>ref|XM_470563.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 492

 Score =  127 bits (64), Expect = 5e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                       
Query: 344 gttcttgaagtgctgcctatgctgctgcaagaagatcgacggcgacatggacgtcttcgt 403
           ||||||||| ||||||   ||||||  ||||||| || ||| ||||||||| || |||||
Sbjct: 255 gttcttgaactgctgctactgctgccacaagaagctctacgccgacatggatgtgttcgt 314

                                                                       
Query: 404 gtacaagggagagcaagcgttctgcagcgccgagtgcaggtgtcagcagatggcgaggga 463
            ||||| || ||||| |||||||||||||| || ||| || | |||||||||||||||||
Sbjct: 315 ctacaaaggggagcacgcgttctgcagcgcggaatgccggagccagcagatggcgaggga 374

                                                               
Query: 464 ggagaggcgggagatcgagatcctggtcaggaagcgccgtgaagcgttccac 515
           ||||||||| ||||||||||| ||||| |||  |||||| || |||||||||
Sbjct: 375 ggagaggcgagagatcgagatgctggtgaggcggcgccgcgacgcgttccac 426



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 193 ccggcgagctcgtcgggctccagttgatcatacagccctcgccgaggc 240
           ||||||||||||||||||||| | ||||||||||||  ||||||||||
Sbjct: 89  ccggcgagctcgtcgggctccggctgatcatacagcagtcgccgaggc 136

>dbj|AK063042.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-110-D07, full
           insert sequence
          Length = 904

 Score =  127 bits (64), Expect = 5e-26
 Identities = 145/172 (84%)
 Strand = Plus / Plus

                                                                       
Query: 344 gttcttgaagtgctgcctatgctgctgcaagaagatcgacggcgacatggacgtcttcgt 403
           ||||||||| ||||||   ||||||  ||||||| || ||| ||||||||| || |||||
Sbjct: 376 gttcttgaactgctgctactgctgccacaagaagctctacgccgacatggatgtgttcgt 435

                                                                       
Query: 404 gtacaagggagagcaagcgttctgcagcgccgagtgcaggtgtcagcagatggcgaggga 463
            ||||| || ||||| |||||||||||||| || ||| || | |||||||||||||||||
Sbjct: 436 ctacaaaggggagcacgcgttctgcagcgcggaatgccggagccagcagatggcgaggga 495

                                                               
Query: 464 ggagaggcgggagatcgagatcctggtcaggaagcgccgtgaagcgttccac 515
           ||||||||| ||||||||||| ||||| |||  |||||| || |||||||||
Sbjct: 496 ggagaggcgagagatcgagatgctggtgaggcggcgccgcgacgcgttccac 547



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 193 ccggcgagctcgtcgggctccagttgatcatacagccctcgccgaggc 240
           ||||||||||||||||||||| | ||||||||||||  ||||||||||
Sbjct: 210 ccggcgagctcgtcgggctccggctgatcatacagcagtcgccgaggc 257

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Minus

                                                                           
Query: 414     gagcaagcgttctgcagcgccgagtgcaggtgtcagcagatggcgagggaggagaggcgg 473
               ||||| |||||||||||||| || ||| || | |||||||||||||||||||||||||| 
Sbjct: 4361798 gagcacgcgttctgcagcgcggaatgccggagccagcagatggcgagggaggagaggcga 4361739

                                                         
Query: 474     gagatcgagatcctggtcaggaagcgccgtgaagcgttccac 515
               ||||||||||| ||||| |||  |||||| || |||||||||
Sbjct: 4361738 gagatcgagatgctggtgaggcggcgccgcgacgcgttccac 4361697



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                               
Query: 193     ccggcgagctcgtcgggctccagttgatcatacagccctcgccgaggc 240
               ||||||||||||||||||||| | ||||||||||||  ||||||||||
Sbjct: 4362199 ccggcgagctcgtcgggctccggctgatcatacagcagtcgccgaggc 4362152

>gb|AC079633.9|AC079633 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0032G08, from Chromosome 3, complete sequence
          Length = 122052

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Plus

                                                                         
Query: 414   gagcaagcgttctgcagcgccgagtgcaggtgtcagcagatggcgagggaggagaggcgg 473
             ||||| |||||||||||||| || ||| || | |||||||||||||||||||||||||| 
Sbjct: 64699 gagcacgcgttctgcagcgcggaatgccggagccagcagatggcgagggaggagaggcga 64758

                                                       
Query: 474   gagatcgagatcctggtcaggaagcgccgtgaagcgttccac 515
             ||||||||||| ||||| |||  |||||| || |||||||||
Sbjct: 64759 gagatcgagatgctggtgaggcggcgccgcgacgcgttccac 64800



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                             
Query: 193   ccggcgagctcgtcgggctccagttgatcatacagccctcgccgaggc 240
             ||||||||||||||||||||| | ||||||||||||  ||||||||||
Sbjct: 64298 ccggcgagctcgtcgggctccggctgatcatacagcagtcgccgaggc 64345

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 89/102 (87%)
 Strand = Plus / Minus

                                                                           
Query: 414     gagcaagcgttctgcagcgccgagtgcaggtgtcagcagatggcgagggaggagaggcgg 473
               ||||| |||||||||||||| || ||| || | |||||||||||||||||||||||||| 
Sbjct: 4361913 gagcacgcgttctgcagcgcggaatgccggagccagcagatggcgagggaggagaggcga 4361854

                                                         
Query: 474     gagatcgagatcctggtcaggaagcgccgtgaagcgttccac 515
               ||||||||||| ||||| |||  |||||| || |||||||||
Sbjct: 4361853 gagatcgagatgctggtgaggcggcgccgcgacgcgttccac 4361812



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                               
Query: 193     ccggcgagctcgtcgggctccagttgatcatacagccctcgccgaggc 240
               ||||||||||||||||||||| | ||||||||||||  ||||||||||
Sbjct: 4362314 ccggcgagctcgtcgggctccggctgatcatacagcagtcgccgaggc 4362267

>ref|XM_464320.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1237

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 403 tgtacaagggagagcaagcgttctgcagcgccgagtgcaggtgtcagcagatg 455
           |||||| ||| ||| |||| ||||||||| ||||||||||||| || ||||||
Sbjct: 748 tgtacaggggggagaaagccttctgcagctccgagtgcaggtgccaccagatg 800

>dbj|AK072843.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143O11, full
           insert sequence
          Length = 1237

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Plus

                                                                
Query: 403 tgtacaagggagagcaagcgttctgcagcgccgagtgcaggtgtcagcagatg 455
           |||||| ||| ||| |||| ||||||||| ||||||||||||| || ||||||
Sbjct: 748 tgtacaggggggagaaagccttctgcagctccgagtgcaggtgccaccagatg 800

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                     
Query: 418     aagcgttctgcagcgccgagtgcaggtgtcagcagatg 455
               |||| ||||||||| ||||||||||||| || ||||||
Sbjct: 4097495 aagccttctgcagctccgagtgcaggtgccaccagatg 4097532

>dbj|AP003992.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1077_E05
          Length = 116305

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                  
Query: 418  aagcgttctgcagcgccgagtgcaggtgtcagcagatg 455
            |||| ||||||||| ||||||||||||| || ||||||
Sbjct: 7509 aagccttctgcagctccgagtgcaggtgccaccagatg 7546

>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0073A21
          Length = 170051

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                    
Query: 418    aagcgttctgcagcgccgagtgcaggtgtcagcagatg 455
              |||| ||||||||| ||||||||||||| || ||||||
Sbjct: 144161 aagccttctgcagctccgagtgcaggtgccaccagatg 144198

>emb|AL050308.9|HSG164F24 Human DNA sequence from clone GS1-164F24 on chromosome Xq26.3-27.3
              Contains a NADH dehydrogenase (ubiquinone) 1 beta
              subcomplex, 3 (12kD, B12) (NDUFB3) pseudogene and part of a
              novel gene, complete sequence
          Length = 213084

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 21     ctctgcaattgacgcttactttttc 45
              ||||| |||||||||||||||||||
Sbjct: 131069 ctctgaaattgacgcttactttttc 131093

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 422      gttctgcagcgccgagtgcaggtgtcagcagat 454
                |||||||||||  ||||||||||| ||||||||
Sbjct: 15872975 gttctgcagcgaggagtgcaggtggcagcagat 15873007

>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1081_G10
          Length = 107955

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 422   gttctgcagcgccgagtgcaggtgtcagcagat 454
             |||||||||||  ||||||||||| ||||||||
Sbjct: 36101 gttctgcagcgaggagtgcaggtggcagcagat 36133

>dbj|AK104973.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-122-B03, full
           insert sequence
          Length = 994

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 422 gttctgcagcgccgagtgcaggtgtcagcagat 454
           |||||||||||  ||||||||||| ||||||||
Sbjct: 477 gttctgcagcgaggagtgcaggtggcagcagat 509

>dbj|AK072558.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131I21, full
           insert sequence
          Length = 916

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 422 gttctgcagcgccgagtgcaggtgtcagcagat 454
           |||||||||||  ||||||||||| ||||||||
Sbjct: 490 gttctgcagcgaggagtgcaggtggcagcagat 522

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 425     ctgcagcgccgagtgcaggt 444
               ||||||||||||||||||||
Sbjct: 1072339 ctgcagcgccgagtgcaggt 1072320

>ref|XM_414024.1| PREDICTED: Gallus gallus similar to Serine/threonine-protein kinase
            H1 (PSK-H1) (LOC415658), mRNA
          Length = 1865

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 479  cgagatcctggtcaggaagc 498
            ||||||||||||||||||||
Sbjct: 992  cgagatcctggtcaggaagc 1011

>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 467     gaggcgggagatcgagatcc 486
               ||||||||||||||||||||
Sbjct: 1204941 gaggcgggagatcgagatcc 1204922

>gb|DQ005447.1| Acanthamoeba castellanii mitochondrial helicase twinkle gene,
            complete cds; nuclear gene for mitochondrial product
          Length = 3808

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 191  cgccggcgagctcgtcgggc 210
            ||||||||||||||||||||
Sbjct: 2271 cgccggcgagctcgtcgggc 2252

>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 307    aggagagcagcggcgggcgg 326
              ||||||||||||||||||||
Sbjct: 240118 aggagagcagcggcgggcgg 240137

>emb|BX935768.2| Gallus gallus finished cDNA, clone ChEST916a14
          Length = 1863

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 479  cgagatcctggtcaggaagc 498
            ||||||||||||||||||||
Sbjct: 992  cgagatcctggtcaggaagc 1011

>gb|AE004869.1| Pseudomonas aeruginosa PAO1, section 430 of 529 of the complete
            genome
          Length = 13323

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  aagtgctgcctatgctgctg 370
            ||||||||||||||||||||
Sbjct: 6675 aagtgctgcctatgctgctg 6694

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 518    cccgccgtgcagcgcccggc 537
              ||||||||||||||||||||
Sbjct: 165832 cccgccgtgcagcgcccggc 165813

>gb|L76605.1|PSEPILVA Pseudomonas aeruginosa (clone pRIC448) pilV, pilW, pilX, pilY1,
            pilY2, and pilE genes, complete cds
          Length = 6729

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 351  aagtgctgcctatgctgctg 370
            ||||||||||||||||||||
Sbjct: 5507 aagtgctgcctatgctgctg 5526


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,425,617
Number of Sequences: 3902068
Number of extensions: 4425617
Number of successful extensions: 85500
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84972
Number of HSP's gapped (non-prelim): 528
length of query: 625
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 602
effective length of database: 17,143,297,704
effective search space: 10320265217808
effective search space used: 10320265217808
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)