ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8e24 |
|---|---|
| Clone Library Name | barley_pub |
>SCRL1_ORYSA (Q84TX2) SCAR-like protein 1| Length = 2097 Score = 164 bits (414), Expect = 2e-40 Identities = 94/178 (52%), Positives = 109/178 (61%), Gaps = 2/178 (1%) Frame = +3 Query: 15 SDTTEHTASHSVLEEGNSQESKLQEKDADNLKGGPSEGQSHTAESMVSEDYPHGDHNLDT 194 SD T +AS + EE N + Q EG + ES DYPH DHN + Sbjct: 1869 SDATNLSASGLLTEEENIHNVEDQY-----------EGPLPSEESSGCLDYPHDDHNSEK 1917 Query: 195 ESILQPN--PLWPSNISKYLDDLGEGGYAHAEQPPVTGWTVGPQMLHPNYGISSEGSRFE 368 E I QP+ P N + + D EGGY HAEQPPV GWTV PQMLHPNYGIS E ++FE Sbjct: 1918 EDIHQPDGYAASPGN-NNHFDSSHEGGYLHAEQPPVMGWTVRPQMLHPNYGISMEENQFE 1976 Query: 369 PEVTDYRLTRKPVSVRNIPRNPLVDAVAAHDRSTMRKVSXLAPATXXPXTXDXNLXLE 542 P+V D+ L +KPVS+RNIPRNPLVDAVAAHDRSTMRKVS L T + NL LE Sbjct: 1977 PKVEDHLLIKKPVSIRNIPRNPLVDAVAAHDRSTMRKVSELVAPTDKSKPNERNLLLE 2034
>SCAR2_ARATH (Q5XPJ9) Protein SCAR2 (AtSCAR2) (Protein WAVE4) (Protein DISTORTED3)| (Protein IRREGULAR TRICHOME BRANCH1) Length = 1399 Score = 39.3 bits (90), Expect = 0.007 Identities = 20/41 (48%), Positives = 25/41 (60%) Frame = +3 Query: 369 PEVTDYRLTRKPVSVRNIPRNPLVDAVAAHDRSTMRKVSXL 491 P + Y+ P PR+PLVDAVAAHDR M+KVS + Sbjct: 1284 PTLDTYKTEVVPTVRLPRPRSPLVDAVAAHDRRKMKKVSEM 1324
>WNK2_HUMAN (Q9Y3S1) Serine/threonine-protein kinase WNK2 (EC 2.7.11.1) (Protein| kinase with no lysine 2) (Protein kinase, lysine-deficient 2) Length = 2297 Score = 37.7 bits (86), Expect = 0.021 Identities = 37/123 (30%), Positives = 54/123 (43%), Gaps = 2/123 (1%) Frame = +3 Query: 45 SVLEEGNSQESKLQEKDADNLKGGPSEGQSHTAESMVSEDYPHGDHNLDTESILQPNPLW 224 +V+E+G S S E ++ G +G+ ++S V P D + ++P + Sbjct: 1671 AVMEQGTSS-SMTAESSPRSMLGYDRDGRQVASDSHVVPSVPQ-----DVPAFVRPARVE 1724 Query: 225 PSNISKYLDDLGEGGYAHAEQPPVTGWTVGPQMLHP-NYGISSEGS-RFEPEVTDYRLTR 398 P++ D GE G + AE PP TVG Q HP G + GS R PE D Sbjct: 1725 PTD-----RDGGEAGESSAEPPPSDMGTVGGQASHPQTLGARALGSPRKRPEQQDVSSPA 1779 Query: 399 KPV 407 K V Sbjct: 1780 KTV 1782
>DMP1_HUMAN (Q13316) Dentin matrix acidic phosphoprotein 1 precursor (Dentin| matrix protein 1) (DMP-1) Length = 513 Score = 33.5 bits (75), Expect = 0.40 Identities = 20/62 (32%), Positives = 31/62 (50%) Frame = +3 Query: 15 SDTTEHTASHSVLEEGNSQESKLQEKDADNLKGGPSEGQSHTAESMVSEDYPHGDHNLDT 194 S + E SHS E S+ES +E D+D+ S+ S++ ES S + N++ Sbjct: 427 SSSQEGLQSHSSSAESQSEESHSEEDDSDSQDSSRSKEDSNSTESKSSSEEDGQLKNIEI 486 Query: 195 ES 200 ES Sbjct: 487 ES 488
>MUTS2_BACSU (P94545) MutS2 protein| Length = 785 Score = 32.3 bits (72), Expect = 0.89 Identities = 21/65 (32%), Positives = 30/65 (46%) Frame = +3 Query: 78 KLQEKDADNLKGGPSEGQSHTAESMVSEDYPHGDHNLDTESILQPNPLWPSNISKYLDDL 257 K++EKD + +K P + ++ +DY H LD N L S + KYLDD Sbjct: 675 KVKEKDLEFIKSAPEPKKEKMITAVKGKDY-HVSLELDLRGERYENAL--SRVEKYLDDA 731 Query: 258 GEGGY 272 GY Sbjct: 732 VLAGY 736
>PFA4_USTMA (Q4PE27) Palmitoyltransferase PFA4 (EC 2.3.1.-) (Protein fatty| acyltransferase 4) Length = 604 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 5/51 (9%) Frame = -3 Query: 242 FTYIARP---QRVWL--KYTLCVQVMITMRIIFRYH*FCSM*LAFRRTTLE 105 +TY P + VWL Y LC+ V++ + I YH +C LA +TT+E Sbjct: 255 YTYWREPCARELVWLVVNYALCIPVILLVGIFSLYHFYC---LAVNQTTIE 302
>SM3L3_ARATH (Q9FIY7) Putative SWI/SNF-related matrix-associated actin-dependent| regulator of chromatin subfamily A member 3-like 3 (EC 3.6.1.-) (SMARCA3-like protein 3) Length = 1277 Score = 31.2 bits (69), Expect = 2.0 Identities = 36/132 (27%), Positives = 54/132 (40%), Gaps = 7/132 (5%) Frame = +3 Query: 48 VLEEGNSQESKLQEKDADNL-KGGPSEGQSHTAESMVSEDY-PHGDHNLDTESILQPNPL 221 VLE+ S+ +K E++ D+L G S+G S M E Y P G + IL P PL Sbjct: 260 VLEDQPSEINKKLEQENDDLFSSGDSDGTSAKRRKMEMESYAPVGVES----CILAPTPL 315 Query: 222 ---WPSNIS--KYLDDLGEGGYAHAEQPPVTGWTVGPQMLHPNYGISSEGSRFEPEVTDY 386 P + + +D E Y H + PV V + E +F E Sbjct: 316 RVVKPEKLDTPEVIDLESEKSYTHVKMEPVEEIKVEAVKMSSQV----EDVKFSREQKSV 371 Query: 387 RLTRKPVSVRNI 422 + ++PV R + Sbjct: 372 YVKKEPVGARKV 383
>UME6_YEAST (P39001) Transcriptional regulator UME6 (Negative transcriptional| regulator of IME2) Length = 836 Score = 31.2 bits (69), Expect = 2.0 Identities = 27/108 (25%), Positives = 43/108 (39%) Frame = +3 Query: 12 PSDTTEHTASHSVLEEGNSQESKLQEKDADNLKGGPSEGQSHTAESMVSEDYPHGDHNLD 191 P++T HT S S L+ + ++K P E + T + +D D+ + Sbjct: 96 PNNTPVHTPSGS---------PSLKVQSGGDIKDDPKENDTTTTTNTTLQDRRDSDNAVH 146 Query: 192 TESILQPNPLWPSNISKYLDDLGEGGYAHAEQPPVTGWTVGPQMLHPN 335 + +PL PSN L G A A P ++G + PQ N Sbjct: 147 AAA----SPLAPSNTPSDPKSLCNGHVAQATDPQISG-AIQPQYTATN 189
>ARR2_ARATH (Q9ZWJ9) Two-component response regulator ARR2 (Receiver-like| protein 5) Length = 664 Score = 31.2 bits (69), Expect = 2.0 Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%) Frame = +3 Query: 18 DTTEHTASHSVLEEGNSQESKLQEK-DADNLKGGPSEGQSHTAESMVSEDY-PHGDHNLD 191 + +EH+ S+ + G ++ + Q + DADN +EG ++ E+ GD D Sbjct: 152 NVSEHSGG-SIEDTGGDRDRQQQHREDADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKED 210 Query: 192 TESILQPNPLW 224 + S+ +P +W Sbjct: 211 SSSLKKPRVVW 221
>MAML1_HUMAN (Q92585) Mastermind-like protein 1 (Mam-1)| Length = 1016 Score = 30.4 bits (67), Expect = 3.4 Identities = 21/72 (29%), Positives = 39/72 (54%), Gaps = 3/72 (4%) Frame = +3 Query: 12 PSDTTEHTASH--SVLEEGNSQESKLQEKDADNLKGGPSEGQSHTA-ESMVSEDYPHGDH 182 PS+ +++A++ SVL+ GN++ L AD +G P GQS A + + + H H Sbjct: 495 PSNLNQNSANNQGSVLDYGNTKP--LSHYKADCGQGSPGSGQSKPALMAYLPQQLSHISH 552 Query: 183 NLDTESILQPNP 218 ++ +++P P Sbjct: 553 EQNSLFLMKPKP 564
>RHSC_ECOLI (P16918) Protein rhsC precursor| Length = 1397 Score = 29.6 bits (65), Expect = 5.8 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 Query: 326 KHLRSNSPSRHWWLLGMC 273 ++L +NSP WWLLG C Sbjct: 172 RYLATNSPQGPWWLLGWC 189
>RHSB_ECOLI (P16917) Protein rhsB precursor| Length = 1411 Score = 29.6 bits (65), Expect = 5.8 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 Query: 326 KHLRSNSPSRHWWLLGMC 273 ++L +NSP WWLLG C Sbjct: 172 RYLATNSPQGPWWLLGWC 189
>NAB1_HUMAN (Q13506) NGFI-A-binding protein 1 (EGR-1-binding protein 1)| (Transcriptional regulatory protein p54) Length = 487 Score = 29.6 bits (65), Expect = 5.8 Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%) Frame = +3 Query: 117 PSEGQSHTAESM-VSEDYPHGDHNLDTESI 203 PSE +SH++ES+ + +DYPH L+ + I Sbjct: 450 PSEAKSHSSESLGILKDYPHSAFTLEKKVI 479
>RHSA_ECOLI (P16916) Protein rhsA precursor| Length = 1377 Score = 29.6 bits (65), Expect = 5.8 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = -3 Query: 326 KHLRSNSPSRHWWLLGMC 273 ++L +NSP WWLLG C Sbjct: 172 RYLATNSPQGPWWLLGWC 189
>PORB_METTH (O27771) Pyruvate synthase subunit porB (EC 1.2.7.1) (Pyruvate| oxidoreductase beta chain) (POR) (Pyruvic-ferredoxin oxidoreductase beta subunit) Length = 288 Score = 29.3 bits (64), Expect = 7.6 Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 3/121 (2%) Frame = +3 Query: 111 GGPSEGQSHTAESMVSEDYPHGDHNLDTESILQPNPLWPSNISKYLDDLGEGGYAHAEQP 290 G S G+ ++M HG + T SI P + K + G Y H QP Sbjct: 150 GKESFGEDRPKKNMPLIMAAHGVPYVATASISYPEDFM-EKVRKAKETDGPA-YIHLHQP 207 Query: 291 PVTGWTVGPQMLHPNYGISSE-GS--RFEPEVTDYRLTRKPVSVRNIPRNPLVDAVAAHD 461 TGW P ++ E GS +E E D+R+T +PV R P+ + + A Sbjct: 208 CTTGWGFDPAKTVELGRLAVETGSWILYEIEDGDFRVTYRPVQ-----RKPVEEYLNAQK 262 Query: 462 R 464 R Sbjct: 263 R 263
>BCCA_MYCLE (P46392) Acetyl-/propionyl-coenzyme A carboxylase alpha chain| [Includes: Biotin carboxylase (EC 6.3.4.14); Biotin carboxyl carrier protein (BCCP)] Length = 598 Score = 28.9 bits (63), Expect = 9.9 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 3/74 (4%) Frame = +3 Query: 312 GPQMLHPNYGISSEGSRFEPEVTDYRLT---RKPVSVRNIPRNPLVDAVAAHDRSTMRKV 482 G +HP YG +E + F V D L P S+R++ D+ T R + Sbjct: 81 GANAIHPGYGFLAENADFAQAVIDAGLIWIGPSPQSIRDL-----------GDKVTARHI 129 Query: 483 SXLAPATXXPXTXD 524 + A A P T D Sbjct: 130 AARAQAPLVPGTPD 143
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 28.9 bits (63), Expect = 9.9 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 1/22 (4%) Frame = -1 Query: 136 CDWPSDGPPL-RLSASFSCNLL 74 CDWP+DGP + R A +C LL Sbjct: 1035 CDWPADGPAVSRQHAYLACELL 1056
>YM56_YEAST (Q03691) Hypothetical 28.9 kDa protein in CLN1-RAD14 intergenic| region Length = 256 Score = 28.9 bits (63), Expect = 9.9 Identities = 34/153 (22%), Positives = 54/153 (35%), Gaps = 4/153 (2%) Frame = +3 Query: 39 SHSVLEEGNSQESKLQEKDADNLKGGPSEGQSHTAESMVSEDYPHGDHNLDTESILQPNP 218 S+S E+G +E+ Q + G P M S Y HG +N+ L NP Sbjct: 65 SYSFTEDGWYEEATYQ------VSGNPRNPTC----PMASLIYQHGTYNISENGTLVLNP 114 Query: 219 LWPSNISKYLDDLGEGGYA----HAEQPPVTGWTVGPQMLHPNYGISSEGSRFEPEVTDY 386 + + D + G + + + + VG H Y + P Y Sbjct: 115 IEVDGRQLFSDPCNDDGVSTYSRYNQTETFKEYAVGIDPYHGIYTLQLYQYDGTPMQPLY 174 Query: 387 RLTRKPVSVRNIPRNPLVDAVAAHDRSTMRKVS 485 R P+ + NP A + D S+ +K S Sbjct: 175 LAYRPPMMLPTETLNPTSSATSTDDPSSNKKRS 207
>HASP_HUMAN (Q8TF76) Serine/threonine-protein kinase Haspin (EC 2.7.11.1)| (Haploid germ cell-specific nuclear protein kinase) (H-Haspin) (Germ cell-specific gene 2 protein) Length = 798 Score = 28.9 bits (63), Expect = 9.9 Identities = 18/42 (42%), Positives = 23/42 (54%) Frame = -1 Query: 148 DSAVCDWPSDGPPLRLSASFSCNLLSWLLPSSNTECDAVCSV 23 D +VC P DG L +SAS +L S P S T D+V S+ Sbjct: 149 DLSVCGQPRDGDELGISASLFSSLAS-PCPGSPTPRDSVISI 189 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 76,768,804 Number of Sequences: 219361 Number of extensions: 1632539 Number of successful extensions: 4453 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 4317 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4448 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4373119116 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
