>YDZ1_SCHPO (O13709) Hypothetical protein C14C4.01c in chromosome I|
          Length = 244

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 27/106 (25%), Positives = 48/106 (45%)
 Frame = +3

Query: 177 ERLELNVVEKELQMLSSFDTYDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLK 356
           E + L   +  LQ       + D+G A+SP+R+ H++++  +     N LK     E + 
Sbjct: 29  ELISLGSSQDALQRSGIRSAHGDSGYASSPLRMEHLSSSTII---INNQLKKIDVNESIP 85

Query: 357 ESYSLHPFPETDDYDDTYEFGDVGPLNTDFRKSATLIDEKEDPESN 494
           E+ +LH         + YE G V         S +L+  KE+ +S+
Sbjct: 86  ENSTLH---------NKYELGAV----ESSTSSLSLLQSKEEDDSS 118

>YOS2_SCHPO (Q9P7M1) Protein C21C3.02c in chromosome II|
          Length = 491

 Score = 34.3 bits (77), Expect = 0.33
 Identities = 31/108 (28%), Positives = 49/108 (45%)
 Frame = +3

Query: 201 EKELQMLSSFDTYDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLKESYSLHPF 380
           EKE  ++ S    +D G +++  R   V N+VE     EN    +     LKES      
Sbjct: 126 EKETSLVGSVSVTEDLGDSSAIGRTILVNNSVE--PQMENTANITIVSPSLKESDFESEE 183

Query: 381 PETDDYDDTYEFGDVGPLNTDFRKSATLIDEKEDPESNIDQTVSNFHQ 524
             T+D +   E      L     + ++  +E+ED ESNI++T  + HQ
Sbjct: 184 KATNDNNGLIETNHNSKL-----EESSEHEEEEDEESNIERTEDSDHQ 226

>FOXO1_MOUSE (Q9R1E0) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)|
          Length = 652

 Score = 33.9 bits (76), Expect = 0.43
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 186 PNARLPAQNLSANRTQAQHPSSETHPGH 103
           PN+ +PA    A+  +  +PSS THPGH
Sbjct: 497 PNSVMPAYGSQASHNKMMNPSSHTHPGH 524

>CCD53_HUMAN (Q9Y3C0) Coiled-coil domain-containing protein 53|
          Length = 194

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 19/58 (32%), Positives = 31/58 (53%)
 Frame = +3

Query: 189 LNVVEKELQMLSSFDTYDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLKES 362
           LN+++ +L   SS    DD  +  SP+ V  VTN    +A +E   ++S +   L+ES
Sbjct: 66  LNILDAKL---SSIPGLDDVTVEVSPLNVTSVTNGAHPEATSEQPQQNSTQDSGLQES 120

>SRY_MOUSE (Q05738) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 395

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 1/82 (1%)
 Frame = -2

Query: 456 QISENLYSKAQRLQTRRCHHNHQSQGKDASYNSLSDILFHRCFSDCFQ-HQHPTQHCW*H 280
           Q  +  +   Q+ Q    HH+HQ Q +   +       FH       Q H HP Q    H
Sbjct: 234 QQQQQFHDHHQQKQQFHDHHHHQQQQQFHDHQQQQQ-QFHDHQQQQHQFHDHPQQKQQFH 292

Query: 279 GAPALDLQQFQHHHKYQMS*AF 214
             P    Q   HHH+ Q    F
Sbjct: 293 DHPQQQQQFHDHHHQQQQKQQF 314

>FOXC2_MOUSE (Q61850) Forkhead box protein C2 (Forkhead-related protein FKHL14)|
           (Mesenchyme fork head protein 1) (MFH-1 protein)
           (Transcription factor FKH-14)
          Length = 494

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 25/67 (37%), Positives = 29/67 (43%)
 Frame = -2

Query: 213 EALSPQHSAPNARLPAQNLSANRTQAQHPSSETHPGHTHLVSLSGHP*SCTSHTQES*NF 34
           EALS   S P + L A NL+A +  A   S   H  H HL     HP +     Q     
Sbjct: 355 EALSDHPSGPGSPLGALNLAAGQEGALGASGHHHQHHGHL-----HPQAPPPAPQ----- 404

Query: 33  GQPPAPQ 13
             PPAPQ
Sbjct: 405 -PPPAPQ 410

>FOXO1_HUMAN (Q12778) Forkhead box protein O1A (Forkhead in rhabdomyosarcoma)|
          Length = 655

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 21/59 (35%), Positives = 29/59 (49%), Gaps = 14/59 (23%)
 Frame = -2

Query: 207 LSPQHSAPNARLPAQN--------LSANRTQAQH-----PSSETHPGHTHLVS-LSGHP 73
           + P  + PN+R+  QN        +S   +QA H     PSS THPGH    S ++G P
Sbjct: 480 VDPGVAQPNSRVLGQNVMMGPNSVMSTYGSQASHNKMMNPSSHTHPGHAQQTSAVNGRP 538

>CSN5_SCHPO (O94454) COP9 signalosome complex subunit 5 (EC 3.4.-.-)|
          Length = 299

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 22/89 (24%), Positives = 39/89 (43%)
 Frame = -2

Query: 408 RCHHNHQSQGKDASYNSLSDILFHRCFSDCFQHQHPTQHCW*HGAPALDLQQFQHHHKYQ 229
           R + + ++Q     Y++L   ++       + H HP   CW  G   +D++  + + KYQ
Sbjct: 86  RVNAHEEAQEYSVQYHTLCKSVYRHENVIGWYHSHPNYGCWLSG---VDVETQRQNQKYQ 142

Query: 228 MS*AFEALSPQHSAPNARLPAQNLSANRT 142
                  L P+ S  +   P  N+ A RT
Sbjct: 143 DPFVAVVLDPKRSLES---PYVNIGAFRT 168

>YMW5_YEAST (Q04779) Hypothetical 78.8 kDa protein in ABF2-CHL12 intergenic|
           region
          Length = 684

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 8/96 (8%)
 Frame = +3

Query: 288 NNVELDADAENNLKSSGEKEYLKESYSLHPFP--------ETDDYDDTYEFGDVGPLNTD 443
           NNV++ A    N+ S   K++   +Y    FP        +  D +D     D    NT 
Sbjct: 331 NNVKIFAKLLFNIDSHNPKQFQLPNYIKETFPAVKTGSRGQYSDENDKIPLTDRQLFNTS 390

Query: 444 FRKSATLIDEKEDPESNIDQTVSNFHQEYEVFELRI 551
           + +S T +D   +P+++ID     F   Y+  + R+
Sbjct: 391 YGQSITKLD-SYNPDTHIDSNSGKFLICYKCNQTRL 425

>SRY_MUSSP (Q62563) Sex-determining region Y protein (Testis-determining|
           factor)
          Length = 355

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 22/74 (29%), Positives = 26/74 (35%), Gaps = 3/74 (4%)
 Frame = -2

Query: 426 QRLQTRRCHHNHQSQGKDASYNSLSDILFHRCFSDCFQ---HQHPTQHCW*HGAPALDLQ 256
           Q+ Q    HH+HQ Q +    +      FH       Q   H HP Q    H  P    Q
Sbjct: 217 QQQQQFHDHHHHQQQQQQFHDHHQQKQQFHDHHQQQQQQQFHDHPQQQQQFHDHPQQKQQ 276

Query: 255 QFQHHHKYQMS*AF 214
              HHH  Q    F
Sbjct: 277 FHDHHHHQQQKQQF 290

>PALA_SCHPO (Q09807) pH-response regulator protein palA/rim20|
          Length = 701

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 20/111 (18%), Positives = 54/111 (48%)
 Frame = +3

Query: 15  EELEVVRNSSSPVYGRYKIMDDQTEILDECGLDVFRMKDAVLECDLPRDSGQVDERLELN 194
           EE++ V ++        K+M++ TEI +  GL+  R + + L+C + + +G    R    
Sbjct: 387 EEIKSVNDNRYITETSNKVMENFTEIKNLGGLEFLRSEASSLDCLIDKVNGTY--RHCCQ 444

Query: 195 VVEKELQMLSSFDTYDDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKE 347
            +++ +  + S     + G  +  +++    + ++++ +   N K + +K+
Sbjct: 445 ALDEIINSVKSSQNMKEKGFYSDVIKLHEEVSLLKVNVENSQNAKDTIQKD 495

>KNOB_PLAFG (P09346) Knob-associated histidine-rich protein precursor (KAHRP)|
           (KP)
          Length = 634

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 28/113 (24%), Positives = 36/113 (31%)
 Frame = -2

Query: 444 NLYSKAQRLQTRRCHHNHQSQGKDASYNSLSDILFHRCFSDCFQHQHPTQHCW*HGAPAL 265
           N  + AQ+      HH+HQ Q +  + +       H        HQ P  H   HG    
Sbjct: 52  NKRTLAQKQHEHHHHHHHQHQHQHQAPHQAH----HHHHHGEVNHQAPQVHQQVHGQDQA 107

Query: 264 DLQQFQHHHKYQMS*AFEALSPQHSAPNARLPAQNLSANRTQAQHPSSETHPG 106
                 HHH+         L PQ        P  N    +TQ      E  PG
Sbjct: 108 HHHHHHHHHQ---------LQPQQLQGTVANPPSNEPVVKTQV---FREARPG 148

>CYTSA_CANFA (Q2KNA0) Cytospin-A|
          Length = 1117

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 31/135 (22%), Positives = 49/135 (36%), Gaps = 18/135 (13%)
 Frame = +3

Query: 240 DDAGIAASPVRVRHVTNNVELDADAENNLKSS--GEKEYLKESYSLHPFPETDDYDDTYE 413
           +  G AA    +      V  D    N LK+    EK+ + E YS+H   +  D  D  E
Sbjct: 551 EQKGKAALAATLEEYKATVASDQIEMNRLKAQLENEKQKVAELYSIHNSGDKSDIQDLLE 610

Query: 414 FGDVGPLNTDFRKSATLIDEKED-------PESNIDQTVSNFHQEYEVF---------EL 545
                 +  D  K+ TL    ++         + +  T++    EY  F         EL
Sbjct: 611 -----SVRLDKEKAETLASSLQEDLAHTRNDANRLQDTIAKVEDEYRAFQEEAKKQIEEL 665

Query: 546 RIVHRKNRTGFEENK 590
            +   K R+  EE +
Sbjct: 666 NMTLEKLRSELEEKE 680

>RPOB_LACLA (Q9CEN6) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
           beta subunit) (Transcriptase beta chain) (RNA polymerase
           beta subunit)
          Length = 1196

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 16/52 (30%), Positives = 27/52 (51%)
 Frame = +3

Query: 240 DDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLKESYSLHPFPETDD 395
           +D+  A   V  RH  NN+E++A   + +  S  K+ +  + +  PF E DD
Sbjct: 587 EDSRFANETVMARHTGNNIEVEASTADYMDVS-PKQVIAVAAACIPFLENDD 637

>TAL_BUCAP (Q8KA27) Transaldolase (EC 2.2.1.2)|
          Length = 316

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 18/72 (25%), Positives = 36/72 (50%)
 Frame = +3

Query: 63  YKIMDDQTEILDECGLDVFRMKDAVLECDLPRDSGQVDERLELNVVEKELQMLSSFDTYD 242
           YKI++   +IL + G+++ +     +       S +VD RL  N  +  L+     D Y+
Sbjct: 67  YKIVNASDKILVDLGVEILKHIPGYI-------SSEVDARLSFNKEKCILKAKKIIDMYE 119

Query: 243 DAGIAASPVRVR 278
           + GI+ + V ++
Sbjct: 120 EKGISRNRVLIK 131

>DHET_ACEPO (P28036) Alcohol dehydrogenase [acceptor] precursor (EC 1.1.99.8)|
          Length = 738

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 107 PGCVSDEGCCA*VRFAERFWAGRRAFG 187
           PG ++D+GCC  V     +W G+  FG
Sbjct: 135 PGNIADKGCCDTVNRGAAYWNGKVYFG 161

>LDOX_PETHY (P51092) Leucoanthocyanidin dioxygenase (EC 1.14.11.19) (LDOX)|
           (Leucocyanidin oxygenase) (Leucoanthocyanidin
           hydroxylase)
          Length = 430

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 21/80 (26%), Positives = 35/80 (43%)
 Frame = +3

Query: 354 KESYSLHPFPETDDYDDTYEFGDVGPLNTDFRKSATLIDEKEDPESNIDQTVSNFHQEYE 533
           KE   L P PET    +   F    P  T  +  A  +  K+D ++ ++  V N  +   
Sbjct: 313 KEKIILKPLPETVTEAEPPRF----PPRTFAQHMAHKLFRKDDKDAAVEHKVFNEDELDT 368

Query: 534 VFELRIVHRKNRTGFEENKD 593
             E +++ + N+    ENKD
Sbjct: 369 AAEHKVLKKDNQDAVAENKD 388

>CYTSA_RAT (Q2KN99) Cytospin-A|
          Length = 1118

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 27/110 (24%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
 Frame = +3

Query: 240 DDAGIAASPVRVRHVTNNVELDADAENNLKSSGEKEYLK--ESYSLHPFPETDDYDDTYE 413
           +  G AA    +      V  D    N LK+  EKE  K  E YS+H   +  D  D  E
Sbjct: 552 EQKGKAALAATLEEYKATVASDQIEMNRLKAQLEKEKQKVAELYSIHNSGDKSDIQDLLE 611

Query: 414 FGDVGPLNTDFRKSATLIDEKED-------PESNIDQTVSNFHQEYEVFE 542
                 +  D  K+ TL    ++         + +  T++    EY  F+
Sbjct: 612 -----SVRLDKEKAETLASSLQEDLAHTRNDANRLQDTIAKVEDEYRAFQ 656

>DHET_ACEEU (Q44002) Alcohol dehydrogenase [acceptor] precursor (EC 1.1.99.8)|
          Length = 739

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 107 PGCVSDEGCCA*VRFAERFWAGRRAFG 187
           PG ++D+GCC  V     +W G+  FG
Sbjct: 135 PGNIADKGCCDTVNRGAAYWNGKVYFG 161

>KNOB_PLAFA (P13817) Knob-associated histidine-rich protein precursor (KAHRP)|
           (HRPI) (Fragment)
          Length = 473

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 28/113 (24%), Positives = 36/113 (31%)
 Frame = -2

Query: 444 NLYSKAQRLQTRRCHHNHQSQGKDASYNSLSDILFHRCFSDCFQHQHPTQHCW*HGAPAL 265
           N  + AQ+      HH+HQ Q +  + +       H        HQ P  H   HG    
Sbjct: 52  NKRTLAQKQHEHHHHHHHQHQHQHQAPHQAH----HHHHHGEVNHQAPQVHQQVHGQDQA 107

Query: 264 DLQQFQHHHKYQMS*AFEALSPQHSAPNARLPAQNLSANRTQAQHPSSETHPG 106
                 HHH+         L PQ        P  N    +TQ      E  PG
Sbjct: 108 HHHHHHHHHQ---------LQPQQLQGTVANPPSNEPVVKTQV---FREARPG 148


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,327,130
Number of Sequences: 219361
Number of extensions: 1745139
Number of successful extensions: 5464
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 5250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5449
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)