>SPL11_ORYSA (Q64HA9) Spotted leaf protein 11 (Spotted leaf11) (Cell|
           death-related protein SPL11)
          Length = 694

 Score = 37.0 bits (84), Expect = 0.042
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 1/122 (0%)
 Frame = +3

Query: 15  NLLTVDRADKTLVNLESCEKNVRQMAENGXXXXXXXXXXEGSPDTQLSMAAYVGELVLTN 194
           +L T + A   L+NL   E N   +  +G           GS + + + AA +  L + +
Sbjct: 422 DLRTQEHAVTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVID 481

Query: 195 DVKVFVA-QTAGSALVNIMKSGNREAREAALKALNQISSYDVSAKILIEAGILPPLIADL 371
           + KV +    A  ALV ++  G++  ++ A  AL  +  Y  +    I AG++ PLI  L
Sbjct: 482 EYKVTIGGMGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLV-PLIMGL 540

Query: 372 FT 377
            T
Sbjct: 541 VT 542

>IMA1_SCHPO (O14063) Importin alpha subunit (Karyopherin alpha subunit)|
           (Serine-rich RNA polymerase I suppressor protein) (Cell
           untimely torn protein 15)
          Length = 542

 Score = 35.8 bits (81), Expect = 0.093
 Identities = 31/110 (28%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
 Frame = +3

Query: 141 PDTQLSMAAY--VGELVLTNDVKVFVAQTAG--SALVNIMKSGNREAREAALKALNQISS 308
           P  Q+   A   VG +V  +DV+  V    G  SAL++++ S     R+ A   ++ I++
Sbjct: 302 PSAQVQTPALRSVGNIVTGDDVQTQVIINCGALSALLSLLSSPRDGVRKEACWTISNITA 361

Query: 309 YDVSA-KILIEAGILPPLIADLFTVGSNQLPMRLKEVSATILANVVASGA 455
            + S  + +IEA I+PPLI  L T        ++++ +   ++N  + GA
Sbjct: 362 GNSSQIQYVIEANIIPPLIHLLTTA-----DFKIQKEACWAISNATSGGA 406

>VAC8_YEAST (P39968) Vacuolar protein 8|
          Length = 577

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
 Frame = +3

Query: 3   SKIENLLTVDRADKTLVNLESCEKNVRQMAENGXXXXXXXXXXEGSPDTQLSMAAYVGEL 182
           +K +++     A   L+N+   E+N +++   G             PD Q      +  +
Sbjct: 175 AKSKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLLSSTDPDVQYYCTTALSNI 234

Query: 183 VLTNDVKVFVAQTAG---SALVNIMKSGNREAREAALKALNQISSYDVSAKI-LIEAGIL 350
            +    +  +AQT     S LV++M S +   +  A  AL  ++S D S ++ ++ AG L
Sbjct: 235 AVDEANRKKLAQTEPRLVSKLVSLMDSPSSRVKCQATLALRNLAS-DTSYQLEIVRAGGL 293

Query: 351 PPLIADLFTVGSNQLPMRLKEVS 419
           P L+     + S+ +P+ L  V+
Sbjct: 294 PHLVK---LIQSDSIPLVLASVA 313

>IMA_LYCES (O22478) Importin alpha subunit (Karyopherin alpha subunit) (KAP|
           alpha)
          Length = 527

 Score = 33.5 bits (75), Expect = 0.46
 Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 4/133 (3%)
 Frame = +3

Query: 78  VRQMAENGXXXXXXXXXXEGSPDTQLSMAAYVGELVLTNDVK--VFVAQTAGSALVNIMK 251
           ++ + E G            SP   +     VG +V  +D++  V +   A   LVN++ 
Sbjct: 278 IQAVIEAGVCSRLVELLLHSSPSVLIPALRTVGNIVTGDDIQTQVMIDHHALPCLVNLLT 337

Query: 252 SGNREA--REAALKALNQISSYDVSAKILIEAGILPPLIADLFTVGSNQLPMRLKEVSAT 425
              +++  +EA     N  +      +I+IEAGI+ PL+  L           +K+ +A 
Sbjct: 338 QNYKKSIKKEACWTISNITAGNRNQIQIVIEAGIIAPLVYLL-----QNAEFEIKKEAAW 392

Query: 426 ILANVVASGANFQ 464
            ++N  + G + Q
Sbjct: 393 AISNATSGGNHDQ 405

>PUB14_ARATH (Q8VZ40) E3 ubiquitin ligase PUB14 (EC 6.3.2.-) (Prototypical U-box|
           domain protein 14)
          Length = 632

 Score = 30.8 bits (68), Expect = 3.0
 Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 1/166 (0%)
 Frame = +3

Query: 87  MAENGXXXXXXXXXXEGSPDTQL-SMAAYVGELVLTNDVKVFVAQTAGSALVNIMKSGNR 263
           +AE G             P TQ  S+ A +   +   +    V   A + +V ++K+G+ 
Sbjct: 383 IAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLKNGSM 442

Query: 264 EAREAALKALNQISSYDVSAKILIEAGILPPLIADLFTVGSNQLPMRLKEVSATILANVV 443
           EARE A   L  +S  D +   +  AG +  LI+ L   G+     R K+ +AT + N+ 
Sbjct: 443 EARENAAATLFSLSVIDENKVAIGAAGAIQALIS-LLEEGTR----RGKKDAATAIFNLC 497

Query: 444 ASGANFQSIPLDHNRQTLVSEEIVHNLLHLISNTGPATECKLLQVL 581
                        N+   V   IV  L  L+ + G     + L +L
Sbjct: 498 I---------YQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAIL 534

>ATR_ORYSA (Q5Z987) Serine/threonine-protein kinase ATR (EC 2.7.11.1)|
          Length = 2710

 Score = 30.4 bits (67), Expect = 3.9
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = -3

Query: 510  FLQIPVSACCGQVEWTENLHLMPQHLQELLLT 415
            F  +P++  CG VEW  N   + Q LQ++ +T
Sbjct: 2437 FAVVPLTEDCGMVEWVPNTRGLRQILQDIYIT 2468

>SYFB_LACLA (Q9CEB5) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 797

 Score = 29.6 bits (65), Expect = 6.7
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 1/117 (0%)
 Frame = +3

Query: 180 LVLTNDVKVFVAQTAGSALVNIMKSGNREAREAALKALNQISSYDVSAKILIEAGILPPL 359
           LV       FV Q   + L+  M    +  R   +  L  I +Y+ + K    A +    
Sbjct: 520 LVTPEKATEFVGQLETTTLMMPMTEDRQTLRANMIPGLLDIVNYNQNRK---NADVAIYE 576

Query: 360 IADLFTVGSNQL-PMRLKEVSATILANVVASGANFQSIPLDHNRQTLVSEEIVHNLL 527
           I ++F    + + P+ +  ++  I  NVV    N Q++P+D       ++ IV NLL
Sbjct: 577 IGNIFLPNPDDIRPIEVPNLAFAISGNVVDKSYNGQAVPVDF----YYAKGIVENLL 629

>ODP2_ZYMMO (O66119) Dihydrolipoyllysine-residue acetyltransferase component of|
           pyruvate dehydrogenase complex (EC 2.3.1.12) (E2)
           (Dihydrolipoamide acetyltransferase component of
           pyruvate dehydrogenase complex)
          Length = 440

 Score = 29.3 bits (64), Expect = 8.7
 Identities = 19/93 (20%), Positives = 40/93 (43%)
 Frame = +3

Query: 144 DTQLSMAAYVGELVLTNDVKVFVAQTAGSALVNIMKSGNREAREAALKALNQISSYDVSA 323
           D  L + + + E +   ++K+ V      A    +K+            + Q S  D+S 
Sbjct: 248 DALLKLRSELNESLAVQNIKISVNDMLIKAQALALKATPNVNVAFDGDQMLQFSQADISV 307

Query: 324 KILIEAGILPPLIADLFTVGSNQLPMRLKEVSA 422
            + +E G++ P++    T   + L + +KE+ A
Sbjct: 308 AVSVEGGLITPILKQADTKSLSALSVEMKELIA 340


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,792,184
Number of Sequences: 219361
Number of extensions: 1571212
Number of successful extensions: 3992
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3863
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3992
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5044307840
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)