ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7p20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-prote... 287 8e-75
2dbj|AK120503.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 8e-66
3dbj|AK100602.1| Oryza sativa (japonica cultivar-group) cDNA clon... 258 8e-66
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 176 2e-41
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 176 2e-41
6emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb... 176 2e-41
7gb|BT024101.1| Zea mays clone EL01N0524E01 mRNA sequence 159 5e-36
8gb|AY107545.1| Zea mays PCO123571 mRNA sequence 159 5e-36
9gb|AY108560.1| Zea mays PCO140434 mRNA sequence 107 2e-20
10ref|XM_470503.1| Oryza sativa (japonica cultivar-group), mRNA 86 6e-14
11gb|AY224481.1| Oryza sativa (japonica cultivar-group) isolate 29... 86 6e-14
12gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 74 2e-10
13gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genom... 74 2e-10
14dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 74 2e-10
15gb|AC068533.7| Homo sapiens PAC clone RP5-1132H15 from 7, comple... 46 0.054
16gb|BT014158.1| Lycopersicon esculentum clone 133278F, mRNA sequence 44 0.21
17emb|AL133293.28| Human DNA sequence from clone RP5-823N20 on chr... 44 0.21
18emb|Z27222.1|BNPLCAS B.napus mRNA for plastid chaperonin-60 alph... 44 0.21
19gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 42 0.84
20gb|AC159972.5| Mus musculus chromosome 1, clone RP23-35D23, comp... 42 0.84
21gb|BC055915.1| Mus musculus centrosome and spindle pole associat... 42 0.84
22ref|XM_985768.1| PREDICTED: Mus musculus centrosome and spindle ... 42 0.84
23ref|XM_913097.2| PREDICTED: Mus musculus centrosome and spindle ... 42 0.84
24ref|XM_129366.7| PREDICTED: Mus musculus centrosome and spindle ... 42 0.84
25emb|X55394.3|MTMMOCLU Methylosinus trichosporium gene cluster fo... 42 0.84
26dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 42 0.84
27gb|AF451889.1| Actinomadura rubrobrunea strain IFO 14622 HSP70 g... 42 0.84
28gb|AF451888.1| Actinocorallia herbida strain IFO 15485 HSP70 gen... 42 0.84
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 0.84
30ref|XM_342793.2| PREDICTED: Rattus norvegicus similar to hypothe... 42 0.84
31emb|Z83115.1|CEK11D2 Caenorhabditis elegans Cosmid K11D2, comple... 42 0.84
32gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome... 42 0.84
33gb|AC162389.6| Mus musculus 6 BAC RP24-114M8 (Roswell Park Cance... 40 3.3
34gb|AC073422.8| Homo sapiens BAC clone RP11-535F1 from 7, complet... 40 3.3
35emb|AJ621256.1| Enterococcus canis partial GroEL gene for heat s... 40 3.3
36gb|AC091616.2| Rattus norvegicus strain Brown Norway clone RP31-... 40 3.3
37gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 3.3
38ref|XM_395705.2| PREDICTED: Apis mellifera similar to CG18497-PA... 40 3.3
39gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 3.3
40dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 3.3
41gb|AC145610.4| Mus musculus BAC clone RP24-281O20 from 18, compl... 40 3.3
42gb|AC149346.2| Phakopsora pachyrhizi clone JGIAFNA-33E14, comple... 40 3.3 
>emb|X07851.1|TARSBA Wheat mRNA for Rubisco subunit binding-protein alpha subunit
          Length = 1834

 Score =  287 bits (145), Expect = 8e-75
 Identities = 167/176 (94%)
 Strand = Plus / Plus

                                                                       
Query: 82  gcgcggacgccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcg 141
           |||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct: 2   gcgcggacgccaaggaaatcgccttcgaccagaagtcccgcgccgcgctccaggccggcg 61

                                                                       
Query: 142 tcnagaagctcgccaacgccgtcggngtcaccctcggcccgcgagggaggaatgtagtgc 201
           || |||||||||||||||||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 62  tcgagaagctcgccaacgccgtcggcgtcaccctcggcccgcgagggaggaacgtagtgc 121

                                                                   
Query: 202 tggatgagcatggnaaccccaaagnggtgaacgatggtgttaccattgcccgtgct 257
           |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 122 tggatgagtatggcaaccccaaagtggtgaacgatggtgttaccattgcccgtgct 177
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>dbj|AK120503.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013122K17, full
           insert sequence
          Length = 2070

 Score =  258 bits (130), Expect = 8e-66
 Identities = 221/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccgcctccctcctccgctccttctcctcccaggggaggctgaggaggtccaagaacggcc 60
           ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| || |
Sbjct: 113 ccgcctccctcctccgctctttctcctcccaggggagggtgaggagggccaagaatgggc 172

                                                                       
Query: 61  gttcgtcgcggctggtggtgcgcgcggacgccaaggagatngccttcgaccagaagtccc 120
           |  ||  |||||| |||||||| |||||||||||||| || |||||||||||||| ||||
Sbjct: 173 gggcgcagcggctagtggtgcgggcggacgccaaggacatcgccttcgaccagaaatccc 232

                                                                       
Query: 121 gggccgcgctccaggccggcgtcnagaagctcgccaacgccgtcggngtcaccctcggcc 180
           |||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||
Sbjct: 233 gggcggcgctccaggccggcgtcgagaagctcgccaacgccgttggcgtcaccctcggcc 292

                                                                       
Query: 181 cgcgagggaggaatgtagtgctggatgagcatggnaaccccaaagnggtgaacgatggtg 240
           | |||||||| || |||||||| |||||| | || |  ||||||| ||| || ||||| |
Sbjct: 293 cacgagggagaaacgtagtgcttgatgagtacggcagtcccaaagtggtaaatgatggag 352

                        
Query: 241 ttaccattgcccg 253
           | |||||||||||
Sbjct: 353 tcaccattgcccg 365
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>dbj|AK100602.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107D12, full
           insert sequence
          Length = 1985

 Score =  258 bits (130), Expect = 8e-66
 Identities = 221/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccgcctccctcctccgctccttctcctcccaggggaggctgaggaggtccaagaacggcc 60
           ||||||||||||||||||| |||||||||||||||||| |||||||| ||||||| || |
Sbjct: 113 ccgcctccctcctccgctctttctcctcccaggggagggtgaggagggccaagaatgggc 172

                                                                       
Query: 61  gttcgtcgcggctggtggtgcgcgcggacgccaaggagatngccttcgaccagaagtccc 120
           |  ||  |||||| |||||||| |||||||||||||| || |||||||||||||| ||||
Sbjct: 173 gggcgcagcggctagtggtgcgggcggacgccaaggacatcgccttcgaccagaaatccc 232

                                                                       
Query: 121 gggccgcgctccaggccggcgtcnagaagctcgccaacgccgtcggngtcaccctcggcc 180
           |||| |||||||||||||||||| ||||||||||||||||||| || |||||||||||||
Sbjct: 233 gggcggcgctccaggccggcgtcgagaagctcgccaacgccgttggcgtcaccctcggcc 292

                                                                       
Query: 181 cgcgagggaggaatgtagtgctggatgagcatggnaaccccaaagnggtgaacgatggtg 240
           | |||||||| || |||||||| |||||| | || |  ||||||| ||| || ||||| |
Sbjct: 293 cacgagggagaaacgtagtgcttgatgagtacggcagtcccaaagtggtaaatgatggag 352

                        
Query: 241 ttaccattgcccg 253
           | |||||||||||
Sbjct: 353 tcaccattgcccg 365
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  176 bits (89), Expect = 2e-41
 Identities = 140/158 (88%)
 Strand = Plus / Plus

                                                                            
Query: 30       caggggaggctgaggaggtccaagaacggccgttcgtcgcggctggtggtgcgcgcggac 89
                ||||||||| |||||||| ||||||| || ||  ||  |||||| |||||||| ||||||
Sbjct: 10293000 caggggagggtgaggagggccaagaatgggcgggcgcagcggctagtggtgcgggcggac 10293059

                                                                            
Query: 90       gccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcgtcnagaag 149
                |||||||| || |||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 10293060 gccaaggacatcgccttcgaccagaaatcccgggcggcgctccaggccggcgtcgagaag 10293119

                                                      
Query: 150      ctcgccaacgccgtcggngtcaccctcggcccgcgagg 187
                |||||||||||||| || |||||||||||||| |||||
Sbjct: 10293120 ctcgccaacgccgttggcgtcaccctcggcccacgagg 10293157



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                 
Query: 1        ccgcctccctcctccgctccttctcctcccagg 33
                ||||||||||||||||||| |||||||||||||
Sbjct: 10292734 ccgcctccctcctccgctctttctcctcccagg 10292766
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  176 bits (89), Expect = 2e-41
 Identities = 140/158 (88%)
 Strand = Plus / Plus

                                                                            
Query: 30       caggggaggctgaggaggtccaagaacggccgttcgtcgcggctggtggtgcgcgcggac 89
                ||||||||| |||||||| ||||||| || ||  ||  |||||| |||||||| ||||||
Sbjct: 10292882 caggggagggtgaggagggccaagaatgggcgggcgcagcggctagtggtgcgggcggac 10292941

                                                                            
Query: 90       gccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcgtcnagaag 149
                |||||||| || |||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 10292942 gccaaggacatcgccttcgaccagaaatcccgggcggcgctccaggccggcgtcgagaag 10293001

                                                      
Query: 150      ctcgccaacgccgtcggngtcaccctcggcccgcgagg 187
                |||||||||||||| || |||||||||||||| |||||
Sbjct: 10293002 ctcgccaacgccgttggcgtcaccctcggcccacgagg 10293039



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                                 
Query: 1        ccgcctccctcctccgctccttctcctcccagg 33
                ||||||||||||||||||| |||||||||||||
Sbjct: 10292616 ccgcctccctcctccgctctttctcctcccagg 10292648
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>emb|AL935069.5|CNS08CCL Oryza sativa chromosome 12, . BAC OSJNBb0115B15 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135439

 Score =  176 bits (89), Expect = 2e-41
 Identities = 140/158 (88%)
 Strand = Plus / Plus

                                                                         
Query: 30    caggggaggctgaggaggtccaagaacggccgttcgtcgcggctggtggtgcgcgcggac 89
             ||||||||| |||||||| ||||||| || ||  ||  |||||| |||||||| ||||||
Sbjct: 55919 caggggagggtgaggagggccaagaatgggcgggcgcagcggctagtggtgcgggcggac 55978

                                                                         
Query: 90    gccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcgtcnagaag 149
             |||||||| || |||||||||||||| |||||||| |||||||||||||||||| |||||
Sbjct: 55979 gccaaggacatcgccttcgaccagaaatcccgggcggcgctccaggccggcgtcgagaag 56038

                                                   
Query: 150   ctcgccaacgccgtcggngtcaccctcggcccgcgagg 187
             |||||||||||||| || |||||||||||||| |||||
Sbjct: 56039 ctcgccaacgccgttggcgtcaccctcggcccacgagg 56076



 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 32/33 (96%)
 Strand = Plus / Plus

                                              
Query: 1     ccgcctccctcctccgctccttctcctcccagg 33
             ||||||||||||||||||| |||||||||||||
Sbjct: 55653 ccgcctccctcctccgctctttctcctcccagg 55685
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>gb|BT024101.1| Zea mays clone EL01N0524E01 mRNA sequence
          Length = 2106

 Score =  159 bits (80), Expect = 5e-36
 Identities = 156/183 (85%)
 Strand = Plus / Plus

                                                                       
Query: 75  gtggtgcgcgcggacgccaaggagatngccttcgaccagaagtcccgggccgcgctccag 134
           |||||||| ||| ||||||| || || ||||| |||||||| ||| |||| ||||| |||
Sbjct: 190 gtggtgcgtgcgaacgccaaagacattgcctttgaccagaaatccagggcagcgctgcag 249

                                                                       
Query: 135 gccggcgtcnagaagctcgccaacgccgtcggngtcaccctcggcccgcgagggaggaat 194
           ||||||||| ||||||| || ||||||||||| ||||||||||| || ||||||||||||
Sbjct: 250 gccggcgtcgagaagctggcaaacgccgtcggtgtcaccctcgggccacgagggaggaat 309

                                                                       
Query: 195 gtagtgctggatgagcatggnaaccccaaagnggtgaacgatggtgttaccattgcccgt 254
           || ||||| |||||| | || ||||||||||  ||||| ||||| || || |||||||||
Sbjct: 310 gtggtgctcgatgagtacggcaaccccaaagttgtgaatgatggagtcactattgcccgt 369

              
Query: 255 gct 257
           |||
Sbjct: 370 gct 372
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>gb|AY107545.1| Zea mays PCO123571 mRNA sequence
          Length = 830

 Score =  159 bits (80), Expect = 5e-36
 Identities = 156/183 (85%)
 Strand = Plus / Plus

                                                                       
Query: 75  gtggtgcgcgcggacgccaaggagatngccttcgaccagaagtcccgggccgcgctccag 134
           |||||||| ||| ||||||| || || ||||| |||||||| ||| |||| ||||| |||
Sbjct: 173 gtggtgcgtgcgaacgccaaagacattgcctttgaccagaaatccagggcagcgctgcag 232

                                                                       
Query: 135 gccggcgtcnagaagctcgccaacgccgtcggngtcaccctcggcccgcgagggaggaat 194
           ||||||||| |||||||||| ||||||||||| ||||||||||| || ||||||||||||
Sbjct: 233 gccggcgtcgagaagctcgcaaacgccgtcggtgtcaccctcgggccacgagggaggaat 292

                                                                       
Query: 195 gtagtgctggatgagcatggnaaccccaaagnggtgaacgatggtgttaccattgcccgt 254
           || ||||| |||||| | || ||||| ||||  ||||| ||||| || || |||||||||
Sbjct: 293 gtggtgctcgatgagtacggaaaccctaaagttgtgaatgatggagtcactattgcccgt 352

              
Query: 255 gct 257
           |||
Sbjct: 353 gct 355
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>gb|AY108560.1| Zea mays PCO140434 mRNA sequence
          Length = 2143

 Score =  107 bits (54), Expect = 2e-20
 Identities = 136/165 (82%)
 Strand = Plus / Plus

                                                                       
Query: 89  cgccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcgtcnagaa 148
           |||||||||||| ||||| ||||||   ||| | ||||| || |||||||||||| ||||
Sbjct: 273 cgccaaggagatcgcctttgaccagggctccagagccgcccttcaggccggcgtcgagaa 332

                                                                       
Query: 149 gctcgccaacgccgtcggngtcaccctcggcccgcgagggaggaatgtagtgctggatga 208
           |||||||  ||| ||||| ||||||||||| ||  |||| |||||||| ||  |||||||
Sbjct: 333 gctcgccgccgcggtcggcgtcaccctcggacccagaggaaggaatgttgtcttggatga 392

                                                        
Query: 209 gcatggnaaccccaaagnggtgaacgatggtgttaccattgcccg 253
           |  ||| | |||||||| ||| || ||||| ||||||||||||||
Sbjct: 393 gtttggaacccccaaagtggtcaatgatggagttaccattgcccg 437
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>ref|XM_470503.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1998

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 131/162 (80%)
 Strand = Plus / Plus

                                                                       
Query: 89  cgccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcgtcnagaa 148
           |||||||||||| ||||||||||||   || ||  || | ||||||||||||||| ||||
Sbjct: 206 cgccaaggagatcgccttcgaccagggatcgcgatcctccctccaggccggcgtcgagaa 265

                                                                       
Query: 149 gctcgccaacgccgtcggngtcaccctcggcccgcgagggaggaatgtagtgctggatga 208
           |||||||  ||||||||  ||||||||||| ||  |||| || ||||| ||  |||||||
Sbjct: 266 gctcgccgccgccgtcgccgtcaccctcggtcccagaggaagaaatgtcgtcttggatga 325

                                                     
Query: 209 gcatggnaaccccaaagnggtgaacgatggtgttaccattgc 250
           |  ||| | |||||||| ||| || || || |||||||||||
Sbjct: 326 gtttgggagccccaaagtggtcaatgacggagttaccattgc 367
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>gb|AY224481.1| Oryza sativa (japonica cultivar-group) isolate 29884 putative
           chaperonin 60 alpha subunit mRNA, partial cds
          Length = 673

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 131/162 (80%)
 Strand = Plus / Plus

                                                                       
Query: 89  cgccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcgtcnagaa 148
           |||||||||||| ||||||||||||   || ||  || | ||||||||||||||| ||||
Sbjct: 192 cgccaaggagatcgccttcgaccagggatcgcgatcctccctccaggccggcgtcgagaa 251

                                                                       
Query: 149 gctcgccaacgccgtcggngtcaccctcggcccgcgagggaggaatgtagtgctggatga 208
           |||||||  ||||||||  ||||||||||| ||  |||| || ||||| ||  |||||||
Sbjct: 252 gctcgccgccgccgtcgccgtcaccctcggtcccagaggaagaaatgtcgtcttggatga 311

                                                     
Query: 209 gcatggnaaccccaaagnggtgaacgatggtgttaccattgc 250
           |  ||| | |||||||| ||| || || || |||||||||||
Sbjct: 312 gtttgggagccccaaagtggtcaatgacggagttaccattgc 353
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                            
Query: 89       cgccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcgtcnagaa 148
                |||||||||||| ||||||||||||   || ||  || | ||||||||||||||| ||||
Sbjct: 35980644 cgccaaggagatcgccttcgaccagggatcgcgatcctccctccaggccggcgtcgagaa 35980585

                                              
Query: 149      gctcgccaacgccgtcggngtcaccctcgg 178
                |||||||  ||||||||  |||||||||||
Sbjct: 35980584 gctcgccgccgccgtcgccgtcaccctcgg 35980555
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>gb|AC092263.7| Oryza sativa chromosome 3 BAC OSJNBa0033P04 genomic sequence, complete
             sequence
          Length = 164179

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                         
Query: 89    cgccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcgtcnagaa 148
             |||||||||||| ||||||||||||   || ||  || | ||||||||||||||| ||||
Sbjct: 42155 cgccaaggagatcgccttcgaccagggatcgcgatcctccctccaggccggcgtcgagaa 42096

                                           
Query: 149   gctcgccaacgccgtcggngtcaccctcgg 178
             |||||||  ||||||||  |||||||||||
Sbjct: 42095 gctcgccgccgccgtcgccgtcaccctcgg 42066
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 76/90 (84%)
 Strand = Plus / Minus

                                                                            
Query: 89       cgccaaggagatngccttcgaccagaagtcccgggccgcgctccaggccggcgtcnagaa 148
                |||||||||||| ||||||||||||   || ||  || | ||||||||||||||| ||||
Sbjct: 36070718 cgccaaggagatcgccttcgaccagggatcgcgatcctccctccaggccggcgtcgagaa 36070659

                                              
Query: 149      gctcgccaacgccgtcggngtcaccctcgg 178
                |||||||  ||||||||  |||||||||||
Sbjct: 36070658 gctcgccgccgccgtcgccgtcaccctcgg 36070629
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>gb|AC068533.7| Homo sapiens PAC clone RP5-1132H15 from 7, complete sequence
          Length = 140974

 Score = 46.1 bits (23), Expect = 0.054
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 8     cctcctccgctccttctcctccc 30
             |||||||||||||||||||||||
Sbjct: 59307 cctcctccgctccttctcctccc 59329



 Score = 46.1 bits (23), Expect = 0.054
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 8     cctcctccgctccttctcctccc 30
             |||||||||||||||||||||||
Sbjct: 59173 cctcctccgctccttctcctccc 59195
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>gb|BT014158.1| Lycopersicon esculentum clone 133278F, mRNA sequence
          Length = 2098

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 56/68 (82%)
 Strand = Plus / Plus

                                                                       
Query: 189 aggaatgtagtgctggatgagcatggnaaccccaaagnggtgaacgatggtgttaccatt 248
           |||||||||||| |||||||  |||| | ||| || | ||| |||||||| ||||| |||
Sbjct: 313 aggaatgtagtgttggatgaatatggcacccctaaggtggttaacgatggagttacaatt 372

                   
Query: 249 gcccgtgc 256
           || |||||
Sbjct: 373 gctcgtgc 380
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>emb|AL133293.28| Human DNA sequence from clone RP5-823N20 on chromosome 20 Contains the
             5' end of the SRC gene for v-src avian sarcoma
             (Schmidt-Ruppin A-2) viral oncogene homolog, the RPL7AL4
             gene for ribosomal protein L7A-like 4 (pseudogene) and a
             CpG island, complete sequence
          Length = 68662

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 2     cgcctccctcctccgctccttctcct 27
             ||||||||||||| ||||||||||||
Sbjct: 47037 cgcctccctcctcagctccttctcct 47012
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>emb|Z27222.1|BNPLCAS B.napus mRNA for plastid chaperonin-60 alpha subunit
          Length = 1975

 Score = 44.1 bits (22), Expect = 0.21
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                       
Query: 184 gagggaggaatgtagtgctggatgagcatggnaaccccaaagnggtgaacgatggtgtta 243
           ||||||||||||| ||| ||||||||  ||| | |||||| |  ||||||||||| || |
Sbjct: 286 gagggaggaatgttgtgttggatgagtttggtagccccaaggttgtgaacgatggagtca 345

               
Query: 244 ccat 247
           ||||
Sbjct: 346 ccat 349
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 65     gtcgcggctggtggtgcgcgcggac 89
              ||||||||| |||||||||||||||
Sbjct: 216524 gtcgcggctcgtggtgcgcgcggac 216548
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>gb|AC159972.5| Mus musculus chromosome 1, clone RP23-35D23, complete sequence
          Length = 199094

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 5      ctccctcctccgctccttctcctcc 29
              ||||||||||||||||| |||||||
Sbjct: 157437 ctccctcctccgctcctgctcctcc 157413
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>gb|BC055915.1| Mus musculus centrosome and spindle pole associated protein 1, mRNA
           (cDNA clone IMAGE:3993429), partial cds
          Length = 2081

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 5   ctccctcctccgctccttctcctcc 29
           ||||||||||||||||| |||||||
Sbjct: 133 ctccctcctccgctcctgctcctcc 109
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>ref|XM_985768.1| PREDICTED: Mus musculus centrosome and spindle pole associated
            protein 1 (Cspp1), mRNA
          Length = 4136

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 5    ctccctcctccgctccttctcctcc 29
            ||||||||||||||||| |||||||
Sbjct: 2211 ctccctcctccgctcctgctcctcc 2187
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>ref|XM_913097.2| PREDICTED: Mus musculus centrosome and spindle pole associated
            protein 1 (Cspp1), mRNA
          Length = 4136

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 5    ctccctcctccgctccttctcctcc 29
            ||||||||||||||||| |||||||
Sbjct: 2211 ctccctcctccgctcctgctcctcc 2187
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>ref|XM_129366.7| PREDICTED: Mus musculus centrosome and spindle pole associated
            protein 1 (Cspp1), mRNA
          Length = 4136

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 5    ctccctcctccgctccttctcctcc 29
            ||||||||||||||||| |||||||
Sbjct: 2211 ctccctcctccgctcctgctcctcc 2187
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>emb|X55394.3|MTMMOCLU Methylosinus trichosporium gene cluster for methane monooxygenase
            (MMO) with mmoR, mmoG, mmoX, mmoY, mmoB, mmoZ mmoD and
            mmoC genes
          Length = 10144

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 149  gctcgccaacgccgtcggngtcaccctcggcccgcg 184
            ||||||| |||||||||  ||||| |||||||||||
Sbjct: 2643 gctcgccgacgccgtcgccgtcacgctcggcccgcg 2678
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 161     cgtcggngtcaccctcggcccgcg 184
               |||||| |||||||||||||||||
Sbjct: 1658062 cgtcggcgtcaccctcggcccgcg 1658039
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>gb|AF451889.1| Actinomadura rubrobrunea strain IFO 14622 HSP70 gene, partial cds
          Length = 876

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 123 gccgcgctccaggccggcgtc 143
           |||||||||||||||||||||
Sbjct: 577 gccgcgctccaggccggcgtc 597
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>gb|AF451888.1| Actinocorallia herbida strain IFO 15485 HSP70 gene, partial cds
          Length = 1224

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 123 gccgcgctccaggccggcgtc 143
           |||||||||||||||||||||
Sbjct: 925 gccgcgctccaggccggcgtc 945
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 1       ccgcctccctcctccgctccttctcctcc 29
               ||||||||||||||||| ||| |||||||
Sbjct: 4879632 ccgcctccctcctccgcccctcctcctcc 4879604
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>ref|XM_342793.2| PREDICTED: Rattus norvegicus similar to hypothetical protein FLJ22490
            (predicted) (LOC362472), mRNA
          Length = 2394

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 5    ctccctcctccgctccttctcctcc 29
            ||||||||||||||||| |||||||
Sbjct: 1089 ctccctcctccgctcctgctcctcc 1065
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>emb|Z83115.1|CEK11D2 Caenorhabditis elegans Cosmid K11D2, complete sequence
          Length = 26806

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 1     ccgcctccctcctccgctccttctcctcc 29
             |||||||||| |||| |||||||||||||
Sbjct: 23600 ccgcctccctgctcctctccttctcctcc 23628
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>gb|AC135425.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0453H11,
              complete sequence
          Length = 187956

 Score = 42.1 bits (21), Expect = 0.84
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 1      ccgcctccctcctccgctccttctcctcc 29
              ||||||||||||||||| ||| |||||||
Sbjct: 152040 ccgcctccctcctccgcccctcctcctcc 152012
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>gb|AC162389.6| Mus musculus 6 BAC RP24-114M8 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 189477

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 29     ccaggggaggctgaggaggt 48
              ||||||||||||||||||||
Sbjct: 125356 ccaggggaggctgaggaggt 125337
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>gb|AC073422.8| Homo sapiens BAC clone RP11-535F1 from 7, complete sequence
          Length = 80743

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 9     ctcctccgctccttctcctc 28
             ||||||||||||||||||||
Sbjct: 53714 ctcctccgctccttctcctc 53733
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>emb|AJ621256.1| Enterococcus canis partial GroEL gene for heat shock protein 60,
           type strain LMG 12316T
          Length = 688

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 231 aacgatggtgttaccattgc 250
           ||||||||||||||||||||
Sbjct: 22  aacgatggtgttaccattgc 41
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>gb|AC091616.2| Rattus norvegicus strain Brown Norway clone RP31-153J8, complete
             sequence
          Length = 125026

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 7     ccctcctccgctccttctcctccc 30
             ||||||||| ||||||||||||||
Sbjct: 92814 ccctcctcccctccttctcctccc 92791
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 122     ggccgcgctccaggccggcg 141
               ||||||||||||||||||||
Sbjct: 4701250 ggccgcgctccaggccggcg 4701231
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>ref|XM_395705.2| PREDICTED: Apis mellifera similar to CG18497-PA, isoform A
            (LOC412243), partial mRNA
          Length = 12083

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 11   cctccgctccttctcctccc 30
            ||||||||||||||||||||
Sbjct: 3541 cctccgctccttctcctccc 3522
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 76      tggtgcgcgcggacgccaag 95
               ||||||||||||||||||||
Sbjct: 3817892 tggtgcgcgcggacgccaag 3817873
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     acggccgttcgtcgcggctg 74
              ||||||||||||||||||||
Sbjct: 364343 acggccgttcgtcgcggctg 364324
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>gb|AC145610.4| Mus musculus BAC clone RP24-281O20 from 18, complete sequence
          Length = 182640

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 5     ctccctcctccgctccttctcctc 28
             ||||||||||| ||||||||||||
Sbjct: 49965 ctccctcctcctctccttctcctc 49942
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>gb|AC149346.2| Phakopsora pachyrhizi clone JGIAFNA-33E14, complete sequence
          Length = 38941

 Score = 40.1 bits (20), Expect = 3.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 5     ctccctcctccgctccttct 24
             ||||||||||||||||||||
Sbjct: 21526 ctccctcctccgctccttct 21507


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,843,728
Number of Sequences: 3902068
Number of extensions: 2843728
Number of successful extensions: 51392
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 50999
Number of HSP's gapped (non-prelim): 391
length of query: 257
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 235
effective length of database: 17,147,199,772
effective search space: 4029591946420
effective search space used: 4029591946420
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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