>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                            
Query: 147      tgggccgggcccgacgagatcctcctctccacctccctggccggcttcttagatagtgag 206
                ||||||||||||||||||||| |||||||||| ||||||||||||||||| || ||||||
Sbjct: 22199612 tgggccgggcccgacgagatcttcctctccacgtccctggccggcttcttggacagtgag 22199671

>emb|AL731593.2|OSJN00235 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0027P08,
             complete sequence
          Length = 118959

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 56/60 (93%)
 Strand = Plus / Plus

                                                                         
Query: 147   tgggccgggcccgacgagatcctcctctccacctccctggccggcttcttagatagtgag 206
             ||||||||||||||||||||| |||||||||| ||||||||||||||||| || ||||||
Sbjct: 69473 tgggccgggcccgacgagatcttcctctccacgtccctggccggcttcttggacagtgag 69532

>ref|XM_472650.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 411

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 147 tgggccgggcccgacgagatcctcctctccacctccctggccggcttctt 196
           ||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 10  tgggccgggcccgacgagatcttcctctccacgtccctggccggcttctt 59

>dbj|AK099454.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022L10, full
           insert sequence
          Length = 825

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 48/50 (96%)
 Strand = Plus / Plus

                                                             
Query: 147 tgggccgggcccgacgagatcctcctctccacctccctggccggcttctt 196
           ||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 240 tgggccgggcccgacgagatcttcctctccacgtccctggccggcttctt 289

>gb|BT016332.1| Zea mays clone Contig165 mRNA sequence
          Length = 959

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Minus

                                                                    
Query: 140 gatgtcttgggccgggcccgacgagatcctcctctccacctccctggccggcttctt 196
           |||||||||| ||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 655 gatgtcttggtccgcgcccgacgacatcctcctctccacctccctcgccggcttctt 599

>gb|AY105064.1| Zea mays PCO112709 mRNA sequence
          Length = 965

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 53/57 (92%)
 Strand = Plus / Plus

                                                                    
Query: 140 gatgtcttgggccgggcccgacgagatcctcctctccacctccctggccggcttctt 196
           |||||||||| ||| ||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 271 gatgtcttggtccgcgcccgacgacatcctcctctccacctccctcgccggcttctt 327

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                        
Query: 201     agtgagattccttcctcagatgctt 225
               |||||||||||||||||||||||||
Sbjct: 2339503 agtgagattccttcctcagatgctt 2339527

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 44.1 bits (22), Expect = 0.47
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 106     ccgctatttctagcgccggatt 127
               ||||||||||||||||||||||
Sbjct: 1045092 ccgctatttctagcgccggatt 1045071

>ref|XM_869684.1| PREDICTED: Bos taurus similar to Striatin-4 (Zinedin), transcript
            variant 2 (LOC506040), mRNA
          Length = 3095

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 168  ctcctctccacctccctggcc 188
            |||||||||||||||||||||
Sbjct: 2646 ctcctctccacctccctggcc 2666

>ref|XM_582431.2| PREDICTED: Bos taurus similar to Striatin-4 (Zinedin), transcript
            variant 1 (LOC506040), mRNA
          Length = 3074

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 168  ctcctctccacctccctggcc 188
            |||||||||||||||||||||
Sbjct: 2625 ctcctctccacctccctggcc 2645

>gb|AC145725.2| Gasterosteus aculeatus clone CH213-173B10, complete sequence
          Length = 158904

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 162   gagatcctcctctccacctcc 182
             |||||||||||||||||||||
Sbjct: 15265 gagatcctcctctccacctcc 15285

>gb|AC110302.4| Mus musculus BAC clone RP24-194G21 from 12, complete sequence
          Length = 168601

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 477   tcatgtttctgtgtgtatcag 497
             |||||||||||||||||||||
Sbjct: 91085 tcatgtttctgtgtgtatcag 91065

>dbj|AK133547.1| Mus musculus adult male xiphoid cartilage cDNA, RIKEN full-length
            enriched library, clone:5230401L13
            product:fucosyltransferase 8, full insert sequence
          Length = 3511

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 477  tcatgtttctgtgtgtatcag 497
            |||||||||||||||||||||
Sbjct: 1112 tcatgtttctgtgtgtatcag 1132

>dbj|AK157989.1| Mus musculus adult inner ear cDNA, RIKEN full-length enriched
            library, clone:F930014A18 product:fucosyltransferase 8,
            full insert sequence
          Length = 3512

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 477  tcatgtttctgtgtgtatcag 497
            |||||||||||||||||||||
Sbjct: 1156 tcatgtttctgtgtgtatcag 1176

>gb|AF269246.2|AF269246 Rattus norvegicus protease activated receptor 4 mRNA, complete cds
          Length = 1694

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 164  gatcctcctctccacctccct 184
            |||||||||||||||||||||
Sbjct: 1370 gatcctcctctccacctccct 1350

>dbj|AK165305.1| Mus musculus 6 days neonate spleen cDNA, RIKEN full-length enriched
           library, clone:F430011J12 product:unclassifiable, full
           insert sequence
          Length = 3003

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 477 tcatgtttctgtgtgtatcag 497
           |||||||||||||||||||||
Sbjct: 619 tcatgtttctgtgtgtatcag 639

>ref|XM_342498.2| PREDICTED: Rattus norvegicus mitogen activated protein kinase binding
            protein 1 (predicted) (Mapkbp1_predicted), mRNA
          Length = 4681

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 483  ttctgtgtgtatcagccccaa 503
            |||||||||||||||||||||
Sbjct: 1601 ttctgtgtgtatcagccccaa 1621

>ref|NM_053808.1| Rattus norvegicus coagulation factor II (thrombin) receptor-like 3
            (F2rl3), mRNA
          Length = 1694

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 164  gatcctcctctccacctccct 184
            |||||||||||||||||||||
Sbjct: 1370 gatcctcctctccacctccct 1350

>gb|AC112514.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone
             OSJNAb0023M11, complete sequence
          Length = 120228

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ctcaaaccctagaagcaatc 49
             ||||||||||||||||||||
Sbjct: 20677 ctcaaaccctagaagcaatc 20658

>gb|AC183807.3| Pan troglodytes BAC clone CH251-65H22 from chromosome 9, complete
             sequence
          Length = 171193

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 10    tccaccaaattctccactcgctcaaacc 37
             ||||||| ||||||||||||| ||||||
Sbjct: 57772 tccaccatattctccactcgcacaaacc 57799

>ref|XM_544635.2| PREDICTED: Canis familiaris similar to mitogen-activated protein
            kinase binding protein 1-like (LOC487511), mRNA
          Length = 4614

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 484  tctgtgtgtatcagccccaa 503
            ||||||||||||||||||||
Sbjct: 1540 tctgtgtgtatcagccccaa 1559

>gb|AC182586.3| Pan troglodytes BAC clone CH251-499F21 from chromosome 9, complete
             sequence
          Length = 208237

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 10    tccaccaaattctccactcgctcaaacc 37
             ||||||| ||||||||||||| ||||||
Sbjct: 17136 tccaccatattctccactcgcacaaacc 17163

>emb|AL691447.18| Human DNA sequence from clone RP11-307E17 on chromosome 9 Contains the
             gene for zinc finger protein 169, a voltage-dependent
             anion channel 1  (VDAC1) pseudogene, a novel gene
             (DKFZp434I1117), a novel pseudogene, a novel gene, the 5'
             end of a gene for a novel protein similar to mouse
             hippocampus abundant gene transcript 1(HIAT1) and three
             CpG islands, complete sequence
          Length = 171255

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 10    tccaccaaattctccactcgctcaaacc 37
             ||||||| ||||||||||||| ||||||
Sbjct: 85547 tccaccatattctccactcgcacaaacc 85520

>emb|AL158827.27| Human DNA sequence from clone RP11-330M2 on chromosome 9 Contains a
              pseudogene similar to part of a zinc finger protein, two
              novel pseudogenes, a novel gene similar to DKFZP434I1117, a
              novel pseudogene (FLJ23476), two novel gene, a novel gene
              similar to MGC12954 and four CpG islands, complete sequence
          Length = 186108

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 10     tccaccaaattctccactcgctcaaacc 37
              ||||||| ||||||||||||| ||||||
Sbjct: 122536 tccaccatattctccactcgcacaaacc 122563

>gb|AC092749.1| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBb0023M11, from chromosome 10,
             complete sequence
          Length = 138668

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 30    ctcaaaccctagaagcaatc 49
             ||||||||||||||||||||
Sbjct: 99345 ctcaaaccctagaagcaatc 99326

>ref|XM_941878.1| PREDICTED: Homo sapiens similar to isoleucine-tRNA synthetase
           (LOC652435), mRNA
          Length = 189

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 10  tccaccaaattctccactcgctcaaacc 37
           ||||||| ||||||||||||| ||||||
Sbjct: 152 tccaccatattctccactcgcacaaacc 125

>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 30       ctcaaaccctagaagcaatc 49
                ||||||||||||||||||||
Sbjct: 10179124 ctcaaaccctagaagcaatc 10179105

>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 30       ctcaaaccctagaagcaatc 49
                ||||||||||||||||||||
Sbjct: 10185163 ctcaaaccctagaagcaatc 10185144

>gb|U30323.1|TAU30323 Triticum aestivum beta 1,3-glucanase (Glc1) mRNA, complete cds
          Length = 2072

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 160 acgagatcctcctctccacc 179
           ||||||||||||||||||||
Sbjct: 400 acgagatcctcctctccacc 419

>emb|AL772267.9| Human DNA sequence from clone RP13-37K15 on chromosome 9, complete
             sequence
          Length = 115952

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 10    tccaccaaattctccactcgctcaaacc 37
             ||||||| ||||||||||||| ||||||
Sbjct: 42131 tccaccatattctccactcgcacaaacc 42104


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,040,234
Number of Sequences: 3902068
Number of extensions: 4040234
Number of successful extensions: 72800
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 72654
Number of HSP's gapped (non-prelim): 146
length of query: 542
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 519
effective length of database: 17,143,297,704
effective search space: 8897371508376
effective search space used: 8897371508376
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)