>PAO_ARATH (Q9FYC2) Pheophorbide a oxygenase, chloroplast precursor (EC|
           1.-.-.-) (Pheide a oxygenase) (AtPaO) (Accelerated cell
           death 1) (Lethal leaf-spot 1 homolog) (Lls1)
          Length = 537

 Score = 93.2 bits (230), Expect = 5e-19
 Identities = 57/170 (33%), Positives = 90/170 (52%), Gaps = 20/170 (11%)
 Frame = +3

Query: 69  QFMLVFMC---VPVSPGKSRVIWAFPRNI------GVWLDKVIPRWYYHIGQNAILDSDI 221
           Q  ++++C   +P++PGK+R I    RN       G    +V+PRWY H   N + D D+
Sbjct: 318 QKWVIWICSFNIPMAPGKTRSIVCSARNFFQFSVPGPAWWQVVPRWYEHWTSNLVYDGDM 377

Query: 222 YLLHIEERNFAAAGVEN--------WQKAVYVPTSSDNMVIAFRNWFRKHCKSQVGW--A 371
            +L  +E+ F A  +E+        + K  + PT +D  V+AFRNW R+H KSQ  W  +
Sbjct: 378 IVLQGQEKVFLAKSMESPDYDVNKQYTKLTFTPTQADRFVLAFRNWLRRHGKSQPEWFGS 437

Query: 372 APTIGQLPETP-TKDKLMERYWSHVAQCRSCSTALKTMKALEVALQVASV 518
            P+   LP T  TK ++++R+  H   C SC  A  + + L+  L  A+V
Sbjct: 438 TPSNQPLPSTVLTKRQMLDRFDQHTQVCSSCKGAYNSFQILKKFLVGATV 487

>MYO2_CAEEL (P12845) Myosin-2 (Myosin heavy chain C) (MHC C)|
          Length = 1947

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
 Frame = +2

Query: 266  RKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRS-VTRDSNQRQAHGEVLVAR 442
            +KL E    A+      ++L+  + ++L++S +    + R+    D N+R+A GE+ +A+
Sbjct: 1020 KKLTEDLQAAEEQNLAANKLKAKLMQSLEDSEQTMEREKRNRADMDKNKRKAEGELKIAQ 1079

Query: 443  RAVQELQHGAEDHESA 490
              ++EL     D E+A
Sbjct: 1080 ETLEELNKSKSDAENA 1095

>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
 Frame = +2

Query: 134  PEEHRR-LARQGHTAVVLPHRPERYPGLRHLPPPHRGAQLRCGGRRKLAESRVRADVVGQ 310
            P  H+   A  GH+A        R  G RH       A+   GG+   ++ + R+    +
Sbjct: 1633 PRSHQEDRASHGHSA-----ESSRQSGTRH-------AETSSGGQAASSQEQARSSPGER 1680

Query: 311  HGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHG 424
            HG R Q+    +  +SG  GR  D SV  DS  R + G
Sbjct: 1681 HGSRHQQSADSS-TDSG-TGRRQDSSVVGDSGNRGSSG 1716

>RECX_DEIRA (Q9RUS2) Regulatory protein recX|
          Length = 204

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/75 (30%), Positives = 39/75 (52%)
 Frame = +2

Query: 251 RCGGRRKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEV 430
           R  G R + E+ +R  +  +  D   ELV++ L+    LG  +D  V R  N+R+  GE+
Sbjct: 62  RALGARAITEAELRGKLERRSED--PELVEEVLRRVQELGYQNDAEVARAENKRRGVGEL 119

Query: 431 LVARRAVQELQHGAE 475
            V R+ ++    GA+
Sbjct: 120 RV-RQTLRRRGLGAD 133

>TENX_HUMAN (P22105) Tenascin-X precursor (TN-X) (Hexabrachion-like protein)|
          Length = 4289

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/36 (44%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
 Frame = -3

Query: 237 RCGGGRCLS-PG*RSGRCGSTTAV*PCRARRRCSSG 133
           RC  GRC+  PG     CGS      CR R RC +G
Sbjct: 413 RCEDGRCVCWPGYTGTDCGSRACPRDCRGRGRCENG 448



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 7/47 (14%)
 Frame = -3

Query: 252 RSCAPRCG-GGRCLS------PG*RSGRCGSTTAV*PCRARRRCSSG 133
           RSC   CG GGRC+       PG     C + T    CR R RC  G
Sbjct: 340 RSCPWDCGEGGRCVDGRCVCWPGYTGEDCSTRTCPRDCRGRGRCEDG 386



 Score = 32.3 bits (72), Expect = 1.1
 Identities = 19/48 (39%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
 Frame = -3

Query: 255 QRSCAP------RCGGGRCL-SPG*RSGRCGSTTAV*PCRARRRCSSG 133
           QRSC        RC GGRC+  PG     CG  +    C  R RC +G
Sbjct: 246 QRSCPRGCSQRGRCEGGRCVCDPGYTGDDCGMRSCPRGCSQRGRCENG 293



 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
 Frame = -3

Query: 237 RCGGGRCLS-PG*RSGRCGSTTAV*PCRARRRCSSG 133
           RC  GRC+  PG     CG+      CR R RC  G
Sbjct: 475 RCESGRCMCWPGYTGRDCGTRACPGDCRGRGRCVDG 510

>TSP4_BRARE (Q8JGW0) Thrombospondin-4 precursor (Thbs4)|
          Length = 949

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/22 (59%), Positives = 16/22 (72%)
 Frame = +3

Query: 117 RVIWAFPRNIGVWLDKVIPRWY 182
           R++W  PRN+G W DKV  RWY
Sbjct: 853 RLLWKDPRNVG-WKDKVSYRWY 873

>MBN3_MOUSE (Q8R003) Muscleblind-like X-linked protein (Muscleblind-like|
           protein 3) (Cys3His CCG1-required protein) (MCHCR
           protein)
          Length = 342

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 224 PPPHRGAQLRCGGRRKLAESRVRADVVGQHGDRLQELVQKALQES 358
           PPPH  +QL   GR  L + +  A +  QH   +Q ++Q A   S
Sbjct: 72  PPPHLKSQLEVNGRNNLIQQKTAAAMFAQH---MQLMLQNAQMSS 113

>TSP3_BRARE (Q8JHW2) Thrombospondin-3 precursor (Thbs3)|
          Length = 962

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 13/53 (24%)
 Frame = +3

Query: 108  GKSRVIWAFPRNIGVWLDKVIPRW---------YYHI----GQNAILDSDIYL 227
            G+ +++W  PRN+G WLDK   RW         Y  +    G   + DSD+ +
Sbjct: 862  GEVKLLWKDPRNVG-WLDKTSYRWQLSHRPQVGYIRVKLYEGSEMVADSDVVI 913

>TSP2_HUMAN (P35442) Thrombospondin-2 precursor|
          Length = 1172

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 13/27 (48%), Positives = 17/27 (62%)
 Frame = +3

Query: 102  SPGKSRVIWAFPRNIGVWLDKVIPRWY 182
            +PG+ R +W  PRNIG W D    RW+
Sbjct: 1088 TPGQVRTLWHDPRNIG-WKDYTAYRWH 1113

>KRA92_HUMAN (Q9BYQ4) Keratin-associated protein 9-2 (Keratin-associated protein|
           9.2) (Ultrahigh sulfur keratin-associated protein 9.2)
          Length = 174

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
 Frame = -3

Query: 321 RSPCCPTTSARTRLSASFRRPPQRS---CAPRCGGGRCLSPG*RSGRCGSTTAV*PCRAR 151
           ++ CC TT  +     S  +P   S   C P C G  C         CG +++  P   R
Sbjct: 58  QNTCCRTTCCQPTCVTSCCQPSCCSTPCCQPTCCGSSCCGQTSCGSSCGQSSSCAPVYCR 117

Query: 150 RRC 142
           R C
Sbjct: 118 RTC 120

>TSP4_XENLA (Q06441) Thrombospondin-4 precursor|
          Length = 955

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 117 RVIWAFPRNIGVWLDKVIPRWY 182
           R++W  PRN+G W DKV  RW+
Sbjct: 861 RLLWKDPRNVG-WKDKVSYRWF 881

>TSP3_HUMAN (P49746) Thrombospondin-3 precursor|
          Length = 956

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 102 SPGKSRVIWAFPRNIGVWLDKVIPRW 179
           +P + R++W  PRN+G W DK   RW
Sbjct: 855 TPDQVRLLWTDPRNVG-WRDKTSYRW 879

>SEM5A_HUMAN (Q13591) Semaphorin-5A precursor (Semaphorin F) (Sema F)|
          Length = 1074

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 21/61 (34%), Positives = 26/61 (42%), Gaps = 18/61 (29%)
 Frame = -3

Query: 252 RSC---APRCGGGRCLSPG*RSGRCGST------TAV*PCRA---------RRRCSSGTP 127
           RSC   AP+CGG +C  PG     C         T+  PC           +R CS+ TP
Sbjct: 568 RSCDSPAPQCGGWQCEGPGMEIANCSRNGGWTPWTSWSPCSTTCGIGFQVRQRSCSNPTP 627

Query: 126 R 124
           R
Sbjct: 628 R 628

>VINT_FRG3V (P29164) Integrase homolog|
          Length = 275

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 16/67 (23%)
 Frame = +2

Query: 107 GEEQGDLGVPEEHRRLARQGHTAVVLPHRPER---------YPGLRH-------LPPPHR 238
           G E+  + +P+E R  + +     +LPHRP+R         Y    H       LPP  R
Sbjct: 97  GRERRSVLLPQERRGSSGRQPLYSLLPHRPKREGVIGAALCYTSASHSLSPAALLPPVGR 156

Query: 239 GAQLRCG 259
           G   RCG
Sbjct: 157 GKDRRCG 163

>SKI3_YEAST (P17883) Superkiller 3 protein|
          Length = 1432

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
 Frame = +3

Query: 117  RVIWAFPRNIGVW--LDKVIPRWYYHIGQNAILDSDIYLLHIEERN 248
            R  + FP N+ VW  LDK I R     GQN +   ++  L+ E +N
Sbjct: 1362 RSAYFFPNNLKVWERLDKNIQRRIASNGQNKVTAEEMSKLYCESKN 1407

>TSP2_CHICK (P35440) Thrombospondin-2 precursor|
          Length = 1178

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +3

Query: 102  SPGKSRVIWAFPRNIGVWLDKVIPRWY 182
            +PG+ R +W  P+NIG W D    RW+
Sbjct: 1094 TPGQVRTLWHDPKNIG-WKDYTAYRWH 1119

>CO7A1_HUMAN (Q02388) Collagen alpha-1(VII) chain precursor (Long-chain collagen)|
            (LC collagen)
          Length = 2944

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 41/166 (24%), Positives = 53/166 (31%), Gaps = 2/166 (1%)
 Frame = +2

Query: 80   GVHVRPGVSGE--EQGDLGVPEEHRRLARQGHTAVVLPHRPERYPGLRHLPPPHRGAQLR 253
            G+   PGV G   E+GD G P E  R    G +           PG     PP R     
Sbjct: 1658 GLRGAPGVRGPVGEKGDQGDPGEDGRNGSPGSSGPKGDRGEPGPPG-----PPGRLVDTG 1712

Query: 254  CGGRRKLAESRVRADVVGQHGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEVL 433
             G R K           G+ GDR QE  +    + G  G P +R +          G+  
Sbjct: 1713 PGAREK-----------GEPGDRGQEGPRGPKGDPGLPGAPGERGIEGFRGPPGPQGDPG 1761

Query: 434  VARRAVQELQHGAEDHESAXXXXXXXXXXXXXFPCGRQGDTSDVGR 571
            V   A ++   G    +                P G  G   D GR
Sbjct: 1762 VRGPAGEKGDRGPPGLDGRSGLDGKPGAAGPSGPNGAAGKAGDPGR 1807

>COMP_RAT (P35444) Cartilage oligomeric matrix protein precursor (COMP)|
          Length = 755

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 13/50 (26%)
 Frame = +3

Query: 117 RVIWAFPRNIGVWLDKVIPRWY-------------YHIGQNAILDSDIYL 227
           R++W  PRN+G W DK   RW+             ++ G   + DS++ L
Sbjct: 663 RLLWKDPRNVG-WKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVL 711

>COMP_MOUSE (Q9R0G6) Cartilage oligomeric matrix protein precursor (COMP)|
          Length = 755

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 13/50 (26%)
 Frame = +3

Query: 117 RVIWAFPRNIGVWLDKVIPRWY-------------YHIGQNAILDSDIYL 227
           R++W  PRN+G W DK   RW+             ++ G   + DS++ L
Sbjct: 663 RLLWKDPRNVG-WKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVL 711

>GLGB_SOLTU (P30924) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Starch|
           branching enzyme) (Q-enzyme)
          Length = 861

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 14/28 (50%), Positives = 17/28 (60%)
 Frame = +3

Query: 96  PVSPGKSRVIWAFPRNIGVWLDKVIPRW 179
           PV P  SRV + F    GVW+D+ IP W
Sbjct: 199 PVIPHNSRVKFRFKHGNGVWVDR-IPAW 225

>COMP_BOVIN (P35445) Cartilage oligomeric matrix protein (COMP) (Fragment)|
          Length = 439

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 13/50 (26%)
 Frame = +3

Query: 117 RVIWAFPRNIGVWLDKVIPRWY-------------YHIGQNAILDSDIYL 227
           R++W  PRN+G W DK   RW+             ++ G   + DS++ L
Sbjct: 347 RLLWKDPRNVG-WKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVIL 395

>KRA93_HUMAN (Q9BYQ3) Keratin-associated protein 9-3 (Keratin-associated protein|
           9.3) (Ultrahigh sulfur keratin-associated protein 9.3)
          Length = 159

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 21/70 (30%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
 Frame = -3

Query: 315 PCC-PTTSARTRLSASFRRP--PQRSCAPRCGGGRCLSPG*RSGRCGSTTAV*PCRARRR 145
           PCC PT    T    +  +P      C P C    C  P      CG +++  P   RR 
Sbjct: 45  PCCHPTCCQNTCCRTTCCQPICVTSCCQPSCCSTPCCQPTCCGSSCGQSSSCAPVYCRRT 104

Query: 144 CSSGTPRSPC 115
           C    P S C
Sbjct: 105 CYH--PTSVC 112

>ACDA_METTH (O27743) Acetyl-CoA decarbonylase/synthase complex alpha subunit|
           (EC 1.2.99.2) (ACDS complex alpha subunit) (ACDS complex
           carbon monoxide dehydrogenase) (ACDS CODH)
          Length = 780

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 24/83 (28%), Positives = 33/83 (39%)
 Frame = +2

Query: 299 VVGQHGDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEVLVARRAVQELQHGAED 478
           V+G HG + + L          LGR DD    +  + R   GEV+    A + L + AE+
Sbjct: 647 VLGPHGSKYRRLF---------LGRADDEEKWKLKDLRT--GEVIDGEPAPEHLLYAAEN 695

Query: 479 HESAXXXXXXXXXXXXXFPCGRQ 547
            E A              P GRQ
Sbjct: 696 REEATVMIAKLCIRPTDTPKGRQ 718

>TKT_MYCLE (P46708) Transketolase (EC 2.2.1.1) (TK)|
          Length = 699

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = -1

Query: 461 AAPALRDVRPVPLHELVFGWSLW*LTDRRGGPADLTLAVLSEPVPEG 321
           A P L  VRP   +E  + W          GP  L L   S PV EG
Sbjct: 514 AIPRLSVVRPADANETAYAWRTILARGANSGPVGLILTRQSVPVLEG 560

>GPDA_SERMA (Q8KRM1) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)|
           (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase)
          Length = 340

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 38/115 (33%), Positives = 46/115 (40%), Gaps = 13/115 (11%)
 Frame = +2

Query: 152 LARQGHTAVVLPHRPERYPGLRH-------LP--PPHRGAQLRCGGRRKLAESRVRADVV 304
           LAR GH+ V+  H P +   L+H       LP  P      L     R LA SR    VV
Sbjct: 24  LARNGHSVVLWGHNPAQIQTLQHDRCNQAFLPDVPFPDTLLLEADLARALAASRDVLVVV 83

Query: 305 GQH--GDRLQELVQKALQESGRLGRPDDRSVTRDSNQRQAHGEVL--VARRAVQE 457
             H  GD L++L            RPD R V          G +L  VAR A+ E
Sbjct: 84  PSHVFGDVLRQLKPHL--------RPDARIVWATKGLEAETGRLLQNVAREALGE 130

>PRTD_ERWCH (P23596) Proteases secretion ATP-binding protein prtD|
          Length = 575

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +2

Query: 95  PGVSGEEQGDLGVPEEHRRLARQGHTAVVLPHRPERYPGLRHLPPPHRGAQLRCG-GRRK 271
           P  S + +GD  + +    L ++G T V++ HRP      + +   H G Q R G  R  
Sbjct: 493 PNASLDSEGDQALMQAIVALQKRGATVVLITHRPALTTLAQKILILHEGQQQRMGLARDV 552

Query: 272 LAESRVRA 295
           L E + R+
Sbjct: 553 LTELQQRS 560

>PRRT1_HUMAN (Q99946) Proline-rich transmembrane protein 1|
          Length = 306

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 13/36 (36%), Positives = 17/36 (47%)
 Frame = -1

Query: 179 PPRYDLVEPDADVPRERPDHPALPRRHRDAHEHQHE 72
           PP Y+  +P A+ P   P   A P  H   H H H+
Sbjct: 17  PPPYNAPQPPAEPPAPPPQ--AAPSSHHHHHHHYHQ 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,467,609
Number of Sequences: 219361
Number of extensions: 1461101
Number of successful extensions: 5572
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 5209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5552
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)