ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8h10 |
|---|---|
| Clone Library Name | barley_pub |
>XYNC_PSEFL (P23031) Alpha-L-arabinofuranosidase C precursor (EC 3.2.1.55)| (Xylanase C) Length = 571 Score = 34.3 bits (77), Expect = 0.32 Identities = 18/48 (37%), Positives = 28/48 (58%) Frame = -1 Query: 589 ELSACPADWLLLVDVIKFTKGFIRSVNCGGAASSTSRESFARDSGTGS 446 +LSA A+ L +D + G +R+ NCG +SS+S +S + S T S Sbjct: 271 QLSATTAEGLPNIDSLSVVGGTVRAGNCGSVSSSSSVQSSSSSSSTPS 318
>IFEB_HELPO (P16275) Non-neuronal cytoplasmic intermediate filament protein B| (IFB) Length = 450 Score = 33.9 bits (76), Expect = 0.42 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Frame = +3 Query: 222 INVQVKNSHADASHI-NRQDSRPKPVRDTTQDPLAQIKSVIDE--ALKPISEPLRSTARE 392 ++ QVK A+ + NR+ +P+RD ++ LAQ + VIDE + K +SE + + Sbjct: 92 LDAQVKKLEAENEALRNRKSESLQPIRDAYENELAQARKVIDELSSTKGVSE-AKVAGLQ 150 Query: 393 DPLAHLKSAL 422 D +A L+ + Sbjct: 151 DEIASLRELI 160
>MYBPH_MOUSE (P70402) Myosin-binding protein H (MyBP-H) (H-protein)| Length = 483 Score = 33.9 bits (76), Expect = 0.42 Identities = 23/88 (26%), Positives = 34/88 (38%) Frame = +3 Query: 213 PLRINVQVKNSHADASHINRQDSRPKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTARE 392 P ++ + AS Q+ P+P + QDP A S + A KP EP Sbjct: 21 PAKVPTTEPSGEVAASESTGQEQAPEPQKPQAQDPAAPAASAMPAATKP--EPPSEDVPS 78 Query: 393 DPLAHLKSALDEAMKSIHEPVPESLAKL 476 PL + + ++ PE L KL Sbjct: 79 APLRLTLEDVSHSSLTVSWEPPEKLGKL 106
>IFEA_HELAS (P22488) Non-neuronal cytoplasmic intermediate filament protein| (IF) Length = 575 Score = 33.9 bits (76), Expect = 0.42 Identities = 22/70 (31%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Frame = +3 Query: 222 INVQVKNSHADASHI-NRQDSRPKPVRDTTQDPLAQIKSVIDE--ALKPISEPLRSTARE 392 ++ QVK A+ + NR+ +P+RD ++ LAQ + VIDE + K +SE + + Sbjct: 93 LDAQVKKLEAENEALRNRKSESLQPIRDAYENELAQARKVIDELSSTKGVSE-AKVAGLQ 151 Query: 393 DPLAHLKSAL 422 D +A L+ + Sbjct: 152 DEIASLRELI 161
>SNF7_NEUCR (Q871Y8) Vacuolar sorting protein snf-7 (Vacuolar protein| sorting-associated protein vps-32) Length = 228 Score = 33.5 bits (75), Expect = 0.55 Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 5/140 (3%) Frame = +3 Query: 237 KNSHADASHINRQDSRPKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTAREDPLAHLKS 416 KN + + + R K T + L QI + +++ + I + + LA +++ Sbjct: 55 KNVSTNKTAAKQALRRKKVAESTLETTLGQI-TTLEQQINAIES---ANINRETLAAMQA 110 Query: 417 ALDEAMKSIH-----EPVPESLAKLSREVLDAAPPQLTDLIKPFVNLITSTNSSQSAGHA 581 A EAM IH E V E +AKL + DL ITS N Q Sbjct: 111 AR-EAMGKIHGKLTPEKVDEEMAKLQ---------EANDLSNEIATAITSANIGQPIDEG 160 Query: 582 ESSPVSSGVQQAQVDLKAND 641 E +QQ +VD K ++ Sbjct: 161 ELEDELEKLQQEEVDSKLHE 180
>XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase| B) (1,4-beta-D-xylan xylanohydrolase B) Length = 592 Score = 32.3 bits (72), Expect = 1.2 Identities = 16/48 (33%), Positives = 28/48 (58%) Frame = -1 Query: 589 ELSACPADWLLLVDVIKFTKGFIRSVNCGGAASSTSRESFARDSGTGS 446 +LSA A+ L +D + G +R+ NCG +SS+S +S + S + + Sbjct: 271 QLSATTAEGLPNIDSLSVVGGTVRAGNCGSVSSSSSVQSSSSSSSSSA 318
>SYP_METTH (O26708) Prolyl-tRNA synthetase (EC 6.1.1.15) (Proline--tRNA| ligase) (ProRS) Length = 482 Score = 32.3 bits (72), Expect = 1.2 Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 2/81 (2%) Frame = +3 Query: 213 PLRINVQVKNSHADASHINRQDSRPKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTARE 392 PLR+ + ++ A+ I+R+D+ K D L I+ + E +K I E LR+ A E Sbjct: 351 PLRVEIGPRDLEKGAAVISRRDTGEKVTAD-----LQGIEETLRELMKDILENLRTRAWE 405 Query: 393 DPLAHLKSA--LDEAMKSIHE 449 + ++ A L+EA + + E Sbjct: 406 RMESEIREAETLEEASRIVDE 426
>HISX_DEIRA (Q9RSI4) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 436 Score = 32.3 bits (72), Expect = 1.2 Identities = 20/64 (31%), Positives = 37/64 (57%), Gaps = 4/64 (6%) Frame = +3 Query: 306 TQDPLAQIKSVIDEALKPISEPLRSTAREDPLAHLK----SALDEAMKSIHEPVPESLAK 473 +++ L +++ ++E L+ + EP RS AR+ A +K +LDEA+ + PE L Sbjct: 279 SRELLLAVQAELNEQLENLPEPNRSWARDSVGARMKVVLADSLDEALDLANLYAPEHLCL 338 Query: 474 LSRE 485 L+R+ Sbjct: 339 LTRD 342
>TSH2_HUMAN (Q9NRE2) Teashirt homolog 2 (Zinc finger protein 218) (Ovarian| cancer-related protein 10-2) (OVC10-2) Length = 1034 Score = 32.0 bits (71), Expect = 1.6 Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 5/77 (6%) Frame = +3 Query: 312 DPLAQIKSVIDEALKPISEPLRSTAREDPLAHL-----KSALDEAMKSIHEPVPESLAKL 476 +PL+ ++SV++ L +EPLRS + P + KS L+ K + P A + Sbjct: 693 NPLSALQSVLNNHLGKATEPLRSPSCSSPSSSTISMFHKSNLNVMDKPVLSPASTRSASV 752 Query: 477 SREVLDAAPPQLTDLIK 527 SR L Q DL K Sbjct: 753 SRRYLFENSDQPIDLTK 769
>IF2_CHLAB (Q5L627) Translation initiation factor IF-2| Length = 874 Score = 31.6 bits (70), Expect = 2.1 Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 1/85 (1%) Frame = +3 Query: 255 ASHINRQDSRPKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTAREDPLAH-LKSALDEA 431 A H++ + S P+ +R + A S I P+S STA P+ + S L+ A Sbjct: 64 AEHVSTETS-PRRIRAKNRSSFASEDSTIPS---PVSVDTESTAFSPPVVEEVVSPLESA 119 Query: 432 MKSIHEPVPESLAKLSREVLDAAPP 506 I EP P S+ + PP Sbjct: 120 EPEIVEPTPASIVDEPETTIQEPPP 144
>RLPA_YERPE (Q8ZDG6) Rare lipoprotein A precursor| Length = 360 Score = 31.6 bits (70), Expect = 2.1 Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 1/115 (0%) Frame = +3 Query: 279 SRPKPVRDTTQDPLAQIKSVIDEALKPI-SEPLRSTAREDPLAHLKSALDEAMKSIHEPV 455 SRP P+ Q A++ I + L T P+A S A PV Sbjct: 193 SRPDLTSSGMGTPMQQDAPATGAAVQAIDNSQLSGTDATQPVASQSSGFLRAPT----PV 248 Query: 456 PESLAKLSREVLDAAPPQLTDLIKPFVNLITSTNSSQSAGHAESSPVSSGVQQAQ 620 P + + S V+D+AP + P T T+S+ S G+ S Q+AQ Sbjct: 249 PAGVLESSEPVIDSAPVTPPVVANPGPVTTTPTSSAISGGYVVQVGALSDAQRAQ 303
>Y1618_THETN (Q8R9J2) UPF0078 membrane protein TTE1618| Length = 198 Score = 31.6 bits (70), Expect = 2.1 Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 4/62 (6%) Frame = -3 Query: 269 VNVRCISMAILYLNIN---PERVQFLMDSCIMQVLVIVQH-DNIPILISVSENEVSIRAK 102 V++ ++ AI + +N P VQ L + ++ +LVI QH NI LI+ +E+++ RA+ Sbjct: 137 VSLGSMTGAITFALLNIFFPNSVQVLTFAIVLALLVIFQHRSNIKRLINGTESKIGQRAQ 196 Query: 101 LK 96 +K Sbjct: 197 IK 198
>K2C1_MOUSE (P04104) Keratin, type II cytoskeletal 1 (Cytokeratin-1) (CK-1)| (Keratin-1) (K1) (67 kDa cytokeratin) Length = 627 Score = 31.2 bits (69), Expect = 2.7 Identities = 28/134 (20%), Positives = 59/134 (44%), Gaps = 10/134 (7%) Frame = +3 Query: 234 VKNSHADASHINRQDSRPKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTAR-----EDP 398 V+N+ + S +NR R + D + ++QI+ I++A + + L+ ED Sbjct: 398 VRNTKMEISELNRMIQRLRSEIDGCKKQISQIQQNINDAEQRGEKALKDAQNKLNEIEDA 457 Query: 399 LAHLKSALDEAMKSIHEPVPESLA-----KLSREVLDAAPPQLTDLIKPFVNLITSTNSS 563 L+ K L ++ E + LA +++L+ +++ P V++ ST+ + Sbjct: 458 LSQCKEDLARLLRDFQELMNTKLALDMEIATYKKLLEGEEIRMSGECTPNVSVSVSTSHT 517 Query: 564 QSAGHAESSPVSSG 605 +G + S G Sbjct: 518 SMSGSSSRGGGSGG 531
>YQBD_BACSU (P45920) Hypothetical protein yqbD| Length = 322 Score = 30.8 bits (68), Expect = 3.6 Identities = 25/115 (21%), Positives = 52/115 (45%) Frame = +3 Query: 231 QVKNSHADASHINRQDSRPKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTAREDPLAHL 410 ++KN+HA ++ Q + + T + ++ I EAL+PI + L + +E+ Sbjct: 206 EIKNAHAALGNLLSQVETKEGEEEMTSE---EVTKSIQEALEPIKKRLETLEKEE----- 257 Query: 411 KSALDEAMKSIHEPVPESLAKLSREVLDAAPPQLTDLIKPFVNLITSTNSSQSAG 575 L++ K E + KL + + +A P L D I+ ++ ++ +G Sbjct: 258 --ELNKKDKEKEEETEKEGEKLKKAISEAVQP-LADRIEAIEKSRGTSKQTEESG 309
>IF2_PROMM (Q7V5M4) Translation initiation factor IF-2| Length = 1125 Score = 30.8 bits (68), Expect = 3.6 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 1/73 (1%) Frame = +3 Query: 291 PVRDTTQDPLAQIKSVIDEALKPISEPLRSTAREDPLAHLKSALDEAMKSIHEPVPESLA 470 P + + + +K A+K ++ P+R ++H+K + P+P S A Sbjct: 64 PSKSEPEKTILSVKKAAPTAIKDVAPPIRKATSSSEISHVKPSAPA------NPIPTSPA 117 Query: 471 KLSRE-VLDAAPP 506 + S E V APP Sbjct: 118 RPSTESVAHPAPP 130
>MYH3_CHICK (P02565) Myosin heavy chain, fast skeletal muscle, embryonic| Length = 1940 Score = 30.8 bits (68), Expect = 3.6 Identities = 22/81 (27%), Positives = 37/81 (45%) Frame = +3 Query: 258 SHINRQDSRPKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTAREDPLAHLKSALDEAMK 437 SH NRQ + + TQ L + +D+AL+ + A + A+L A E ++ Sbjct: 1635 SHANRQAAEAQKNLRNTQGVLKDTQIHLDDALRSQEDLKEQVAMVERRANLLQAEIEELR 1694 Query: 438 SIHEPVPESLAKLSREVLDAA 500 + E S +E+LDA+ Sbjct: 1695 AALEQTERSRKVAEQELLDAS 1715
>NCKP1_ORYSA (Q6ZBH9) Probable protein NAP1 (Nck-associated protein 1)| (P125Nap1) (NAP of plants) Length = 1359 Score = 30.4 bits (67), Expect = 4.7 Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 6/68 (8%) Frame = +3 Query: 420 LDEAMKSIHEPVP---ESLAKLSREVLDAAPPQLTDLIKPFVNL---ITSTNSSQSAGHA 581 LD +K + + V E++ K E + A LTDL K ++++ +TS+ SS + H Sbjct: 535 LDATLKGLFQQVLHCLENIPKPQGENVPAITCDLTDLRKHWLSILMIVTSSRSSVNIRHL 594 Query: 582 ESSPVSSG 605 E + VS+G Sbjct: 595 EKATVSTG 602
>VP47_BPAPS (Q9T1Q1) Putative protein p47| Length = 190 Score = 30.4 bits (67), Expect = 4.7 Identities = 27/138 (19%), Positives = 61/138 (44%), Gaps = 5/138 (3%) Frame = +3 Query: 222 INVQVKNSHADASHINRQDSRP--KPVRDTTQDPLAQIKSVIDEALKPISEPLRSTARED 395 I++ V+ SH A+ + D + + D +D A+I V + I++ + + E Sbjct: 28 ISLVVRKSHDVANVATKADIAEVKRDIADVRKDLSAEIADVRKDLSAEIADVRKDLSAE- 86 Query: 396 PLAHLKSALDEAMKSIHEPVPESLAKLSREV---LDAAPPQLTDLIKPFVNLITSTNSSQ 566 +A ++ L + + + + +A + +++ + Q+ D+ K VNL T++ Sbjct: 87 -IADVRKDLSAEIADVRKDLSAEIADVRKDMAIRFEKTDAQIADVRKDMVNLFDKTDAQI 145 Query: 567 SAGHAESSPVSSGVQQAQ 620 S + SG++ Q Sbjct: 146 SLVRKDLQLEMSGIRAEQ 163
>MYBPH_RAT (O88599) Myosin-binding protein H (MyBP-H) (H-protein)| Length = 484 Score = 30.4 bits (67), Expect = 4.7 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 2/80 (2%) Frame = +3 Query: 252 DASHINRQDSRPKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTAREDPLAHLKSALDEA 431 +AS + + P+P + T +P Q+ + + EP + +DP AH A Sbjct: 8 EASVSTSEGTAPEPAKVPTPEPSGQVAASESTGQEQAPEPQKQPQAQDPAAHEAPATPAT 67 Query: 432 MK--SIHEPVPESLAKLSRE 485 K + E VP + +L+ E Sbjct: 68 TKPEAPSEDVPSAPLQLTLE 87
>REPS2_HUMAN (Q8NFH8) RalBP1-associated Eps domain-containing protein 2| (RalBP1-interacting protein 2) (Partner of RalBP1) Length = 660 Score = 30.4 bits (67), Expect = 4.7 Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 8/88 (9%) Frame = +3 Query: 213 PLRINVQVKNSHADASHINRQDSRPKPVRDTTQDPLAQIKSVIDEAL-KPISE----PLR 377 P +N K S D + + P P +D T D +KS I+EAL K +SE P Sbjct: 396 PRDLNRMEKTSVKDMADL------PVPNQDVTSDDKQALKSTINEALPKDVSEDPATPKD 449 Query: 378 ST---AREDPLAHLKSALDEAMKSIHEP 452 S AR ++ ++++EAMK +P Sbjct: 450 SNSLKARPRSRSYSSTSIEEAMKRGEDP 477
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 30.0 bits (66), Expect = 6.1 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 4/115 (3%) Frame = +3 Query: 285 PKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTAREDPLAHLKSALDEAMKSIHEPVPES 464 P P TT+ A + + + S P+ S+ E A + + +S PV S Sbjct: 315 PTPSSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSS 374 Query: 465 LAKLSREVLDAAPPQLTDLIKPFVNLITSTNSS----QSAGHAESSPVSSGVQQA 617 + S + ++ + + P + T+ +SS S + S+PV+S ++ Sbjct: 375 TTESSSAPVTSSTTESSSAPVPTPSSSTTESSSAPVTSSTTESSSAPVTSSTTES 429
>HERC2_DROME (Q9VR91) HECT domain and RCC1-like domain-containing protein 2| Length = 4912 Score = 30.0 bits (66), Expect = 6.1 Identities = 18/60 (30%), Positives = 25/60 (41%) Frame = -1 Query: 619 CACCTPLETGELSACPADWLLLVDVIKFTKGFIRSVNCGGAASSTSRESFARDSGTGSWI 440 C+CC P G LSAC D +D + I+ + AA + S A D W+ Sbjct: 144 CSCCQPEYCGPLSACNCDGCRPLD----SDTAIKKLTTQAAAQQAAHLSQATDMVLSGWL 199
>SED4_YEAST (P25365) Protein SED4| Length = 1065 Score = 30.0 bits (66), Expect = 6.1 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 7/106 (6%) Frame = +3 Query: 306 TQDPLAQIKSVIDEALKPISEPLRSTAREDPLAHLKSALDEAMKSIH-------EPVPES 464 T +P+ + S E KP++ P E P L S + + S EP P+ Sbjct: 483 TNEPI--VSSPTSEITKPLASPTEPNIVEKPSLPLNSESIDLLSSSSNSITEYPEPTPDL 540 Query: 465 LAKLSREVLDAAPPQLTDLIKPFVNLITSTNSSQSAGHAESSPVSS 602 KLS +++ + ++T + L+++ S S H SS SS Sbjct: 541 EEKLSSLIVEQSESEITTDRESVSKLLST--ESPSLSHMPSSSSSS 584
>TCPD_CAEEL (P47208) T-complex protein 1 subunit delta (TCP-1-delta)| (CCT-delta) Length = 540 Score = 29.6 bits (65), Expect = 8.0 Identities = 17/65 (26%), Positives = 33/65 (50%) Frame = +3 Query: 207 LNPLRINVQVKNSHADASHINRQDSRPKPVRDTTQDPLAQIKSVIDEALKPISEPLRSTA 386 L+P+ +++N+HA+ + + R V D ++ + Q V A+K SE +RS Sbjct: 471 LSPIHTVTELRNNHANGNSSYGVNVRKGYVTDMVEEDVVQPLLVTASAIKQASECVRSIL 530 Query: 387 REDPL 401 + D + Sbjct: 531 KIDDI 535
>RAD50_ARCFU (O29230) DNA double-strand break repair rad50 ATPase| Length = 886 Score = 29.6 bits (65), Expect = 8.0 Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 2/103 (1%) Frame = +3 Query: 201 QKLNPLRINVQVKNSHADASHINRQDSRPKPVRDTTQDPLAQIKSVIDEA--LKPISEPL 374 Q ++ L+ +SH DA ++ + + V++ Q K ++ A +K + L Sbjct: 499 QMVDELKALENELSSH-DAEKLSAESEEYRKVKERLDGLRGQQKILLSSASRIKELKSSL 557 Query: 375 RSTAREDPLAHLKSALDEAMKSIHEPVPESLAKLSREVLDAAP 503 R E+ L +++S E + I E ESL +L REV P Sbjct: 558 REI--EEALKNVESERGELHRKIREEGFESLEELEREVQSLRP 598
>YOX1_YEAST (P34161) Homeobox protein YOX1| Length = 385 Score = 29.6 bits (65), Expect = 8.0 Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 4/69 (5%) Frame = +3 Query: 198 HQKLNPLRINVQVKNSHADASHINRQDSRPKPVRDTTQDPLAQIKSVID----EALKPIS 365 H LN +K S A H+N Q PV+ + + ++ + ID +A +P+S Sbjct: 294 HHSLNRRSSTPSIKRSQALTFHLNPQKKTLTPVKTSPNSRVNKLINSIDHSPSKAKRPVS 353 Query: 366 EPLRSTARE 392 P S R+ Sbjct: 354 NPSGSPKRK 362
>LRC40_PONPY (Q5RFE9) Leucine-rich repeat-containing protein 40| Length = 602 Score = 29.6 bits (65), Expect = 8.0 Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 8/94 (8%) Frame = +3 Query: 312 DPLAQIK-SVIDEALKPISEPLRSTAREDPLAHLKSALDEAMKSIHEPVPESLAKLSREV 488 +PL I+ +I++ + + + LRS ++D + +SA + AM E A ++ ++ Sbjct: 344 NPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIRAIITLKI 403 Query: 489 LDAA-------PPQLTDLIKPFVNLITSTNSSQS 569 LD + P ++ D +K N+ITS N S++ Sbjct: 404 LDYSDKQATLIPDEVFDAVKS--NIITSINFSKN 435
>BIN3_MOUSE (Q9JI08) Bridging integrator 3| Length = 253 Score = 29.6 bits (65), Expect = 8.0 Identities = 27/113 (23%), Positives = 51/113 (45%) Frame = +3 Query: 288 KPVRDTTQDPLAQIKSVIDEALKPISEPLRSTAREDPLAHLKSALDEAMKSIHEPVPESL 467 K ++ +T LA KS + + +S PL ++ H+ +ALD AMK + E + Sbjct: 43 KDMKKSTDADLAMSKSAVKISQDLLSNPL--CEQDQDFLHMVTALDTAMKRMDAFNQEKV 100 Query: 468 AKLSREVLDAAPPQLTDLIKPFVNLITSTNSSQSAGHAESSPVSSGVQQAQVD 626 ++ + V++ +K F ++ S N + E + G QA+V+ Sbjct: 101 NQIQKTVIEP--------LKKFSSIFPSLN--MAVKRREQALQDYGRLQAKVE 143
>METW_YEAST (Q12198) Putative cystathionine gamma-synthase YLL058W (EC| 2.5.1.48) (O-succinylhomoserine (thiol)-lyase) Length = 575 Score = 29.6 bits (65), Expect = 8.0 Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 4/43 (9%) Frame = +3 Query: 9 DTLKRFNGYVNGTHFTLNLS----ALRSKIASAFKFGPDADFI 125 D+LK F G NGT+FTL A S++ KFG D + I Sbjct: 502 DSLKVFKGPSNGTNFTLACPYVHLAHHSELEEVSKFGADPNII 544 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,381,504 Number of Sequences: 219361 Number of extensions: 1374134 Number of successful extensions: 5435 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 5243 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5432 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6029593548 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
