ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7p19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1AROC_BARHE (Q6G4D4) Chorismate synthase (EC 4.2.3.5) (5-enolpyru... 32 0.78

>AROC_BARHE (Q6G4D4) Chorismate synthase (EC 4.2.3.5)|
           (5-enolpyruvylshikimate-3-phosphate phospholyase)
          Length = 366

 Score = 32.3 bits (72), Expect = 0.78
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = -3

Query: 510 LSCATNPSSPGITLVSQAVTSYLNRPRATLSSHCARRREL 391
           L C  +   PGIT     + SYLN+ +   S +  +RREL
Sbjct: 23  LGCVIDGCPPGITFTLSDIQSYLNKRKPGQSKYTTQRREL 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,734,133
Number of Sequences: 219361
Number of extensions: 918825
Number of successful extensions: 2381
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2380
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3812186532
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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