Clone Information

BLAST Search Result

Clone Name	baal8d17
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	MYOC_DICDI (P42522) Myosin IC heavy chain	35	0.14
2	PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)	33	0.30
3	SPR1A_RAT (Q63532) Cornifin A (Small proline-rich protein 1A) (S...	33	0.30
4	CPN_DROME (Q02910) Calphotin	33	0.52
5	SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic inos...	32	0.88
6	LZTS1_MOUSE (P60853) Leucine zipper putative tumor suppressor 1 ...	31	1.5
7	V70K_EPMV (P20129) 70 kDa protein	31	1.5
8	P85B_RAT (Q63788) Phosphatidylinositol 3-kinase regulatory beta ...	31	1.5
9	LZTS1_RAT (Q8CFC9) Leucine zipper putative tumor suppressor 1 (P...	31	1.5
10	NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alph...	31	1.5
11	PLXB1_MOUSE (Q8CJH3) Plexin-B1 precursor	31	1.5
12	NUMB_MOUSE (Q9QZS3) Protein numb homolog (m-Numb) (m-Nb)	31	2.0
13	GRP2_ORYSA (P29834) Glycine-rich cell wall structural protein 2 ...	31	2.0
14	IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Prot...	30	2.6
15	ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atr...	30	2.6
16	ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atr...	30	2.6
17	ZN366_HUMAN (Q8N895) Zinc finger protein 366	30	3.3
18	WDR24_HUMAN (Q96S15) WD-repeat protein 24	30	3.3
19	PQQF_KLEPN (P27508) Coenzyme PQQ synthesis protein F (EC 3.4.99....	30	3.3
20	HUNB_DROSL (O46256) Protein hunchback (Fragments)	30	4.4
21	HUNB_DROCY (O46238) Protein hunchback (Fragments)	30	4.4
22	USPA_PASMU (Q9CLE9) Universal stress protein A homolog	29	5.7
23	PLCL4_HUMAN (O75038) 1-phosphatidylinositol-4,5-bisphosphate pho...	29	5.7
24	SPR1A_MOUSE (Q62266) Cornifin A (Small proline-rich protein 1A) ...	29	5.7
25	PLCB3_HUMAN (Q01970) 1-phosphatidylinositol-4,5-bisphosphate pho...	29	5.7
26	NHAB_RHOER (P13449) Nitrile hydratase subunit beta (EC 4.2.1.84)...	29	5.7
27	FIBA_HUMAN (P02671) Fibrinogen alpha chain precursor [Contains: ...	29	7.5
28	RAB12_MOUSE (P35283) Ras-related protein Rab-12 (Rab-13) (Fragment)	29	7.5
29	LZTS1_HUMAN (Q9Y250) Leucine zipper putative tumor suppressor 1 ...	29	7.5
30	K1C9_HUMAN (P35527) Keratin, type I cytoskeletal 9 (Cytokeratin-...	29	7.5
31	SELU_RALEJ (Q476K0) tRNA 2-selenouridine synthase (EC 2.9.1.-) (...	29	7.5
32	SMAD5_BRARE (Q9W7E7) Mothers against decapentaplegic homolog 5 (...	29	7.5
33	NADB_PYRAB (Q9V2R0) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Q...	29	7.5
34	VG13_ICHV1 (Q00166) Hypothetical gene 13 zinc-binding protein	28	9.7
35	EXO70_GIBZE (Q4ILI9) Exocyst complex protein EXO70	28	9.7
36	RAB12_CANFA (P51152) Ras-related protein Rab-12 (Fragment)	28	9.7
37	ARDH_PICST (P50167) D-arabinitol 2-dehydrogenase [ribulose formi...	28	9.7
38	PME17_CHICK (Q98917) Melanocyte protein Pmel 17 precursor (115 k...	28	9.7
39	RAB12_RAT (P35284) Ras-related protein Rab-12 (Fragment)	28	9.7
40	NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1	28	9.7
41	GLGB_HAEIN (P45177) 1,4-alpha-glucan branching enzyme (EC 2.4.1....	28	9.7
42	RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif pro...	28	9.7
43	STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)	28	9.7
44	NKX61_RAT (O35762) Homeobox protein Nkx-6.1	28	9.7
45	NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1	28	9.7
46	CYB6_CHLLT (Q59297) Cytochrome bc complex cytochrome b subunit	28	9.7
47	HUNB_DROAD (O46232) Protein hunchback (Fragments)	28	9.7

>MYOC_DICDI (P42522) Myosin IC heavy chain|
          Length = 1181

 Score = 34.7 bits (78), Expect = 0.14
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
 Frame = -3

Query: 223  PSPCQPSAVQPIL--PLGTSPGRHPIVTDQPAAVALEPLLCRAA-VPGGEDDGIEAVPLP 53
            P+P  P +  P++  P  T+PG  P++     A    P++ + A VPGG   G  A+  P
Sbjct: 999  PAPAAPPSGPPVMKKPAPTAPGGAPMMKKPAPAPGGAPMMKKPAPVPGGPAPGGSAIMKP 1058

Query: 52   AG 47
            AG
Sbjct: 1059 AG 1060

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>PLXB1_HUMAN (O43157) Plexin-B1 precursor (Semaphorin receptor SEP)|
          Length = 2135

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 23/65 (35%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
 Frame = -3

Query: 274 PADVLRDEL-PVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAA 98
           P D+L   L P   AAV P+   P A+ P +PL   P   P  T   A  +++P L    
Sbjct: 784 PEDLLASPLSPSEVAAVPPADPGPEALHPTVPLDLPPATVPATTFPGAMGSVKPALDWLT 843

Query: 97  VPGGE 83
             GGE
Sbjct: 844 REGGE 848

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>SPR1A_RAT (Q63532) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPRR1)|
          Length = 152

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 18/44 (40%), Positives = 22/44 (50%)
 Frame = -3

Query: 223 PSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVP 92
           P PCQP   +P  P    P  HP+V +    VA EP  C+  VP
Sbjct: 93  PEPCQPKVPEPCHPKAPEP-CHPVVPEPCQPVAPEP--CQPVVP 133

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>CPN_DROME (Q02910) Calphotin|
          Length = 864

 Score = 32.7 bits (73), Expect = 0.52
 Identities = 25/80 (31%), Positives = 33/80 (41%)
 Frame = -3

Query: 352 ALYPIATVVGGDGSIASVIARALKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGT 173
           A  P+  VV  +       A A   + A  + +  PV AA  D     PSA  PI+    
Sbjct: 420 AAEPVPAVVAEETPETPAPASAPVTIAALDIPEVAPVIAAPSDAPAEAPSAAAPIVSTPP 479

Query: 172 SPGRHPIVTDQPAAVALEPL 113
           +    P  T  PAAV  EP+
Sbjct: 480 TTASVPETTAPPAAVPTEPI 499



 Score = 28.9 bits (63), Expect = 7.5
 Identities = 18/70 (25%), Positives = 29/70 (41%)
 Frame = -3

Query: 343 PIATVVGGDGSIASVIARALKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPG 164
           P+A       ++  V++  +   P       +PV AA V   P     V P+L    +P 
Sbjct: 140 PVAASAPTPAAVTPVVSPVIATPPVVPANTTVPV-AAPVAAVPAAVPVVAPVLAPAVAPA 198

Query: 163 RHPIVTDQPA 134
             P+V + PA
Sbjct: 199 VAPVVAETPA 208



 Score = 28.9 bits (63), Expect = 7.5
 Identities = 21/63 (33%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
 Frame = -3

Query: 316 GSIASVIAR--ALKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTD 143
           G+I S ++   A    P+ V      V  AAV P+P  P AV P+ P  T     P    
Sbjct: 4   GTIPSPVSAPVAAPVTPSAVAAPVQVVSPAAVAPAPAAPIAVTPVAPPPTLASVQPATVT 63

Query: 142 QPA 134
            PA
Sbjct: 64  IPA 66

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>SYNJ1_BOVIN (O18964) Synaptojanin-1 (EC 3.1.3.36) (Synaptic|
            inositol-1,4,5-trisphosphate 5-phosphatase 1) (p150)
            (Fragment)
          Length = 1324

 Score = 32.0 bits (71), Expect = 0.88
 Identities = 23/73 (31%), Positives = 33/73 (45%)
 Frame = -3

Query: 274  PADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAV 95
            P+  +++ L   AA +  S  QPS   P  P   S   H + +D PAA A   +     V
Sbjct: 1241 PSQEMQEPLIAVAAPLAQSALQPSLETPPQPPPRSRSSHSLPSDAPAAAAGATI----RV 1296

Query: 94   PGGEDDGIEAVPL 56
             G +  G+ AV L
Sbjct: 1297 TGEKQTGVSAVRL 1309

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>LZTS1_MOUSE (P60853) Leucine zipper putative tumor suppressor 1 (F37/Esophageal|
           cancer-related gene-coding leucine-zipper motif) (Fez1)
          Length = 598

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 10/66 (15%)
 Frame = -3

Query: 226 DPSPCQPSAVQPILPLG----------TSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDD 77
           D    +P+A +P+LP            TS   HP+  D+P    L+P LC  A+     +
Sbjct: 117 DKGAVRPTAFKPVLPRSGAILHSSPESTSHQLHPMPPDKPKEQELKPGLCSGALSDSGRN 176

Query: 76  GIEAVP 59
            + ++P
Sbjct: 177 SMSSLP 182

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>V70K_EPMV (P20129) 70 kDa protein|
          Length = 649

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
 Frame = -3

Query: 277 LPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHP-IVTDQPAAVALEPLLCRA 101
           L  DV   E   C +   P P  P+ + P+LP GT P   P  ++  P++++L   L  A
Sbjct: 501 LATDVSNSETKNCPSPTVPPPFLPNHLHPLLP-GTDPPTTPRQLSPSPSSLSLRTFLDSA 559

Query: 100 AVPGGEDDGIEAVPLPA 50
            +       +   P P+
Sbjct: 560 VISCDSSPVLPPSPSPS 576

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>P85B_RAT (Q63788) Phosphatidylinositol 3-kinase regulatory beta subunit|
           (PI3-kinase p85-beta subunit) (PtdIns-3-kinase p85-beta)
          Length = 722

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 16/33 (48%), Positives = 16/33 (48%)
 Frame = -3

Query: 157 PIVTDQPAAVALEPLLCRAAVPGGEDDGIEAVP 59
           P       A A  PLL RA  PGGE DG E  P
Sbjct: 239 PATAVHALASAFGPLLLRAPPPGGEGDGSEPAP 271

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>LZTS1_RAT (Q8CFC9) Leucine zipper putative tumor suppressor 1 (PSD-Zip70)|
          Length = 600

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 10/66 (15%)
 Frame = -3

Query: 226 DPSPCQPSAVQPILP-----LGTSPGR-----HPIVTDQPAAVALEPLLCRAAVPGGEDD 77
           D +  +P+A +P+LP     L +SP       HP+  D+P    L+P LC  A+     +
Sbjct: 117 DKAAVRPTAFKPVLPRSGAILHSSPESTNHQLHPMPPDKPKEQELKPGLCSGALSDSGRN 176

Query: 76  GIEAVP 59
            + ++P
Sbjct: 177 SMSSLP 182

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>NACAM_MOUSE (P70670) Nascent polypeptide-associated complex alpha subunit,|
            muscle-specific form (Alpha-NAC, muscle-specific form)
          Length = 2187

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 26/74 (35%), Positives = 31/74 (41%)
 Frame = -3

Query: 280  QLPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRA 101
            +LP     DELP        S  +P   QPIL     P   P  T  PA  A +P+L   
Sbjct: 1939 KLPVPAEEDELPPLIPPEAVSGGEP--FQPILV--NMPAPKPAGTPAPAPSAKQPVLKNN 1994

Query: 100  AVPGGEDDGIEAVP 59
               G E D  E+VP
Sbjct: 1995 KGSGTESDSDESVP 2008

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>PLXB1_MOUSE (Q8CJH3) Plexin-B1 precursor|
          Length = 2119

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 274 PADVLRD-ELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAA 98
           P D+L     P  AAAV P+   P A+  ++ L   PG  P  T   A  +++P+L    
Sbjct: 782 PEDLLASYPFPSDAAAVSPAEPGPEALPSMVALDQPPGTVPDTTFPGAPGSMKPVLDWLT 841

Query: 97  VPGGE 83
             GGE
Sbjct: 842 KGGGE 846

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>NUMB_MOUSE (Q9QZS3) Protein numb homolog (m-Numb) (m-Nb)|
          Length = 653

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = -3

Query: 292 RALKQLPADVLRDELPVCAAAVDP--SPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALE 119
           R L+++   V   +  V AA + P   P  P+A+ P  P       H  +T QP  V + 
Sbjct: 444 RWLEEVSKSVRAQQPQVSAAPLQPVLQPPPPAAIAPPAPPFQG---HAFLTSQPVPVGVV 500

Query: 118 PLLCRAAVPGGEDDGIEAVPLPAGEL 41
           P L  A VP         +P PA  +
Sbjct: 501 PPLQPAFVPTQSYPVANGMPYPASNV 526

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>GRP2_ORYSA (P29834) Glycine-rich cell wall structural protein 2 precursor|
          Length = 185

 Score = 30.8 bits (68), Expect = 2.0
 Identities = 16/39 (41%), Positives = 20/39 (51%)
 Frame = +2

Query: 131 GGGLIGDDGMASGRCPKGENGLYRAGLAGRGIYGSGTDG 247
           GGG  G+ G +      G+   Y AG+ G G YGSG  G
Sbjct: 79  GGGGGGEGGGSGSGYGSGQGSGYGAGVGGAGGYGSGGGG 117

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>IE63_MCMVS (Q69154) Transcriptional regulator IE63 homolog (Protein UL69)|
          Length = 841

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 27/98 (27%), Positives = 40/98 (40%), Gaps = 8/98 (8%)
 Frame = -3

Query: 334 TVVGGDG----SIASVIARALKQLPADVLRDELPVCAAAVDPSPCQPSAV----QPILPL 179
           TV G +G    S  S  ++  +Q P    ++     A    PSPC PS      +P    
Sbjct: 577 TVHGQNGARGDSAPSRKSQQSQQQPETTSKESSKTAAMPPPPSPCSPSPASRERRPSKSP 636

Query: 178 GTSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDDGIEA 65
            +SP  H   + +PA    E      A  G ED+G+ +
Sbjct: 637 SSSPRPHDPPSGEPADAEKE-----LATAGDEDEGVRS 669

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>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1185

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 24/59 (40%), Positives = 29/59 (49%)
 Frame = +3

Query: 42  SSPAGSGTASMPSSSPPGTAARQRSGSRATAAG*SVTMGWRPGDVPRGRMGCTALGWQG 218
           SSPAG  TAS P   P G  A    G+  TA       G++PG  P  R G T  G++G
Sbjct: 618 SSPAGYKTASPPGPPPYGKRA-PSPGAYKTA----TPPGYKPGSPPSFRTG-TPPGYRG 670

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>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)|
          Length = 1186

 Score = 30.4 bits (67), Expect = 2.6
 Identities = 24/59 (40%), Positives = 29/59 (49%)
 Frame = +3

Query: 42  SSPAGSGTASMPSSSPPGTAARQRSGSRATAAG*SVTMGWRPGDVPRGRMGCTALGWQG 218
           SSPAG  TAS P   P G  A    G+  TA       G++PG  P  R G T  G++G
Sbjct: 619 SSPAGYKTASPPGPPPYGKRA-PSPGAYKTA----TPPGYKPGSPPSFRTG-TPPGYRG 671

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>ZN366_HUMAN (Q8N895) Zinc finger protein 366|
          Length = 744

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 23/73 (31%), Positives = 32/73 (43%)
 Frame = -3

Query: 265 VLRDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVPGG 86
           +++DE      AV  +P  P  +QP+   G +P RHP     P A+       R   P G
Sbjct: 7   MIKDEDVHFDLAVKKTPSFPHCLQPVASRGKAPQRHPF----PEALRGPFSQFRYEPPPG 62

Query: 85  EDDGIEAVPLPAG 47
           + DG   V   AG
Sbjct: 63  DLDGFPGVFEGAG 75

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>WDR24_HUMAN (Q96S15) WD-repeat protein 24|
          Length = 920

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 27/98 (27%), Positives = 38/98 (38%), Gaps = 11/98 (11%)
 Frame = -3

Query: 277 LPADVL-------RDELPVCAAAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALE 119
           +PAD L        DEL +    +DP    P   + +LP    P RH IV   P    L+
Sbjct: 664 VPADYLLGDVEGEEDELYL----LDPEHAHPEDPECVLPQEAFPLRHEIVDTPPGPEHLQ 719

Query: 118 PLLCRAAVPGGEDDGIEAVPLPAG----ELHHVPFDAR 17
                  V G E D     P+ +      + H  +D+R
Sbjct: 720 DKADSPHVSGSEADVASLAPVDSSFSLLSVSHALYDSR 757

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>PQQF_KLEPN (P27508) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)|
           (Pyrroloquinoline quinone biosynthesis protein F)
          Length = 761

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 7/117 (5%)
 Frame = -3

Query: 376 RRPHAFIQALY-----PIATVVGGDGSIASVIARALKQLPADVLRD--ELPVCAAAVDPS 218
           RRP A +QA+      P+A++     SIA  I   + QLP  +     +    AA    S
Sbjct: 505 RRPEAILQAILRQLALPVASLTPSPESIA--IRHLMAQLPERLGTSGHQKGWLAALAGGS 562

Query: 217 PCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDDGIEAVPLPAG 47
                 V   L L T+P   P+    P    +E    R   PGG+   +  +PLP G
Sbjct: 563 AEDAQWVARQLSLITAPVNPPMPAPAPCRRGVE----RLVYPGGDTALLVFIPLPDG 615

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>HUNB_DROSL (O46256) Protein hunchback (Fragments)|
          Length = 196

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
 Frame = -3

Query: 283 KQLPADVLRDELPVCAAAVDPS------------PCQPSAVQPILPLGTSPGRHPIVTDQ 140
           +Q P D L      CAAA+ PS            P  P+ +Q I+P    P      T  
Sbjct: 79  QQQPMDTL------CAAAMTPSSSNNDQNSPLMPPGLPNPMQSIMPANLRPSPTATTTTT 132

Query: 139 PAAVALEPLLCRAAVPGGEDDGIEAVPLP 53
           PAA A  P    A +    +D ++A+  P
Sbjct: 133 PAAAA--PTTTAATIALQANDKLQALTPP 159

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>HUNB_DROCY (O46238) Protein hunchback (Fragments)|
          Length = 198

 Score = 29.6 bits (65), Expect = 4.4
 Identities = 26/89 (29%), Positives = 36/89 (40%), Gaps = 12/89 (13%)
 Frame = -3

Query: 283 KQLPADVLRDELPVCAAAVDPSPCQ------------PSAVQPILPLGTSPGRHPIVTDQ 140
           +Q P D L      CAAA+ PSP              P+ +Q I+P    P      T  
Sbjct: 81  QQQPMDTL------CAAAMTPSPSNNDQNSPLMPPGLPNPMQSIMPANLRPCPTATTTTT 134

Query: 139 PAAVALEPLLCRAAVPGGEDDGIEAVPLP 53
           PAA A  P    A +    +D ++A+  P
Sbjct: 135 PAAAA--PTTTAATIVLQANDKLQALTPP 161

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>USPA_PASMU (Q9CLE9) Universal stress protein A homolog|
          Length = 141

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
 Frame = -3

Query: 388 RITTRRPHAFIQ----ALYPIATVVGGDGSIASVIARALKQLPADVL 260
           RI+T    + +Q    + YP+A  + G G +  V+A A+++   D+L
Sbjct: 60  RISTETQQSLVQLAENSSYPVAEKLSGSGDLGQVLADAIEKYDVDLL 106

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>PLCL4_HUMAN (O75038) 1-phosphatidylinositol-4,5-bisphosphate|
            phosphodiesterase-like 4 (EC 3.1.4.11) (Phosphoinositide
            phospholipase C-like 4) (Phospholipase C-like 4)
            (Fragment)
          Length = 1182

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +3

Query: 30   GTWWSSPAGSGTASMPSSSPPGTAARQRS 116
            G W   P GSG+ S  SSSP      +RS
Sbjct: 1113 GAWRQGPGGSGSMSSDSSSPDSPGIPERS 1141

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>SPR1A_MOUSE (Q62266) Cornifin A (Small proline-rich protein 1A) (SPR1A) (SPR1|
           A)
          Length = 144

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = -3

Query: 223 PSPCQPSAVQPILPLGTSPGRHPIVTDQ-PAAVALEP 116
           P PCQP A +P  P    P  HP+V +  P+ V   P
Sbjct: 101 PEPCQPKAPEPCHPKAPEP-CHPVVPEPCPSTVTPSP 136

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>PLCB3_HUMAN (Q01970) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase|
            beta 3 (EC 3.1.4.11) (Phosphoinositide phospholipase C)
            (Phospholipase C-beta-3) (PLC-beta-3)
          Length = 1234

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
 Frame = -3

Query: 211  QPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDDGI-----EAVPLPAG 47
            QPS+     PL  SP R P  T  PA+ +L       + PG  DD I     E  P P  
Sbjct: 903  QPSSNPTPSPLDASPRRPPGPTTSPASTSL-------SSPGQRDDLIASILSEVAPTPLD 955

Query: 46   EL 41
            EL
Sbjct: 956  EL 957

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>NHAB_RHOER (P13449) Nitrile hydratase subunit beta (EC 4.2.1.84) (Nitrilase)|
           (NHase)
          Length = 212

 Score = 29.3 bits (64), Expect = 5.7
 Identities = 14/45 (31%), Positives = 20/45 (44%)
 Frame = +2

Query: 152 DGMASGRCPKGENGLYRAGLAGRGIYGSGTDGEFIAEDISRQLLQ 286
           D +  GR   GE   Y    A   ++GS TDG  +  D+    L+
Sbjct: 165 DAIGHGRNDAGEEPTYHVKFAAEELFGSDTDGGSVVVDLFEGYLE 209

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>FIBA_HUMAN (P02671) Fibrinogen alpha chain precursor [Contains: Fibrinopeptide|
           A]
          Length = 866

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 13/63 (20%)
 Frame = +3

Query: 45  SPAGSGTASM----PSSSPPGTAARQRSGSRATAAG*SVTMG---------WRPGDVPRG 185
           +P  SGT       P SS PG+     SGS  T +  +   G         W PG   RG
Sbjct: 309 NPGSSGTGGTATWKPGSSGPGSTGSWNSGSSGTGSTGNQNPGSPRPGSTGTWNPGSSERG 368

Query: 186 RMG 194
             G
Sbjct: 369 SAG 371

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>RAB12_MOUSE (P35283) Ras-related protein Rab-12 (Rab-13) (Fragment)|
          Length = 191

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = -3

Query: 286 LKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILP 182
           LK++P DVLR+EL     ++ P P  P  + P  P
Sbjct: 152 LKKMPLDVLRNELSNSILSLQPEPEIPPELPPPRP 186

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>LZTS1_HUMAN (Q9Y250) Leucine zipper putative tumor suppressor 1 (F37/esophageal|
           cancer-related gene-coding leucine-zipper motif) (Fez1)
          Length = 595

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
 Frame = -3

Query: 211 QPSAVQPILP-----LGTSPGR-----HPIVTDQPAAVALEPLLCRAAVPGGEDDGIEAV 62
           +P+A +P+LP     L +SP       HP   D+P    L+P LC  A+     + + ++
Sbjct: 122 RPTAFKPVLPRSGAILHSSPESASHQLHPAPPDKPKEQELKPGLCSGALSDSGRNSMSSL 181

Query: 61  P 59
           P
Sbjct: 182 P 182

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>K1C9_HUMAN (P35527) Keratin, type I cytoskeletal 9 (Cytokeratin-9) (CK-9)|
           (Keratin-9) (K9)
          Length = 623

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 19/71 (26%), Positives = 27/71 (38%), Gaps = 3/71 (4%)
 Frame = +2

Query: 44  FAGGERHRFDAIVFATGYRSTAKKWLKSDGGGLIGDDGMA---SGRCPKGENGLYRAGLA 214
           + GG    F A     G+   ++ +  + GGG     G      G    G  G Y +G  
Sbjct: 73  YGGGSGGGFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFG 132

Query: 215 GRGIYGSGTDG 247
           G G +G G  G
Sbjct: 133 GLGGFGGGAGG 143

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>SELU_RALEJ (Q476K0) tRNA 2-selenouridine synthase (EC 2.9.1.-)|
           (Selenophosphate-dependent tRNA 2-selenouridine
           synthase)
          Length = 366

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = -3

Query: 211 QPSAVQPILPLG--TSPGRHPIVTDQPAAVALEPLLCRAAVPGGEDDGIEAVPLP 53
           Q +A Q  L LG  T  G+  ++ + PAAV LE L C      G   G  A P P
Sbjct: 137 QAAAKQDFLVLGGLTGTGKTDVIAEVPAAVDLEGLACHR----GSAFGRRAQPQP 187

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>SMAD5_BRARE (Q9W7E7) Mothers against decapentaplegic homolog 5 (SMAD 5)|
           (Mothers against DPP homolog 5) (Smad5) (Somitabun
           protein)
          Length = 464

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
 Frame = +3

Query: 21  ASKGTWWSSPAGSGTAS---MPSSSPPGT-----AARQRSGSRATAAG*SVTMGWRPGDV 176
           AS GT+ +SPA SG +S   +P+ +PP           + GS++   G S+     P ++
Sbjct: 199 ASSGTYPNSPASSGPSSPFQLPADTPPPAYMPPDEQMGQDGSQSMETGSSLA----PQNM 254

Query: 177 PRG 185
           PRG
Sbjct: 255 PRG 257

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>NADB_PYRAB (Q9V2R0) L-aspartate oxidase (EC 1.4.3.16) (LASPO) (Quinolinate|
           synthetase B)
          Length = 464

 Score = 28.9 bits (63), Expect = 7.5
 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
 Frame = +2

Query: 44  FAGGERHRFDAIVFATG-----YRSTAKKWLKSDGGGLIGD 151
           F  GE  +FDA+V ATG     YR TA   +K + G LIGD
Sbjct: 158 FLNGELLKFDAVVVATGGFSGLYRFTA--GVKENIGLLIGD 196

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>VG13_ICHV1 (Q00166) Hypothetical gene 13 zinc-binding protein|
          Length = 82

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/43 (41%), Positives = 20/43 (46%)
 Frame = -3

Query: 211 QPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVPGGE 83
           QP A QPI P G+  G H      P  VA  P+     VP GE
Sbjct: 36  QPMARQPIYPYGSPMGAH---VYYPPPVAQPPVRGPVRVPQGE 75

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>EXO70_GIBZE (Q4ILI9) Exocyst complex protein EXO70|
          Length = 632

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 179 KGENGLYRAGLAGRGIYGSGTDGEFIAE 262
           K  + +YRAG  G G Y    +G FI+E
Sbjct: 236 KSPDAVYRAGTNGMGTYAQAMEGLFISE 263

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>RAB12_CANFA (P51152) Ras-related protein Rab-12 (Fragment)|
          Length = 208

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 286 LKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILP 182
           LK++P D+LR+EL     ++ P P  P  + P  P
Sbjct: 169 LKKMPLDILRNELSNSILSLQPEPEIPPELPPPRP 203

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>ARDH_PICST (P50167) D-arabinitol 2-dehydrogenase [ribulose forming] (EC|
           1.1.1.250) (ARDH)
          Length = 278

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -3

Query: 340 IATVVGGDGSIASVIARALKQLPADV 263
           +A + GG G +A+VI+RAL    ADV
Sbjct: 18  LAIITGGSGGLAAVISRALLAQGADV 43

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>PME17_CHICK (Q98917) Melanocyte protein Pmel 17 precursor (115 kDa melanosomal|
           matrix protein)
          Length = 763

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 8/44 (18%)
 Frame = +3

Query: 48  PAGSGTASMPS--------SSPPGTAARQRSGSRATAAG*SVTM 155
           P GSGTA+ PS        ++P  TAA + SG+ A   G SV +
Sbjct: 335 PTGSGTATAPSNLTGSGTAAAPGTTAAPRASGAPAEPTGVSVAV 378

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>RAB12_RAT (P35284) Ras-related protein Rab-12 (Fragment)|
          Length = 197

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/35 (40%), Positives = 19/35 (54%)
 Frame = -3

Query: 286 LKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILP 182
           LK++P DVLR EL     ++ P P  P  + P  P
Sbjct: 158 LKKMPLDVLRSELSNSILSLQPEPEIPPELPPPRP 192

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>NKX61_MESAU (Q60554) Homeobox protein Nkx-6.1|
          Length = 364

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 42  SSPAGSGTASMPSSSPPGTAARQRSGSRATAA 137
           S P  SG A++PS+SP G+++   S + AT+A
Sbjct: 105 SMPVASG-AALPSASPSGSSSSSSSSASATSA 135

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>GLGB_HAEIN (P45177) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 730

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/58 (32%), Positives = 25/58 (43%)
 Frame = +3

Query: 30  GTWWSSPAGSGTASMPSSSPPGTAARQRSGSRATAAG*SVTMGWRPGDVPRGRMGCTA 203
           G+W   P G  + +    SP    A +R   RA  AG +V + W PG  P    G  A
Sbjct: 296 GSWGYQPLGLYSPTSRFGSPE---AFRRLVKRAHEAGINVILDWVPGHFPSDTHGLVA 350

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>RBM4_BRARE (Q6IQ97) RNA-binding protein 4 (RNA-binding motif protein 4)|
          Length = 419

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
 Frame = +2

Query: 11  AMTSIEG-DVVEFAGGERHRFDAIVFATGYRSTAKKWLKSDGGGLIGDDGMASGRCPKGE 187
           AM +I G D   F G    +  ++  +T    TA    +  G    G +G  S  CP  +
Sbjct: 124 AMEAISGLDNTAFQG----KLMSVKLSTSRLRTAPGMGERTGCYRCGQEGHWSKECPLDQ 179

Query: 188 NGLYRAGLAGRGI----YGSGTD 244
           NG YR G +  G     + SG D
Sbjct: 180 NGSYREGPSSEGFGPVRFDSGGD 202

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>STAB1_MOUSE (Q8R4Y4) Stabilin-1 precursor (FEEL-1 protein)|
          Length = 2571

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 19/49 (38%), Positives = 22/49 (44%)
 Frame = -3

Query: 313 SIASVIARALKQLPADVLRDELPVCAAAVDPSPCQPSAVQPILPLGTSP 167
           S  S  A   K LP    +D   VC A   P PCQPSA  P+     +P
Sbjct: 209 SQCSAEAPTCKCLPGYTQQDN--VCLA---PDPCQPSACSPLARCSVTP 252

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>NKX61_RAT (O35762) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 42  SSPAGSGTASMPSSSPPGTAARQRSGSRATAA 137
           S P  SG A++PS+SP G+++   S + AT+A
Sbjct: 106 SMPVASG-AALPSASPSGSSSSSSSSASATSA 136

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>NKX61_MOUSE (Q99MA9) Homeobox protein Nkx-6.1|
          Length = 365

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = +3

Query: 42  SSPAGSGTASMPSSSPPGTAARQRSGSRATAA 137
           S P  SG A++PS+SP G+++   S + AT+A
Sbjct: 106 SMPVASG-AALPSASPSGSSSSSSSSASATSA 136

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>CYB6_CHLLT (Q59297) Cytochrome bc complex cytochrome b subunit|
          Length = 427

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 17/50 (34%), Positives = 19/50 (38%)
 Frame = -3

Query: 235 AAVDPSPCQPSAVQPILPLGTSPGRHPIVTDQPAAVALEPLLCRAAVPGG 86
           A   P P  P A +P  P    PG         A  A +P   RAA P G
Sbjct: 12  APAKPKPAAPGAAKPAAPKAARPG--------AAKPAAKPAAPRAAAPSG 53

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>HUNB_DROAD (O46232) Protein hunchback (Fragments)|
          Length = 192

 Score = 28.5 bits (62), Expect = 9.7
 Identities = 20/63 (31%), Positives = 26/63 (41%), Gaps = 12/63 (19%)
 Frame = -3

Query: 283 KQLPADVLRDELPVCAAAVDPSPCQ------------PSAVQPILPLGTSPGRHPIVTDQ 140
           +Q P D L      CAAA+ PSP              P+ +Q I+P    P  +   T  
Sbjct: 78  QQQPMDTL------CAAAMTPSPSNNDQNSPLTWPGLPNPMQSIMPANLRPSPNTTTTTP 131

Query: 139 PAA 131
           PAA
Sbjct: 132 PAA 134


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,230,009
Number of Sequences: 219361
Number of extensions: 1203770
Number of successful extensions: 5686
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 5179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5653
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3304846491
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result