ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7p03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK067717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 500 e-138
2dbj|AK059975.1| Oryza sativa (japonica cultivar-group) cDNA clon... 500 e-138
3dbj|AK059880.1| Oryza sativa (japonica cultivar-group) cDNA clon... 500 e-138
4dbj|AK105788.1| Oryza sativa (japonica cultivar-group) cDNA clon... 490 e-135
5ref|NM_190005.1| Oryza sativa (japonica cultivar-group), predic... 222 1e-54
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 222 1e-54
7dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic D... 222 1e-54
8dbj|AK060605.1| Oryza sativa (japonica cultivar-group) cDNA clon... 125 2e-25
9gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome... 78 4e-11
10gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome... 78 4e-11
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
12gb|AC134453.4| Mus musculus BAC clone RP24-263P23 from chromosom... 42 2.1
13gb|AC130203.4| Mus musculus BAC clone RP24-413E20 from chromosom... 42 2.1
14gb|CP000133.1| Rhizobium etli CFN 42, complete genome 42 2.1
15gb|AC009753.5|AC009753 Homo sapiens chromosome 15 clone RP11-416... 42 2.1
16emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 42 2.1
17emb|BX088535.6| Zebrafish DNA sequence from clone DKEY-18F5 in l... 42 2.1
18gb|AC113480.8| Mus musculus chromosome 13, clone RP23-309D8, com... 42 2.1
19ref|XM_515113.1| PREDICTED: Pan troglodytes similar to FLJ00017 ... 40 8.4
20gb|AC144625.3| Mus musculus BAC clone RP24-196P19 from chromosom... 40 8.4
21gb|AC125043.4| Mus musculus BAC clone RP23-342M4 from chromosome... 40 8.4
22ref|XM_533548.2| PREDICTED: Canis familiaris similar to nuclear ... 40 8.4
23emb|Z94160.1|HS63G5 Human DNA sequence from clone RP1-63G5 on ch... 40 8.4
24gb|CP000316.1| Polaromonas sp. JS666, complete genome 40 8.4
25gb|CP000088.1| Thermobifida fusca YX, complete genome 40 8.4
26emb|AL807395.8| Mouse DNA sequence from clone RP23-81P12 on chro... 40 8.4
27gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 8.4
28gb|AF454964.1| Rattus norvegicus prostaglandin E2 receptor type ... 40 8.4
29gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hilde... 40 8.4
30ref|XM_312919.2| Anopheles gambiae str. PEST ENSANGP00000014717 ... 40 8.4
31gb|BC091192.1| Rattus norvegicus NADH dehydrogenase (ubiquinone)... 40 8.4
32gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta... 40 8.4

>dbj|AK067717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013117F22, full
           insert sequence
          Length = 1092

 Score =  500 bits (252), Expect = e-138
 Identities = 426/484 (88%)
 Strand = Plus / Plus

                                                                       
Query: 132 gcagcggcagggcggtggcagtgagggctgggcccgggccgctgacggagatcgagccgg 191
           |||| ||| |||||||||  | |||||| ||||||||||| ||||||||||||||||| |
Sbjct: 202 gcagaggccgggcggtggtggcgagggcggggcccgggccactgacggagatcgagcccg 261

                                                                       
Query: 192 acctgcaggaggaccccatcgacaagtggcgcaccaacggcgtcagcccggaggactttg 251
           ||||| | ||||||||||| || ||||||||||||||||||||||||||||| ||||| |
Sbjct: 262 acctgaacgaggaccccattgataagtggcgcaccaacggcgtcagcccggacgacttcg 321

                                                                       
Query: 252 tgtatggagtgtatgacggccaccacacctatgatgaaggccaagaaaagaagggcttct 311
            ||||||||||||||| || |||||||| ||| |||||  |||||| ||||||||||| |
Sbjct: 322 agtatggagtgtatgatggtcaccacacatataatgaaacccaagataagaagggctttt 381

                                                                       
Query: 312 gggaggatgtctccgagtggtaccaagaagctgagcctcctcagggtttccaagcgctca 371
           ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct: 382 gggaggatgtctctgagtggtaccaagaagctgaacctcctcagggcttccaagcactga 441

                                                                       
Query: 372 tctcctggtcatttccccccgcggtcatcctcggcatggctttcgatgtgccgggggagt 431
           |||||||||  ||||| || ||  ||||||| |||||||| ||| |||| ||||||||||
Sbjct: 442 tctcctggttgtttcctcctgcaatcatccttggcatggccttcaatgttccgggggagt 501

                                                                       
Query: 432 acctttacattggggcggctatcttcatcgtcgtgttctgcatcatcgagatggacaagc 491
           |||| ||||| || || ||  | ||| |||||||||||||| | |||||||||||||| |
Sbjct: 502 acctctacatcggcgcagcagtgttcgtcgtcgtgttctgcgttatcgagatggacaaac 561

                                                                       
Query: 492 cggacaaaccgcacaactttgagccggagatctacatgatggagaggtccaagcgcgaca 551
           ||||||| || ||||||||||||||||||||||||||||||||||| ||    |||||||
Sbjct: 562 cggacaagccacacaactttgagccggagatctacatgatggagagatcggctcgcgaca 621

                                                                       
Query: 552 agctcatcgcggactacaactccatggacatctgggacttcaacgagaagtacggcgagc 611
           |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 622 agctcatcgccgactacaacaccatggacatctgggacttcaacgagaagtacggcgagc 681

               
Query: 612 tctg 615
           ||||
Sbjct: 682 tctg 685



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 2  agcagcttggcgtccgccatttctgc 27
          |||||||||| |||||||||||||||
Sbjct: 45 agcagcttggtgtccgccatttctgc 70



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>dbj|AK059975.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-A09, full
           insert sequence
          Length = 1077

 Score =  500 bits (252), Expect = e-138
 Identities = 426/484 (88%)
 Strand = Plus / Plus

                                                                       
Query: 132 gcagcggcagggcggtggcagtgagggctgggcccgggccgctgacggagatcgagccgg 191
           |||| ||| |||||||||  | |||||| ||||||||||| ||||||||||||||||| |
Sbjct: 209 gcagaggccgggcggtggtggcgagggcggggcccgggccactgacggagatcgagcccg 268

                                                                       
Query: 192 acctgcaggaggaccccatcgacaagtggcgcaccaacggcgtcagcccggaggactttg 251
           ||||| | ||||||||||| || ||||||||||||||||||||||||||||| ||||| |
Sbjct: 269 acctgaacgaggaccccattgataagtggcgcaccaacggcgtcagcccggacgacttcg 328

                                                                       
Query: 252 tgtatggagtgtatgacggccaccacacctatgatgaaggccaagaaaagaagggcttct 311
            ||||||||||||||| || |||||||| ||| |||||  |||||| ||||||||||| |
Sbjct: 329 agtatggagtgtatgatggtcaccacacatataatgaaacccaagataagaagggctttt 388

                                                                       
Query: 312 gggaggatgtctccgagtggtaccaagaagctgagcctcctcagggtttccaagcgctca 371
           ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct: 389 gggaggatgtctctgagtggtaccaagaagctgaacctcctcagggcttccaagcactga 448

                                                                       
Query: 372 tctcctggtcatttccccccgcggtcatcctcggcatggctttcgatgtgccgggggagt 431
           |||||||||  ||||| || ||  ||||||| |||||||| ||| |||| ||||||||||
Sbjct: 449 tctcctggttgtttcctcctgcaatcatccttggcatggccttcaatgttccgggggagt 508

                                                                       
Query: 432 acctttacattggggcggctatcttcatcgtcgtgttctgcatcatcgagatggacaagc 491
           |||| ||||| || || ||  | ||| |||||||||||||| | |||||||||||||| |
Sbjct: 509 acctctacatcggcgcagcagtgttcgtcgtcgtgttctgcgttatcgagatggacaaac 568

                                                                       
Query: 492 cggacaaaccgcacaactttgagccggagatctacatgatggagaggtccaagcgcgaca 551
           ||||||| || ||||||||||||||||||||||||||||||||||| ||    |||||||
Sbjct: 569 cggacaagccacacaactttgagccggagatctacatgatggagagatcggctcgcgaca 628

                                                                       
Query: 552 agctcatcgcggactacaactccatggacatctgggacttcaacgagaagtacggcgagc 611
           |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agctcatcgccgactacaacaccatggacatctgggacttcaacgagaagtacggcgagc 688

               
Query: 612 tctg 615
           ||||
Sbjct: 689 tctg 692



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 2  agcagcttggcgtccgccatttctgc 27
          |||||||||| |||||||||||||||
Sbjct: 52 agcagcttggtgtccgccatttctgc 77



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>dbj|AK059880.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-H04, full
           insert sequence
          Length = 876

 Score =  500 bits (252), Expect = e-138
 Identities = 426/484 (88%)
 Strand = Plus / Plus

                                                                       
Query: 132 gcagcggcagggcggtggcagtgagggctgggcccgggccgctgacggagatcgagccgg 191
           |||| ||| |||||||||  | |||||| ||||||||||| ||||||||||||||||| |
Sbjct: 209 gcagaggccgggcggtggtggcgagggcggggcccgggccactgacggagatcgagcccg 268

                                                                       
Query: 192 acctgcaggaggaccccatcgacaagtggcgcaccaacggcgtcagcccggaggactttg 251
           ||||| | ||||||||||| || ||||||||||||||||||||||||||||| ||||| |
Sbjct: 269 acctgaacgaggaccccattgataagtggcgcaccaacggcgtcagcccggacgacttcg 328

                                                                       
Query: 252 tgtatggagtgtatgacggccaccacacctatgatgaaggccaagaaaagaagggcttct 311
            ||||||||||||||| || |||||||| ||| |||||  |||||| ||||||||||| |
Sbjct: 329 agtatggagtgtatgatggtcaccacacatataatgaaacccaagataagaagggctttt 388

                                                                       
Query: 312 gggaggatgtctccgagtggtaccaagaagctgagcctcctcagggtttccaagcgctca 371
           ||||||||||||| |||||||||||||||||||| ||||||||||| |||||||| || |
Sbjct: 389 gggaggatgtctctgagtggtaccaagaagctgaacctcctcagggcttccaagcactga 448

                                                                       
Query: 372 tctcctggtcatttccccccgcggtcatcctcggcatggctttcgatgtgccgggggagt 431
           |||||||||  ||||| || ||  ||||||| |||||||| ||| |||| ||||||||||
Sbjct: 449 tctcctggttgtttcctcctgcaatcatccttggcatggccttcaatgttccgggggagt 508

                                                                       
Query: 432 acctttacattggggcggctatcttcatcgtcgtgttctgcatcatcgagatggacaagc 491
           |||| ||||| || || ||  | ||| |||||||||||||| | |||||||||||||| |
Sbjct: 509 acctctacatcggcgcagcagtgttcgtcgtcgtgttctgcgttatcgagatggacaaac 568

                                                                       
Query: 492 cggacaaaccgcacaactttgagccggagatctacatgatggagaggtccaagcgcgaca 551
           ||||||| || ||||||||||||||||||||||||||||||||||| ||    |||||||
Sbjct: 569 cggacaagccacacaactttgagccggagatctacatgatggagagatcggctcgcgaca 628

                                                                       
Query: 552 agctcatcgcggactacaactccatggacatctgggacttcaacgagaagtacggcgagc 611
           |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 629 agctcatcgccgactacaacaccatggacatctgggacttcaacgagaagtacggcgagc 688

               
Query: 612 tctg 615
           ||||
Sbjct: 689 tctg 692



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 2  agcagcttggcgtccgccatttctgc 27
          |||||||||| |||||||||||||||
Sbjct: 52 agcagcttggtgtccgccatttctgc 77



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>dbj|AK105788.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-H02, full
           insert sequence
          Length = 967

 Score =  490 bits (247), Expect = e-135
 Identities = 403/455 (88%)
 Strand = Plus / Plus

                                                                       
Query: 161 gggcccgggccgctgacggagatcgagccggacctgcaggaggaccccatcgacaagtgg 220
           ||||||||||| ||||||||||||||||| |||||| | ||||||||||| || ||||||
Sbjct: 147 gggcccgggccactgacggagatcgagcccgacctgaacgaggaccccattgataagtgg 206

                                                                       
Query: 221 cgcaccaacggcgtcagcccggaggactttgtgtatggagtgtatgacggccaccacacc 280
           ||||||||||||||||||||||| ||||| | ||||||||||||||| || |||||||| 
Sbjct: 207 cgcaccaacggcgtcagcccggacgacttcgagtatggagtgtatgatggtcaccacaca 266

                                                                       
Query: 281 tatgatgaaggccaagaaaagaagggcttctgggaggatgtctccgagtggtaccaagaa 340
           ||| |||||  |||||| ||||||||||| |||||||||||||| |||||||||||||||
Sbjct: 267 tataatgaaacccaagataagaagggcttttgggaggatgtctctgagtggtaccaagaa 326

                                                                       
Query: 341 gctgagcctcctcagggtttccaagcgctcatctcctggtcatttccccccgcggtcatc 400
           ||||| ||||||||||| |||||||| || ||||||||||  ||||| || ||  |||||
Sbjct: 327 gctgaacctcctcagggcttccaagcactgatctcctggttgtttcctcctgcaatcatc 386

                                                                       
Query: 401 ctcggcatggctttcgatgtgccgggggagtacctttacattggggcggctatcttcatc 460
           || |||||||| ||| |||| |||||||||||||| ||||| || || ||  | ||| ||
Sbjct: 387 cttggcatggccttcaatgttccgggggagtacctctacatcggcgcagcagtgttcgtc 446

                                                                       
Query: 461 gtcgtgttctgcatcatcgagatggacaagccggacaaaccgcacaactttgagccggag 520
           |||||||||||| | |||||||||||||| |||||||| || ||||||||||||||||||
Sbjct: 447 gtcgtgttctgcgttatcgagatggacaaaccggacaagccacacaactttgagccggag 506

                                                                       
Query: 521 atctacatgatggagaggtccaagcgcgacaagctcatcgcggactacaactccatggac 580
           ||||||||||||||||| ||    ||||||||||||||||| ||||||||| ||||||||
Sbjct: 507 atctacatgatggagagatcggctcgcgacaagctcatcgccgactacaacaccatggac 566

                                              
Query: 581 atctgggacttcaacgagaagtacggcgagctctg 615
           |||||||||||||||||||||||||||||||||||
Sbjct: 567 atctgggacttcaacgagaagtacggcgagctctg 601



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                    
Query: 2  agcagcttggcgtccgccatttctgc 27
          |||||||||| |||||||||||||||
Sbjct: 52 agcagcttggtgtccgccatttctgc 77



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>ref|NM_190005.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2136

 Score =  222 bits (112), Expect = 1e-54
 Identities = 172/192 (89%)
 Strand = Plus / Plus

                                                                        
Query: 424  gggggagtacctttacattggggcggctatcttcatcgtcgtgttctgcatcatcgagat 483
            |||||||||||| ||||| || || ||  | ||| |||||||||||||| | ||||||||
Sbjct: 1899 gggggagtacctctacatcggcgcagcagtgttcgtcgtcgtgttctgcgttatcgagat 1958

                                                                        
Query: 484  ggacaagccggacaaaccgcacaactttgagccggagatctacatgatggagaggtccaa 543
            |||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||   
Sbjct: 1959 ggacaaaccggacaagccacacaactttgagccggagatctacatgatggagagatcggc 2018

                                                                        
Query: 544  gcgcgacaagctcatcgcggactacaactccatggacatctgggacttcaacgagaagta 603
             ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 2019 tcgcgacaagctcatcgccgactacaacaccatggacatctgggacttcaacgagaagta 2078

                        
Query: 604  cggcgagctctg 615
            ||||||||||||
Sbjct: 2079 cggcgagctctg 2090



 Score =  123 bits (62), Expect = 7e-25
 Identities = 98/110 (89%)
 Strand = Plus / Plus

                                                                        
Query: 132  gcagcggcagggcggtggcagtgagggctgggcccgggccgctgacggagatcgagccgg 191
            |||| ||| |||||||||  | |||||| ||||||||||| ||||||||||||||||| |
Sbjct: 1721 gcagaggccgggcggtggtggcgagggcggggcccgggccactgacggagatcgagcccg 1780

                                                              
Query: 192  acctgcaggaggaccccatcgacaagtggcgcaccaacggcgtcagcccg 241
            ||||| | ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1781 acctgaacgaggaccccattgataagtggcgcaccaacggcgtcagcccg 1830



 Score =  101 bits (51), Expect = 3e-18
 Identities = 63/67 (94%)
 Strand = Plus / Plus

                                                                        
Query: 299  aagaagggcttctgggaggatgtctccgagtggtaccaagaagctgagcctcctcagggt 358
            ||||||||||| |||||||||||||| |||||||||||||||||||| ||||||||||| 
Sbjct: 1833 aagaagggcttttgggaggatgtctctgagtggtaccaagaagctgaacctcctcagggc 1892

                   
Query: 359  ttccaag 365
            |||||||
Sbjct: 1893 ttccaag 1899



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 2    agcagcttggcgtccgccatttctgc 27
            |||||||||| |||||||||||||||
Sbjct: 1564 agcagcttggtgtccgccatttctgc 1589



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  222 bits (112), Expect = 1e-54
 Identities = 172/192 (89%)
 Strand = Plus / Plus

                                                                            
Query: 424      gggggagtacctttacattggggcggctatcttcatcgtcgtgttctgcatcatcgagat 483
                |||||||||||| ||||| || || ||  | ||| |||||||||||||| | ||||||||
Sbjct: 40778525 gggggagtacctctacatcggcgcagcagtgttcgtcgtcgtgttctgcgttatcgagat 40778584

                                                                            
Query: 484      ggacaagccggacaaaccgcacaactttgagccggagatctacatgatggagaggtccaa 543
                |||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||   
Sbjct: 40778585 ggacaaaccggacaagccacacaactttgagccggagatctacatgatggagagatcggc 40778644

                                                                            
Query: 544      gcgcgacaagctcatcgcggactacaactccatggacatctgggacttcaacgagaagta 603
                 ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 40778645 tcgcgacaagctcatcgccgactacaacaccatggacatctgggacttcaacgagaagta 40778704

                            
Query: 604      cggcgagctctg 615
                ||||||||||||
Sbjct: 40778705 cggcgagctctg 40778716



 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                            
Query: 132      gcagcggcagggcggtggcagtgagggctgggcccgggccgctgacggagatcgagccgg 191
                |||| ||| |||||||||  | |||||| ||||||||||| ||||||||||||||||| |
Sbjct: 40777696 gcagaggccgggcggtggtggcgagggcggggcccgggccactgacggagatcgagcccg 40777755

                                                                   
Query: 192      acctgcaggaggaccccatcgacaagtggcgcaccaacggcgtcagcccgg 242
                ||||| | ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 40777756 acctgaacgaggaccccattgataagtggcgcaccaacggcgtcagcccgg 40777806



 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                            
Query: 294      aagaaaagaagggcttctgggaggatgtctccgagtggtaccaagaagctgagcctcctc 353
                |||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 40778151 aagataagaagggcttttgggaggatgtctctgagtggtaccaagaagctgaacctcctc 40778210

                            
Query: 354      agggtttccaag 365
                |||| |||||||
Sbjct: 40778211 agggcttccaag 40778222



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 2        agcagcttggcgtccgccatttctgc 27
                |||||||||| |||||||||||||||
Sbjct: 40777539 agcagcttggtgtccgccatttctgc 40777564



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 253      gtatggagtgtatgacggccaccacacctatgatgaa 289
                ||||||||||||||| || |||||||| ||| |||||
Sbjct: 40777982 gtatggagtgtatgatggtcaccacacatataatgaa 40778018



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>dbj|AP004330.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0052O12
          Length = 167881

 Score =  222 bits (112), Expect = 1e-54
 Identities = 172/192 (89%)
 Strand = Plus / Plus

                                                                         
Query: 424   gggggagtacctttacattggggcggctatcttcatcgtcgtgttctgcatcatcgagat 483
             |||||||||||| ||||| || || ||  | ||| |||||||||||||| | ||||||||
Sbjct: 81171 gggggagtacctctacatcggcgcagcagtgttcgtcgtcgtgttctgcgttatcgagat 81230

                                                                         
Query: 484   ggacaagccggacaaaccgcacaactttgagccggagatctacatgatggagaggtccaa 543
             |||||| |||||||| || ||||||||||||||||||||||||||||||||||| ||   
Sbjct: 81231 ggacaaaccggacaagccacacaactttgagccggagatctacatgatggagagatcggc 81290

                                                                         
Query: 544   gcgcgacaagctcatcgcggactacaactccatggacatctgggacttcaacgagaagta 603
              ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 81291 tcgcgacaagctcatcgccgactacaacaccatggacatctgggacttcaacgagaagta 81350

                         
Query: 604   cggcgagctctg 615
             ||||||||||||
Sbjct: 81351 cggcgagctctg 81362



 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Plus

                                                                         
Query: 132   gcagcggcagggcggtggcagtgagggctgggcccgggccgctgacggagatcgagccgg 191
             |||| ||| |||||||||  | |||||| ||||||||||| ||||||||||||||||| |
Sbjct: 80342 gcagaggccgggcggtggtggcgagggcggggcccgggccactgacggagatcgagcccg 80401

                                                                
Query: 192   acctgcaggaggaccccatcgacaagtggcgcaccaacggcgtcagcccgg 242
             ||||| | ||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 80402 acctgaacgaggaccccattgataagtggcgcaccaacggcgtcagcccgg 80452



 Score =  103 bits (52), Expect = 7e-19
 Identities = 67/72 (93%)
 Strand = Plus / Plus

                                                                         
Query: 294   aagaaaagaagggcttctgggaggatgtctccgagtggtaccaagaagctgagcctcctc 353
             |||| ||||||||||| |||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 80797 aagataagaagggcttttgggaggatgtctctgagtggtaccaagaagctgaacctcctc 80856

                         
Query: 354   agggtttccaag 365
             |||| |||||||
Sbjct: 80857 agggcttccaag 80868



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 2     agcagcttggcgtccgccatttctgc 27
             |||||||||| |||||||||||||||
Sbjct: 80185 agcagcttggtgtccgccatttctgc 80210



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 253   gtatggagtgtatgacggccaccacacctatgatgaa 289
             ||||||||||||||| || |||||||| ||| |||||
Sbjct: 80628 gtatggagtgtatgatggtcaccacacatataatgaa 80664



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>dbj|AK060605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-025-B09, full
           insert sequence
          Length = 255

 Score =  125 bits (63), Expect = 2e-25
 Identities = 69/71 (97%)
 Strand = Plus / Plus

                                                                       
Query: 545 cgcgacaagctcatcgcggactacaactccatggacatctgggacttcaacgagaagtac 604
           ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1   cgcgacaagctcatcgccgactacaacaccatggacatctgggacttcaacgagaagtac 60

                      
Query: 605 ggcgagctctg 615
           |||||||||||
Sbjct: 61  ggcgagctctg 71



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>gb|AC093492.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0059G01, complete sequence
          Length = 141661

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                         
Query: 299   aagaagggcttctgggaggatgtctccgagtggtaccaagaagctgagcctcctcagggt 358
             ||||||| |||||||||||||||||| || ||||| |||||| |||| ||||||||||| 
Sbjct: 24855 aagaaggtcttctgggaggatgtctctgaatggtatcaagaaactgaacctcctcagggc 24796

                    
Query: 359   ttccaag 365
             |||||||
Sbjct: 24795 ttccaag 24789



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>gb|AC093493.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0072C16,
              complete sequence
          Length = 159525

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                          
Query: 299    aagaagggcttctgggaggatgtctccgagtggtaccaagaagctgagcctcctcagggt 358
              ||||||| |||||||||||||||||| || ||||| |||||| |||| ||||||||||| 
Sbjct: 131627 aagaaggtcttctgggaggatgtctctgaatggtatcaagaaactgaacctcctcagggc 131568

                     
Query: 359    ttccaag 365
              |||||||
Sbjct: 131567 ttccaag 131561



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 60/67 (89%)
 Strand = Plus / Minus

                                                                           
Query: 299     aagaagggcttctgggaggatgtctccgagtggtaccaagaagctgagcctcctcagggt 358
               ||||||| |||||||||||||||||| || ||||| |||||| |||| ||||||||||| 
Sbjct: 3037611 aagaaggtcttctgggaggatgtctctgaatggtatcaagaaactgaacctcctcagggc 3037552

                      
Query: 359     ttccaag 365
               |||||||
Sbjct: 3037551 ttccaag 3037545



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>gb|AC134453.4| Mus musculus BAC clone RP24-263P23 from chromosome 15, complete
             sequence
          Length = 131905

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    ctgcagcagccactgctgctc 44
             |||||||||||||||||||||
Sbjct: 18651 ctgcagcagccactgctgctc 18631



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>gb|AC130203.4| Mus musculus BAC clone RP24-413E20 from chromosome 15, complete sequence
          Length = 182040

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 24     ctgcagcagccactgctgctc 44
              |||||||||||||||||||||
Sbjct: 174949 ctgcagcagccactgctgctc 174929



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>gb|CP000133.1| Rhizobium etli CFN 42, complete genome
          Length = 4381608

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 396    tcatcctcggcatggctttcg 416
              |||||||||||||||||||||
Sbjct: 444468 tcatcctcggcatggctttcg 444488



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>gb|AC009753.5|AC009753 Homo sapiens chromosome 15 clone RP11-416K5 map 15q21.1, complete
              sequence
          Length = 158405

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 293    caagaaaagaagggcttctgg 313
              |||||||||||||||||||||
Sbjct: 116360 caagaaaagaagggcttctgg 116380



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>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete
             sequence
          Length = 100836

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 40    tgctcgtcctcgccgtggcgc 60
             |||||||||||||||||||||
Sbjct: 39324 tgctcgtcctcgccgtggcgc 39304



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>emb|BX088535.6| Zebrafish DNA sequence from clone DKEY-18F5 in linkage group 14, complete
              sequence
          Length = 197465

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 470    tgcatcatcgagatggacaag 490
              |||||||||||||||||||||
Sbjct: 187102 tgcatcatcgagatggacaag 187082



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>gb|AC113480.8| Mus musculus chromosome 13, clone RP23-309D8, complete sequence
          Length = 181457

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 126   gcagtggcagcggcagggcggtggcagtg 154
             |||||||||| ||||| ||||||||||||
Sbjct: 37393 gcagtggcagtggcagcgcggtggcagtg 37365



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>ref|XM_515113.1| PREDICTED: Pan troglodytes similar to FLJ00017 protein (LOC458809),
            mRNA
          Length = 3629

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 338  gaagctgagcctcctcaggg 357
            ||||||||||||||||||||
Sbjct: 2414 gaagctgagcctcctcaggg 2395



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>gb|AC144625.3| Mus musculus BAC clone RP24-196P19 from chromosome 5, complete sequence
          Length = 145348

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   catgatggagaggtccaagc 545
             ||||||||||||||||||||
Sbjct: 20187 catgatggagaggtccaagc 20168



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>gb|AC125043.4| Mus musculus BAC clone RP23-342M4 from chromosome 5, complete sequence
          Length = 199287

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 526    catgatggagaggtccaagc 545
              ||||||||||||||||||||
Sbjct: 189325 catgatggagaggtccaagc 189306



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>ref|XM_533548.2| PREDICTED: Canis familiaris similar to nuclear factor, interleukin
           3 regulated (LOC476347), mRNA
          Length = 1686

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 36  ctgctgctcgtcctcgccgt 55
           ||||||||||||||||||||
Sbjct: 879 ctgctgctcgtcctcgccgt 860



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>emb|Z94160.1|HS63G5 Human DNA sequence from clone RP1-63G5 on chromosome 22q12.3-13.1,
             complete sequence
          Length = 97585

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   gaagctgagcctcctcaggg 357
             ||||||||||||||||||||
Sbjct: 62363 gaagctgagcctcctcaggg 62344



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>gb|CP000316.1| Polaromonas sp. JS666, complete genome
          Length = 5200264

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 132     gcagcggcagggcggtggca 151
               ||||||||||||||||||||
Sbjct: 5116728 gcagcggcagggcggtggca 5116709



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>gb|CP000088.1| Thermobifida fusca YX, complete genome
          Length = 3642249

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 471     gcatcatcgagatggacaag 490
               ||||||||||||||||||||
Sbjct: 2473756 gcatcatcgagatggacaag 2473775



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>emb|AL807395.8| Mouse DNA sequence from clone RP23-81P12 on chromosome 11 Contains the
             5' end of the Tcn2 gene for transcobalamin 2, two novel
             genes, a glyceraldehyde-3-phosphate dehydrogenase (Gapd)
             pseudogene, the Pes1 gene for BRCT domain containing
             pescadillo homolog 1 (zebrafish), the Gcst gene for
             galactosylceramide sulfotransferase, a
             ubiquitin-conjugating enzyme E2L 3 (Ube2l3) pseuogene, the
             Sec14l4 and Sec14l2 genes for SEC14-like 4 (S. cerevisiae)
             and 2, the ortholog of human and rat SEC14-like 3 (S.
             cerevisiae) SEC14L3, a ribosomal protein L29 (Rpl29)
             pseudogene, a transformer 2 alpha homolog (Drosophila)
             (Tra2a) pseudogene and a CpG island, complete sequence
          Length = 201238

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 371   atctcctggtcatttccccc 390
             ||||||||||||||||||||
Sbjct: 38489 atctcctggtcatttccccc 38470



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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 203    gaccccatcgacaagtggcgcacc 226
              |||||||||||| |||||||||||
Sbjct: 366643 gaccccatcgaccagtggcgcacc 366666



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>gb|AF454964.1| Rattus norvegicus prostaglandin E2 receptor type 2 (Ptger-ep2) gene,
             complete cds
          Length = 15008

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 481   gatggacaagccggacaaac 500
             ||||||||||||||||||||
Sbjct: 10089 gatggacaagccggacaaac 10070



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>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete genome
          Length = 3570858

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 392     gcggtcatcctcggcatggc 411
               ||||||||||||||||||||
Sbjct: 2587425 gcggtcatcctcggcatggc 2587444



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>ref|XM_312919.2| Anopheles gambiae str. PEST ENSANGP00000014717 (ENSANGG00000012228),
            partial mRNA
          Length = 1644

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 36   ctgctgctcgtcctcgccgtggcg 59
            ||||||||||| ||||||||||||
Sbjct: 1546 ctgctgctcgtgctcgccgtggcg 1569



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>gb|BC091192.1| Rattus norvegicus NADH dehydrogenase (ubiquinone) 1 alpha
          subcomplex, 9, mRNA (cDNA clone IMAGE:7372074), partial
          cds
          Length = 1222

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 17 gccatttctgcagcagccac 36
          ||||||||||||||||||||
Sbjct: 34 gccatttctgcagcagccac 53



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>gb|AE000666.1| Methanothermobacter thermautotrophicus str. Delta H, complete genome
          Length = 1751377

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 343     tgagcctcctcagggtttcc 362
               ||||||||||||||||||||
Sbjct: 1409076 tgagcctcctcagggtttcc 1409095


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,922,232
Number of Sequences: 3902068
Number of extensions: 4922232
Number of successful extensions: 96967
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96534
Number of HSP's gapped (non-prelim): 426
length of query: 615
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 592
effective length of database: 17,143,297,704
effective search space: 10148832240768
effective search space used: 10148832240768
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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