ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7p16 |
|---|---|
| Clone Library Name | barley_pub |
>YAI5_SCHPO (Q09893) Hypothetical protein C24B11.05 in chromosome I| Length = 226 Score = 75.9 bits (185), Expect = 7e-14 Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 3/120 (2%) Frame = +3 Query: 183 YPLSSGISSHVKTNIEAYMVEKLGIEESKIENLGNLLYKNYGTTMAGLRAIGYNFDYDEY 362 YP S I + + I A+ +KLGI + E L + Y++YG + GL + + D +Y Sbjct: 17 YPKSYKIHNMMAARITAFFSDKLGIPTEEAERLREVYYRHYGIAIRGL-VLHHEIDAVDY 75 Query: 363 HSFVHGRLPYDN-IKPDPVLKHILKNMR--IRKLIFTNGDMIHAVRALKRLGLEDCFEGI 533 V LP + IK D VL+ +L +R + IFTN ++HA R LK LG+EDCF+GI Sbjct: 76 DQRVDQSLPLEKVIKKDEVLREMLLELRKKYKCWIFTNAYIVHANRVLKYLGIEDCFDGI 135
>YEM7_YEAST (P40025) Hypothetical 37.7 kDa protein in PIP1-GLN3 intergenic| region Length = 321 Score = 63.5 bits (153), Expect = 3e-10 Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 8/150 (5%) Frame = +3 Query: 108 EFDERCLKVQDPKXXXXXXXXXXXXYPLSSGISSHVKTNIEAYMVEKLGIEESKIENLGN 287 E D L DP Y S+ + ++ ++ + +LG ++ + E L Sbjct: 39 EVDPPKLPDPDPARKVFFFDIDNTLYRKSTKVQLLMQQSLSNFFKYELGFDDDEAERLIE 98 Query: 288 LLYKNYGTTMAGLRAIGYNFDYDEYHSFVHGRLPY-DNIKPDPVLKHILKNMRIRKL--- 455 Y+ YG ++ GL D +Y++F+ LP D +KPD L+ +L N++ +KL Sbjct: 99 SYYQEYGLSVKGLIKNKQIDDVLQYNTFIDDSLPLQDYLKPDWKLRELLINLKKKKLGKF 158 Query: 456 ----IFTNGDMIHAVRALKRLGLEDCFEGI 533 +FTN HA+R +K LG+ D F+GI Sbjct: 159 DKLWLFTNSYKNHAIRCVKILGIADLFDGI 188
>SSM1_YEAST (P53078) Protein SSM1| Length = 280 Score = 53.5 bits (127), Expect = 4e-07 Identities = 40/123 (32%), Positives = 62/123 (50%), Gaps = 6/123 (4%) Frame = +3 Query: 183 YPLSSGISSHVKTNIEAYMVEKLGIEESKIENLGNLLYKNYGTTMAGLRAIGYNFDYDEY 362 Y S+ I ++ +I + L + L N YK YG + GL + + + EY Sbjct: 67 YKSSTRIHDLMQQSILRFFQTHLKLSPEDAHVLNNSYYKEYGLAIRGL-VMFHKVNALEY 125 Query: 363 HSFVHGRLPYDNI-KPDPVLKHILKNMR----IRKL-IFTNGDMIHAVRALKRLGLEDCF 524 + V LP +I KPD L+++L +R I KL +FTN HA+R L+ LG+ D F Sbjct: 126 NRLVDDSLPLQDILKPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLF 185 Query: 525 EGI 533 +G+ Sbjct: 186 DGL 188
>5E5_RAT (Q63003) 5E5 antigen| Length = 825 Score = 33.5 bits (75), Expect = 0.38 Identities = 19/39 (48%), Positives = 19/39 (48%), Gaps = 3/39 (7%) Frame = -3 Query: 213 RVMRSRSSAGTECRRGRRAGSRTWGPGP*G---SARRTP 106 RV R GTE RG AG R WGP P G RR P Sbjct: 401 RVESPREWGGTESPRGWEAGPREWGPSPGGRGDGPRRRP 439
>YOD3_CAEEL (P34595) Hypothetical protein ZC262.3 in chromosome III| Length = 773 Score = 32.7 bits (73), Expect = 0.66 Identities = 22/61 (36%), Positives = 32/61 (52%) Frame = +3 Query: 336 GYNFDYDEYHSFVHGRLPYDNIKPDPVLKHILKNMRIRKLIFTNGDMIHAVRALKRLGLE 515 G N E H++ H +L +D P P L+HI+ +R L NG +IH LK L +E Sbjct: 73 GSNIQRLELHNWQHDQLNFDIFAPFPQLEHII--LRDGDLESLNGTVIHP--TLKVLSIE 128 Query: 516 D 518 + Sbjct: 129 N 129
>ATP8_MYXGL (O63913) ATP synthase protein 8 (EC 3.6.3.14) (ATPase subunit 8)| (A6L) Length = 54 Score = 32.0 bits (71), Expect = 1.1 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = -2 Query: 508 PSLLRALTAWIMSPLVKMSLRMRMFLRICLRTXXXXXXXXXXLPWTKLW 362 P LL AL+ W+ PL+ +SL FL + L+T PW W Sbjct: 8 PWLLMALSLWVCFPLMMLSL--SSFLPLTLKTSLPSTLKSSPNPWILPW 54
>KR109_HUMAN (P60411) Keratin-associated protein 10-9 (Keratin-associated| protein 10.9) (High sulfur keratin-associated protein 10.9) (Keratin-associated protein 18-9) (Keratin-associated protein 18.9) Length = 292 Score = 31.2 bits (69), Expect = 1.9 Identities = 14/31 (45%), Positives = 15/31 (48%) Frame = -3 Query: 315 SWCHSSYTAGCQGFRSCSPQYPASQPCRLQC 223 S C SS T C SC P Y S PC+ C Sbjct: 69 SGCTSSCTPSCCQQSSCQPAYCTSSPCQQAC 99
>LEPA_FRATT (Q5NEF8) GTP-binding protein lepA| Length = 594 Score = 30.8 bits (68), Expect = 2.5 Identities = 25/96 (26%), Positives = 42/96 (43%) Frame = +3 Query: 231 AYMVEKLGIEESKIENLGNLLYKNYGTTMAGLRAIGYNFDYDEYHSFVHGRLPYDNIKPD 410 AY V++LG+ K+++L +L G +AG++ I + H P D KP Sbjct: 231 AYQVDRLGVFTPKMKDLDHLKAGEVGFIVAGIKDI---HGAPVGDTLTHAHNPTD--KPV 285 Query: 411 PVLKHILKNMRIRKLIFTNGDMIHAVRALKRLGLED 518 P K + + ++ D AL++L L D Sbjct: 286 PGFKKVQPQVYAGMFTISSDDYPDFREALEKLSLND 321
>AFLR_ASPFL (P41765) Aflatoxin biosynthesis regulatory protein| Length = 437 Score = 30.4 bits (67), Expect = 3.3 Identities = 13/28 (46%), Positives = 13/28 (46%) Frame = +2 Query: 392 RQHQARPRSQAYSQEHAHPQAHFHQR*H 475 R Q P YS HAH QAH H H Sbjct: 88 RSEQGLPAHNTYSTPHAHTQAHTHAHSH 115
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 30.0 bits (66), Expect = 4.3 Identities = 21/56 (37%), Positives = 25/56 (44%), Gaps = 3/56 (5%) Frame = +2 Query: 14 APHTSAFASASSVALPQRRTVSSSFHQSPDHGVRRALP---QGPGPQVRLPALRPR 172 A SA +S+SS + + SSS D GVR P GP P PA PR Sbjct: 373 AARRSASSSSSSSSSSSSSSSSSSSEGEEDEGVRPGAPLARAGPPPSPPAPAAAPR 428
>HFW1_DROME (Q9W568) Protein halfway precursor (Protein singed wings)| Length = 611 Score = 30.0 bits (66), Expect = 4.3 Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 4/73 (5%) Frame = +2 Query: 329 GNWLQLRLRRVPQLCPW-KAALRQHQARPRSQAYSQEHAHPQA--HFHQR*HDPCRESPQ 499 G WL L L V C + A A ++ HAHPQA H H H P +E Q Sbjct: 7 GTWLLLLLLLVAGACARPEIAHTPDPAALGEESTPHAHAHPQARHHHHAHPHAPLKEDEQ 66 Query: 500 -EAGPGGLLRGDH 535 A P +L D+ Sbjct: 67 GTAIPAPILTTDN 79
>YIM2_YEAST (P40473) Hypothetical 39.5 kDa protein in SIM1-RPI1 intergenic| region Length = 351 Score = 30.0 bits (66), Expect = 4.3 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 5/67 (7%) Frame = +2 Query: 41 ASSVALPQRRTVSSSFHQSPDHGVRRALPQ-----GPGPQVRLPALRPRRHSVPAELRDL 205 A ++ +P + +S+ + Q P V++ +PQ G GPQ +LP + S + Sbjct: 200 AYTLPMPANQWMSNPYMQPPQPQVQQIMPQYLYPPGMGPQAQLPTMSSNSESQTPVMSSQ 259 Query: 206 ITRQDQH 226 +QH Sbjct: 260 FLSLNQH 266
>ACEK_BURPS (Q63Y16) Isocitrate dehydrogenase kinase/phosphatase (EC 2.7.11.5)| (EC 3.1.3.-) (IDH kinase/phosphatase) (IDHK/P) Length = 603 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +3 Query: 282 GNLLYKNYGTTMAGLRAIGYNFDYDEY 362 G++LYKN+G T G R + Y++D EY Sbjct: 468 GDMLYKNFGVTRHG-RVVFYDYDEIEY 493
>ACEK_BURMA (Q62MX7) Isocitrate dehydrogenase kinase/phosphatase (EC 2.7.11.5)| (EC 3.1.3.-) (IDH kinase/phosphatase) (IDHK/P) Length = 603 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +3 Query: 282 GNLLYKNYGTTMAGLRAIGYNFDYDEY 362 G++LYKN+G T G R + Y++D EY Sbjct: 468 GDMLYKNFGVTRHG-RVVFYDYDEIEY 493
>HEM3_YERPE (P46355) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%) Frame = +3 Query: 402 KPDPVLKHILKNMRIRKLIFTNGD---MIHAVRALKRLGLED 518 +PD +++ + N+ R NGD +I AV LKRLGLE+ Sbjct: 140 RPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLGLEN 181
>CUT_DROME (P10180) Homeobox protein cut| Length = 2175 Score = 29.6 bits (65), Expect = 5.6 Identities = 14/50 (28%), Positives = 19/50 (38%) Frame = +2 Query: 386 ALRQHQARPRSQAYSQEHAHPQAHFHQR*HDPCRESPQEAGPGGLLRGDH 535 A Q Q + Q Q+ H Q H HQ+ H ++ P DH Sbjct: 664 AHHQQQQHHQQQHQHQQQHHQQQHLHQQHHHHLQQQPNSGSNSNPASNDH 713
>MTA1_SORMA (O42837) Mating type protein SmtA-1| Length = 306 Score = 29.6 bits (65), Expect = 5.6 Identities = 17/47 (36%), Positives = 26/47 (55%) Frame = +2 Query: 86 FHQSPDHGVRRALPQGPGPQVRLPALRPRRHSVPAELRDLITRQDQH 226 F++ P + R A+ Q ++ + AL PR H+V AE D+ T Q H Sbjct: 208 FNKRPHYQQRHAV-QADSSELGVSALFPRNHAVAAEADDVATLQLPH 253
>ACEK_RALEU (Q8KLU8) Isocitrate dehydrogenase kinase/phosphatase (EC 2.7.11.5)| (EC 3.1.3.-) (IDH kinase/phosphatase) (IDHK/P) Length = 613 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +3 Query: 282 GNLLYKNYGTTMAGLRAIGYNFDYDEY 362 G++LYKN+G T G R + Y++D EY Sbjct: 474 GDMLYKNFGVTRHG-RVVFYDYDEIEY 499
>ACEK_RALSO (Q8Y2Q7) Isocitrate dehydrogenase kinase/phosphatase (EC 2.7.11.5)| (EC 3.1.3.-) (IDH kinase/phosphatase) (IDHK/P) Length = 608 Score = 29.6 bits (65), Expect = 5.6 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +3 Query: 282 GNLLYKNYGTTMAGLRAIGYNFDYDEY 362 G++LYKN+G T G R + Y++D EY Sbjct: 474 GDMLYKNFGVTRHG-RVVFYDYDEIEY 499
>ABDA_TRICA (Q07961) Homeobox protein abdominal-A homolog| Length = 343 Score = 29.3 bits (64), Expect = 7.3 Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 3/79 (3%) Frame = +2 Query: 299 ELWHHDGRPQGNWLQLRLRRVPQLCPWKAALRQHQARPRSQAYS-QEHAHPQAH--FHQR 469 ++W + R + L+ LR V ++ R+ Q R + Q Q+ Q H HQ Sbjct: 261 KIWFQNRRMK---LKKELRAVKEINEQARREREEQERHKQQQQEKQQKIEQQTHSSIHQH 317 Query: 470 *HDPCRESPQEAGPGGLLR 526 HDP + S ++G LL+ Sbjct: 318 HHDPMKMSLDKSGGSDLLK 336
>CLC4E_RAT (Q67EQ1) C-type lectin domain family 4 member E (C-type lectin| superfamily member 9) (Macrophage-inducible C-type lectin) Length = 215 Score = 29.3 bits (64), Expect = 7.3 Identities = 13/35 (37%), Positives = 18/35 (51%) Frame = +1 Query: 193 APGSHHTSRPTLKPTWLRSWVLRRARSKTLATCCI 297 +P SHHT R K + + SW + A L+ C I Sbjct: 6 SPASHHTERECFKNSQVLSWTMAGASILFLSVCFI 40
>HEM3_YERPS (Q66G00) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 29.3 bits (64), Expect = 7.3 Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 3/41 (7%) Frame = +3 Query: 402 KPDPVLKHILKNMRIRKLIFTNGD---MIHAVRALKRLGLE 515 +PD +++ + N+ R NGD +I AV LKRLGLE Sbjct: 140 RPDLIIRDLRGNVGTRLAKLDNGDYQAIILAVAGLKRLGLE 180
>UREE_RALEJ (Q473Q8) Urease accessory protein ureE| Length = 221 Score = 29.3 bits (64), Expect = 7.3 Identities = 12/50 (24%), Positives = 19/50 (38%) Frame = +2 Query: 380 KAALRQHQARPRSQAYSQEHAHPQAHFHQR*HDPCRESPQEAGPGGLLRG 529 +A +H +S H+H +H H HD + E G + G Sbjct: 165 QAVFHEHHGHDHDHGHSHSHSHSHSHSHSHSHDHDHDHDHEHDVKGHVHG 214
>KPRS_NEIMB (P65235) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 327 Score = 29.3 bits (64), Expect = 7.3 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +3 Query: 279 LGNLLYKNYGTTMAGL-RAIGYNFDYDEYHSFVHGRLPYDNIKPDPVLKHILKNMRIRKL 455 + N+LY AG+ R + + D+ F +P DNI P+L + +K RI L Sbjct: 116 VANMLYS------AGIDRVLTVDLHADQIQGFFD--IPVDNIYATPILLNDIKQQRIENL 167 Query: 456 IFTNGDMIHAVRA 494 + D+ VRA Sbjct: 168 TVVSPDIGGVVRA 180
>KPRS_NEIMA (P65234) Ribose-phosphate pyrophosphokinase (EC 2.7.6.1) (RPPK)| (Phosphoribosyl pyrophosphate synthetase) (P-Rib-PP synthetase) (PRPP synthetase) Length = 327 Score = 29.3 bits (64), Expect = 7.3 Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 1/73 (1%) Frame = +3 Query: 279 LGNLLYKNYGTTMAGL-RAIGYNFDYDEYHSFVHGRLPYDNIKPDPVLKHILKNMRIRKL 455 + N+LY AG+ R + + D+ F +P DNI P+L + +K RI L Sbjct: 116 VANMLYS------AGIDRVLTVDLHADQIQGFFD--IPVDNIYATPILLNDIKQQRIENL 167 Query: 456 IFTNGDMIHAVRA 494 + D+ VRA Sbjct: 168 TVVSPDIGGVVRA 180
>PACC_DEBHA (Q6BSZ4) pH-response transcription factor pacC/RIM101| Length = 617 Score = 29.3 bits (64), Expect = 7.3 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 1/41 (2%) Frame = +2 Query: 380 KAALRQHQARPRSQAYSQEHAHPQAHFHQ-R*HDPCRESPQ 499 KA RQ + + Y EH H Q + Q H+P PQ Sbjct: 261 KAHRRQQEEHDHEREYEHEHEHEQEQYRQLHFHNPSHSQPQ 301
>MY18A_MOUSE (Q9JMH9) Myosin-18A (Myosin XVIIIa) (Myosin containing PDZ domain)| (Molecule associated with JAK3 N-terminus) (MAJN) Length = 2035 Score = 28.9 bits (63), Expect = 9.5 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%) Frame = +2 Query: 14 APHTSAFASASSVALPQR--RTVSSSFHQSPDHGVRRALPQGPGPQVRLPALRPRRHSVP 187 A TS + S+ PQ RT+ Q P G+ R PGP+ R+P L +R P Sbjct: 150 ASETSTPSEHSAAPSPQVEVRTLEGQLMQHPGLGIPR-----PGPRSRVPELVTKR--FP 202 Query: 188 AELR 199 A+LR Sbjct: 203 ADLR 206
>CEZ2_MOUSE (Q8R554) Zinc finger A20 domain-containing protein ? (EC 3.-.-.-)| (Zinc finger protein Cezanne 2) (OTU domain-containing protein 7) Length = 926 Score = 28.9 bits (63), Expect = 9.5 Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 1/60 (1%) Frame = -3 Query: 288 GCQGFRSCSPQYPASQPCRLQCWS*RVMRSRSSAGTECR-RGRRAGSRTWGPGP*GSARR 112 G G SP A+QP +L ++ R S GT R RA PGP G ARR Sbjct: 703 GAPGPERASPGPTAAQPTQLVL----KLKERPSPGTGASARAARAAGGAASPGPGGGARR 758
>KR10A_HUMAN (P60014) Keratin-associated protein 10-10 (Keratin-associated| protein 10.10) (High sulfur keratin-associated protein 10.10) (Keratin-associated protein 18-10) (Keratin-associated protein 18.10) Length = 251 Score = 28.9 bits (63), Expect = 9.5 Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 4/36 (11%) Frame = -3 Query: 318 PSWCHSSYTAGCQG----FRSCSPQYPASQPCRLQC 223 PS C S YT+ C SC P S PC+ C Sbjct: 59 PSACQSGYTSSCTTPCYQQSSCQPDCCTSSPCQQAC 94
>HEM3_ERWCT (Q6CZG3) Porphobilinogen deaminase (EC 2.5.1.61) (PBG)| (Hydroxymethylbilane synthase) (HMBS) (Pre-uroporphyrinogen synthase) Length = 313 Score = 28.9 bits (63), Expect = 9.5 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 3/42 (7%) Frame = +3 Query: 402 KPDPVLKHILKNMRIRKLIFTNGD---MIHAVRALKRLGLED 518 +PD V++ + N+ R NG+ +I AV LKRLGLE+ Sbjct: 140 RPDLVIRDLRGNVGTRLAKLDNGEYDAIILAVAGLKRLGLEE 181
>AEP3_YEAST (Q12089) ATPase expression protein 3| Length = 606 Score = 28.9 bits (63), Expect = 9.5 Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 13/118 (11%) Frame = +3 Query: 198 GISSHVKTNIEAYMVEKLGIEESKIENLGNLLYKNYGTTMAGLRAIGYN---FDYDEYHS 368 GI SH K N + KL K+ L +LL+ TT+ A YN + + E+ Sbjct: 181 GILSHTKFNFRSS--SKLNGIVRKM--LRHLLHPTNKTTLPLRSAQVYNDSIYFFSEHFD 236 Query: 369 F-----VHGRLPYDNIKPDPV-----LKHILKNMRIRKLIFTNGDMIHAVRALKRLGL 512 F + ++ + KP+ + L++++KN IRK + +++ +R+++ G+ Sbjct: 237 FASCREIFAQMKAEGTKPNTITFNLLLRNVVKNSHIRKTKHPDDEVLFYLRSMRNHGV 294 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,888,269 Number of Sequences: 219361 Number of extensions: 1469349 Number of successful extensions: 5559 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5188 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5510 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4200495993 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
