| Clone Name | baal7p18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CF150_HUMAN (Q8N884) Protein C6orf150 | 30 | 3.1 | 2 | GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-... | 29 | 9.0 | 3 | GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-... | 29 | 9.0 |
|---|
>CF150_HUMAN (Q8N884) Protein C6orf150| Length = 522 Score = 30.4 bits (67), Expect = 3.1 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = +2 Query: 242 RQASCKQQRAGCSNRVLEAKAKEDAPSPAPPSQAGLRVRLIDRDA 376 R SC+Q+ A CS + D PSP P A + VR RDA Sbjct: 117 RAGSCRQRGARCSTKPRPPPGPWDVPSPGLPVSAPILVR---RDA 158
>GLH1_CAEEL (P34689) ATP-dependent RNA helicase glh-1 (EC 3.6.1.-) (Germline| helicase 1) Length = 763 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +2 Query: 197 KGP*ARLLRFRGLGPRQASCKQQRAGCSNRVLEAKAKEDAPSPAPPSQ 340 +GP + +G G R A C + GC N + + P+PA P + Sbjct: 239 RGP-MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPNPAKPRE 285
>GLH2_CAEEL (Q966L9) ATP-dependent RNA helicase glh-2 (EC 3.6.1.-) (Germline| helicase 2) Length = 974 Score = 28.9 bits (63), Expect = 9.0 Identities = 14/48 (29%), Positives = 22/48 (45%) Frame = +2 Query: 197 KGP*ARLLRFRGLGPRQASCKQQRAGCSNRVLEAKAKEDAPSPAPPSQ 340 +GP + +G G R A C + GC N + + P+PA P + Sbjct: 450 RGP-MKCFNCKGEGHRSAECPEPPRGCFNCGEQGHRSNECPNPAKPRE 496 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,526,017 Number of Sequences: 219361 Number of extensions: 746403 Number of successful extensions: 2216 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 2142 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2214 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3985467738 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)