ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8f05 |
|---|---|
| Clone Library Name | barley_pub |
>MYB_CHICK (P01103) Myb proto-oncogene protein (C-myb)| Length = 641 Score = 37.7 bits (86), Expect = 0.026 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 3/101 (2%) Frame = +3 Query: 294 EESPEKMGHGYLSDGLMGRAQERKKG-VPWTEDEHRRFLAGLEKLGKGDWRGISRHFVTT 470 EE E H Y DGL+ +A +R G WT +E + +E+ G DW+ I+ F+ Sbjct: 16 EEDVEMYDHDY--DGLLPKAGKRHLGKTRWTREEDEKLKKLVEQNGTEDWKVIA-SFLPN 72 Query: 471 RTPTQVASHAQKYFLRQ--AGLAQKKRRSSLFDVVEKNGDR 587 RT Q QK + G K+ + ++V+K G + Sbjct: 73 RTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPK 113
>RERE_HUMAN (Q9P2R6) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-like protein) (Atrophin-1-related protein) Length = 1566 Score = 37.0 bits (84), Expect = 0.044 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 21/91 (23%) Frame = +3 Query: 345 GRAQER--KKGVP------WTEDEHRRFLAGLEKLGKGDWR-------------GISRHF 461 G+A +R KK VP WTEDE +RF+ GL + GK +R I+ ++ Sbjct: 377 GKALQRLVKKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYY 436 Query: 462 VTTRTPTQVASHAQKYFLRQAGLAQKKRRSS 554 +TP +S A + RQA + K R++ Sbjct: 437 YWKKTPEAASSRAHRRHRRQAVFRRIKTRTA 467
>RERE_MOUSE (Q80TZ9) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-2) Length = 1558 Score = 37.0 bits (84), Expect = 0.044 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 21/91 (23%) Frame = +3 Query: 345 GRAQER--KKGVP------WTEDEHRRFLAGLEKLGKGDWR-------------GISRHF 461 G+A +R KK VP WTEDE +RF+ GL + GK +R I+ ++ Sbjct: 377 GKALQRLVKKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPSKETGELITFYY 436 Query: 462 VTTRTPTQVASHAQKYFLRQAGLAQKKRRSS 554 +TP +S A + RQA + K R++ Sbjct: 437 YWKKTPEAASSRAHRRHRRQAVFRRIKTRTA 467
>RERE_RAT (Q62901) Arginine-glutamic acid dipeptide repeats protein| (Atrophin-1-related protein) Length = 1559 Score = 37.0 bits (84), Expect = 0.044 Identities = 29/91 (31%), Positives = 44/91 (48%), Gaps = 21/91 (23%) Frame = +3 Query: 345 GRAQER--KKGVP------WTEDEHRRFLAGLEKLGKGDWR-------------GISRHF 461 G+A +R KK VP WTEDE +RF+ GL + GK +R I+ ++ Sbjct: 376 GKALQRLVKKPVPKLIEKCWTEDEVKRFVKGLRQYGKNFFRIRKELLPNKETGELITFYY 435 Query: 462 VTTRTPTQVASHAQKYFLRQAGLAQKKRRSS 554 +TP +S A + RQA + K R++ Sbjct: 436 YWKKTPEAASSRAHRRHRRQAVFRRIKTRTA 466
>TERF2_HUMAN (Q15554) Telomeric repeat-binding factor 2 (TTAGGG repeat-binding| factor 2) (Telomeric DNA-binding protein) Length = 500 Score = 31.2 bits (69), Expect(2) = 0.076 Identities = 11/28 (39%), Positives = 19/28 (67%) Frame = +3 Query: 378 WTEDEHRRFLAGLEKLGKGDWRGISRHF 461 WT +E AG++K G+G+W IS+++ Sbjct: 450 WTVEESEWVKAGVQKYGEGNWAAISKNY 477 Score = 23.9 bits (50), Expect(2) = 0.076 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = +2 Query: 302 PGEDGPRVPLGRTHGQGSGEEE 367 PGE P+VP G+ + EE+ Sbjct: 399 PGEKNPKVPKGKWNSSNGVEEK 420
>MYB_BOVIN (P46200) Myb proto-oncogene protein (C-myb)| Length = 640 Score = 35.0 bits (79), Expect = 0.17 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Frame = +3 Query: 294 EESPEKMGHGYLSDGLMGRAQERKKG-VPWTEDEHRRFLAGLEKLGKGDWRGISRHFVTT 470 +E E H Y DGL+ ++ +R G WT +E + +E+ G DW+ I+ +++ Sbjct: 16 DEDIEMCDHDY--DGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIA-NYLPN 72 Query: 471 RTPTQVASHAQKYFLRQ--AGLAQKKRRSSLFDVVEKNGDR 587 RT Q QK + G K+ + ++V+K G + Sbjct: 73 RTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPK 113
>MYB_MOUSE (P06876) Myb proto-oncogene protein (C-myb)| Length = 636 Score = 35.0 bits (79), Expect = 0.17 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Frame = +3 Query: 294 EESPEKMGHGYLSDGLMGRAQERKKG-VPWTEDEHRRFLAGLEKLGKGDWRGISRHFVTT 470 +E E H Y DGL+ ++ +R G WT +E + +E+ G DW+ I+ +++ Sbjct: 16 DEDIEMCDHDY--DGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIA-NYLPN 72 Query: 471 RTPTQVASHAQKYFLRQ--AGLAQKKRRSSLFDVVEKNGDR 587 RT Q QK + G K+ + ++V+K G + Sbjct: 73 RTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPK 113
>MYB_HUMAN (P10242) Myb proto-oncogene protein (C-myb)| Length = 640 Score = 34.7 bits (78), Expect = 0.22 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 3/101 (2%) Frame = +3 Query: 294 EESPEKMGHGYLSDGLMGRAQERKKG-VPWTEDEHRRFLAGLEKLGKGDWRGISRHFVTT 470 +E E H Y DGL+ ++ +R G WT +E + +E+ G DW+ I+ +++ Sbjct: 16 DEDFEMCDHDY--DGLLPKSGKRHLGKTRWTREEDEKLKKLVEQNGTDDWKVIA-NYLPN 72 Query: 471 RTPTQVASHAQKYFLRQ--AGLAQKKRRSSLFDVVEKNGDR 587 RT Q QK + G K+ + ++V+K G + Sbjct: 73 RTDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVQKYGPK 113
>MYB1_NEUCR (O13493) Myb-like DNA binding protein myb-1| Length = 324 Score = 33.5 bits (75), Expect = 0.49 Identities = 16/48 (33%), Positives = 29/48 (60%) Frame = +3 Query: 342 MGRAQERKKGVPWTEDEHRRFLAGLEKLGKGDWRGISRHFVTTRTPTQ 485 M ++++G PW+ E +R + ++ LG G+W ++R + TRTP Q Sbjct: 1 MSNMPDQRRG-PWSAGEDQRLIKLVKDLGPGNWVNVAR-ILGTRTPKQ 46
>APRR2_ARATH (Q6LA43) Two-component response regulator-like APRR2| (Pseudo-response regulator 2) (TOC2 protein) Length = 535 Score = 32.7 bits (73), Expect = 0.84 Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Frame = +3 Query: 345 GRAQERKKGVPWTEDEHRRFLAGLEKLGKGD---WRGISRHFVTTRTPTQVASHAQKY 509 G RKK V WT + H++F+ +E+LG R + V T T VASH QK+ Sbjct: 291 GNKTSRKK-VDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQKF 347
>MYBB_HUMAN (P10244) Myb-related protein B (B-Myb)| Length = 700 Score = 32.0 bits (71), Expect = 1.4 Identities = 22/95 (23%), Positives = 42/95 (44%), Gaps = 6/95 (6%) Frame = +3 Query: 330 SDGLMGRAQERKKGVPWTEDEHRRFLAGLEKLGKGDWRGISRHFVTTRTPTQVASHAQKY 509 +D + ++ K V WT +E + A + + G+ DW+ ++ HF P + Q Sbjct: 18 TDSDVPEQRDSKCKVKWTHEEDEQLRALVRQFGQQDWKFLASHF-----PNRTDQQCQYR 72 Query: 510 FLR------QAGLAQKKRRSSLFDVVEKNGDRATT 596 +LR G K+ + ++V+K G + T Sbjct: 73 WLRVLNPDLVKGPWTKEEDQKVIELVKKYGTKQWT 107
>MYB_XENLA (Q08759) Myb protein| Length = 624 Score = 31.6 bits (70), Expect = 1.9 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 2/100 (2%) Frame = +3 Query: 294 EESPEKMGHGYLSDGLMGRAQERKKGVPWTEDEHRRFLAGLEKLGKGDWRGISRHFVTTR 473 ++ E H Y DGL+ + + WT +E + +E+ G +W+ I+ F+ R Sbjct: 14 DDEIEMYEHDY--DGLLSKGKRHLGKTRWTREEDEKLKKLVEQNGTEEWKVIA-SFLPNR 70 Query: 474 TPTQVASHAQKYFLRQ--AGLAQKKRRSSLFDVVEKNGDR 587 T Q QK + G K+ + ++V K G + Sbjct: 71 TDVQCQHRWQKVLNPELIKGPWTKEEDQRVIELVHKYGPK 110
>COT1_MOUSE (Q60632) COUP transcription factor 1 (COUP-TF1) (COUP-TF I)| Length = 422 Score = 31.6 bits (70), Expect = 1.9 Identities = 13/39 (33%), Positives = 19/39 (48%) Frame = +2 Query: 302 PGEDGPRVPLGRTHGQGSGEEERGSMD*GRAPEVPGRPG 418 PG P R G G+GE+++ P+ PG+PG Sbjct: 20 PGGPNPAAQAARGGGGGAGEQQQAGSGAPHTPQTPGQPG 58
>GRP2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b)| Length = 201 Score = 31.2 bits (69), Expect = 2.4 Identities = 15/32 (46%), Positives = 16/32 (50%) Frame = +3 Query: 24 GIGMARKCSSCGHNGHNSRTCSGHRGLESGGG 119 G G C CG GH +R CS G SGGG Sbjct: 131 GGGGDNSCFKCGEPGHMARECSQGGGGYSGGG 162
>MYBB_MOUSE (P48972) Myb-related protein B (B-Myb)| Length = 704 Score = 31.2 bits (69), Expect = 2.4 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 6/106 (5%) Frame = +3 Query: 297 ESPEKMGHGYLSDGLMGRAQERKKGVPWTEDEHRRFLAGLEKLGKGDWRGISRHFVTTRT 476 E +++ + + L+ + R K V WT +E + A + + G+ DW+ ++ HF Sbjct: 8 EDLDELHYQDVDSDLLEQRDNRCK-VKWTHEEDEQLRALVRQFGQQDWKFLASHF----- 61 Query: 477 PTQVASHAQKYFLR------QAGLAQKKRRSSLFDVVEKNGDRATT 596 P + Q +LR G K+ + ++V+K G + T Sbjct: 62 PNRTDQQCQYRWLRVLNPDLVKGPWTKEEDQKVIELVKKYGTKQWT 107
>YD3A_SCHPO (Q10274) Hypothetical protein C13G7.10 in chromosome I| Length = 390 Score = 30.8 bits (68), Expect = 3.2 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 3/46 (6%) Frame = +3 Query: 360 RKKGVPWTEDEHRRFLAGLEKLGKGDWRGI---SRHFVTTRTPTQV 488 RK V WTE E L G + G G+W+ I R T R+P + Sbjct: 52 RKPRVKWTEKETNDLLRGCQIHGVGNWKKILLDERFHFTNRSPNDL 97
>RMT2_GIBZE (Q4IQK7) Arginine N-methyltransferase 2 (EC 2.1.1.-)| Length = 425 Score = 30.8 bits (68), Expect = 3.2 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = +3 Query: 372 VPWTEDEHRRFLAGLEKLGKGDWRGISRHFVT 467 V W E + ++GLEK G+G+W G+ R + T Sbjct: 389 VEWEESDVD--MSGLEKAGEGEWEGVRRRYWT 418
>MYB4_ORYSA (Q7XBH4) Myb-related protein Myb4 (OsMyb4) (Transcription factor| RLTR1) Length = 257 Score = 30.8 bits (68), Expect = 3.2 Identities = 12/31 (38%), Positives = 21/31 (67%) Frame = +3 Query: 363 KKGVPWTEDEHRRFLAGLEKLGKGDWRGISR 455 KKG PWT +E + +A +++ G G+WR + + Sbjct: 13 KKG-PWTPEEDKVLVAHIQRHGHGNWRALPK 42
>GAG_CAEVC (P33458) Gag polyprotein [Contains: Core protein p16; Core protein| p25; Core protein p14] Length = 441 Score = 30.8 bits (68), Expect = 3.2 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +3 Query: 45 CSSCGHNGHNSRTCSGHR---GLESGGGLRLFGVQLQVGAAPLK 167 C +CG GH + C G R G + G G R G+++ A P++ Sbjct: 400 CHNCGKRGHMQKECRGKRDIRGKQQGNGRR--GIRVVPSAPPME 441
>ARR12_ARATH (P62598) Two-component response regulator ARR12| Length = 596 Score = 30.4 bits (67), Expect = 4.2 Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 6/68 (8%) Frame = +3 Query: 357 ERKKGVPWTEDEHRRFLAGLEKLG---KGDWRGISRHFVTTRTPTQVASHAQK---YFLR 518 ++K+ V WT + H++F+A + +LG + + V T VASH QK Y R Sbjct: 193 QKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKR 252 Query: 519 QAGLAQKK 542 +G+A ++ Sbjct: 253 ISGVANQQ 260
>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6| Length = 551 Score = 30.4 bits (67), Expect = 4.2 Identities = 20/51 (39%), Positives = 21/51 (41%) Frame = -3 Query: 467 GDEVPGDASPVAFPELLQAGQEPPVLVLSPWNPFLPLLSPAHESVREVPVA 315 GD PG A P P AGQ PP L P P P P V P+A Sbjct: 214 GDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLA 264
>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6| (Cleavage and polyadenylation specificity factor 68 kDa subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor Im 68-kDa subunit) (Protein HPBRII-4/7) Length = 551 Score = 30.4 bits (67), Expect = 4.2 Identities = 20/51 (39%), Positives = 21/51 (41%) Frame = -3 Query: 467 GDEVPGDASPVAFPELLQAGQEPPVLVLSPWNPFLPLLSPAHESVREVPVA 315 GD PG A P P AGQ PP L P P P P V P+A Sbjct: 214 GDRFPGPAGPGGPPPPFPAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLA 264
>ARR10_ARATH (O49397) Two-component response regulator ARR10 (Receiver-like| protein 4) Length = 552 Score = 30.4 bits (67), Expect = 4.2 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = +3 Query: 357 ERKKGVPWTEDEHRRFLAGLEKLGKGDWRGISRHF-----VTTRTPTQVASHAQKY 509 ++K V WT + H +FLA ++ LG R + + V T VASH QK+ Sbjct: 181 QKKPRVLWTHELHNKFLAAVDHLGVE--RAVPKKILDLMNVDKLTRENVASHLQKF 234
>FOXD2_HUMAN (O60548) Forkhead box protein D2 (Forkhead-related protein FKHL17)| (Forkhead-related transcription factor 9) (FREAC-9) Length = 497 Score = 30.0 bits (66), Expect = 5.4 Identities = 22/69 (31%), Positives = 31/69 (44%) Frame = -3 Query: 602 TLGGCSVAILLDHVEEAGAPLLLREAGLPEEVLLGVAGHLRRRARGDEVPGDASPVAFPE 423 TLG C I+ +P L EA +V+ G +G G E+P + P A + Sbjct: 2 TLGSCCCEIM----SSESSPAALSEADADIDVVGGGSG-------GGELPARSGPRAPRD 50 Query: 422 LLQAGQEPP 396 +L G EPP Sbjct: 51 VLPHGHEPP 59
>GRP2_NICSY (P27484) Glycine-rich protein 2| Length = 214 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/37 (43%), Positives = 18/37 (48%) Frame = +3 Query: 24 GIGMARKCSSCGHNGHNSRTCSGHRGLESGGGLRLFG 134 G G C CG +GH +R CS G GGG R G Sbjct: 152 GSGGGSGCFKCGESGHFARDCSQSGG--GGGGGRFGG 186
>ZCHC9_HUMAN (Q8N567) Zinc finger CCHC domain-containing protein 9| Length = 271 Score = 30.0 bits (66), Expect = 5.4 Identities = 16/33 (48%), Positives = 20/33 (60%), Gaps = 2/33 (6%) Frame = +3 Query: 42 KCSSCGHNGHNSRTCSGH-RGL-ESGGGLRLFG 134 KC CG GH SR+C + +GL GGG +L G Sbjct: 185 KCFVCGEMGHLSRSCPDNPKGLYADGGGCKLCG 217
>HEXP_LEIMA (Q04832) DNA-binding protein HEXBP (Hexamer-binding protein)| Length = 271 Score = 30.0 bits (66), Expect = 5.4 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +3 Query: 39 RKCSSCGHNGHNSRTCSGHRGLESGGGLR 125 R C CG GH SR C +G SG G R Sbjct: 168 RTCYKCGDAGHISRDCPNGQGGYSGAGDR 196 Score = 30.0 bits (66), Expect = 5.4 Identities = 14/29 (48%), Positives = 15/29 (51%) Frame = +3 Query: 39 RKCSSCGHNGHNSRTCSGHRGLESGGGLR 125 R C CG GH SR C +G SG G R Sbjct: 140 RTCYKCGDAGHISRDCPNGQGGYSGAGDR 168 Score = 29.3 bits (64), Expect = 9.3 Identities = 12/25 (48%), Positives = 13/25 (52%) Frame = +3 Query: 39 RKCSSCGHNGHNSRTCSGHRGLESG 113 RKC CG +GH SR C SG Sbjct: 196 RKCYKCGESGHMSRECPSAGSTGSG 220 Score = 29.3 bits (64), Expect = 9.3 Identities = 12/31 (38%), Positives = 14/31 (45%) Frame = +3 Query: 24 GIGMARKCSSCGHNGHNSRTCSGHRGLESGG 116 G +C CG GH SR C +G GG Sbjct: 92 GAAKGFECYKCGQEGHLSRDCPSSQGGSRGG 122
>ARR21_ARATH (Q9LYP5) Putative two-component response regulator ARR21| Length = 592 Score = 30.0 bits (66), Expect = 5.4 Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 3/88 (3%) Frame = +3 Query: 309 KMGHGYLSDGLMGRAQERKKGVPWTEDEHRRFLAGLEKLGKG---DWRGISRHFVTTRTP 479 K G DG +KK + WT+ H FL + +G + ++ V T Sbjct: 204 KPNGGPSDDGESMSQPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPYLTR 263 Query: 480 TQVASHAQKYFLRQAGLAQKKRRSSLFD 563 VASH QKY + +A++ S L D Sbjct: 264 ENVASHLQKYRIFLRRVAEQGLYSMLSD 291
>TERF1_MOUSE (P70371) Telomeric repeat-binding factor 1 (TTAGGG repeat-binding| factor 1) Length = 421 Score = 30.0 bits (66), Expect = 5.4 Identities = 12/34 (35%), Positives = 19/34 (55%) Frame = +3 Query: 360 RKKGVPWTEDEHRRFLAGLEKLGKGDWRGISRHF 461 R+K W +E R G++K G+G+W I H+ Sbjct: 364 RRKRQTWLWEEDRILKCGVKKYGEGNWAKILSHY 397
>ATG23_KLULA (Q6CWA7) Autophagy-related protein 23| Length = 426 Score = 29.6 bits (65), Expect = 7.1 Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 6/55 (10%) Frame = -3 Query: 464 DEVPGDASPVAF------PELLQAGQEPPVLVLSPWNPFLPLLSPAHESVREVPV 318 DE+ G P+ PELLQ G+ PP + LS S HES + P+ Sbjct: 371 DELNGKMQPIPIKSSAKTPELLQMGKSPPKVALSK-----EYASNLHESTEDFPL 420
>YR029_MIMIV (Q5UPA8) Hypothetical protein R29| Length = 108 Score = 29.3 bits (64), Expect = 9.3 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 4/38 (10%) Frame = +3 Query: 30 GMARKCSSCGHNGH----NSRTCSGHRGLESGGGLRLF 131 G R+CS+CGH+ H N HR +ES LR F Sbjct: 55 GRIRRCSNCGHDLHGGIANKIETVVHRDIESDKMLRRF 92
>RL15_BACSU (P19946) 50S ribosomal protein L15| Length = 146 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +3 Query: 9 NLVCRGIGMAR-KCSSCGHNGHNSRTCSGHRGLESGGGLRLF 131 N V RGIG K + GH G N+R+ G R GG + LF Sbjct: 17 NRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLF 58
>RL15_BACLD (P35138) 50S ribosomal protein L15| Length = 146 Score = 29.3 bits (64), Expect = 9.3 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +3 Query: 9 NLVCRGIGMAR-KCSSCGHNGHNSRTCSGHRGLESGGGLRLF 131 N V RGIG K + GH G N+R+ G R GG + LF Sbjct: 17 NRVGRGIGSGNGKTAGKGHKGQNARSGGGVRPGFEGGQMPLF 58
>RL15_BUCBP (Q89A84) 50S ribosomal protein L15| Length = 147 Score = 29.3 bits (64), Expect = 9.3 Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%) Frame = +3 Query: 6 SNLVCRGIGMA-RKCSSCGHNGHNSRT-CSGHRGLESGGGLRLFGVQLQVGAAPLKK 170 S V RGIG K S GH G SR+ C RG E GG + L+ + G LKK Sbjct: 16 SKRVGRGIGSGFGKTSGRGHKGQKSRSGCKIRRGFE-GGQMPLYRRIPKFGFVSLKK 71
>ARR19_ARATH (Q9M9B9) Putative two-component response regulator ARR19| Length = 407 Score = 29.3 bits (64), Expect = 9.3 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 7/57 (12%) Frame = +3 Query: 360 RKKGVPWTEDEHRRFLAGLEKLG---KGDWRGISRHFVTTR----TPTQVASHAQKY 509 RK + WTE+ H++FL +E +G K + + + R T + VASH QK+ Sbjct: 214 RKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKH 270 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,220,349 Number of Sequences: 219361 Number of extensions: 1047150 Number of successful extensions: 5083 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4465 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5068 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5367617986 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
