatggaggtc 745

                                                                       
Query: 324 gaagaccttgatttgctagttgagcatgttgactcaacaaactacaaaagaacttgtttg 383
           ||| | ||||||||||||||| |||| |||||||| |||||||||||||| || || |||
Sbjct: 746 gaaaagcttgatttgctagttaagcacgttgactccacaaactacaaaaggacctgcttg 805

                      
Query: 384 taccttactag 394
           ||||| |||||
Sbjct: 806 tacctcactag 816

---

>dbj|AK071400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J12, full
           insert sequence
          Length = 3091

 Score =  291 bits (147), Expect = 9e-76
 Identities = 315/371 (84%)
 Strand = Plus / Plus

                                                                       
Query: 24  atgccagaatctgagctaaagaagtacatggctgacatactgtcggtgttggccttgaca 83
           ||||||||||||||||| |||||||| |||||||| ||  |||| || |||||| |||||
Sbjct: 445 atgccagaatctgagctgaagaagtatatggctgatatcttgtcagtattggccctgaca 504

                                                                       
Query: 84  atgtctgctgaaggcgaaagggagagcctgaggtaccgtttgttgggctctgaaggtgac 143
           ||||| |||||||| ||||| |||||||| | ||||||  || | |||||||||||||||
Sbjct: 505 atgtccgctgaaggagaaagagagagcctcaagtaccgaatgataggctctgaaggtgac 564

                                                                       
Query: 144 ataggttcctggggtcatgaatatgtcaggaatctggctggtgaaatcgctcaagaattc 203
           || ||||| ||||||||||||||||| || ||  ||||||||||||| || || ||||||
Sbjct: 565 attggttcatggggtcatgaatatgtgagaaacttggctggtgaaattgcacaggaattc 624

                                                                       
Query: 204 caaaagcgccagggtgatgacatgccaattgacgagttaatggaactagtgcagcaaatt 263
           || |||||||||| ||||| |||| ||| |||     | | |||||| ||| ||||||||
Sbjct: 625 cagaagcgccaggatgatggcatgacaactgattccctgaaggaactggtggagcaaatt 684

                                                                       
Query: 264 gtctcattccacatgaagcacaatgctgagcctgaagctgtagatcttctgatggaggtt 323
           || ||||||||||||||||| |||||||| ||||||||||| ||||| || |||||||| 
Sbjct: 685 gtttcattccacatgaagcataatgctgaacctgaagctgtggatctcctaatggaggtc 744

                                                                       
Query: 324 gaagaccttgatttgctagttgagcatgttgactcaacaaactacaaaagaacttgtttg 383
           ||| | ||||||||||||||| |||| |||||||| |||||||||||||| || || |||
Sbjct: 745 gaaaagcttgatttgctagttaagcacgttgactccacaaactacaaaaggacctgcttg 804

                      
Query: 384 taccttactag 394
           ||||| |||||
Sbjct: 805 tacctcactag 815

---

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  105 bits (53), Expect = 1e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                           
Query: 319     aggttgaagaccttgatttgctagttgagcatgttgactcaacaaactacaaaagaactt 378
               |||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 2566373 aggtggaagatcttgatttgctagttgagcatgttgactctacgaactacaaaagaactt 2566432

                            
Query: 379     gtttgtaccttac 391
               | |||||||||||
Sbjct: 2566433 gcttgtaccttac 2566445



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                  
Query: 116     gtaccgtttgttgggctctgaaggtgacataggttcctggggtcatgaata 166
               ||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 2564773 gtaccgtttgttgggctctgaaggtgatatcggttcatggggtcatgaata 2564823



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                           
Query: 213     cagggtgatgacatgccaattgacgagttaatggaactagtgcagcaaattgtctcattc 272
               |||| |||||||||||| |||||||   | ||||||||||||||||||||||| ||||||
Sbjct: 2566023 caggatgatgacatgccgattgacgctcttatggaactagtgcagcaaattgtttcattc 2566082

                        
Query: 273     cacatgaag 281
               || ||||||
Sbjct: 2566083 catatgaag 2566091



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                          
Query: 280     agcacaatgctgagcctgaagctgtagatcttctgatggaggt 322
               |||| |||||||| |||||||| || |||||||||||||||||
Sbjct: 2566235 agcataatgctgaacctgaagcagttgatcttctgatggaggt 2566277



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                        
Query: 47      gtacatggctgacatactgtcggtgttggccttgacaatgtctgctgaaggcgaaag 103
               ||||||||| |||||  | || ||||| || ||||||||||| |||||||| |||||
Sbjct: 2564594 gtacatggccgacattttatcagtgttagctttgacaatgtccgctgaaggagaaag 2564650

---

>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_C03
          Length = 103297

 Score =  105 bits (53), Expect = 1e-19
 Identities = 68/73 (93%)
 Strand = Plus / Plus

                                                                         
Query: 319   aggttgaagaccttgatttgctagttgagcatgttgactcaacaaactacaaaagaactt 378
             |||| ||||| ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 45156 aggtggaagatcttgatttgctagttgagcatgttgactctacgaactacaaaagaactt 45215

                          
Query: 379   gtttgtaccttac 391
             | |||||||||||
Sbjct: 45216 gcttgtaccttac 45228



 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 48/51 (94%)
 Strand = Plus / Plus

                                                                
Query: 116   gtaccgtttgttgggctctgaaggtgacataggttcctggggtcatgaata 166
             ||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 43556 gtaccgtttgttgggctctgaaggtgatatcggttcatggggtcatgaata 43606



 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 61/69 (88%)
 Strand = Plus / Plus

                                                                         
Query: 213   cagggtgatgacatgccaattgacgagttaatggaactagtgcagcaaattgtctcattc 272
             |||| |||||||||||| |||||||   | ||||||||||||||||||||||| ||||||
Sbjct: 44806 caggatgatgacatgccgattgacgctcttatggaactagtgcagcaaattgtttcattc 44865

                      
Query: 273   cacatgaag 281
             || ||||||
Sbjct: 44866 catatgaag 44874



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 280   agcacaatgctgagcctgaagctgtagatcttctgatggaggt 322
             |||| |||||||| |||||||| || |||||||||||||||||
Sbjct: 45018 agcataatgctgaacctgaagcagttgatcttctgatggaggt 45060



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 47    gtacatggctgacatactgtcggtgttggccttgacaatgtctgctgaaggcgaaag 103
             ||||||||| |||||  | || ||||| || ||||||||||| |||||||| |||||
Sbjct: 43377 gtacatggccgacattttatcagtgttagctttgacaatgtccgctgaaggagaaag 43433

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                           
Query: 330     cttgatttgctagttgagcatgttgactcaacaaactacaaaagaacttgtttgtacctt 389
               ||||||||||||||| |||| |||||||| |||||||||||||| || || |||||||| 
Sbjct: 9570536 cttgatttgctagttaagcacgttgactccacaaactacaaaaggacctgcttgtacctc 9570595

                    
Query: 390     actag 394
               |||||
Sbjct: 9570596 actag 9570600



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                           
Query: 104     ggagagcctgaggtaccgtttgttgggctctgaaggtgacataggttcctggggtcatga 163
               ||||||||| | ||||||  || | ||||||||||||||||| ||||| |||||||||||
Sbjct: 9569021 ggagagcctcaagtaccgaatgataggctctgaaggtgacattggttcatggggtcatga 9569080

                     
Query: 164     atatgt 169
               ||||||
Sbjct: 9569081 atatgt 9569086



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 245     ggaactagtgcagcaaattgtctcattccacatgaag 281
               |||||| ||| |||||||||| |||||||||||||||
Sbjct: 9570181 ggaactggtggagcaaattgtttcattccacatgaag 9570217



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                          
Query: 280     agcacaatgctgagcctgaagctgtagatcttctgatggaggt 322
               |||| |||||||| ||||||||||| ||||| || ||||||||
Sbjct: 9570370 agcataatgctgaacctgaagctgtggatctcctaatggaggt 9570412



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                      
Query: 178     tggctggtgaaatcgctcaagaattccaaaagcgccagg 216
               ||||||||||||| || || |||||||| ||||||||||
Sbjct: 9569629 tggctggtgaaattgcacaggaattccagaagcgccagg 9569667

---

>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0706E03
          Length = 188028

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                         
Query: 330   cttgatttgctagttgagcatgttgactcaacaaactacaaaagaacttgtttgtacctt 389
             ||||||||||||||| |||| |||||||| |||||||||||||| || || |||||||| 
Sbjct: 10633 cttgatttgctagttaagcacgttgactccacaaactacaaaaggacctgcttgtacctc 10692

                  
Query: 390   actag 394
             |||||
Sbjct: 10693 actag 10697



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                        
Query: 104  ggagagcctgaggtaccgtttgttgggctctgaaggtgacataggttcctggggtcatga 163
            ||||||||| | ||||||  || | ||||||||||||||||| ||||| |||||||||||
Sbjct: 9118 ggagagcctcaagtaccgaatgataggctctgaaggtgacattggttcatggggtcatga 9177

                  
Query: 164  atatgt 169
            ||||||
Sbjct: 9178 atatgt 9183



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                  
Query: 245   ggaactagtgcagcaaattgtctcattccacatgaag 281
             |||||| ||| |||||||||| |||||||||||||||
Sbjct: 10278 ggaactggtggagcaaattgtttcattccacatgaag 10314



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 280   agcacaatgctgagcctgaagctgtagatcttctgatggaggt 322
             |||| |||||||| ||||||||||| ||||| || ||||||||
Sbjct: 10467 agcataatgctgaacctgaagctgtggatctcctaatggaggt 10509



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 178  tggctggtgaaatcgctcaagaattccaaaagcgccagg 216
            ||||||||||||| || || |||||||| ||||||||||
Sbjct: 9726 tggctggtgaaattgcacaggaattccagaagcgccagg 9764

---

>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0692F07
          Length = 141544

 Score = 73.8 bits (37), Expect = 4e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                          
Query: 330    cttgatttgctagttgagcatgttgactcaacaaactacaaaagaacttgtttgtacctt 389
              ||||||||||||||| |||| |||||||| |||||||||||||| || || |||||||| 
Sbjct: 134172 cttgatttgctagttaagcacgttgactccacaaactacaaaaggacctgcttgtacctc 134231

                   
Query: 390    actag 394
              |||||
Sbjct: 134232 actag 134236



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 58/66 (87%)
 Strand = Plus / Plus

                                                                          
Query: 104    ggagagcctgaggtaccgtttgttgggctctgaaggtgacataggttcctggggtcatga 163
              ||||||||| | ||||||  || | ||||||||||||||||| ||||| |||||||||||
Sbjct: 132657 ggagagcctcaagtaccgaatgataggctctgaaggtgacattggttcatggggtcatga 132716

                    
Query: 164    atatgt 169
              ||||||
Sbjct: 132717 atatgt 132722



 Score = 50.1 bits (25), Expect = 0.005
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                   
Query: 245    ggaactagtgcagcaaattgtctcattccacatgaag 281
              |||||| ||| |||||||||| |||||||||||||||
Sbjct: 133817 ggaactggtggagcaaattgtttcattccacatgaag 133853



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                         
Query: 280    agcacaatgctgagcctgaagctgtagatcttctgatggaggt 322
              |||| |||||||| ||||||||||| ||||| || ||||||||
Sbjct: 134006 agcataatgctgaacctgaagctgtggatctcctaatggaggt 134048



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 178    tggctggtgaaatcgctcaagaattccaaaagcgccagg 216
              ||||||||||||| || || |||||||| ||||||||||
Sbjct: 133265 tggctggtgaaattgcacaggaattccagaagcgccagg 133303

---

>ref|NM_118989.2| Arabidopsis thaliana unknown protein AT4G28470 mRNA, complete cds
          Length = 3068

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 103/126 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaagcacaatgct 290
           ||||| || |||||||| || |||||||||||||| || || ||||||||||| ||||| 
Sbjct: 712 attgaagacttaatggatcttgtgcagcaaattgtttcttttcacatgaagcataatgcc 771

                                                                       
Query: 291 gagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgctagttgagcat 350
           ||  | |||||||| || ||| | ||||| ||||| || |||||| |  || ||||||||
Sbjct: 772 gaaaccgaagctgttgaccttttaatggatgttgaggatcttgatctcttacttgagcat 831

                 
Query: 351 gttgac 356
           ||||||
Sbjct: 832 gttgac 837



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 139 gtgacataggttcctggggtcatgaatatgtcaggaatctggctgg 184
           ||||||| || || |||||||| || |||||||||||| |||||||
Sbjct: 620 gtgacatcggatcgtggggtcacgagtatgtcaggaatttggctgg 665



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 79  tgacaatgtctgctgaaggcgaaaggga 106
           |||| |||||||||||||| ||||||||
Sbjct: 560 tgaccatgtctgctgaaggtgaaaggga 587

---

>gb|AY230829.1| Arabidopsis thaliana 26S proteasome subunit RPN1b (RPN1b) mRNA,
           complete cds
          Length = 2959

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 103/126 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaagcacaatgct 290
           ||||| || |||||||| || |||||||||||||| || || ||||||||||| ||||| 
Sbjct: 585 attgaagacttaatggatcttgtgcagcaaattgtttcttttcacatgaagcataatgcc 644

                                                                       
Query: 291 gagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgctagttgagcat 350
           ||  | |||||||| || ||| | ||||| ||||| || |||||| |  || ||||||||
Sbjct: 645 gaaaccgaagctgttgaccttttaatggatgttgaggatcttgatctcttacttgagcat 704

                 
Query: 351 gttgac 356
           ||||||
Sbjct: 705 gttgac 710



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 139 gtgacataggttcctggggtcatgaatatgtcaggaatctggctgg 184
           ||||||| || || |||||||| || |||||||||||| |||||||
Sbjct: 493 gtgacatcggatcgtggggtcacgagtatgtcaggaatttggctgg 538



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 79  tgacaatgtctgctgaaggcgaaaggga 106
           |||| |||||||||||||| ||||||||
Sbjct: 433 tgaccatgtctgctgaaggtgaaaggga 460

---

>gb|AY069881.1| Arabidopsis thaliana AT4g28470/F20O9_150 mRNA sequence
          Length = 3032

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 103/126 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaagcacaatgct 290
           ||||| || |||||||| || |||||||||||||| || || ||||||||||| ||||| 
Sbjct: 712 attgaagacttaatggatcttgtgcagcaaattgtttcttttcacatgaagcataatgcc 771

                                                                       
Query: 291 gagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgctagttgagcat 350
           ||  | |||||||| || ||| | ||||| ||||| || |||||| |  || ||||||||
Sbjct: 772 gaaaccgaagctgttgaccttttaatggatgttgaggatcttgatctcttacttgagcat 831

                 
Query: 351 gttgac 356
           ||||||
Sbjct: 832 gttgac 837



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Plus

                                                         
Query: 139 gtgacataggttcctggggtcatgaatatgtcaggaatctggctgg 184
           ||||||| || || |||||||| || |||||||||||| |||||||
Sbjct: 620 gtgacatcggatcgtggggtcacgagtatgtcaggaatttggctgg 665



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 79  tgacaatgtctgctgaaggcgaaaggga 106
           |||| |||||||||||||| ||||||||
Sbjct: 560 tgaccatgtctgctgaaggtgaaaggga 587

---

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                         
Query: 129      ggctctgaaggtgacataggttcctggggtcatgaatatgt 169
                ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 28914012 ggctctgaaggtgacattggttcatggggtcatgaatatgt 28913972



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                            
Query: 330      cttgatttgctagttgagcatgttgactcaacaaactacaaaagaacttgtttgtacctt 389
                ||||||||||||||| |||| |||||||| || ||||||||||| || || |||||||| 
Sbjct: 28912506 cttgatttgctagttaagcacgttgactccacgaactacaaaaggacctgcttgtacctc 28912447

                     
Query: 390      actag 394
                |||||
Sbjct: 28912446 actag 28912442



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                           
Query: 280      agcacaatgctgagcctgaagctgtagatcttctgatggaggt 322
                |||| |||||||| ||||||||||| |||||||| ||||||||
Sbjct: 28912671 agcataatgctgaacctgaagctgtggatcttctaatggaggt 28912629



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                       
Query: 178      tggctggtgaaatcgctcaagaattccaaaagcgccagg 216
                ||||||||||||| || || |||||||| ||||||||||
Sbjct: 28913638 tggctggtgaaattgcacaggaattccagaagcgccagg 28913600



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                     
Query: 245      ggaactagtgcagcaaattgtctcattccacatgaag 281
                |||||| ||| ||||||| || |||||||||||||||
Sbjct: 28913097 ggaactggtggagcaaatcgtttcattccacatgaag 28913061

---

>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468G03
          Length = 143918

 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                      
Query: 129   ggctctgaaggtgacataggttcctggggtcatgaatatgt 169
             ||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 64056 ggctctgaaggtgacattggttcatggggtcatgaatatgt 64016



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                         
Query: 330   cttgatttgctagttgagcatgttgactcaacaaactacaaaagaacttgtttgtacctt 389
             ||||||||||||||| |||| |||||||| || ||||||||||| || || |||||||| 
Sbjct: 62550 cttgatttgctagttaagcacgttgactccacgaactacaaaaggacctgcttgtacctc 62491

                  
Query: 390   actag 394
             |||||
Sbjct: 62490 actag 62486



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                        
Query: 280   agcacaatgctgagcctgaagctgtagatcttctgatggaggt 322
             |||| |||||||| ||||||||||| |||||||| ||||||||
Sbjct: 62715 agcataatgctgaacctgaagctgtggatcttctaatggaggt 62673



 Score = 46.1 bits (23), Expect = 0.085
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 178   tggctggtgaaatcgctcaagaattccaaaagcgccagg 216
             ||||||||||||| || || |||||||| ||||||||||
Sbjct: 63682 tggctggtgaaattgcacaggaattccagaagcgccagg 63644



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                  
Query: 245   ggaactagtgcagcaaattgtctcattccacatgaag 281
             |||||| ||| ||||||| || |||||||||||||||
Sbjct: 63141 ggaactggtggagcaaatcgtttcattccacatgaag 63105

---

>ref|NM_127618.2| Arabidopsis thaliana unknown protein AT2G20580 mRNA, complete cds
          Length = 3043

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaagcacaatgct 290
           |||||||| |||||||| || ||||| ||||||||  | || ||||||||||| ||||| 
Sbjct: 727 attgacgatttaatggagcttgtgcaacaaattgttgcttttcacatgaagcataatgca 786

                                                                       
Query: 291 gagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgctagttgagcat 350
           ||  | |||||||| |||||| | ||||| ||||| || |||||| |  || ||||||||
Sbjct: 787 gaaaccgaagctgttgatcttttaatggatgttgaggatcttgatctcttacttgagcat 846

             
Query: 351 gt 352
           ||
Sbjct: 847 gt 848



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 138 ggtgacataggttcctggggtcatgaatatgtcaggaat 176
           |||||||| || || ||||||||||||||||||||||||
Sbjct: 634 ggtgacattggatcgtggggtcatgaatatgtcaggaat 672

---

>gb|AY230828.1| Arabidopsis thaliana 26S proteasome subunit RPN1a (RPN1a) mRNA,
           complete cds
          Length = 2891

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaagcacaatgct 290
           |||||||| |||||||| || ||||| ||||||||  | || ||||||||||| ||||| 
Sbjct: 610 attgacgatttaatggagcttgtgcaacaaattgttgcttttcacatgaagcataatgca 669

                                                                       
Query: 291 gagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgctagttgagcat 350
           ||  | |||||||| |||||| | ||||| ||||| || |||||| |  || ||||||||
Sbjct: 670 gaaaccgaagctgttgatcttttaatggatgttgaggatcttgatctcttacttgagcat 729

             
Query: 351 gt 352
           ||
Sbjct: 730 gt 731



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 138 ggtgacataggttcctggggtcatgaatatgtcaggaat 176
           |||||||| || || ||||||||||||||||||||||||
Sbjct: 517 ggtgacattggatcgtggggtcatgaatatgtcaggaat 555

---

>gb|BT012021.1| Arabidopsis thaliana At4g08140 mRNA sequence
          Length = 649

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaagcacaatgct 290
           |||||||| |||||||| || ||||| ||||||||  | || ||||||||||| ||||| 
Sbjct: 358 attgacgatttaatggagcttgtgcaacaaattgttgcttttcacatgaagcataatgca 417

                                                                       
Query: 291 gagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgctagttgagcat 350
           ||  | |||||||| |||||| | ||||| ||||| || |||||| |  || ||||||||
Sbjct: 418 gaaaccgaagctgttgatcttttaatggatgttgaggatcttgatctcttacttgagcat 477

             
Query: 351 gt 352
           ||
Sbjct: 478 gt 479



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 138 ggtgacataggttcctggggtcatgaatatgtcaggaat 176
           |||||||| || || ||||||||||||||||||||||||
Sbjct: 265 ggtgacattggatcgtggggtcatgaatatgtcaggaat 303

---

>gb|AY040061.1| Arabidopsis thaliana putative 26S proteasome regulatory subunit S2
           (At2g20580) mRNA, complete cds
          Length = 2676

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaagcacaatgct 290
           |||||||| |||||||| || ||||| ||||||||  | || ||||||||||| ||||| 
Sbjct: 526 attgacgatttaatggagcttgtgcaacaaattgttgcttttcacatgaagcataatgca 585

                                                                       
Query: 291 gagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgctagttgagcat 350
           ||  | |||||||| |||||| | ||||| ||||| || |||||| |  || ||||||||
Sbjct: 586 gaaaccgaagctgttgatcttttaatggatgttgaggatcttgatctcttacttgagcat 645

             
Query: 351 gt 352
           ||
Sbjct: 646 gt 647



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 138 ggtgacataggttcctggggtcatgaatatgtcaggaat 176
           |||||||| || || ||||||||||||||||||||||||
Sbjct: 433 ggtgacattggatcgtggggtcatgaatatgtcaggaat 471

---

>gb|AF360216.1| Arabidopsis thaliana putative 26S proteasome regulatory subunit S2
           (At2g20580) mRNA, complete cds
          Length = 3041

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 99/122 (81%)
 Strand = Plus / Plus

                                                                       
Query: 231 attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaagcacaatgct 290
           |||||||| |||||||| || ||||| ||||||||  | || ||||||||||| ||||| 
Sbjct: 727 attgacgatttaatggagcttgtgcaacaaattgttgcttttcacatgaagcataatgca 786

                                                                       
Query: 291 gagcctgaagctgtagatcttctgatggaggttgaagaccttgatttgctagttgagcat 350
           ||  | |||||||| |||||| | ||||| ||||| || |||||| |  || ||||||||
Sbjct: 787 gaaaccgaagctgttgatcttttaatggatgttgaggatcttgatctcttacttgagcat 846

             
Query: 351 gt 352
           ||
Sbjct: 847 gt 848



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                  
Query: 138 ggtgacataggttcctggggtcatgaatatgtcaggaat 176
           |||||||| || || ||||||||||||||||||||||||
Sbjct: 634 ggtgacattggatcgtggggtcatgaatatgtcaggaat 672

---

>gb|AC007048.5| Arabidopsis thaliana chromosome 2 clone F23N11 map mi148, complete
             sequence
          Length = 61384

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                    
Query: 138   ggtgacataggttcctggggtcatgaatatgtcaggaat 176
             |||||||| || || ||||||||||||||||||||||||
Sbjct: 54912 ggtgacattggatcgtggggtcatgaatatgtcaggaat 54874

---

>gb|AC151527.13| Medicago truncatula clone mth2-135i19, complete sequence
          Length = 132470

 Score = 48.1 bits (24), Expect = 0.022
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                 
Query: 43    agaagtacatggctgacatactgtcggtgttggccttgacaatgtctgctga 94
             |||||||  ||||||||||| | ||||| |||||| | ||||||||||||||
Sbjct: 88179 agaagtatttggctgacatattatcggtattggcccttacaatgtctgctga 88128

---

>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68
          Length = 199749

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                 
Query: 231    attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaag 281
              ||||| || |||||||| || |||||||||||||| || || |||||||||
Sbjct: 186383 attgaagacttaatggatcttgtgcagcaaattgtttcttttcacatgaag 186333



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                            
Query: 139    gtgacataggttcctggggtcatgaatatgtcaggaatctggctgg 184
              ||||||| || || |||||||| || |||||||||||| |||||||
Sbjct: 186632 gtgacatcggatcgtggggtcacgagtatgtcaggaatttggctgg 186587

---

>emb|AL021749.1|ATF20O9 Arabidopsis thaliana DNA chromosome 4, BAC clone F20O9 (ESSA project)
          Length = 93695

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                                
Query: 231   attgacgagttaatggaactagtgcagcaaattgtctcattccacatgaag 281
             ||||| || |||||||| || |||||||||||||| || || |||||||||
Sbjct: 48466 attgaagacttaatggatcttgtgcagcaaattgtttcttttcacatgaag 48416



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 40/46 (86%)
 Strand = Plus / Minus

                                                           
Query: 139   gtgacataggttcctggggtcatgaatatgtcaggaatctggctgg 184
             ||||||| || || |||||||| || |||||||||||| |||||||
Sbjct: 48715 gtgacatcggatcgtggggtcacgagtatgtcaggaatttggctgg 48670

---

>gb|AC080009.13| Homo sapiens 3q BAC RP11-460M17 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 163469

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 354   gactcaacaaactacaaaagaac 376
             |||||||||||||||||||||||
Sbjct: 14811 gactcaacaaactacaaaagaac 14833

---

>emb|AL591771.1|CNS07EGO Human chromosome 14 DNA sequence BAC R-727C22 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 154205

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 225    atgccaattgacgagttaatgg 246
              ||||||||||||||||||||||
Sbjct: 137503 atgccaattgacgagttaatgg 137524

---

>gb|AC168222.2| Mus musculus BAC clone CH25-395E5 from chromosome 10, complete sequence
          Length = 96290

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 153   tggggtcatgaatatgtcagg 173
             |||||||||||||||||||||
Sbjct: 58779 tggggtcatgaatatgtcagg 58759

---

>gb|AC079356.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0016H04,
             complete sequence
          Length = 176678

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 328   accttgatttgctagttgagc 348
             |||||||||||||||||||||
Sbjct: 89517 accttgatttgctagttgagc 89537

---

>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete
             sequence
          Length = 115815

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 321   gttgaagaccttgatttgctagttg 345
             |||||||| ||||||||||||||||
Sbjct: 68858 gttgaagaacttgatttgctagttg 68882

---

>gb|BC007897.2| Homo sapiens proteasome (prosome, macropain) 26S subunit,
           non-ATPase, 2, mRNA (cDNA clone MGC:14274
           IMAGE:4131391), complete cds
          Length = 2957

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 460 tggggtcatgagtatgtcaggcatctggc 488

---

>ref|NM_002808.3| Homo sapiens proteasome (prosome, macropain) 26S subunit,
           non-ATPase, 2 (PSMD2), mRNA
          Length = 2990

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 493 tggggtcatgagtatgtcaggcatctggc 521

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 321      gttgaagaccttgatttgctagttg 345
                |||||||| ||||||||||||||||
Sbjct: 17823257 gttgaagaacttgatttgctagttg 17823233

---

>ref|XM_805570.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053508567.100) partial mRNA
          Length = 4218

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 33   tctgagctaaagaagtacatggctgacat 61
            |||||||| ||||||||||||||| ||||
Sbjct: 2227 tctgagctcaagaagtacatggcttacat 2255

---

>gb|BT009736.1| Homo sapiens proteasome (prosome, macropain) 26S subunit,
           non-ATPase, 2 mRNA, complete cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 460 tggggtcatgagtatgtcaggcatctggc 488

---

>gb|BT009735.1| Synthetic construct Homo sapiens proteasome (prosome, macropain)
           26S subunit, non-ATPase, 2 mRNA, partial cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 460 tggggtcatgagtatgtcaggcatctggc 488

---

>emb|AL162014.1|HSM802541 Homo sapiens mRNA; cDNA DKFZp564A2282 (from clone DKFZp564A2282)
          Length = 1942

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 492 tggggtcatgagtatgtcaggcatctggc 520

---

>emb|CR859401.1| Pongo pygmaeus mRNA; cDNA DKFZp459L0427 (from clone DKFZp459L0427)
          Length = 2926

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 487 tggggtcatgagtatgtcaggcatctggc 515

---

>emb|CR859332.1| Pongo pygmaeus mRNA; cDNA DKFZp459I0428 (from clone DKFZp459I0428)
          Length = 2926

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 487 tggggtcatgagtatgtcaggcatctggc 515

---

>emb|CR620212.1| full-length cDNA clone CS0DK010YG02 of HeLa cells Cot 25-normalized
           of Homo sapiens (human)
          Length = 2852

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 455 tggggtcatgagtatgtcaggcatctggc 483

---

>dbj|AK095245.1| Homo sapiens cDNA FLJ37926 fis, clone CTONG2000977, highly similar to
            26S PROTEASOME REGULATORY SUBUNIT S2
          Length = 3447

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 153  tggggtcatgaatatgtcaggaatctggc 181
            ||||||||||| ||||||||| |||||||
Sbjct: 1020 tggggtcatgagtatgtcaggcatctggc 1048

---

>dbj|AB169862.1| Macaca fascicularis brain cDNA, clone: QccE-18534, similar to human
           proteasome (prosome, macropain) 26S subunit,
           non-ATPase,2 (PSMD2), mRNA, RefSeq: NM_002808.3
          Length = 2925

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 477 tggggtcatgagtatgtcaggcatctggc 505

---

>dbj|AB168509.1| Macaca fascicularis testis cDNA clone: QtsA-12648, similar to human
           proteasome (prosome, macropain) 26S subunit,
           non-ATPase,2 (PSMD2), mRNA, RefSeq: NM_002808.3
          Length = 2049

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 78  tggggtcatgagtatgtcaggcatctggc 106

---

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 328    accttgatttgctagttgagc 348
              |||||||||||||||||||||
Sbjct: 572118 accttgatttgctagttgagc 572138

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 321      gttgaagaccttgatttgctagttg 345
                |||||||| ||||||||||||||||
Sbjct: 17816798 gttgaagaacttgatttgctagttg 17816774

---

>gb|BC056516.1| Danio rerio proteasome (prosome, macropain) 26S subunit,
           non-ATPase, 2, mRNA (cDNA clone MGC:65921
           IMAGE:6789432), complete cds
          Length = 3090

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 150 tcctggggtcatgaatatgtcaggaatct 178
           |||||||| ||||||||||||||| ||||
Sbjct: 468 tcctggggacatgaatatgtcaggcatct 496

---

>ref|NM_200546.1| Danio rerio proteasome (prosome, macropain) 26S subunit,
           non-ATPase, 2 (psmd2), mRNA
          Length = 3090

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 150 tcctggggtcatgaatatgtcaggaatct 178
           |||||||| ||||||||||||||| ||||
Sbjct: 468 tcctggggacatgaatatgtcaggcatct 496

---

>gb|AY892426.1| Synthetic construct Homo sapiens clone FLH022847.01L proteasome 26S
           subunit 2 (PSMD2) mRNA, partial cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 460 tggggtcatgagtatgtcaggcatctggc 488

---

>gb|AY892425.1| Synthetic construct Homo sapiens clone FLH022846.01L proteasome 26S
           subunit 2 (PSMD2) mRNA, partial cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 460 tggggtcatgagtatgtcaggcatctggc 488

---

>gb|AY889948.1| Synthetic construct Homo sapiens clone FLH022851.01X proteasome 26S
           subunit 2 (PSMD2) mRNA, complete cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 460 tggggtcatgagtatgtcaggcatctggc 488

---

>gb|AY889947.1| Synthetic construct Homo sapiens clone FLH022850.01X proteasome 26S
           subunit 2 (PSMD2) mRNA, complete cds
          Length = 2727

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 460 tggggtcatgagtatgtcaggcatctggc 488

---

>dbj|AK119372.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-132-A02, full
            insert sequence
          Length = 3038

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 321  gttgaagaccttgatttgctagttg 345
            |||||||| ||||||||||||||||
Sbjct: 2523 gttgaagaacttgatttgctagttg 2499

---

>gb|BC002368.2| Homo sapiens proteasome (prosome, macropain) 26S subunit,
           non-ATPase, 2, mRNA (cDNA clone MGC:8500 IMAGE:2822191),
           complete cds
          Length = 2917

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 461 tggggtcatgagtatgtcaggcatctggc 489

---

>gb|BC002997.1| Homo sapiens proteasome (prosome, macropain) 26S subunit,
           non-ATPase, 2, mRNA (cDNA clone MGC:3871 IMAGE:2905429),
           complete cds
          Length = 2928

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 482 tggggtcatgagtatgtcaggcatctggc 510

---

>dbj|AB209843.1| Homo sapiens mRNA for proteasome 26S non-ATPase subunit 2 variant
           protein
          Length = 2900

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 475 tggggtcatgagtatgtcaggcatctggc 503

---

>gb|U12596.1|HSU12596 Human tumor necrosis factor type 1 receptor associated protein
           (TRAP2) mRNA, complete cds
          Length = 2828

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 401 tggggtcatgagtatgtcaggcatctggc 429

---

>emb|X86446.1|HSRNA5511 H.sapiens mRNA for 55.11 binding protein
          Length = 2863

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 433 tggggtcatgagtatgtcaggcatctggc 461

---

>dbj|D78151.1|HUM26SPSP Human mRNA for 26S proteasome subunit p97, complete cds
          Length = 2922

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 153 tggggtcatgaatatgtcaggaatctggc 181
           ||||||||||| ||||||||| |||||||
Sbjct: 493 tggggtcatgagtatgtcaggcatctggc 521

---

>gb|AC124178.3| Mus musculus BAC clone RP23-193J15 from 18, complete sequence
          Length = 206833

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 272    ccacatgaagcacaatgctgagcc 295
              |||||||||||||| |||||||||
Sbjct: 186448 ccacatgaagcacactgctgagcc 186471

---

>gb|AC110538.6| Mus musculus chromosome 5, clone RP23-71L23, complete sequence
          Length = 205923

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    acataggttcctggggtcat 161
              ||||||||||||||||||||
Sbjct: 107864 acataggttcctggggtcat 107883

---

>gb|AC144645.17| Medicago truncatula clone mth2-11e15, complete sequence
          Length = 124394

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   gaactagtgcagcaaattgt 265
             ||||||||||||||||||||
Sbjct: 83607 gaactagtgcagcaaattgt 83626

---

>emb|AL451140.15| Human DNA sequence from clone RP11-540H22 on chromosome 9 Contains the
             5' end of a novel gene and the 3' end of a novel gene,
             complete sequence
          Length = 187738

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 239   gttaatggaactagtgcagcaaat 262
             ||||||||||||||||||| ||||
Sbjct: 40844 gttaatggaactagtgcagaaaat 40821

---

>emb|AL159999.15| Human DNA sequence from clone RP11-8I8 on chromosome 9 Contains a
             phosphoribosylaminoimidazole carboxylase (PAICS)
             pseudogene and the 3' end of one variant of the ROR2 gene
             for receptor tyrosine kinase-like orphan receptor 2,
             complete sequence
          Length = 99959

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 272   ccacatgaagcacaatgctg 291
             ||||||||||||||||||||
Sbjct: 45165 ccacatgaagcacaatgctg 45184

---

>gb|AC158754.4| Mus musculus chromosome 5, clone RP24-167K16, complete sequence
          Length = 131339

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 142    acataggttcctggggtcat 161
              ||||||||||||||||||||
Sbjct: 126425 acataggttcctggggtcat 126406

---

>emb|AL161581.2|ATCHRIV77 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 77
          Length = 197252

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 363    aactacaaaagaacttgttt 382
              ||||||||||||||||||||
Sbjct: 116099 aactacaaaagaacttgttt 116118

---

>emb|AL050398.1|ATL23H3 Arabidopsis thaliana DNA chromosome 4, cosmid clone L23H3 (ESSA
             project)
          Length = 36270

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 363   aactacaaaagaacttgttt 382
             ||||||||||||||||||||
Sbjct: 17930 aactacaaaagaacttgttt 17949

---

>gb|BC098489.1| Mus musculus synuclein, alpha interacting protein (synphilin), mRNA
            (cDNA clone MGC:107459 IMAGE:30096466), complete cds
          Length = 3593

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 272  ccacatgaagcacaatgctgagcc 295
            |||||||||||||| |||||||||
Sbjct: 2940 ccacatgaagcacactgctgagcc 2963

---

>gb|AC021070.24| Homo sapiens 12 BAC RP11-460N10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 162978

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 305   agatcttctgatggaggttgaaga 328
             |||||| |||||||||||||||||
Sbjct: 89339 agatctgctgatggaggttgaaga 89362

---

>gb|AC108111.3| Homo sapiens chromosome 5 clone RP11-266I10, complete sequence
          Length = 118166

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 42   aagaagtacatggctgacat 61
            ||||||||||||||||||||
Sbjct: 4650 aagaagtacatggctgacat 4631

---

>gb|AC026790.5| Homo sapiens chromosome 5 clone CTD-2228A4, complete sequence
          Length = 102424

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 42   aagaagtacatggctgacat 61
            ||||||||||||||||||||
Sbjct: 4817 aagaagtacatggctgacat 4836

---

>ref|NM_026408.3| Mus musculus synuclein, alpha interacting protein (synphilin)
            (Sncaip), mRNA
          Length = 3651

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 272  ccacatgaagcacaatgctgagcc 295
            |||||||||||||| |||||||||
Sbjct: 3064 ccacatgaagcacactgctgagcc 3087

---

>dbj|AK132346.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:4022426M18 product:synuclein, alpha
            interacting protein (synphilin), full insert sequence
          Length = 3586

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 272  ccacatgaagcacaatgctgagcc 295
            |||||||||||||| |||||||||
Sbjct: 3065 ccacatgaagcacactgctgagcc 3088

---

>dbj|AK160111.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420049J19 product:synuclein, alpha
            interacting protein (synphilin), full insert sequence
          Length = 3628

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 272  ccacatgaagcacaatgctgagcc 295
            |||||||||||||| |||||||||
Sbjct: 3040 ccacatgaagcacactgctgagcc 3063

---

>gb|AY057102.1| Arabidopsis thaliana flavin-containing monooxygenase YUCCA (YUCCA)
            gene, complete cds
          Length = 1967

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 363  aactacaaaagaacttgttt 382
            ||||||||||||||||||||
Sbjct: 1186 aactacaaaagaacttgttt 1205

---

>dbj|AK017012.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
            library, clone:4933431L15 product:synuclein, alpha
            interacting protein (synphilin), full insert sequence
          Length = 2559

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 272  ccacatgaagcacaatgctgagcc 295
            |||||||||||||| |||||||||
Sbjct: 1971 ccacatgaagcacactgctgagcc 1994

---

>ref|XM_343228.2| PREDICTED: Rattus norvegicus ring finger protein (C3HC4 type) 19
            (predicted) (Rnf19_predicted), mRNA
          Length = 4012

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 271  tccacatgaagcacaatgct 290
            ||||||||||||||||||||
Sbjct: 2756 tccacatgaagcacaatgct 2737

---

>gb|AC125063.4| Mus musculus BAC clone RP23-425N17 from 5, complete sequence
          Length = 194931

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     gctgaaggcgaaagggagag 109
              ||||||||||||||||||||
Sbjct: 145211 gctgaaggcgaaagggagag 145230

---

>gb|AC124126.14| Mus musculus chromosome 18, clone RP23-377C8, complete sequence
          Length = 192355

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 272    ccacatgaagcacaatgctgagcc 295
              |||||||||||||| |||||||||
Sbjct: 132522 ccacatgaagcacactgctgagcc 132499

---

>gb|AC113434.34| Mus musculus strain C57BL/6J clone rp23-456n12 map 5, complete sequence
          Length = 203821

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 90     gctgaaggcgaaagggagag 109
              ||||||||||||||||||||
Sbjct: 172521 gctgaaggcgaaagggagag 172540


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,216,195
Number of Sequences: 3902068
Number of extensions: 3216195
Number of successful extensions: 75209
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74974
Number of HSP's gapped (non-prelim): 235
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---