| Clone Name | baal8e22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X78877.1|HVACXPII3 Hordeum vulgare L. (Alexis) mRNA for serine carboxypeptidase II-3 Length = 1979 Score = 1164 bits (587), Expect = 0.0 Identities = 600/603 (99%), Gaps = 1/603 (0%) Strand = Plus / Plus Query: 10 ccgccacgcatccccggcc-tcaacctcaaaggcatcatgattgggaacgcggtgatcaa 68 ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| Sbjct: 834 ccgccacgcatccccggacatcaacctcaaaggcatcatgattgggaacgcggtgatcaa 893 Query: 69 cgactggacggacagcaagggcatgtacgacttcttctggacgcacgcgctcatctccga 128 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 894 cgactggacggacagcaaaggcatgtacgacttcttctggacgcacgcgctcatctccga 953 Query: 129 cgagacggccgacggcatcagcaagaactgcaacttcacggcctacggcgccggcgtggc 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 954 cgagacggccgacggcatcagcaagaactgcaacttcacggcctacggcgccggcgtggc 1013 Query: 189 gtcgaacgcgctctgcgacgccgcctcggacgaggtcggcgagagcctcgcggacatcga 248 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1014 gtcgaacgcgctctgcgacgccgcctcggacgaggtcggcgagagcctcgcggacatcga 1073 Query: 249 catctacaacatctacgcgcccaactgccagtcggagaagctcgtcacgccgcccatcgc 308 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1074 catctacaacatctacgcgcccaactgccagtcggagaagctcgtcacgccgcccatcgc 1133 Query: 309 cccctcgatcgacaactttgatccgtgcacggactactacgtggaggcgtacctcaaccg 368 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1134 cccctcgatcgacaactttgatccgtgcacggactactacgtggaggcgtacctcaaccg 1193 Query: 369 gccggacgtgcagaaggcgctgcacgccaacgtcacccgcctcgaccacccctggtcagc 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1194 gccggacgtgcagaaggcgctgcacgccaacgtcacccgcctcgaccacccctggtcagc 1253 Query: 429 ctgcagtgacgtcttgacacgctgggtcgacagcgccaaaactgtcctgcctattatcca 488 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1254 ctgcagtgacgtcttgacacgctgggtcgacagcgccaaaactgtcctgcctattatcca 1313 Query: 489 ggagctgatgaagaacagcatccgggtctgggtttacagtggagacactgatgggagagt 548 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1314 ggagctgatgaagaacagcatccgggtctgggtttacagtggagacactgatgggagagt 1373 Query: 549 gcccgtcacttccagtagactctctgtcaaccagctccagctccctgtggcggcaaaatg 608 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1374 gcccgtcacttccagtagactctctgtcaaccagctccagctccctgtggcggcaaaatg 1433 Query: 609 gag 611 ||| Sbjct: 1434 gag 1436
>gb|AY106653.1| Zea mays PCO089814 mRNA sequence Length = 618 Score = 293 bits (148), Expect = 3e-76 Identities = 302/354 (85%) Strand = Plus / Plus Query: 240 ggacatcgacatctacaacatctacgcgcccaactgccagtcggagaagctcgtcacgcc 299 |||||||||||||||||||||||||||||||||||||||||| |||||| |||| Sbjct: 194 ggacatcgacatctacaacatctacgcgcccaactgccagtcccccggcctcgtctcgcc 253 Query: 300 gcccatcgccccctcgatcgacaactttgatccgtgcacggactactacgtggaggcgta 359 ||||||| |||| ||||| |||||||||||||||||| |||| || |||||||| || || Sbjct: 254 gcccatcaccccgtcgatggacaactttgatccgtgctcggattattacgtggaagccta 313 Query: 360 cctcaaccggccggacgtgcagaaggcgctgcacgccaacgtcacccgcctcgaccaccc 419 ||||||| ||||||||||||| |||||| ||||||||||||||||||||||||||||| Sbjct: 314 cctcaacgacccggacgtgcagagggcgctccacgccaacgtcacccgcctcgaccaccc 373 Query: 420 ctggtcagcctgcagtgacgtcttgacacgctgggtcgacagcgccaaaactgtcctgcc 479 |||||| |||||||| || ||||||| ||||||| |||||||||| || |||||||| Sbjct: 374 ctggtccgcctgcagcgatgtcttgagacgctggactgacagcgccacgaccgtcctgcc 433 Query: 480 tattatccaggagctgatgaagaacagcatccgggtctgggtttacagtggagacactga 539 |||| || |||||| | || ||| |||| |||||||||| |||| ||||||||| || Sbjct: 434 tattctcacggagctcctcaacaacgacatcagggtctgggtgtacantggagacaccga 493 Query: 540 tgggagagtgcccgtcacttccagtagactctctgtcaaccagctccagctccc 593 ||||| |||||| ||||||||||| || ||| || ||||||||||||||||| Sbjct: 494 tggganagtgccggtcacttccagcaggtactccgtgaaccagctccagctccc 547 Score = 153 bits (77), Expect = 8e-34 Identities = 95/101 (94%) Strand = Plus / Plus Query: 66 caacgactggacggacagcaagggcatgtacgacttcttctggacgcacgcgctcatctc 125 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 14 caacgactggacggacaccaagggcatgtacgacttcttctggacgcacgcgctcatctc 73 Query: 126 cgacgagacggccgacggcatcagcaagaactgcaacttca 166 ||||| ||||||||||| |||| ||| | |||||||||||| Sbjct: 74 cgacgcgacggccgacgccatcggcaggcactgcaacttca 114
>ref|NM_185973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1575 Score = 222 bits (112), Expect = 1e-54 Identities = 250/296 (84%) Strand = Plus / Plus Query: 290 tcgtcacgccgcccatcgccccctcgatcgacaactttgatccgtgcacggactactacg 349 ||||| ||||||| || |||||||||| || | |||||||||||||||||| ||||| | Sbjct: 1055 tcgtctcgccgccggtcaccccctcgattgagagctttgatccgtgcacggattactatg 1114 Query: 350 tggaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgtcacccgcc 409 ||||||| ||||||||| || || ||||| |||||||||||||| ||| ||||| | | Sbjct: 1115 tggaggcctacctcaacaaccctgatgtgcaaaaggcgctgcacgcaaacatcaccaggc 1174 Query: 410 tcgaccacccctggtcagcctgcagtgacgtcttgacacgctgggtcgacagcgccaaaa 469 | || ||||| ||||| || ||||||| ||||||| |||||||||||||||||| || Sbjct: 1175 ttgatcacccgtggtccgcttgcagtggagtcttgagacgctgggtcgacagcgcttcaa 1234 Query: 470 ctgtcctgcctattatccaggagctgatgaagaacagcatccgggtctgggtttacagtg 529 | || ||||| |||||| ||||||| ||||||||| |||| | |||||||| ||||||| Sbjct: 1235 cggttctgcccattatcaaggagctcctgaagaacaacatcagagtctgggtgtacagtg 1294 Query: 530 gagacactgatgggagagtgcccgtcacttccagtagactctctgtcaaccagctc 585 ||||||||||||||||||| || ||||||||||| ||| |||||||||||||||| Sbjct: 1295 gagacactgatgggagagtacctgtcacttccagcagatactctgtcaaccagctc 1350 Score = 204 bits (103), Expect = 2e-49 Identities = 130/139 (93%) Strand = Plus / Plus Query: 29 tcaacctcaaaggcatcatgattgggaacgcggtgatcaacgactggacggacagcaagg 88 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 800 tcaacctcaaaggcatcatgattgggaacgcggtgatcaacgactggacggacacaaagg 859 Query: 89 gcatgtacgacttcttctggacgcacgcgctcatctccgacgagacggccgacggcatca 148 | |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 860 ggatgtacgacttcttctggacgcacgcgctcatctccgacgaggccaacgacggcatca 919 Query: 149 gcaagaactgcaacttcac 167 |||| ||||||||||||| Sbjct: 920 ccaagcactgcaacttcac 938 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 240 ggacatcgacatctacaacatctacgcgcccaactgccagtcg 282 ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 1002 ggacatcgacatctacaacatctacgcccccaactgccagtcg 1044
>gb|AY224473.1| Oryza sativa (japonica cultivar-group) isolate 29039 serine carboxypepsidase mRNA, partial cds Length = 1338 Score = 214 bits (108), Expect = 3e-52 Identities = 235/278 (84%) Strand = Plus / Plus Query: 308 ccccctcgatcgacaactttgatccgtgcacggactactacgtggaggcgtacctcaacc 367 |||||||||| || | |||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 836 ccccctcgattgagagctttgatccgtgcacggattactatgtggaggcctacctcaaca 895 Query: 368 ggccggacgtgcagaaggcgctgcacgccaacgtcacccgcctcgaccacccctggtcag 427 || || ||||| |||||||||||||| ||| ||||| | || || ||||| ||||| | Sbjct: 896 accctgatgtgcaaaaggcgctgcacgcaaacatcaccaggcttgatcacccgtggtccg 955 Query: 428 cctgcagtgacgtcttgacacgctgggtcgacagcgccaaaactgtcctgcctattatcc 487 | ||||||| ||||||| |||||||||||||||||| ||| || ||||| |||||| Sbjct: 956 cttgcagtggagtcttgagacgctgggtcgacagcgcttcaacggttctgcccattatca 1015 Query: 488 aggagctgatgaagaacagcatccgggtctgggtttacagtggagacactgatgggagag 547 ||||||| | ||||||| |||| | |||||||| ||||||||||||||||||||||||| Sbjct: 1016 aggagctcctkaagaacaacatcagagtctgggtgtacagtggagacactgatgggagag 1075 Query: 548 tgcccgtcacttccagtagactctctgtcaaccagctc 585 | || ||||||||||| ||| |||||||||||||||| Sbjct: 1076 tacctgtcacttccagcagatactctgtcaaccagctc 1113 Score = 188 bits (95), Expect = 1e-44 Identities = 129/139 (92%), Gaps = 1/139 (0%) Strand = Plus / Plus Query: 29 tcaacctcaaaggcatcatgattgggaacgcggtgatcaacgactggacggacagcaagg 88 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||| Sbjct: 564 tcaacctcaaaggcatcatgattgggaacgcggtgatcaacgactggacg-acacaaagg 622 Query: 89 gcatgtacgacttcttctggacgcacgcgctcatctccgacgagacggccgacggcatca 148 | |||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct: 623 ggatgtacgacttcttctggacgcacgcgctcatctccgacgaggccaacgacggcatca 682 Query: 149 gcaagaactgcaacttcac 167 |||| ||||||||||||| Sbjct: 683 ccaagcactgcaacttcac 701 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Plus Query: 240 ggacatcgacatctacaacatctacgcgcccaactgccagtcg 282 ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 765 ggacatcgacatctacaacatctacgcccccaactgccagtcg 807
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 48 gattgggaacgcggtgatcaacgactggacggacagcaagggcatgtacgacttcttctg 107 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 27588747 gattgggaacgcggtgatcaacgactggacggacacaaaggggatgtacgacttcttctg 27588688 Query: 108 gacgcacgcgctcatctccgacgagacggccgacggcatcagcaagaactgcaacttcac 167 ||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||||| Sbjct: 27588687 gacgcacgcgctcatctccgacgaggccaacgacggcatcaccaagcactgcaacttcac 27588628 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 525 cagtggagacactgatgggagagtgcccgtcacttccagtagactctctgtcaaccagct 584 |||||||||||||||||||||||| || ||||||||||| ||| ||||||||||||||| Sbjct: 27586094 cagtggagacactgatgggagagtacctgtcacttccagcagatactctgtcaaccagct 27586035 Query: 585 c 585 | Sbjct: 27586034 c 27586034 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 240 ggacatcgacatctacaacatctacgcgcccaactgccagtcg 282 ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 27588564 ggacatcgacatctacaacatctacgcccccaactgccagtcg 27588522 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 324 ctttgatccgtgcacggactactacgtggaggcgtacctcaaccggccggacgtgcagaa 383 |||||||||||||||||| ||||| |||||||| ||||||||| || || ||||| || Sbjct: 27587950 ctttgatccgtgcacggattactatgtggaggcctacctcaacaaccctgatgtgcaaaa 27587891 Query: 384 ggcgctgcacgccaacgtcacccgcctcgaccacccctggtcagcctgcag 434 |||||||||||| ||| ||||| | || || ||||| ||||| || ||||| Sbjct: 27587890 ggcgctgcacgcaaacatcaccaggcttgatcacccgtggtccgcttgcag 27587840 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 430 tgcagtgacgtcttgacacgctgggtcgacagcgccaaaactgtcctgcctattatccag 489 ||||||| ||||||| |||||||||||||||||| ||| || ||||| |||||| || Sbjct: 27586343 tgcagtggagtcttgagacgctgggtcgacagcgcttcaacggttctgcccattatcaag 27586284 Query: 490 gagctgatgaagaacagcatccgggtctgggtttacag 527 ||||| ||||||||| |||| | |||||||| ||||| Sbjct: 27586283 gagctcctgaagaacaacatcagagtctgggtgtacag 27586246 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tcaacctcaaaggcatcatg 48 |||||||||||||||||||| Sbjct: 27589245 tcaacctcaaaggcatcatg 27589226
>dbj|AP005184.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0047B07 Length = 157797 Score = 167 bits (84), Expect = 5e-38 Identities = 111/120 (92%) Strand = Plus / Minus Query: 48 gattgggaacgcggtgatcaacgactggacggacagcaagggcatgtacgacttcttctg 107 ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct: 45740 gattgggaacgcggtgatcaacgactggacggacacaaaggggatgtacgacttcttctg 45681 Query: 108 gacgcacgcgctcatctccgacgagacggccgacggcatcagcaagaactgcaacttcac 167 ||||||||||||||||||||||||| | ||||||||||| |||| ||||||||||||| Sbjct: 45680 gacgcacgcgctcatctccgacgaggccaacgacggcatcaccaagcactgcaacttcac 45621 Score = 81.8 bits (41), Expect = 2e-12 Identities = 56/61 (91%) Strand = Plus / Minus Query: 525 cagtggagacactgatgggagagtgcccgtcacttccagtagactctctgtcaaccagct 584 |||||||||||||||||||||||| || ||||||||||| ||| ||||||||||||||| Sbjct: 43087 cagtggagacactgatgggagagtacctgtcacttccagcagatactctgtcaaccagct 43028 Query: 585 c 585 | Sbjct: 43027 c 43027 Score = 77.8 bits (39), Expect = 4e-11 Identities = 42/43 (97%) Strand = Plus / Minus Query: 240 ggacatcgacatctacaacatctacgcgcccaactgccagtcg 282 ||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 45557 ggacatcgacatctacaacatctacgcccccaactgccagtcg 45515 Score = 77.8 bits (39), Expect = 4e-11 Identities = 93/111 (83%) Strand = Plus / Minus Query: 324 ctttgatccgtgcacggactactacgtggaggcgtacctcaaccggccggacgtgcagaa 383 |||||||||||||||||| ||||| |||||||| ||||||||| || || ||||| || Sbjct: 44943 ctttgatccgtgcacggattactatgtggaggcctacctcaacaaccctgatgtgcaaaa 44884 Query: 384 ggcgctgcacgccaacgtcacccgcctcgaccacccctggtcagcctgcag 434 |||||||||||| ||| ||||| | || || ||||| ||||| || ||||| Sbjct: 44883 ggcgctgcacgcaaacatcaccaggcttgatcacccgtggtccgcttgcag 44833 Score = 67.9 bits (34), Expect = 4e-08 Identities = 82/98 (83%) Strand = Plus / Minus Query: 430 tgcagtgacgtcttgacacgctgggtcgacagcgccaaaactgtcctgcctattatccag 489 ||||||| ||||||| |||||||||||||||||| ||| || ||||| |||||| || Sbjct: 43336 tgcagtggagtcttgagacgctgggtcgacagcgcttcaacggttctgcccattatcaag 43277 Query: 490 gagctgatgaagaacagcatccgggtctgggtttacag 527 ||||| ||||||||| |||| | |||||||| ||||| Sbjct: 43276 gagctcctgaagaacaacatcagagtctgggtgtacag 43239 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tcaacctcaaaggcatcatg 48 |||||||||||||||||||| Sbjct: 46238 tcaacctcaaaggcatcatg 46219
>gb|AY108013.1| Zea mays PCO089815 mRNA sequence Length = 453 Score = 105 bits (53), Expect = 2e-19 Identities = 92/105 (87%) Strand = Plus / Plus Query: 507 catccgggtctgggtttacagtggagacactgatgggagagtgcccgtcacttccagtag 566 |||| |||||||||| |||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 15 catcagggtctgggtgtacagtggagacaccgatgggagagtgccggtcacttccagcag 74 Query: 567 actctctgtcaaccagctccagctccctgtggcggcaaaatggag 611 ||| || ||||||||||||||||| || || ||||||||||| Sbjct: 75 gtactccgtgaaccagctccagctcccagttgccgcaaaatggag 119
>ref|XM_466920.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1807 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 1199 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 1248
>ref|XM_507511.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1 mRNA Length = 1701 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 1076 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 1125
>ref|XM_507510.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1 mRNA Length = 1704 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 1079 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 1128
>ref|XM_506875.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1643_A10.33-1 mRNA Length = 1720 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 1081 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 1130
>gb|AC136522.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0037H03, complete sequence Length = 185881 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 363 caaccggccggacgtgcagaaggcgctgcacgccaacgtcac 404 |||||||||||| ||||||| |||||| |||||||||||||| Sbjct: 73063 caaccggccggaagtgcagagggcgctccacgccaacgtcac 73022
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 363 caaccggccggacgtgcagaaggcgctgcacgccaacgtcac 404 |||||||||||| ||||||| |||||| |||||||||||||| Sbjct: 10688463 caaccggccggaagtgcagagggcgctccacgccaacgtcac 10688422
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 25467683 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 25467732
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 123345 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 123394
>dbj|AP004069.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1626_B09 Length = 58749 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 12233 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 12282
>dbj|AK107270.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-H11, full insert sequence Length = 1608 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 363 caaccggccggacgtgcagaaggcgctgcacgccaacgtcac 404 |||||||||||| ||||||| |||||| |||||||||||||| Sbjct: 1062 caaccggccggaagtgcagagggcgctccacgccaacgtcac 1103
>dbj|AK107218.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-C12, full insert sequence Length = 1561 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 363 caaccggccggacgtgcagaaggcgctgcacgccaacgtcac 404 |||||||||||| ||||||| |||||| |||||||||||||| Sbjct: 1059 caaccggccggaagtgcagagggcgctccacgccaacgtcac 1100
>dbj|AK106111.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D11, full insert sequence Length = 1701 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 1076 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 1125
>dbj|AK104431.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-H12, full insert sequence Length = 1704 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 1079 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 1128
>dbj|AK104329.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E12, full insert sequence Length = 1700 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 1076 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 1125
>dbj|AK071869.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118K14, full insert sequence Length = 1807 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgt 401 |||| |||| |||||||| | ||||||||| ||||||||||||||||||| Sbjct: 1199 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaacgt 1248
>dbj|AK064671.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-E03, full insert sequence Length = 1744 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 363 caaccggccggacgtgcagaaggcgctgcacgccaacgtcac 404 |||||||||||| ||||||| |||||| |||||||||||||| Sbjct: 1061 caaccggccggaagtgcagagggcgctccacgccaacgtcac 1102
>emb|Y09602.1|HVCPMII H.vulgare gene encoding serine carboxypeptidase II, CP-MII Length = 6225 Score = 56.0 bits (28), Expect = 1e-04 Identities = 46/52 (88%) Strand = Plus / Plus Query: 354 ggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgtcacc 405 ||||||| |||||||| ||||||||||| ||| || ||||||||||||||| Sbjct: 3438 ggcgtactacaaccggcgggacgtgcagacggccctccacgccaacgtcacc 3489
>dbj|AK069959.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038G19, full insert sequence Length = 1720 Score = 56.0 bits (28), Expect = 1e-04 Identities = 43/48 (89%) Strand = Plus / Plus Query: 352 gaggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaac 399 |||| |||| |||||||| | ||||||||| ||||||||||||||||| Sbjct: 1080 gaggtgtacttcaaccgggctgacgtgcaggaggcgctgcacgccaac 1127
>emb|AJ890016.1| Triticum aestivum partial mRNA for serine carboxypeptidase II, (cbp2 gene), cultivar Wyuna, from endosperm tissue Length = 892 Score = 48.1 bits (24), Expect = 0.034 Identities = 45/52 (86%) Strand = Plus / Plus Query: 354 ggcgtacctcaaccggccggacgtgcagaaggcgctgcacgccaacgtcacc 405 ||||||| |||||||| ||||||||||| || || ||||||||||||||| Sbjct: 333 ggcgtactacaaccggcgggacgtgcagacagccctccacgccaacgtcacc 384
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 370 ccggacgtgcagaaggcgctgcacgcc 396 |||||||||||||||||||||| |||| Sbjct: 637817 ccggacgtgcagaaggcgctgctcgcc 637843
>gb|AY104781.1| Zea mays PCO124486 mRNA sequence Length = 1279 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 357 gtacctcaaccggccggacgtgcagaaggcgctgcacgc 395 |||||||||||| | |||||||||| |||||||||||| Sbjct: 347 gtacctcaaccgccgggacgtgcaggcggcgctgcacgc 385
>gb|AF272325.1|AF272325 Persea meridensis internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 613 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Plus Query: 291 cgtcacgccgcccatcgccccc 312 |||||||||||||||||||||| Sbjct: 359 cgtcacgccgcccatcgccccc 380
>gb|BC109114.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 15, mRNA (cDNA clone MGC:126403 IMAGE:40035454), complete cds Length = 2853 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 acccctggtcagcctgcagtg 436 ||||||||||||||||||||| Sbjct: 1202 acccctggtcagcctgcagtg 1222
>ref|NM_120909.2| Arabidopsis thaliana SCPL35; catalytic/ serine carboxypeptidase AT5G08260 (SCPL35) mRNA, complete cds Length = 1652 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tcatgattgggaacgcggtgatcaa 68 ||||||| ||||||||||||||||| Sbjct: 725 tcatgatagggaacgcggtgatcaa 749
>ref|XM_522253.1| PREDICTED: Pan troglodytes similar to a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 15 preproprotein (LOC466853), mRNA Length = 3597 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 acccctggtcagcctgcagtg 436 ||||||||||||||||||||| Sbjct: 1946 acccctggtcagcctgcagtg 1966
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 242 acatcgacatctacaacatctacgcgcccaactgcca 278 ||||||||||||||||||| ||| || ||| |||||| Sbjct: 4773181 acatcgacatctacaacatatactcgtccacctgcca 4773217
>ref|XM_848303.1| PREDICTED: Canis familiaris similar to Sodium channel protein type IV alpha subunit (Voltage-gated sodium channel alpha subunit Nav1.4) (Sodium channel protein, skeletal muscle alpha-subunit) (SkM1) (LOC610754), mRNA Length = 5514 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 208 gccgcctcggacgaggtcggcgaga 232 |||||||||||||||| |||||||| Sbjct: 2413 gccgcctcggacgaggacggcgaga 2437
>gb|AC124158.3| Macaca mulatta clone CH250-337A5, complete sequence Length = 173421 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 acccctggtcagcctgcagtg 436 ||||||||||||||||||||| Sbjct: 25998 acccctggtcagcctgcagtg 26018
>gb|AY062969.1| Arabidopsis thaliana putative serine-type carboxypeptidase II (At5g08260) mRNA, complete cds Length = 1474 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tcatgattgggaacgcggtgatcaa 68 ||||||| ||||||||||||||||| Sbjct: 656 tcatgatagggaacgcggtgatcaa 680
>gb|AF370244.1| Arabidopsis thaliana putative serine-type carboxypeptidase II (At5g08260) mRNA, complete cds Length = 1648 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tcatgattgggaacgcggtgatcaa 68 ||||||| ||||||||||||||||| Sbjct: 724 tcatgatagggaacgcggtgatcaa 748
>emb|AJ315733.1|HSA315733 Homo sapiens mRNA for metalloprotease disintegrin 15 (ADAMTS15 gene) Length = 2853 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 acccctggtcagcctgcagtg 436 ||||||||||||||||||||| Sbjct: 1202 acccctggtcagcctgcagtg 1222
>gb|AC116604.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0019D17, from chromosome 3, complete sequence Length = 129658 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 242 acatcgacatctacaacatctacgcgcccaactgcca 278 ||||||||||||||||||| ||| || ||| |||||| Sbjct: 62274 acatcgacatctacaacatatactcgtccacctgcca 62238
>ref|NM_139055.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 15 (ADAMTS15), mRNA Length = 2853 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 acccctggtcagcctgcagtg 436 ||||||||||||||||||||| Sbjct: 1202 acccctggtcagcctgcagtg 1222
>gb|DP000005.1| Macaca mulatta target 1 genomic scaffold Length = 1678549 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 acccctggtcagcctgcagtg 436 ||||||||||||||||||||| Sbjct: 162062 acccctggtcagcctgcagtg 162082
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 242 acatcgacatctacaacatctacgcgcccaactgcca 278 ||||||||||||||||||| ||| || ||| |||||| Sbjct: 4773296 acatcgacatctacaacatatactcgtccacctgcca 4773332
>emb|BX832062.1|CNS09ZTL Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH49ZD03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1548 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tcatgattgggaacgcggtgatcaa 68 ||||||| ||||||||||||||||| Sbjct: 682 tcatgatagggaacgcggtgatcaa 706
>emb|BX833307.1|CNS09YZA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZG04 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1568 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 44 tcatgattgggaacgcggtgatcaa 68 ||||||| ||||||||||||||||| Sbjct: 712 tcatgatagggaacgcggtgatcaa 736
>ref|XM_235976.2| PREDICTED: Rattus norvegicus a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 15 (predicted) (Adamts15_predicted), mRNA Length = 3678 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 acccctggtcagcctgcagtg 436 ||||||||||||||||||||| Sbjct: 2027 acccctggtcagcctgcagtg 2047
>dbj|AK105523.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-127-F12, full insert sequence Length = 2156 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 242 acatcgacatctacaacatctacgcgcccaactgcca 278 ||||||||||||||||||| ||| || ||| |||||| Sbjct: 872 acatcgacatctacaacatatactcgtccacctgcca 908
>dbj|AK064747.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-120-E08, full insert sequence Length = 1655 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 242 acatcgacatctacaacatctacgcgcccaactgcca 278 ||||||||||||||||||| ||| || ||| |||||| Sbjct: 882 acatcgacatctacaacatatactcgtccacctgcca 918
>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome Length = 3184243 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 132 gacggccgacggcatcagcaa 152 ||||||||||||||||||||| Sbjct: 1703068 gacggccgacggcatcagcaa 1703088
>dbj|AP002986.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-121M22, complete sequence Length = 157963 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 416 acccctggtcagcctgcagtg 436 ||||||||||||||||||||| Sbjct: 147339 acccctggtcagcctgcagtg 147359
>ref|XM_473236.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1521 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 gacatcgacatctacaacatctac 264 |||||||||||||||| ||||||| Sbjct: 841 gacatcgacatctacagcatctac 864
>ref|XM_369035.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00209.4) partial mRNA Length = 13452 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cgctctgcgacgccgcctcg 216 |||||||||||||||||||| Sbjct: 2597 cgctctgcgacgccgcctcg 2616
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 382 aaggcgctgcacgccaacgtcacc 405 |||||||||||||||| ||||||| Sbjct: 2517046 aaggcgctgcacgccatcgtcacc 2517069
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 cggcgccggcgtggcgtcga 193 |||||||||||||||||||| Sbjct: 3162289 cggcgccggcgtggcgtcga 3162308
>emb|BX569690.1| Synechococcus sp. WH8102 complete genome; segment 2/7 Length = 349652 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 ccgcctcgaccacccctggt 424 |||||||||||||||||||| Sbjct: 169716 ccgcctcgaccacccctggt 169697
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29 Length = 296500 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 485 tccaggagctgatgaagaac 504 |||||||||||||||||||| Sbjct: 75946 tccaggagctgatgaagaac 75965
>emb|AL663019.2|OSJN00221 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0038O10, complete sequence Length = 141545 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 gacatcgacatctacaacatctac 264 |||||||||||||||| ||||||| Sbjct: 39102 gacatcgacatctacagcatctac 39079
>emb|BX571731.5| Zebrafish DNA sequence from clone CH211-195D1 in linkage group 9, complete sequence Length = 76779 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 cgagacggccgacggcatca 148 |||||||||||||||||||| Sbjct: 54982 cgagacggccgacggcatca 55001
>gb|AY265405.1| Litsea dilleniifolia internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 621 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cgtcacgccgcccatcgccccctc 314 ||||||||| |||||||||||||| Sbjct: 348 cgtcacgccacccatcgccccctc 371
>gb|AY265403.1| Litsea glutinosa internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 621 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cgtcacgccgcccatcgccccctc 314 |||||||||||||| ||||||||| Sbjct: 342 cgtcacgccgcccaccgccccctc 365
>gb|AY265397.1| Dodecadenia grandiflora internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 598 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cgtcacgccgcccatcgccccctc 314 ||||||||| |||||||||||||| Sbjct: 320 cgtcacgccacccatcgccccctc 343
>gb|AF272277.1|AF272277 Laureae gen. sp. Hyland 14912 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 625 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cgtcacgccgcccatcgccccctc 314 ||||||||| |||||||||||||| Sbjct: 374 cgtcacgccacccatcgccccctc 397
>gb|AF272248.1|AF272248 Adenodaphne uniflora internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence Length = 632 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 291 cgtcacgccgcccatcgccccctc 314 ||||||||| |||||||||||||| Sbjct: 383 cgtcacgccacccatcgccccctc 406
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 241 gacatcgacatctacaacatctac 264 |||||||||||||||| ||||||| Sbjct: 26262525 gacatcgacatctacagcatctac 26262502
>dbj|AP006063.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0022O06 Length = 180769 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 ggacgaggtcggcgagagcc 235 |||||||||||||||||||| Sbjct: 30802 ggacgaggtcggcgagagcc 30783
>dbj|AK105830.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-E06, full insert sequence Length = 1496 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 241 gacatcgacatctacaacatctac 264 |||||||||||||||| ||||||| Sbjct: 621 gacatcgacatctacagcatctac 644
>gb|AF117582.1|AF117582 Manduca sexta clone pMsmaC22 calcyphosine-like protein mRNA, complete cds Length = 916 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 488 aggagctgatgaagaacagc 507 |||||||||||||||||||| Sbjct: 127 aggagctgatgaagaacagc 146
>gb|AF004835.1|AF004835 Brevibacillus brevis tyrocidine biosynthesis operon, tyrocidine synthetase 1 (tycA), tyrocidine synthetase 2 (tycB), tyrocidine synthetase 3 (tycC), putative ABC-transporter TycD (tycD), putative ABC-transporter TycE (tycE) and putative thioesterase GrsT homolog (tycF) genes, complete cds Length = 40897 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 agcctcgcggacatcgacat 251 |||||||||||||||||||| Sbjct: 19549 agcctcgcggacatcgacat 19568 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,598,077 Number of Sequences: 3902068 Number of extensions: 3598077 Number of successful extensions: 76941 Number of sequences better than 10.0: 67 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 76220 Number of HSP's gapped (non-prelim): 718 length of query: 611 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 588 effective length of database: 17,143,297,704 effective search space: 10080259049952 effective search space used: 10080259049952 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)