ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7p16
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|AY106832.1| Zea mays PCO074808 mRNA sequence 525 e-146
2dbj|AK100173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 498 e-137
3dbj|AK059223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 498 e-137
4dbj|AK067356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 468 e-129
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 137 4e-29
6gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare str... 137 4e-29
7gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome... 137 4e-29
8dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 137 4e-29
9emb|AJ237988.1|VVI237988 Vitis vinifera mRNA for putative ripeni... 58 3e-05
10ref|XM_469419.1| Oryza sativa (japonica cultivar-group), mRNA 52 0.002
11dbj|AK099563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
12dbj|AK061982.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
13dbj|AK061528.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
14gb|AY108507.1| Zea mays PCO092437 mRNA sequence 44 0.46
15gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, comp... 42 1.8
16emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on ch... 42 1.8
17emb|AL033520.16|HS349A12 Human DNA sequence from clone RP3-349A1... 42 1.8
18dbj|AK001094.1| Homo sapiens cDNA FLJ10232 fis, clone HEMBB1000244 42 1.8
19gb|AC132812.9| Homo sapiens chromosome 17, clone RP13-104F24, co... 42 1.8
20dbj|AP002992.4| Homo sapiens genomic DNA, chromosome 11 clone:CT... 42 1.8
21dbj|AP002813.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 42 1.8
22gb|AC009994.10| Homo sapiens chromosome 17, clone RP11-87N3, com... 42 1.8
23gb|AC150242.3| Rhinolophus ferrumequinum clone VMRC7-331J24, com... 40 7.3
24gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosom... 40 7.3
25gb|AY657496.1| Synthetic construct Peudomonas aeruginosa clone F... 40 7.3
26ref|XM_959852.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
27ref|XM_324968.1| Neurospora crassa OR74A hypothetical protein (N... 40 7.3
28gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome... 40 7.3
29ref|XM_785414.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 7.3
30emb|BX842680.1| Neurospora crassa DNA linkage group I cosmid con... 40 7.3
31emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.3
32gb|AC155227.3| Rhinolophus ferrumequinum clone VMRC7-4K1, comple... 40 7.3
33gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, co... 40 7.3
34emb|BX323041.9| Zebrafish DNA sequence from clone RP71-82P7 in l... 40 7.3
35gb|AF035381.1|AF035381 Lytechinus variegatus ovoperoxidase (LvOp... 40 7.3
36gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold 40 7.3
37gb|AE004544.1| Pseudomonas aeruginosa PAO1, section 105 of 529 o... 40 7.3

>gb|AY106832.1| Zea mays PCO074808 mRNA sequence
          Length = 1378

 Score =  525 bits (265), Expect = e-146
 Identities = 391/433 (90%)
 Strand = Plus / Plus

                                                                       
Query: 104 catggagttcgacgagcgctgcctcaaggtccaggaccccaagttcgactgcctgctctt 163
           |||||||||||| || ||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 165 catggagttcgaagaccgctgccacaaggtccaggagcccaagttcgactgcctgctctt 224

                                                                       
Query: 164 cgacctcgacgacactctgtacccgctgagctccgggatctcatcacacgtcaagaccaa 223
           ||||||||||||||| ||||| ||||||||| |||||||| ||   || |||||||  ||
Sbjct: 225 cgacctcgacgacaccctgtatccgctgagcgccgggatcgcaggccatgtcaagaagaa 284

                                                                       
Query: 224 cattgaagcctacatggttgagaagctgggtattgaggagagcaagatcgaaaaccttgg 283
           ||||||||  |||||||||||||||||||||||||| |||| ||||||||| ||||| ||
Sbjct: 285 cattgaagattacatggttgagaagctgggtattgacgagaccaagatcgagaacctggg 344

                                                                       
Query: 284 caacctgctgtataagaactatggcaccacgatggccggcctcagggcaattggctacaa 343
           ||| |||||||| |||||||| |||||||||||||| || |||||||| || ||||||| 
Sbjct: 345 caatctgctgtacaagaactacggcaccacgatggctggactcagggccatcggctacag 404

                                                                       
Query: 344 cttcgattacgacgagtaccacagctttgtccatggaaggctgccctacgacaacatcaa 403
           |||||||||||| |||||||||  ||| |||||||||||| |||| ||||||||||||||
Sbjct: 405 cttcgattacgatgagtaccacgccttcgtccatggaaggttgccgtacgacaacatcaa 464

                                                                       
Query: 404 gcccgaccccgttctcaagcatattctcaagaacatgcgcatccgcaagctcattttcac 463
           ||| |||||| |||||||||| |||||||||||| ||||||||||||| ||||| |||||
Sbjct: 465 gcctgaccccattctcaagcacattctcaagaacctgcgcatccgcaaactcatattcac 524

                                                                       
Query: 464 caacggtgacatgatccatgccgtgagagccctcaagaggctgggcctggaggactgctt 523
           ||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caacggtgacatggtccacgccgtgagagccctcaagaggctgggcctggaggactgctt 584

                        
Query: 524 cgaggggatcatc 536
           |||||||||||||
Sbjct: 585 cgaggggatcatc 597



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>dbj|AK100173.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023026N03, full
           insert sequence
          Length = 1378

 Score =  498 bits (251), Expect = e-137
 Identities = 389/435 (89%)
 Strand = Plus / Plus

                                                                       
Query: 102 atcatggagttcgacgagcgctgcctcaaggtccaggaccccaagttcgactgcctgctc 161
           |||||||||||||| || ||||||| |||||||||||| ||||| |||||||||||||| 
Sbjct: 156 atcatggagttcgaagaccgctgccacaaggtccaggagcccaaattcgactgcctgctg 215

                                                                       
Query: 162 ttcgacctcgacgacactctgtacccgctgagctccgggatctcatcacacgtcaagacc 221
           || |||||||| |||||||||||||| |||||||| |||||| | || || |||||||  
Sbjct: 216 tttgacctcgatgacactctgtacccactgagctcggggatcgcgtcccatgtcaagaag 275

                                                                       
Query: 222 aacattgaagcctacatggttgagaagctgggtattgaggagagcaagatcgaaaacctt 281
           ||||||| ||  |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 276 aacattggagattacatggttgagaagctgggtattgaggagagcaagattgagaacctt 335

                                                                       
Query: 282 ggcaacctgctgtataagaactatggcaccacgatggccggcctcagggcaattggctac 341
           ||||| |||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 336 ggcaatctgctgtacaagaactacggcacgacgatggccggactcagggcaataggctac 395

                                                                       
Query: 342 aacttcgattacgacgagtaccacagctttgtccatggaaggctgccctacgacaacatc 401
           | |||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 396 agcttcgattacgatgagtaccacagttttgtccatggaagactgccctacgagaacatc 455

                                                                       
Query: 402 aagcccgaccccgttctcaagcatattctcaagaacatgcgcatccgcaagctcattttc 461
           ||||| ||||| || || ||||| |||||||||||| ||||||||||||| ||||| |||
Sbjct: 456 aagccggaccctgtcctgaagcacattctcaagaacctgcgcatccgcaaactcatattc 515

                                                                       
Query: 462 accaacggtgacatgatccatgccgtgagagccctcaagaggctgggcctggaggactgc 521
           |||||||| |||| |  ||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 516 accaacggcgacaaggaccacgccgtgagagccctcaagaggctggggctggaggactgc 575

                          
Query: 522 ttcgaggggatcatc 536
           |||||||||||||||
Sbjct: 576 ttcgaggggatcatc 590



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>dbj|AK059223.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-D05, full
           insert sequence
          Length = 1314

 Score =  498 bits (251), Expect = e-137
 Identities = 389/435 (89%)
 Strand = Plus / Plus

                                                                       
Query: 102 atcatggagttcgacgagcgctgcctcaaggtccaggaccccaagttcgactgcctgctc 161
           |||||||||||||| || ||||||| |||||||||||| ||||| |||||||||||||| 
Sbjct: 155 atcatggagttcgaagaccgctgccacaaggtccaggagcccaaattcgactgcctgctg 214

                                                                       
Query: 162 ttcgacctcgacgacactctgtacccgctgagctccgggatctcatcacacgtcaagacc 221
           || |||||||| |||||||||||||| |||||||| |||||| | || || |||||||  
Sbjct: 215 tttgacctcgatgacactctgtacccactgagctcggggatcgcgtcccatgtcaagaag 274

                                                                       
Query: 222 aacattgaagcctacatggttgagaagctgggtattgaggagagcaagatcgaaaacctt 281
           ||||||| ||  |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 275 aacattggagattacatggttgagaagctgggtattgaggagagcaagattgagaacctt 334

                                                                       
Query: 282 ggcaacctgctgtataagaactatggcaccacgatggccggcctcagggcaattggctac 341
           ||||| |||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 335 ggcaatctgctgtacaagaactacggcacgacgatggccggactcagggcaataggctac 394

                                                                       
Query: 342 aacttcgattacgacgagtaccacagctttgtccatggaaggctgccctacgacaacatc 401
           | |||||||||||| ||||||||||| |||||||||||||| ||||||||||| ||||||
Sbjct: 395 agcttcgattacgatgagtaccacagttttgtccatggaagactgccctacgagaacatc 454

                                                                       
Query: 402 aagcccgaccccgttctcaagcatattctcaagaacatgcgcatccgcaagctcattttc 461
           ||||| ||||| || || ||||| |||||||||||| ||||||||||||| ||||| |||
Sbjct: 455 aagccggaccctgtcctgaagcacattctcaagaacctgcgcatccgcaaactcatattc 514

                                                                       
Query: 462 accaacggtgacatgatccatgccgtgagagccctcaagaggctgggcctggaggactgc 521
           |||||||| |||| |  ||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 515 accaacggcgacaaggaccacgccgtgagagccctcaagaggctggggctggaggactgc 574

                          
Query: 522 ttcgaggggatcatc 536
           |||||||||||||||
Sbjct: 575 ttcgaggggatcatc 589



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>dbj|AK067356.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013103J23, full
           insert sequence
          Length = 1315

 Score =  468 bits (236), Expect = e-129
 Identities = 387/436 (88%), Gaps = 1/436 (0%)
 Strand = Plus / Plus

                                                                       
Query: 102 atcatggagttcgacgagcgctgcctcaaggtccaggaccccaagttcgactgcctgctc 161
           |||||||||||||| || ||||||| |||||||||||| ||||| |||||||||||||| 
Sbjct: 157 atcatggagttcgaagaccgctgccacaaggtccaggagcccaaattcgactgcctgctg 216

                                                                       
Query: 162 ttcgacctcgacgacactctgtacccgctgagctccgggatctcatcacacgtcaagacc 221
           || |||||||| ||||||||||| || |||||||| |||||| | || || |||||||  
Sbjct: 217 tttgacctcgatgacactctgtatccactgagctcggggatcgcgtcccatgtcaagaag 276

                                                                       
Query: 222 aacattgaagcctacatggttgagaagctgggtattgaggagagcaagatcgaaaacctt 281
           ||||||| ||  |||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 277 aacattggagattacatggttgagaagctgggtattgaggagagcaagattgagaacctt 336

                                                                       
Query: 282 ggcaacctgctgtataagaactatggcaccacgatggccggcctcagggcaattggctac 341
           ||||| |||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 337 ggcaatctgctgtacaagaactacggcacgacgatggccggactcagggcaataggctac 396

                                                                       
Query: 342 aacttcgattacgacgagtaccacagctttgtccatggaaggct-gccctacgacaacat 400
           | |||||||||||| ||||||||||| |||||||||||||| || ||||||||| |||||
Sbjct: 397 agcttcgattacgatgagtaccacagttttgtccatggaagactagccctacgagaacat 456

                                                                       
Query: 401 caagcccgaccccgttctcaagcatattctcaagaacatgcgcatccgcaagctcatttt 460
           |||||| ||||| || || ||||| |||||||||||| ||||||||||||| ||||| ||
Sbjct: 457 caagccggaccctgtcctgaagcacattctcaagaacctgcgcatccgcaaactcatatt 516

                                                                       
Query: 461 caccaacggtgacatgatccatgccgtgagagccctcaagaggctgggcctggaggactg 520
           ||||||||| |||| |  ||| |||||||||||||||||||||||||| ||||| |||||
Sbjct: 517 caccaacggcgacaaggaccacgccgtgagagccctcaagaggctggggctggaagactg 576

                           
Query: 521 cttcgaggggatcatc 536
           ||||||||||||||||
Sbjct: 577 cttcgaggggatcatc 592



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  137 bits (69), Expect = 4e-29
 Identities = 90/97 (92%)
 Strand = Plus / Plus

                                                                           
Query: 234     tacatggttgagaagctgggtattgaggagagcaagatcgaaaaccttggcaacctgctg 293
               |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 9175518 tacatggttgagaagctgggtattgaggagagcaagattgagaaccttggcaatctgctg 9175577

                                                    
Query: 294     tataagaactatggcaccacgatggccggcctcaggg 330
               || |||||||| ||||| ||||||||||| |||||||
Sbjct: 9175578 tacaagaactacggcacgacgatggccggactcaggg 9175614



 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                           
Query: 459     ttcaccaacggtgacatgatccatgccgtgagagccctcaagaggctgggcctggaggac 518
               ||||||||||| |||| |  ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 9176024 ttcaccaacggcgacaaggaccacgccgtgagagccctcaagaggctggggctggaggac 9176083

                                 
Query: 519     tgcttcgaggggatcatc 536
               ||||||||||||||||||
Sbjct: 9176084 tgcttcgaggggatcatc 9176101



 Score =  103 bits (52), Expect = 6e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                           
Query: 364     acagctttgtccatggaaggctgccctacgacaacatcaagcccgaccccgttctcaagc 423
               |||| |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 9175842 acagttttgtccatggaagactgccctacgagaacatcaagccggaccctgtcctgaagc 9175901

                                           
Query: 424     atattctcaagaacatgcgcatccgcaa 451
               | |||||||||||| |||||||||||||
Sbjct: 9175902 acattctcaagaacctgcgcatccgcaa 9175929



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                          
Query: 102     atcatggagttcgacgagcgctgcctcaaggtccaggaccccaagttcgactgcctgct 160
               |||||||||||||| || ||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 9175167 atcatggagttcgaagaccgctgccacaaggtccaggagcccaaattcgactgcctgct 9175225



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                           
Query: 165     gacctcgacgacactctgtacccgctgagctccgggatctcatcacacgtcaagaccaac 224
               |||||||| |||||||||||||| |||||||| |||||| | || || |||||||  |||
Sbjct: 9175356 gacctcgatgacactctgtacccactgagctcggggatcgcgtcccatgtcaagaagaac 9175415

                   
Query: 225     attg 228
               ||||
Sbjct: 9175416 attg 9175419



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                      
Query: 329     ggcaattggctacaacttcgattacgacgagtaccacag 367
               |||||| ||||||| |||||||||||| |||||||||||
Sbjct: 9175721 ggcaataggctacagcttcgattacgatgagtaccacag 9175759



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 165      gacctcgacgacactctgtacccg 188
                |||||||||||||| |||||||||
Sbjct: 27851990 gacctcgacgacacgctgtacccg 27852013



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>gb|AC107315.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0032O19, from chromosome 3, complete sequence
          Length = 142248

 Score =  137 bits (69), Expect = 4e-29
 Identities = 90/97 (92%)
 Strand = Plus / Minus

                                                                          
Query: 234    tacatggttgagaagctgggtattgaggagagcaagatcgaaaaccttggcaacctgctg 293
              |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 110873 tacatggttgagaagctgggtattgaggagagcaagattgagaaccttggcaatctgctg 110814

                                                   
Query: 294    tataagaactatggcaccacgatggccggcctcaggg 330
              || |||||||| ||||| ||||||||||| |||||||
Sbjct: 110813 tacaagaactacggcacgacgatggccggactcaggg 110777



 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Minus

                                                                          
Query: 459    ttcaccaacggtgacatgatccatgccgtgagagccctcaagaggctgggcctggaggac 518
              ||||||||||| |||| |  ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 110367 ttcaccaacggcgacaaggaccacgccgtgagagccctcaagaggctggggctggaggac 110308

                                
Query: 519    tgcttcgaggggatcatc 536
              ||||||||||||||||||
Sbjct: 110307 tgcttcgaggggatcatc 110290



 Score =  103 bits (52), Expect = 6e-19
 Identities = 79/88 (89%)
 Strand = Plus / Minus

                                                                          
Query: 364    acagctttgtccatggaaggctgccctacgacaacatcaagcccgaccccgttctcaagc 423
              |||| |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 110549 acagttttgtccatggaagactgccctacgagaacatcaagccggaccctgtcctgaagc 110490

                                          
Query: 424    atattctcaagaacatgcgcatccgcaa 451
              | |||||||||||| |||||||||||||
Sbjct: 110489 acattctcaagaacctgcgcatccgcaa 110462



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Minus

                                                                         
Query: 102    atcatggagttcgacgagcgctgcctcaaggtccaggaccccaagttcgactgcctgct 160
              |||||||||||||| || ||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 111224 atcatggagttcgaagaccgctgccacaaggtccaggagcccaaattcgactgcctgct 111166



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 165    gacctcgacgacactctgtacccgctgagctccgggatctcatcacacgtcaagaccaac 224
              |||||||| |||||||||||||| |||||||| |||||| | || || |||||||  |||
Sbjct: 111035 gacctcgatgacactctgtacccactgagctcggggatcgcgtcccatgtcaagaagaac 110976

                  
Query: 225    attg 228
              ||||
Sbjct: 110975 attg 110972



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                     
Query: 329    ggcaattggctacaacttcgattacgacgagtaccacag 367
              |||||| ||||||| |||||||||||| |||||||||||
Sbjct: 110670 ggcaataggctacagcttcgattacgatgagtaccacag 110632



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>gb|AC134238.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0016G06,
              complete sequence
          Length = 119910

 Score =  137 bits (69), Expect = 4e-29
 Identities = 90/97 (92%)
 Strand = Plus / Plus

                                                                          
Query: 234    tacatggttgagaagctgggtattgaggagagcaagatcgaaaaccttggcaacctgctg 293
              |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 118698 tacatggttgagaagctgggtattgaggagagcaagattgagaaccttggcaatctgctg 118757

                                                   
Query: 294    tataagaactatggcaccacgatggccggcctcaggg 330
              || |||||||| ||||| ||||||||||| |||||||
Sbjct: 118758 tacaagaactacggcacgacgatggccggactcaggg 118794



 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                          
Query: 459    ttcaccaacggtgacatgatccatgccgtgagagccctcaagaggctgggcctggaggac 518
              ||||||||||| |||| |  ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 119204 ttcaccaacggcgacaaggaccacgccgtgagagccctcaagaggctggggctggaggac 119263

                                
Query: 519    tgcttcgaggggatcatc 536
              ||||||||||||||||||
Sbjct: 119264 tgcttcgaggggatcatc 119281



 Score =  103 bits (52), Expect = 6e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                          
Query: 364    acagctttgtccatggaaggctgccctacgacaacatcaagcccgaccccgttctcaagc 423
              |||| |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 119022 acagttttgtccatggaagactgccctacgagaacatcaagccggaccctgtcctgaagc 119081

                                          
Query: 424    atattctcaagaacatgcgcatccgcaa 451
              | |||||||||||| |||||||||||||
Sbjct: 119082 acattctcaagaacctgcgcatccgcaa 119109



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                         
Query: 102    atcatggagttcgacgagcgctgcctcaaggtccaggaccccaagttcgactgcctgct 160
              |||||||||||||| || ||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 118347 atcatggagttcgaagaccgctgccacaaggtccaggagcccaaattcgactgcctgct 118405



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                          
Query: 165    gacctcgacgacactctgtacccgctgagctccgggatctcatcacacgtcaagaccaac 224
              |||||||| |||||||||||||| |||||||| |||||| | || || |||||||  |||
Sbjct: 118536 gacctcgatgacactctgtacccactgagctcggggatcgcgtcccatgtcaagaagaac 118595

                  
Query: 225    attg 228
              ||||
Sbjct: 118596 attg 118599



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 329    ggcaattggctacaacttcgattacgacgagtaccacag 367
              |||||| ||||||| |||||||||||| |||||||||||
Sbjct: 118901 ggcaataggctacagcttcgattacgatgagtaccacag 118939



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  137 bits (69), Expect = 4e-29
 Identities = 90/97 (92%)
 Strand = Plus / Plus

                                                                           
Query: 234     tacatggttgagaagctgggtattgaggagagcaagatcgaaaaccttggcaacctgctg 293
               |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||
Sbjct: 9173351 tacatggttgagaagctgggtattgaggagagcaagattgagaaccttggcaatctgctg 9173410

                                                    
Query: 294     tataagaactatggcaccacgatggccggcctcaggg 330
               || |||||||| ||||| ||||||||||| |||||||
Sbjct: 9173411 tacaagaactacggcacgacgatggccggactcaggg 9173447



 Score =  107 bits (54), Expect = 4e-20
 Identities = 72/78 (92%)
 Strand = Plus / Plus

                                                                           
Query: 459     ttcaccaacggtgacatgatccatgccgtgagagccctcaagaggctgggcctggaggac 518
               ||||||||||| |||| |  ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 9173857 ttcaccaacggcgacaaggaccacgccgtgagagccctcaagaggctggggctggaggac 9173916

                                 
Query: 519     tgcttcgaggggatcatc 536
               ||||||||||||||||||
Sbjct: 9173917 tgcttcgaggggatcatc 9173934



 Score =  103 bits (52), Expect = 6e-19
 Identities = 79/88 (89%)
 Strand = Plus / Plus

                                                                           
Query: 364     acagctttgtccatggaaggctgccctacgacaacatcaagcccgaccccgttctcaagc 423
               |||| |||||||||||||| ||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 9173675 acagttttgtccatggaagactgccctacgagaacatcaagccggaccctgtcctgaagc 9173734

                                           
Query: 424     atattctcaagaacatgcgcatccgcaa 451
               | |||||||||||| |||||||||||||
Sbjct: 9173735 acattctcaagaacctgcgcatccgcaa 9173762



 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 54/59 (91%)
 Strand = Plus / Plus

                                                                          
Query: 102     atcatggagttcgacgagcgctgcctcaaggtccaggaccccaagttcgactgcctgct 160
               |||||||||||||| || ||||||| |||||||||||| ||||| ||||||||||||||
Sbjct: 9173000 atcatggagttcgaagaccgctgccacaaggtccaggagcccaaattcgactgcctgct 9173058



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Plus

                                                                           
Query: 165     gacctcgacgacactctgtacccgctgagctccgggatctcatcacacgtcaagaccaac 224
               |||||||| |||||||||||||| |||||||| |||||| | || || |||||||  |||
Sbjct: 9173189 gacctcgatgacactctgtacccactgagctcggggatcgcgtcccatgtcaagaagaac 9173248

                   
Query: 225     attg 228
               ||||
Sbjct: 9173249 attg 9173252



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                      
Query: 329     ggcaattggctacaacttcgattacgacgagtaccacag 367
               |||||| ||||||| |||||||||||| |||||||||||
Sbjct: 9173554 ggcaataggctacagcttcgattacgatgagtaccacag 9173592



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 165      gacctcgacgacactctgtacccg 188
                |||||||||||||| |||||||||
Sbjct: 27943314 gacctcgacgacacgctgtacccg 27943337



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>emb|AJ237988.1|VVI237988 Vitis vinifera mRNA for putative ripening-related protein (grip21
           gene)
          Length = 1190

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 92/113 (81%)
 Strand = Plus / Plus

                                                                       
Query: 225 attgaagcctacatggttgagaagctgggtattgaggagagcaagatcgaaaaccttggc 284
           ||||||| ||| |||||||| ||||| || || ||| ||| ||| ||||   || | |||
Sbjct: 227 attgaagactatatggttgaaaagcttggcatagagaagaacaaaatcgctgacttgggc 286

                                                                
Query: 285 aacctgctgtataagaactatggcaccacgatggccggcctcagggcaattgg 337
           ||||| ||||| ||||| ||||| || || |||||||| ||||||||||||||
Sbjct: 287 aacctactgtacaagaattatgggacaacaatggccggtctcagggcaattgg 339



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>ref|XM_469419.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1219

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 147 ttcgactgcctgctcttcgacctcgacgacactctgtacccg 188
           ||||||||| | ||||| |||||||||||||| |||||||||
Sbjct: 118 ttcgactgcgtcctctttgacctcgacgacacgctgtacccg 159



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>dbj|AK099563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013034L20, full
           insert sequence
          Length = 1147

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 147 ttcgactgcctgctcttcgacctcgacgacactctgtacccg 188
           ||||||||| | ||||| |||||||||||||| |||||||||
Sbjct: 117 ttcgactgcgtcctctttgacctcgacgacacgctgtacccg 158



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>dbj|AK061982.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-A11, full
           insert sequence
          Length = 1144

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 147 ttcgactgcctgctcttcgacctcgacgacactctgtacccg 188
           ||||||||| | ||||| |||||||||||||| |||||||||
Sbjct: 118 ttcgactgcgtcctctttgacctcgacgacacgctgtacccg 159



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>dbj|AK061528.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D11, full
           insert sequence
          Length = 1112

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 147 ttcgactgcctgctcttcgacctcgacgacactctgtacccg 188
           ||||||||| | ||||| |||||||||||||| |||||||||
Sbjct: 101 ttcgactgcgtcctctttgacctcgacgacacgctgtacccg 142



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>gb|AY108507.1| Zea mays PCO092437 mRNA sequence
          Length = 1277

 Score = 44.1 bits (22), Expect = 0.46
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 147 ttcgactgcctgctcttcgacctcgacgacactctgtacccg 188
           ||||||||| | ||| | |||||||||||||| |||||||||
Sbjct: 138 ttcgactgcgtcctcctagacctcgacgacaccctgtacccg 179



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>gb|AC108919.7| Mus musculus chromosome 6, clone RP23-52O21, complete sequence
          Length = 141653

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 10    caaggctccacacacctctgccttc 34
             ||||| |||||||||||||||||||
Sbjct: 87739 caaggatccacacacctctgccttc 87763



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>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5'
              end of the ENG gene for endoglin (Osler-Rendu-Weber
              syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for
              adenylate kinase 1, the ST6GALNAC6 gene for
              CMP-NeuAC:(beta)-N-acetylgalactosaminide
              (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the
              SIAT7D gene for sialyltransferase 7D
              ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1,
              3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase)
              (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for
              dolichyl-phosphate mannosyltransferase polypeptide 2,
              regulatory subunit (MGC21559), the gene for a novel protien
              containing FLJ00179, a novel gene and ten CpG islands,
              complete sequence
          Length = 164201

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 495    ctcaagaggctgggcctggaggactgctt 523
              |||||||| ||||| ||||||||||||||
Sbjct: 139696 ctcaagagactgggactggaggactgctt 139724



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>emb|AL033520.16|HS349A12 Human DNA sequence from clone RP3-349A12 on chromosome 6p21.31-22.2
             Contains the 3' end of gene FLJ20302, the TAF11 gene for
             TAF11 RNA polymerase II (TATA box binding protein
             (TBP)-associated factor, 28 kD), the 5' end of gene
             KIAA0229 for  novel Ank, SAM (Sterile alpha motif) and
             Phosphotyrosine interaction (PTB/PID) domain containing
             protein (KIAA0229) and a CpG island, complete sequence
          Length = 132948

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 495   ctcaagaggctgggcctggaggactgctt 523
             |||||||||||||| | ||||||||||||
Sbjct: 77572 ctcaagaggctggggcaggaggactgctt 77544



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>dbj|AK001094.1| Homo sapiens cDNA FLJ10232 fis, clone HEMBB1000244
          Length = 1654

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 495 ctcaagaggctgggcctggaggactgctt 523
           |||||||| ||||| ||||||||||||||
Sbjct: 100 ctcaagagactgggactggaggactgctt 72



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>gb|AC132812.9| Homo sapiens chromosome 17, clone RP13-104F24, complete sequence
          Length = 161139

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 495    ctcaagaggctgggcctggaggactgctt 523
              |||||||||||| | ||||||||||||||
Sbjct: 137334 ctcaagaggctgaggctggaggactgctt 137306



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>dbj|AP002992.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2655K5, complete
             sequence
          Length = 191589

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 495   ctcaagaggctgggcctggaggactgctt 523
             |||||||||||||| | ||||||||||||
Sbjct: 69861 ctcaagaggctggggcaggaggactgctt 69833



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>dbj|AP002813.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-856M9, complete
            sequence
          Length = 187516

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 495  ctcaagaggctgggcctggaggactgctt 523
            |||||||||||||| | ||||||||||||
Sbjct: 7652 ctcaagaggctggggcaggaggactgctt 7624



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>gb|AC009994.10| Homo sapiens chromosome 17, clone RP11-87N3, complete sequence
          Length = 188552

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 495   ctcaagaggctgggcctggaggactgctt 523
             |||||||||||| | ||||||||||||||
Sbjct: 28618 ctcaagaggctgaggctggaggactgctt 28590



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>gb|AC150242.3| Rhinolophus ferrumequinum clone VMRC7-331J24, complete sequence
          Length = 120894

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   aagcatattctcaagaacat 439
             ||||||||||||||||||||
Sbjct: 90123 aagcatattctcaagaacat 90142



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>gb|AC093017.10| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0024B16
             map S2606, complete sequence
          Length = 124140

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 165   gacctcgacgacactctgtacccg 188
             |||||||||||||| |||||||||
Sbjct: 96120 gacctcgacgacacgctgtacccg 96143



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>gb|AY657496.1| Synthetic construct Peudomonas aeruginosa clone FLH040552.01F
           PA1143 gene, partial cds
          Length = 654

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 159 ctcttcgacctcgacgacac 178
           ||||||||||||||||||||
Sbjct: 13  ctcttcgacctcgacgacac 32



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>ref|XM_959852.1| Neurospora crassa OR74A hypothetical protein (NCU00789.1) partial
            mRNA
          Length = 2793

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 264  agcaagatcgaaaaccttgg 283
            ||||||||||||||||||||
Sbjct: 1726 agcaagatcgaaaaccttgg 1745



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>ref|XM_324968.1| Neurospora crassa OR74A hypothetical protein (NCU00789.1) partial
            mRNA
          Length = 2793

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 264  agcaagatcgaaaaccttgg 283
            ||||||||||||||||||||
Sbjct: 1726 agcaagatcgaaaaccttgg 1745



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>gb|AC122405.4| Mus musculus BAC clone RP24-119O6 from chromosome 12, complete sequence
          Length = 196285

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 496    tcaagaggctgggcctggag 515
              ||||||||||||||||||||
Sbjct: 185226 tcaagaggctgggcctggag 185207



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>ref|XM_785414.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC585596 (LOC585596), mRNA
          Length = 795

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 361 accacagctttgtccatgga 380
           ||||||||||||||||||||
Sbjct: 59  accacagctttgtccatgga 40



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>emb|BX842680.1| Neurospora crassa DNA linkage group I cosmid contig 90C4
          Length = 131439

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 264   agcaagatcgaaaaccttgg 283
             ||||||||||||||||||||
Sbjct: 10012 agcaagatcgaaaaccttgg 9993



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>emb|BX572594.1| Rhodopseudomonas palustris CGA009 complete genome; segment 2/16
          Length = 348971

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 162    ttcgacctcgacgacactctgtacccgc 189
              |||||||||||| |||| ||||||||||
Sbjct: 345715 ttcgacctcgacaacacgctgtacccgc 345688



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>gb|AC155227.3| Rhinolophus ferrumequinum clone VMRC7-4K1, complete sequence
          Length = 160979

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   aagcatattctcaagaacat 439
             ||||||||||||||||||||
Sbjct: 38535 aagcatattctcaagaacat 38554



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>gb|AC115778.11| Mus musculus chromosome 8, clone RP23-148F13, complete sequence
          Length = 234778

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     ctccacacacctctgccttc 34
              ||||||||||||||||||||
Sbjct: 149059 ctccacacacctctgccttc 149078



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>emb|BX323041.9| Zebrafish DNA sequence from clone RP71-82P7 in linkage group 7,
             complete sequence
          Length = 146935

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 400   tcaagcccgaccccgttctcaagc 423
             |||||||||| |||||||||||||
Sbjct: 17675 tcaagcccgagcccgttctcaagc 17698



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>gb|AF035381.1|AF035381 Lytechinus variegatus ovoperoxidase (LvOpo) mRNA, complete cds
          Length = 3167

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  aaccttggcaacctgctgta 295
            ||||||||||||||||||||
Sbjct: 1717 aaccttggcaacctgctgta 1698



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>gb|DP000028.1| Rhinolophus ferrumequinum target 1 genomic scaffold
          Length = 1756392

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     aagcatattctcaagaacat 439
               ||||||||||||||||||||
Sbjct: 1371203 aagcatattctcaagaacat 1371222



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>gb|AE004544.1| Pseudomonas aeruginosa PAO1, section 105 of 529 of the complete
            genome
          Length = 11478

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  ctcttcgacctcgacgacac 178
            ||||||||||||||||||||
Sbjct: 3560 ctcttcgacctcgacgacac 3541


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,671,553
Number of Sequences: 3902068
Number of extensions: 3671553
Number of successful extensions: 62912
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62738
Number of HSP's gapped (non-prelim): 173
length of query: 536
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 513
effective length of database: 17,143,297,704
effective search space: 8794511722152
effective search space used: 8794511722152
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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