>CO8A_RABIT (P98136) Complement component C8 alpha chain precursor (Complement|
           component 8 alpha subunit)
          Length = 585

 Score = 34.3 bits (77), Expect = 0.30
 Identities = 21/64 (32%), Positives = 27/64 (42%), Gaps = 9/64 (14%)
 Frame = +3

Query: 390 CMHARTIESNMCI*CTYVIY*HR-VYMVRSFGG--------DTANCFVPFACIKPAATGQ 542
           C  +   E   C  C    Y HR +     FGG        D A+C+ P AC++PA  GQ
Sbjct: 39  CQLSSWSEWTDCFPCQDTKYRHRSLLQPNKFGGTICSGDIWDRASCYSPTACLRPAQCGQ 98

Query: 543 CIMC 554
              C
Sbjct: 99  DFQC 102

>COFG_METMP (Q6LYV9) FO synthase subunit 1 (EC 2.5.1.-)|
           (7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
           subunit 1)
          Length = 352

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 17/67 (25%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -3

Query: 617 FLMNKSVH--LTQLVNVPIDRTQAHYTLSSGRRLDACEWHEAVCSISTKRPNHIHSVLVD 444
           FL + S +  L +L  +  + T  H T S    +  C W   VC   T R  +   + +D
Sbjct: 10  FLKSNSTNSILEKLGKINAENTSKHVTFSKNAFIPVCNWCRNVCGYCTFRNENFKLLKMD 69

Query: 443 HIRTLYT 423
            ++ + T
Sbjct: 70  EMKEILT 76

>CO4A2_HUMAN (P08572) Collagen alpha-2(IV) chain precursor|
          Length = 1712

 Score = 29.6 bits (65), Expect = 7.5
 Identities = 9/19 (47%), Positives = 15/19 (78%)
 Frame = +2

Query: 98  PRSWKGEAGACRASDDNQA 154
           P+ WKG+AG CR ++ ++A
Sbjct: 473 PKGWKGDAGECRCTEGDEA 491


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,875,402
Number of Sequences: 219361
Number of extensions: 1394865
Number of successful extensions: 3529
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3526
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5653129581
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)