ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7n24 |
|---|---|
| Clone Library Name | barley_pub |
>LEP1_SYNY3 (P72660) Probable signal peptidase I-1 (EC 3.4.21.89) (SPase I-1)| (Leader peptidase I-1) Length = 196 Score = 107 bits (266), Expect = 3e-23 Identities = 52/117 (44%), Positives = 75/117 (64%) Frame = +3 Query: 249 VLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAPL 428 ++ A+ + LL + ++AEPR IPS SM PT + GDR++ E+VSY F PQV DI++F P Sbjct: 20 LMVALVLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPE 79 Query: 429 VLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFVLEPPDYEMDPVSV 599 +LQ GY FIKR++A G VEV +G + +G E+++LEPP Y + V V Sbjct: 80 LLQVQGYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRV 136
>LEP_PHOLA (Q51876) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 203 Score = 97.8 bits (242), Expect = 2e-20 Identities = 46/119 (38%), Positives = 77/119 (64%) Frame = +3 Query: 243 KTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRA 422 KT+ +V + L ++++AE R IPS+SM PT +V DR++ E++SY F P+ DI++F Sbjct: 33 KTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHP 92 Query: 423 PLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFVLEPPDYEMDPVSV 599 L+ S ++ FIKR++ G+ V+VT G++L+NG +E+++ PPDY+ P V Sbjct: 93 TEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKV 151
>LEP2_SYNY3 (P73157) Probable signal peptidase I-2 (EC 3.4.21.89) (SPase I-2)| (Leader peptidase I-2) Length = 218 Score = 96.7 bits (239), Expect = 5e-20 Identities = 50/126 (39%), Positives = 78/126 (61%) Frame = +3 Query: 222 NSCSDDAKTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVL 401 N+ + KT++ AV + + ++++AE R IPS SM PT + DR++ E++SY R+P+ Sbjct: 19 NTWLELGKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERG 78 Query: 402 DIVIFRAPLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFVLEPPDYE 581 +IV+F L+A + D FIKRI+ GD V V+ G + VNG + DE+++ PP YE Sbjct: 79 EIVVFNPTDALKAKNF--HDAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYE 136 Query: 582 MDPVSV 599 PV V Sbjct: 137 YGPVKV 142
>LEP_PSEFL (P26844) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 284 Score = 60.5 bits (145), Expect = 4e-09 Identities = 42/112 (37%), Positives = 59/112 (52%), Gaps = 14/112 (12%) Frame = +3 Query: 243 KTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFR------------ 386 K+ + + L+ +S+L EP IPS SM PT DVGD IL + SY R Sbjct: 64 KSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDVGDFILVNKFSYGIRLPVIDKKVIEVG 123 Query: 387 EPQVLDIVIFRAPLVLQALGYSSSDV-FIKRIVAKGGDIVEVT-DGQLLVNG 536 +PQ D+++FR P S +V +IKR+V GD+V T D +L +NG Sbjct: 124 DPQRGDVMVFRYP--------SDPNVNYIKRVVGLPGDVVRYTSDKRLFING 167
>LEP_MYCTU (Q10789) Probable signal peptidase I (EC 3.4.21.89) (SPase I)| (Leader peptidase I) Length = 294 Score = 58.2 bits (139), Expect = 2e-08 Identities = 47/145 (32%), Positives = 69/145 (47%), Gaps = 31/145 (21%) Frame = +3 Query: 249 VLAAVTVPLLHK--SYLAEPRSIPSKSMYPTFD-----VGDRILAERVSYIFREPQVLDI 407 VLA + V L + +++A P IPS+SM PT VGDRI+ +++SY F PQ D+ Sbjct: 70 VLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGDV 129 Query: 408 VIFRAP---------------------LVLQALGYSSSDV--FIKRIVAKGGDIVEV-TD 515 ++FR P L +G+ D +KR++A GG V+ +D Sbjct: 130 IVFRGPPSWNVGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRSD 189 Query: 516 GQLLVNGVVQDEDFVLEPPDYEMDP 590 L VNG E + L+P DP Sbjct: 190 TGLTVNGRPLKEPY-LDPATMMADP 213
>LEP_AQUAE (O67088) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 256 Score = 58.2 bits (139), Expect = 2e-08 Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%) Frame = +3 Query: 273 LLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAPLVLQALGYS 452 L + Y+A+ +IPS SM PT VGD IL ++ Y EP D+++F+ P Sbjct: 16 LFIREYIAQAYTIPSASMEPTLLVGDFILVNKLVYSLSEPMRGDMIVFKYP--------K 67 Query: 453 SSDV-FIKRIVAKGGDIVE 506 + D+ FIKRI+A+GGD VE Sbjct: 68 NPDIDFIKRIIARGGDTVE 86
>LEP_PSEAE (Q9I5G7) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 284 Score = 58.2 bits (139), Expect = 2e-08 Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 14/124 (11%) Frame = +3 Query: 243 KTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFR------------ 386 K+ + + L+ +S+L EP IPS SM PT +VGD IL + +Y R Sbjct: 64 KSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEVGDFILVNKFAYGIRLPVLDTKVIPIG 123 Query: 387 EPQVLDIVIFRAPLVLQALGYSSSDV-FIKRIVAKGGDIVEVT-DGQLLVNGVVQDEDFV 560 +PQ D+++FR P S ++ +IKR+V GD V T + +L VNG + E V Sbjct: 124 DPQRGDVMVFRYP--------SEPNINYIKRVVGLPGDTVRYTKEKRLYVNGELVAEKLV 175 Query: 561 LEPP 572 E P Sbjct: 176 GEEP 179
>LEP_MYCLE (O33021) Probable signal peptidase I (EC 3.4.21.89) (SPase I)| (Leader peptidase I) Length = 289 Score = 55.1 bits (131), Expect = 2e-07 Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 31/135 (22%) Frame = +3 Query: 249 VLAAVTVPLLHK--SYLAEPRSIPSKSMYPTFD-----VGDRILAERVSYIFREPQVLDI 407 +LA + + L + +++A P IPS+SM PT VGDRI+ ++++Y F PQ D+ Sbjct: 58 ILAVIAIGLYYVMLTFVARPYLIPSESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDV 117 Query: 408 VIFRAP--------------LVLQALGYSSSDV---------FIKRIVAKGGDIVEV-TD 515 ++F+ P +VL+++ + S V +KR++A GG V+ +D Sbjct: 118 IVFKGPPSWNTMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSD 177 Query: 516 GQLLVNGVVQDEDFV 560 L VNG E ++ Sbjct: 178 TGLTVNGKPLKEPYL 192
>LEPT_BACSU (P71013) Signal peptidase I T (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 193 Score = 53.9 bits (128), Expect = 3e-07 Identities = 32/105 (30%), Positives = 53/105 (50%) Frame = +3 Query: 222 NSCSDDAKTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVL 401 N+ + K ++ AV + LL + +L EP + SMYPT G+R+ + E + Sbjct: 18 NTYLEWGKAIVIAVLLALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKTVNYIGELKRG 77 Query: 402 DIVIFRAPLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNG 536 DIVI G +S ++KR++ K G+ V++ D L +NG Sbjct: 78 DIVIIN--------GETSKIHYVKRLIGKPGETVQMKDDTLYING 114
>LEP2_BACAM (P41025) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 193 Score = 53.1 bits (126), Expect = 6e-07 Identities = 33/110 (30%), Positives = 55/110 (50%) Frame = +3 Query: 207 LSRWVNSCSDDAKTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFR 386 + R N+ + K ++ AV + LL + +L EP + SMYPT G+R+ + Sbjct: 13 VKRKSNTYWEWGKAIIIAVALALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKSVNYIG 72 Query: 387 EPQVLDIVIFRAPLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNG 536 E + DIVI G +S ++KR++ K G+ VE+ + L +NG Sbjct: 73 EIERGDIVIIN--------GDTSKVHYVKRLIGKPGETVEMKNDTLYING 114
>LEP_BACLI (P42668) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 186 Score = 49.3 bits (116), Expect = 8e-06 Identities = 33/115 (28%), Positives = 55/115 (47%) Frame = +3 Query: 222 NSCSDDAKTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVL 401 NS + K ++ AV + LL +++L EP + SM PT G+R+ + E + Sbjct: 11 NSLFEWVKAIIIAVVLALLIRAFLFEPYLVEGTSMDPTLHDGERLFVYKTVRYVGEFKRG 70 Query: 402 DIVIFRAPLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFVLE 566 DIVI G + ++KR++ GD V++ D L +NG E ++ E Sbjct: 71 DIVIID--------GDEKNVHYVKRLIGLPGDTVQMKDDTLYINGKKVSEPYLSE 117
>LEP_HAEIN (P44454) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 349 Score = 49.3 bits (116), Expect = 8e-06 Identities = 41/126 (32%), Positives = 61/126 (48%), Gaps = 31/126 (24%) Frame = +3 Query: 219 VNSCSDDAKTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSY-----IF 383 ++ S+ ++ + V L +S+L EP IPS SM T VGD ++ + +Y IF Sbjct: 81 ISEASEFLSSLFPVLAVVFLVRSFLFEPFQIPSGSMESTLRVGDFLVVNKYAYGVKDPIF 140 Query: 384 R-------EPQVLDIVIFRAP---LVLQALG-----------YSSSD-----VFIKRIVA 485 + +PQ D+++F+AP L+ LG SS D +IKRIV Sbjct: 141 QNTIIAGEKPQRGDVIVFKAPQQALIRTGLGATRAAFAENLALSSKDNMSGVDYIKRIVG 200 Query: 486 KGGDIV 503 KGGD V Sbjct: 201 KGGDRV 206
>LEPS_BACSU (P28628) Signal peptidase I S (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 184 Score = 49.3 bits (116), Expect = 8e-06 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 1/108 (0%) Frame = +3 Query: 240 AKTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFR 419 AK ++ AV + LL ++++ P + SMYPT +R+ E DIV+ Sbjct: 16 AKAIVIAVVLALLIRNFIFAPYVVDGDSMYPTLHNRERVFVNMTVKYIGEFDRGDIVVL- 74 Query: 420 APLVLQALGYSSSDV-FIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFV 560 + DV ++KRI+ GD VE+ + QL +NG DE ++ Sbjct: 75 ----------NGDDVHYVKRIIGLPGDTVEMKNDQLYINGKKVDEPYL 112
>LEPV_BACSU (O07560) Signal peptidase I V (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 168 Score = 47.4 bits (111), Expect = 3e-05 Identities = 27/80 (33%), Positives = 40/80 (50%) Frame = +3 Query: 321 SMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAPLVLQALGYSSSDVFIKRIVAKGGDI 500 SM PTF G+ +L + S+ F+ DIV+F+ P V IKR++ G+ Sbjct: 34 SMNPTFQEGNELLVNKFSHRFKTIHRFDIVLFKGP---------DHKVLIKRVIGLPGET 84 Query: 501 VEVTDGQLLVNGVVQDEDFV 560 ++ D QL VNG E F+ Sbjct: 85 IKYKDDQLYVNGKQVAEPFL 104
>LEP_STAAC (Q5HHB9) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 47.4 bits (111), Expect = 3e-05 Identities = 28/105 (26%), Positives = 51/105 (48%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 ++ A + + ++ P +I +SM PT G+R+ V Y + ++V+F A Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHA- 69 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFV 560 + +D ++KR++ GD VE + L VNG QDE ++ Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYL 106
>LEP_STAAW (P0A069) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/105 (25%), Positives = 51/105 (48%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 ++ A + + ++ P +I +SM PT G+R+ + Y + ++V+F A Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFV 560 + +D ++KR++ GD VE + L VNG QDE ++ Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYL 106
>LEP_STAAU (P0A070) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/105 (25%), Positives = 51/105 (48%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 ++ A + + ++ P +I +SM PT G+R+ + Y + ++V+F A Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFV 560 + +D ++KR++ GD VE + L VNG QDE ++ Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYL 106
>LEP_STAAS (Q6GAW1) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/105 (25%), Positives = 51/105 (48%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 ++ A + + ++ P +I +SM PT G+R+ + Y + ++V+F A Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFV 560 + +D ++KR++ GD VE + L VNG QDE ++ Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYL 106
>LEP_STAAR (Q6GIC3) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/105 (25%), Positives = 51/105 (48%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 ++ A + + ++ P +I +SM PT G+R+ + Y + ++V+F A Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFV 560 + +D ++KR++ GD VE + L VNG QDE ++ Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYL 106
>LEP_STAAN (P0A068) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/105 (25%), Positives = 51/105 (48%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 ++ A + + ++ P +I +SM PT G+R+ + Y + ++V+F A Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFV 560 + +D ++KR++ GD VE + L VNG QDE ++ Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYL 106
>LEP_STAAM (P0A067) Signal peptidase IB (EC 3.4.21.89) (SPase IB) (Leader| peptidase IB) Length = 191 Score = 47.0 bits (110), Expect = 4e-05 Identities = 27/105 (25%), Positives = 51/105 (48%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 ++ A + + ++ P +I +SM PT G+R+ + Y + ++V+F A Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFV 560 + +D ++KR++ GD VE + L VNG QDE ++ Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYL 106
>LEP_BUCAP (Q8K9R0) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 312 Score = 45.4 bits (106), Expect = 1e-04 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 12/87 (13%) Frame = +3 Query: 282 KSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFRE------------PQVLDIVIFRAP 425 +S++ EP IPS SM PT +GD IL ++ SY +E PQ DIV+F+ P Sbjct: 75 RSFIYEPFQIPSGSMMPTLLIGDFILVKKFSYGIKEPITNKTIIKMNLPQRGDIVVFKHP 134 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVE 506 ++ +IKR+V GD ++ Sbjct: 135 --------KNNIDYIKRVVGLPGDKIQ 153
>LEPP_BACNA (P37943) Signal peptidase I P (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 186 Score = 45.1 bits (105), Expect = 2e-04 Identities = 28/98 (28%), Positives = 47/98 (47%) Frame = +3 Query: 243 KTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRA 422 K ++ AV + LL +++L EP + KSM PT +R+ + + DI+I Sbjct: 18 KAIVIAVILALLIRNFLFEPYVVEGKSMDPTLVDSERLFVNKTVKYTGNFKRGDIIILN- 76 Query: 423 PLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNG 536 G S ++KR++ GD VE+ + L +NG Sbjct: 77 -------GKEKSTHYVKRLIGLPGDTVEMKNDHLFING 107
>LEP_BUCBP (Q89AM6) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 310 Score = 44.3 bits (103), Expect = 3e-04 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%) Frame = +3 Query: 282 KSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIF-----RAPLVLQALG 446 ++++ EP IPS+SM PT GD IL ++ SY + P ++++F R +V+ Sbjct: 69 RTFICEPFQIPSESMMPTLLPGDFILVKKFSYGIKNPFSNNVIVFINTPKRGDIVVFKHP 128 Query: 447 YSSSDVFIKRIVAKGGD 497 +++ ++KRIV GD Sbjct: 129 NNNAINYVKRIVGLPGD 145
>LEPQ_BACNA (Q57350) Signal peptidase I P (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 185 Score = 43.9 bits (102), Expect = 4e-04 Identities = 28/111 (25%), Positives = 53/111 (47%) Frame = +3 Query: 234 DDAKTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVI 413 D K +L A+ + L +++L EP + +SM PT +R+ + + + DIV+ Sbjct: 14 DWIKAILIALILVFLVRTFLFEPYIVQGESMKPTLFNSERLFVNKFVKYTGDFKRGDIVV 73 Query: 414 FRAPLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFVLE 566 G ++KR++ GD +E+ + L VNG +E+++ E Sbjct: 74 LN--------GEEKKTHYVKRLIGLPGDTIEMKNDNLFVNGKRFNEEYLKE 116
>LEPH_STAAW (P0A065) Inactive signal peptidase IA| Length = 174 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/93 (23%), Positives = 46/93 (49%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 +++ A+ + L ++++ IP+ M PT + GDR++ ++ F + DI+ +R Sbjct: 10 SLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR-- 67 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQL 524 ++++ RI+AK G + GQL Sbjct: 68 --------RGNEIYTSRIIAKPGQSMAFRQGQL 92
>LEPH_STAAU (P0A066) Inactive signal peptidase IA| Length = 174 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/93 (23%), Positives = 46/93 (49%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 +++ A+ + L ++++ IP+ M PT + GDR++ ++ F + DI+ +R Sbjct: 10 SLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR-- 67 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQL 524 ++++ RI+AK G + GQL Sbjct: 68 --------RGNEIYTSRIIAKPGQSMAFRQGQL 92
>LEPH_STAAS (Q6GAW2) Inactive signal peptidase IA| Length = 174 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/93 (23%), Positives = 46/93 (49%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 +++ A+ + L ++++ IP+ M PT + GDR++ ++ F + DI+ +R Sbjct: 10 SLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR-- 67 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQL 524 ++++ RI+AK G + GQL Sbjct: 68 --------RGNEIYTSRIIAKPGQSMAFRQGQL 92
>LEPH_STAAR (Q6GIC4) Inactive signal peptidase IA| Length = 174 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/93 (23%), Positives = 46/93 (49%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 +++ A+ + L ++++ IP+ M PT + GDR++ ++ F + DI+ +R Sbjct: 10 SLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR-- 67 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQL 524 ++++ RI+AK G + GQL Sbjct: 68 --------RGNEIYTSRIIAKPGQSMAFRQGQL 92
>LEPH_STAAN (P0A064) Inactive signal peptidase IA| Length = 174 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/93 (23%), Positives = 46/93 (49%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 +++ A+ + L ++++ IP+ M PT + GDR++ ++ F + DI+ +R Sbjct: 10 SLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR-- 67 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQL 524 ++++ RI+AK G + GQL Sbjct: 68 --------RGNEIYTSRIIAKPGQSMAFRQGQL 92
>LEPH_STAAM (P0A063) Inactive signal peptidase IA| Length = 174 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/93 (23%), Positives = 46/93 (49%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 +++ A+ + L ++++ IP+ M PT + GDR++ ++ F + DI+ +R Sbjct: 10 SLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR-- 67 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQL 524 ++++ RI+AK G + GQL Sbjct: 68 --------RGNEIYTSRIIAKPGQSMAFRQGQL 92
>LEPH_STAAC (Q5HHC0) Inactive signal peptidase IA| Length = 174 Score = 43.5 bits (101), Expect = 5e-04 Identities = 22/93 (23%), Positives = 46/93 (49%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAP 425 +++ A+ + L ++++ IP+ M PT + GDR++ ++ F + DI+ +R Sbjct: 10 SLILAIIIVLFVQTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR-- 67 Query: 426 LVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQL 524 ++++ RI+AK G + GQL Sbjct: 68 --------RGNEIYTSRIIAKPGQSMAFRQGQL 92
>LEP_BUCAI (P57347) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 314 Score = 43.5 bits (101), Expect = 5e-04 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 12/84 (14%) Frame = +3 Query: 282 KSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFREP---QVL---------DIVIFRAP 425 +S++ EP IPS SM PT VGD IL E+ SY +EP ++L DI +F+ P Sbjct: 75 RSFIYEPFQIPSGSMMPTLLVGDFILVEKFSYGIKEPITHKILIRTKKPNRGDIAVFQHP 134 Query: 426 LVLQALGYSSSDVFIKRIVAKGGD 497 + +IKRI+ GD Sbjct: 135 T-------DHNINYIKRIIGLPGD 151
>LEP_SALTY (P0A1W2) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 324 Score = 43.1 bits (100), Expect = 6e-04 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 12/72 (16%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFRE------------ 389 +V + + L+ +S+L EP IPS SM PT +GD IL E+ +Y ++ Sbjct: 66 SVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGH 125 Query: 390 PQVLDIVIFRAP 425 P+ DIV+F+ P Sbjct: 126 PKRGDIVVFKYP 137
>LEP_SALTI (P0A1W3) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 324 Score = 43.1 bits (100), Expect = 6e-04 Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 12/72 (16%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFRE------------ 389 +V + + L+ +S+L EP IPS SM PT +GD IL E+ +Y ++ Sbjct: 66 SVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGH 125 Query: 390 PQVLDIVIFRAP 425 P+ DIV+F+ P Sbjct: 126 PKRGDIVVFKYP 137
>LEP1_BACAM (P41026) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 185 Score = 43.1 bits (100), Expect = 6e-04 Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 3/112 (2%) Frame = +3 Query: 234 DDAKTVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAER-VSYI--FREPQVLD 404 D AK ++ AV + +L +++L P + +SM PT +RI V YI F+ Q++ Sbjct: 16 DWAKAIIIAVVLAVLIRNFLFAPYVVDGESMEPTLHDRERIFVNMTVKYISDFKRGQIVV 75 Query: 405 IVIFRAPLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDEDFV 560 + ++ ++KRI+ GD V++ + QL +NG E ++ Sbjct: 76 L-------------NGENEHYVKRIIGLPGDTVQMKNDQLYINGKKVSEPYL 114
>LEP_ECOLI (P00803) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 324 Score = 42.7 bits (99), Expect = 8e-04 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 12/98 (12%) Frame = +3 Query: 246 TVLAAVTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIFRE------------ 389 +V + + L+ +S++ EP IPS SM PT +GD IL E+ +Y ++ Sbjct: 66 SVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGH 125 Query: 390 PQVLDIVIFRAPLVLQALGYSSSDVFIKRIVAKGGDIV 503 P+ DIV+F+ P +IKR V GD V Sbjct: 126 PKRGDIVVFKYP-------EDPKLDYIKRAVGLPGDKV 156
>LEP_BACCL (P41027) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 182 Score = 41.6 bits (96), Expect = 0.002 Identities = 22/84 (26%), Positives = 42/84 (50%) Frame = +3 Query: 309 IPSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAPLVLQALGYSSSDVFIKRIVAK 488 + KSM PT + G+ ++ ++SY + DI++F A + + ++KR++ Sbjct: 34 VEGKSMMPTLESGNLLIVNKLSYDIGPIRRFDIIVFHA---------NKKEDYVKRVIGL 84 Query: 489 GGDIVEVTDGQLLVNGVVQDEDFV 560 GD + + L VNG DE ++ Sbjct: 85 PGDRIAYKNDILYVNGKKVDEPYL 108
>LEP_RICCN (Q92JB1) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 266 Score = 38.1 bits (87), Expect = 0.020 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 20/111 (18%) Frame = +3 Query: 261 VTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIF------------------- 383 + + LL + + EP ++P+ SM T D I + + SY + Sbjct: 25 ICIALLIRILIMEPFNVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRIF 84 Query: 384 -REPQVLDIVIFRAPLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVN 533 REP DIV+FR P S +IKR++ GD +++ D + +N Sbjct: 85 AREPDRGDIVVFRPP-------NDMSVRYIKRLIGLPGDKIQLIDDVIYIN 128
>LEP_RICPR (Q9ZE32) Signal peptidase I (EC 3.4.21.89) (SPase I) (Leader| peptidase I) Length = 264 Score = 37.7 bits (86), Expect = 0.026 Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 20/111 (18%) Frame = +3 Query: 261 VTVPLLHKSYLAEPRSIPSKSMYPTFDVGDRILAERVSYIF------------------- 383 + + L+ + + EP ++P+ SM T D I + + SY + Sbjct: 23 ICIALVIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIHLFKGRVF 82 Query: 384 -REPQVLDIVIFRAPLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVN 533 REP+ DIV+FR P S +IKR++ GD +++ D + +N Sbjct: 83 AREPERGDIVVFRPP-------NDMSVRYIKRLIGLPGDKIQLIDDVIYIN 126
>FTSK_SALTY (Q8ZQD5) DNA translocase ftsK| Length = 1351 Score = 31.6 bits (70), Expect = 1.8 Identities = 24/98 (24%), Positives = 39/98 (39%) Frame = -3 Query: 525 IIDHQSLQRCPLPWPQFS**THHLSCSPMPEGLEVHGRSQCPKLEAPGKYMKPSRRESGH 346 ++ +++ P+P PQ T +P PEG + H + P+ + +P S Sbjct: 350 VVAQPTVEWQPVPGPQ----TGEPVIAPAPEGYQPHPQYAQPQEAQSAPWQQPVPVASAP 405 Query: 345 QHQMLDTLISKGWTAAQLDRICGAEVQSQQQGRSLHHP 232 Q+ TAA+ D + E Q Q Q H P Sbjct: 406 QYAATPA------TAAEYDSLAPQETQPQWQPEPTHQP 437
>RPOB_AQUPY (Q9X6Y1) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1469 Score = 31.6 bits (70), Expect = 1.8 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 2/98 (2%) Frame = +3 Query: 300 PRSI--PSKSMYPTFDVGDRILAERVSYIFREPQVLDIVIFRAPLVLQALGYSSSDVFIK 473 PR + PS S+ P + D A S + R Q + ++ +APLV + + Sbjct: 738 PRQVISPSSSLIPFLEHDDANRALMGSNMQR--QAVPLIFTQAPLVGTGMEKKIARDSHA 795 Query: 474 RIVAKGGDIVEVTDGQLLVNGVVQDEDFVLEPPDYEMD 587 +VAK G +VE DG ++ V +E + +P D +D Sbjct: 796 VVVAKRGGVVEEVDGSKIIVRVNPEEINLEDPLDIGID 833
>VP06_BPPRD (P27379) Protein P6| Length = 166 Score = 30.0 bits (66), Expect = 5.3 Identities = 22/92 (23%), Positives = 36/92 (39%) Frame = +3 Query: 42 ALFGSSGAVAAPTQVGSVVAPLVGTSGVAPGAAGVVRQXXXXXXXXXXXXKRTSWLSRWV 221 A + GA AA Q A + T A A +Q ++ SWL V Sbjct: 30 AAIKAEGAAAAAEQSAEQAAVMAATLA-ASVEANAAQQIAEHSEQVQTQEEKISWLENQV 88 Query: 222 NSCSDDAKTVLAAVTVPLLHKSYLAEPRSIPS 317 + + + + + AVT + +S EP +P+ Sbjct: 89 MAMASNLQMMQEAVTALTVSQSLTPEPSPVPA 120
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 30.0 bits (66), Expect = 5.3 Identities = 17/34 (50%), Positives = 23/34 (67%), Gaps = 4/34 (11%) Frame = +3 Query: 45 LFGSSGAVAAPTQVGS--VVAP--LVGTSGVAPG 134 ++GS+G AAPT + + V P L+GT GVAPG Sbjct: 697 MYGSAGPPAAPTSLPTPPVTQPVSLLGTQGVAPG 730
>TRPC_MYCLE (Q9X7C7) Indole-3-glycerol phosphate synthase (EC 4.1.1.48) (IGPS)| Length = 272 Score = 29.6 bits (65), Expect = 6.9 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = +3 Query: 213 RWVNSCSDDAKTVLAAVTVPLLHKSYLAEPRSI 311 R N DD V AAV+VP+L K ++ +P I Sbjct: 96 RRFNGSLDDLDAVRAAVSVPVLRKDFVVQPYQI 128
>BUK_BACTN (Q8A4P5) Probable butyrate kinase (EC 2.7.2.7) (BK) (Branched-chain| carboxylic acid kinase) Length = 353 Score = 29.6 bits (65), Expect = 6.9 Identities = 16/54 (29%), Positives = 26/54 (48%) Frame = +3 Query: 390 PQVLDIVIFRAPLVLQALGYSSSDVFIKRIVAKGGDIVEVTDGQLLVNGVVQDE 551 PQV+D FR LVLQ L + ++ +GG + + G VN ++ + Sbjct: 40 PQVIDQFEFRKNLVLQELEANGIPFAFDAVIGRGGLVKPIPGGVYAVNEAMKQD 93
>RPOB_CAUCR (Q9AAU2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1356 Score = 29.3 bits (64), Expect = 9.1 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 16/89 (17%) Frame = +3 Query: 318 KSMYPTFDVGDRILAERVSYIFREPQ------VLDIVIFRAPL--VLQALGYSSSDVF-- 467 KS++P D +R + E VSY F EP+ + + F APL L+ + + + + Sbjct: 58 KSVFPIKDFNERAVLEYVSYEFEEPKYDVEECIQRDMTFAAPLKVKLRLIVFETEEETGA 117 Query: 468 -----IKRIVAKGGDIVEVTD-GQLLVNG 536 IK GDI +TD G +VNG Sbjct: 118 RSVKDIKEQDVYMGDIPLMTDKGTFIVNG 146 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,464,255 Number of Sequences: 219361 Number of extensions: 1562540 Number of successful extensions: 4244 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 4112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4218 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5253413348 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
