>MUC13_MOUSE (P19467) Mucin-13 precursor (Cell surface antigen 114/A10)|
           (Lymphocyte antigen 64)
          Length = 573

 Score = 32.3 bits (72), Expect = 0.54
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
 Frame = +3

Query: 204 NTSASAPPTRPTLCAPSSGTMASPTLTSSGRCAAPRCFSSLTPNXXXXXXXXXXXXXXXX 383
           ++  ++PPT     +P S + AS T +SSG  + P    S +P                 
Sbjct: 82  SSGGASPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSSSQASTTTSSSGGAS 141

Query: 384 --XXXXQLSLCSSHAASTSTS 440
                   S  SS  AST+TS
Sbjct: 142 PPTTVQSQSPGSSSQASTTTS 162



 Score = 32.3 bits (72), Expect = 0.54
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
 Frame = +3

Query: 204 NTSASAPPTRPTLCAPSSGTMASPTLTSSGRCAAPRCFSSLTPNXXXXXXXXXXXXXXXX 383
           ++  ++PPT     +P S + AS T +SSG  + P    S +P                 
Sbjct: 55  SSGGASPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSSSQASTTTSSSGGAS 114

Query: 384 --XXXXQLSLCSSHAASTSTS 440
                   S  SS  AST+TS
Sbjct: 115 PPTTVQSQSPGSSSQASTTTS 135



 Score = 32.3 bits (72), Expect = 0.54
 Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
 Frame = +3

Query: 204 NTSASAPPTRPTLCAPSSGTMASPTLTSSGRCAAPRCFSSLTPNXXXXXXXXXXXXXXXX 383
           ++  ++PPT     +P S + AS T +SSG  + P    S +P                 
Sbjct: 28  SSGGTSPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSSSQASTTTSSSGGAS 87

Query: 384 --XXXXQLSLCSSHAASTSTS 440
                   S  SS  AST+TS
Sbjct: 88  PPTTVQSQSPGSSSQASTTTS 108



 Score = 30.8 bits (68), Expect = 1.6
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 2/81 (2%)
 Frame = +3

Query: 204 NTSASAPPTRPTLCAPSSGTMASPTLTSSGRCAAPRCFSSLTPNXXXXXXXXXXXXXXXX 383
           ++  ++PPT     +P S + AS T +SSG  + P    S +P                 
Sbjct: 109 SSGGASPPTTVQSQSPGSSSQASTTTSSSGGASPPTTVQSQSPGSSSQASTTTSSSGGAS 168

Query: 384 --XXXXQLSLCSSHAASTSTS 440
                   S  SS   ST+TS
Sbjct: 169 PPTTVQSQSPGSSSQVSTTTS 189

>KLF11_HUMAN (O14901) Krueppel-like factor 11 (Transforming growth|
           factor-beta-inducible early growth response protein 2)
           (TGFB-inducible early growth response protein 2)
           (TIEG-2)
          Length = 512

 Score = 31.2 bits (69), Expect = 1.2
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = +3

Query: 201 LNTSASAPPTRPTLCAPSSGTMASPTLTSSGRCAA 305
           L+T    PP  P L  PS+ T  SP +T S  C A
Sbjct: 101 LSTLCITPPQSPDLVEPSTRTPVSPQVTDSKACTA 135

>BAT2_MACMU (Q5TM26) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2160

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 210 SASAPPTRPTLCAPSSGTMASPTLTSSG 293
           SA APP +   C P+ G  A+PTL S G
Sbjct: 549 SAQAPPAQ---CTPTPGVAAAPTLVSGG 573

>RUVA_DEIRA (Q9RUV7) Holliday junction ATP-dependent DNA helicase ruvA (EC|
           3.6.1.-)
          Length = 201

 Score = 29.6 bits (65), Expect = 3.5
 Identities = 23/56 (41%), Positives = 31/56 (55%)
 Frame = +2

Query: 167 LSPAAAGAVTTSQHLRIRSTDKADAVRALLRHYGFADADIVRALRSASVLLVLDPE 334
           L+ AA+GA    +  R+ ST   DAV ALL   GF +A +  A+   + LL  DPE
Sbjct: 135 LAAAASGAAGGKRPARVSSTAGHDAVDALLA-LGFREAQVRAAV---AELLGADPE 186

>IF2_COREF (Q8FPA7) Translation initiation factor IF-2|
          Length = 964

 Score = 25.0 bits (53), Expect(2) = 4.4
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +1

Query: 310 GASRP*PRTDPPPQARLFRLPRLRDPQARN*AFAPRTQPRQAPR 441
           G   P P   P P A+    P  R P+  N  F+     R  PR
Sbjct: 159 GGEAPRPNAMPRPMAKPGPKPGARAPRVANNPFSTGAADRPGPR 202



 Score = 22.7 bits (47), Expect(2) = 4.4
 Identities = 10/33 (30%), Positives = 17/33 (51%)
 Frame = +3

Query: 207 TSASAPPTRPTLCAPSSGTMASPTLTSSGRCAA 305
           T+A   P +PT   P++   + PT   + + AA
Sbjct: 118 TAAKPAPAKPTAPKPATPAFSGPTPGDAAKKAA 150

>SPHS_SYNP7 (P39664) Sensor protein sphS (EC 2.7.13.3)|
          Length = 413

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 5/73 (6%)
 Frame = +2

Query: 167 LSPAAAGAVTTSQHLRIRSTDKADAVRALLR---HYGFADAD--IVRALRSASVLLVLDP 331
           + P  A   +    L   +TD  D  R L      +   DAD  ++ A RSA VLL L P
Sbjct: 28  VKPMLAAVSSLEPQLEQITTDLRDRDRLLEDLPVSFLLLDADNLVLEANRSARVLLALPP 87

Query: 332 EQILRPKLDFFAS 370
           E   RP L+   S
Sbjct: 88  EDYCRPLLEVVRS 100

>ZF2N3_ARATH (Q9SZ69) Zinc finger A20 and AN1 domains-containing protein|
           At4g12040
          Length = 175

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 16/41 (39%), Positives = 18/41 (43%)
 Frame = +3

Query: 204 NTSASAPPTRPTLCAPSSGTMASPTLTSSGRCAAPRCFSSL 326
           N S S PPT P LC    G   SP    S      +C+ SL
Sbjct: 6   NNSTSFPPTEPKLCDNGCGFFGSP----SNMNLCSKCYRSL 42

>SYD_SYNSC (Q3AGF9) Aspartyl-tRNA synthetase (EC 6.1.1.12) (Aspartate--tRNA|
           ligase) (AspRS)
          Length = 609

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 19/48 (39%), Positives = 25/48 (52%)
 Frame = -1

Query: 240 ASALSVERMRRC*EVVTAPAAAGERPHEMR*EMVSRQGSELGTLLTAG 97
           A  L+  R+R   E+ T  A       E R E++SR G+E GTLL  G
Sbjct: 356 AGGLAFIRVRDGGEIDTIGAIKDNLSDEQRQELLSRTGAEPGTLLLFG 403

>MCM7_XENLA (Q91876) DNA replication licensing factor MCM7 (CDC47 homolog)|
           (x.MCM7)
          Length = 720

 Score = 29.3 bits (64), Expect = 4.5
 Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
 Frame = -3

Query: 358 VELGAEDLFGVKDEKHRGAAQRPDDV--SVGEAIVPEEGAHSV 236
           +E+  + L G  D+ H    QRP DV  S    +VPE+GA SV
Sbjct: 636 MEMSKDSLLG--DKGHTSRTQRPADVIFSTIREMVPEKGARSV 676

>GUX1_PHACH (P13860) Exoglucanase 1 precursor (EC 3.2.1.91) (Exoglucanase I)|
           (Exocellobiohydrolase I) (1,4-beta-cellobiohydrolase)
          Length = 516

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +3

Query: 204 NTSASAPPTRPT-LCAPSSGTMASPTLTSSGRCAAPRCFSSLTP 332
           ++S+S PPT+PT +  P  G       T S  CA+P     L P
Sbjct: 467 HSSSSTPPTQPTGVTVPQWGQCGGIGYTGSTTCASPYTCHVLNP 510

>GDF7_CERAE (Q9BDW8) Growth/differentiation factor 7 precursor (GDF-7)|
          Length = 447

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 16/47 (34%), Positives = 21/47 (44%)
 Frame = -2

Query: 437 GACRGCVRGAKAQLRACGSRSLGRRKSRAWGGGSVRGQGREAPRRCA 297
           G   G  R   A  R   +   G R ++  GGG+ RG GR    RC+
Sbjct: 301 GTGTGSPRAVTAGRRRRRTALAGTRTAQGSGGGAGRGHGRRGRSRCS 347

>EP400_HUMAN (Q96L91) E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa|
            SWI2/SNF2-related protein) (Domino homolog) (hDomino)
            (CAG repeat protein 32) (Trinucleotide repeat-containing
            gene 12 protein)
          Length = 3160

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 21/71 (29%), Positives = 35/71 (49%)
 Frame = +1

Query: 229  QGRRCARPPQALWLRRR*HRPGVAQRLGASRP*PRTDPPPQARLFRLPRLRDPQARN*AF 408
            +  R A+  +AL  +++  +P VAQ      P P+  PPPQ     LP+ +   ++  A 
Sbjct: 2518 RAERIAKEKKALADQQKAQQPAVAQ---PPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAG 2574

Query: 409  APRTQPRQAPR 441
             P  QP+  P+
Sbjct: 2575 PPAVQPQPQPQ 2585

>Y3910_BRUSU (Q8FVD4) UPF0309 protein BRA0910|
          Length = 242

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +2

Query: 143 ISYLISCGLSPAAAGAVTTSQHLRIRSTDKADAVRALLRHYGFADADIVRALRSASV 313
           I+  I CG      GAV +S   RI       AVR +L  YG  D D++  + ++ V
Sbjct: 68  ITVPILCGSIMLQDGAVASSHFERIEG-----AVRPILDRYGIRDGDVLVVVSNSGV 119

>Y3386_BRUME (Q8YCZ1) UPF0309 protein BMEII0386|
          Length = 242

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/57 (33%), Positives = 27/57 (47%)
 Frame = +2

Query: 143 ISYLISCGLSPAAAGAVTTSQHLRIRSTDKADAVRALLRHYGFADADIVRALRSASV 313
           I+  I CG      GAV +S   RI       AVR +L  YG  D D++  + ++ V
Sbjct: 68  ITVPILCGSIMLQDGAVASSHFERIEG-----AVRPILDRYGIRDGDVLVVVSNSGV 119

>TPIS1_RHILO (Q98ME7) Triosephosphate isomerase 1 (EC 5.3.1.1) (TIM 1)|
           (Triose-phosphate isomerase 1)
          Length = 256

 Score = 28.9 bits (63), Expect = 5.9
 Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
 Frame = +2

Query: 101 AVSKVPNSEPCRDTISY----LISCGLSPAAAGAVTTSQHLRIRSTDKADAVRALLR 259
           A S  P++ P    I+Y     I  GL+P AA       H+R R ++K  A  A  R
Sbjct: 152 AGSVPPSATPSNTVIAYEPVWAIGTGLTPTAADVAEAHAHIRERLSEKLGASAAKTR 208

>BAT2_MOUSE (Q7TSC1) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2158

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +3

Query: 213 ASAPPTRPTLCAPSSGTMASPTLTSSGRCAA 305
           A APP +    APS G    PTL S G C A
Sbjct: 548 AQAPPVQ---AAPSPGVAPVPTLVSGGGCTA 575

>NFI_HALSA (Q9HS81) Endonuclease V (EC 3.1.21.7) (Deoxyinosine 3'endonuclease)|
           (Deoxyribonuclease V) (DNase V)
          Length = 246

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 2/72 (2%)
 Frame = -3

Query: 415 EEQRLSCELVGLEA*GGEKVELGAEDLFGVKDEKHRGAAQ--RPDDVSVGEAIVPEEGAH 242
           ++  L+ E +GL+   GE+  LG     G       G  Q  R D+VSV  A+   +GA 
Sbjct: 16  DDHGLTPERIGLDEPPGEQAALGGATTSGEAAPVVVGVDQAFRDDEVSVSAAVAIRDGAV 75

Query: 241 SVGLVGGADAEV 206
                G A  +V
Sbjct: 76  IERAAGNAPLDV 87

>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c|
           precursor
          Length = 943

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 19/78 (24%), Positives = 32/78 (41%)
 Frame = +3

Query: 207 TSASAPPTRPTLCAPSSGTMASPTLTSSGRCAAPRCFSSLTPNXXXXXXXXXXXXXXXXX 386
           TS+SA  +     + +S ++AS ++TSS   ++    SSL  +                 
Sbjct: 110 TSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLASSSTTSSSLASSSTNSTTS 169

Query: 387 XXXQLSLCSSHAASTSTS 440
                S  SS  +ST+ S
Sbjct: 170 ATPTSSATSSSLSSTAAS 187

>SRRM1_CHICK (Q5ZMJ9) Serine/arginine repetitive matrix protein 1|
          Length = 888

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 24/74 (32%), Positives = 30/74 (40%)
 Frame = +1

Query: 217 PLHRQGRRCARPPQALWLRRR*HRPGVAQRLGASRP*PRTDPPPQARLFRLPRLRDPQAR 396
           P  R+ RR   PP A   R     P   +R   S P  R+  PP       PR R P  R
Sbjct: 535 PSPRRRRRSPSPPPARRRRSPSPPPPPRRRRSPSLPRRRSPSPP-------PRRRSPSPR 587

Query: 397 N*AFAPRTQPRQAP 438
              ++P  Q R +P
Sbjct: 588 R--YSPPIQRRYSP 599

>CU067_HUMAN (P58512) Protein C21orf67|
          Length = 204

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 16/44 (36%), Positives = 21/44 (47%)
 Frame = -2

Query: 440 RGACRGCVRGAKAQLRACGSRSLGRRKSRAWGGGSVRGQGREAP 309
           RG CRGC   +      C S  LG   SR W   ++RG+ +  P
Sbjct: 116 RGCCRGCASFSPFPAPRCPSERLGAHSSR-W---AIRGRSKINP 155

>AB2BP_MOUSE (Q9D6J4) Amyloid beta A4 protein-binding family A member 2-binding|
           protein (X11L-binding protein 51) (mXB51)
          Length = 353

 Score = 28.5 bits (62), Expect = 7.7
 Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
 Frame = -2

Query: 407 KAQLRACGSRSLGRR--KSRAWG-----GGSVRGQGREAPRR 303
           KAQ R CGSR  GRR  +S +W      G S  G+  EA ++
Sbjct: 173 KAQSRPCGSRRAGRRALRSISWSPSWSPGSSDTGRSSEAEQQ 214


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,472,897
Number of Sequences: 219361
Number of extensions: 975797
Number of successful extensions: 3793
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3789
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2628831825
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)