| Clone Name | baal7n23 |
|---|---|
| Clone Library Name | barley_pub |
>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)| (Transitional endoplasmic reticulum ATPase E) Length = 810 Score = 246 bits (627), Expect = 3e-65 Identities = 115/130 (88%), Positives = 125/130 (96%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAILERKKSPNRLVVDEA NDDNSVV+LHP TME+LQLFRGDT+L+KGKKRKDT+CI LA Sbjct: 18 TAILERKKSPNRLVVDEAINDDNSVVSLHPTTMEKLQLFRGDTILIKGKKRKDTVCIALA 77 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 D+TCEEPKIRMNK VR NLRVRLGDV+SVHQCPDVKYGKRVHILP+DDTVEG+TGNLFDA Sbjct: 78 DETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDA 137 Query: 479 FLKPYFLEAY 508 +LKPYFLEAY Sbjct: 138 YLKPYFLEAY 147
>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing| protein homolog) (VCP) Length = 807 Score = 245 bits (626), Expect = 4e-65 Identities = 116/130 (89%), Positives = 123/130 (94%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAILERKKSPNRLVVDEA NDDNSVV +HP TME+LQLFRGDT+L+KGKKRKDTICI LA Sbjct: 19 TAILERKKSPNRLVVDEAVNDDNSVVTMHPQTMEKLQLFRGDTILIKGKKRKDTICIALA 78 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 D+ CEEPKIRMNK VR NLRVRLGDVVSVHQCPDVKYGKRVHILPIDDT+EG+TGNLFDA Sbjct: 79 DENCEEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGVTGNLFDA 138 Query: 479 FLKPYFLEAY 508 FLKPYFLEAY Sbjct: 139 FLKPYFLEAY 148
>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)| Length = 809 Score = 245 bits (626), Expect = 4e-65 Identities = 115/130 (88%), Positives = 125/130 (96%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAILERKKSPNRLVVDEA NDDNSVV+LHP TME+LQLFRGDT+L+KGKKRKDT+CI LA Sbjct: 18 TAILERKKSPNRLVVDEAINDDNSVVSLHPATMEKLQLFRGDTILIKGKKRKDTVCIALA 77 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 D+TCEEPKIRMNK VR NLRVRLGDV+SVHQCPDVKYGKRVHILP+DDTVEG+TGNLFDA Sbjct: 78 DETCEEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGKRVHILPVDDTVEGVTGNLFDA 137 Query: 479 FLKPYFLEAY 508 +LKPYFLEAY Sbjct: 138 YLKPYFLEAY 147
>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D| (AtCDC48d) (Transitional endoplasmic reticulum ATPase D) Length = 815 Score = 237 bits (604), Expect = 2e-62 Identities = 108/130 (83%), Positives = 124/130 (95%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAILE+KK+ NRLVVDEA NDDNSVV+LHPDTME+LQLFRGDT+L+KGKKRKDT+CI LA Sbjct: 19 TAILEKKKAANRLVVDEAINDDNSVVSLHPDTMEKLQLFRGDTILIKGKKRKDTVCIALA 78 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 D+TC+EPKIRMNK VR NLRVRLGDV+SVHQCPDVKYG RVHILP+DDT+EG++GN+FDA Sbjct: 79 DETCDEPKIRMNKVVRSNLRVRLGDVISVHQCPDVKYGNRVHILPLDDTIEGVSGNIFDA 138 Query: 479 FLKPYFLEAY 508 +LKPYFLEAY Sbjct: 139 YLKPYFLEAY 148
>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog| Length = 805 Score = 237 bits (604), Expect = 2e-62 Identities = 113/130 (86%), Positives = 123/130 (94%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAILERKK+ NRLVVDEA NDDNSVVALHP TME+LQLFRGDT+L+KGKKRKDT+ I LA Sbjct: 19 TAILERKKAANRLVVDEAVNDDNSVVALHPATMEKLQLFRGDTILIKGKKRKDTVVIALA 78 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 D+TC+EPKIRMNK VR NLRVRLGDVVSVHQCPDVKYGKRVHILPIDDT+EG+TG+LFDA Sbjct: 79 DETCDEPKIRMNKVVRSNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTIEGLTGDLFDA 138 Query: 479 FLKPYFLEAY 508 FLKPYFLEAY Sbjct: 139 FLKPYFLEAY 148
>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 208 bits (530), Expect = 6e-54 Identities = 96/130 (73%), Positives = 114/130 (87%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAIL++K PNRL+VDEA N+DNSVV+L M+ LQLFRGDTVLLKGKKR++ +CIVL+ Sbjct: 13 TAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLS 72 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 DDTC + KIRMN+ VR NLRVRLGDV+S+ CPDVKYGKR+H+LPIDDTVEGITGNLF+ Sbjct: 73 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 132 Query: 479 FLKPYFLEAY 508 +LKPYFLEAY Sbjct: 133 YLKPYFLEAY 142
>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 208 bits (530), Expect = 6e-54 Identities = 96/130 (73%), Positives = 114/130 (87%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAIL++K PNRL+VDEA N+DNSVV+L M+ LQLFRGDTVLLKGKKR++ +CIVL+ Sbjct: 13 TAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLS 72 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 DDTC + KIRMN+ VR NLRVRLGDV+S+ CPDVKYGKR+H+LPIDDTVEGITGNLF+ Sbjct: 73 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 132 Query: 479 FLKPYFLEAY 508 +LKPYFLEAY Sbjct: 133 YLKPYFLEAY 142
>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 208 bits (530), Expect = 6e-54 Identities = 96/130 (73%), Positives = 114/130 (87%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAIL++K PNRL+VDEA N+DNSVV+L M+ LQLFRGDTVLLKGKKR++ +CIVL+ Sbjct: 13 TAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLS 72 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 DDTC + KIRMN+ VR NLRVRLGDV+S+ CPDVKYGKR+H+LPIDDTVEGITGNLF+ Sbjct: 73 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 132 Query: 479 FLKPYFLEAY 508 +LKPYFLEAY Sbjct: 133 YLKPYFLEAY 142
>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) Length = 805 Score = 207 bits (527), Expect = 1e-53 Identities = 96/130 (73%), Positives = 114/130 (87%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAIL++K PNRL+VDE+ N+DNSVV+L M+ LQLFRGDTVLLKGKKR++ +CIVL+ Sbjct: 14 TAILKQKSRPNRLIVDESINEDNSVVSLSQAKMDELQLFRGDTVLLKGKKRREAVCIVLS 73 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 DDTC + KIRMN+ VR NLRVRLGDV+S+ CPDVKYGKRVH+LPIDDTVEGITGNLF+ Sbjct: 74 DDTCSDEKIRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRVHVLPIDDTVEGITGNLFEV 133 Query: 479 FLKPYFLEAY 508 +LKPYFLEAY Sbjct: 134 YLKPYFLEAY 143
>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)| (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing protein) (VCP) Length = 805 Score = 206 bits (525), Expect = 2e-53 Identities = 95/130 (73%), Positives = 113/130 (86%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAIL++K PNRL+VDEA N+DNSVV+L M+ LQLFRGDTVLLKGKKR++ +CIVL+ Sbjct: 13 TAILKQKNRPNRLIVDEAINEDNSVVSLSQPKMDELQLFRGDTVLLKGKKRREAVCIVLS 72 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 DDTC + KIRMN+ VR NLRV LGDV+S+ CPDVKYGKR+H+LPIDDTVEGITGNLF+ Sbjct: 73 DDTCSDEKIRMNRVVRNNLRVHLGDVISIQPCPDVKYGKRIHVLPIDDTVEGITGNLFEV 132 Query: 479 FLKPYFLEAY 508 +LKPYFLEAY Sbjct: 133 YLKPYFLEAY 142
>CDC48_YEAST (P25694) Cell division control protein 48| Length = 835 Score = 188 bits (478), Expect = 6e-48 Identities = 86/130 (66%), Positives = 109/130 (83%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAIL RKK N L+VD+A NDDNSV+A++ +TM++L+LFRGDTVL+KGKKRKDT+ IVL Sbjct: 24 TAILRRKKKDNMLLVDDAINDDNSVIAINSNTMDKLELFRGDTVLVKGKKRKDTVLIVLI 83 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 DD E+ R+N+ VR NLR+RLGD+V++H CPD+KY R+ +LPI DT+EGITGNLFD Sbjct: 84 DDELEDGACRINRVVRNNLRIRLGDLVTIHPCPDIKYATRISVLPIADTIEGITGNLFDV 143 Query: 479 FLKPYFLEAY 508 FLKPYF+EAY Sbjct: 144 FLKPYFVEAY 153
>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48| Length = 815 Score = 185 bits (470), Expect = 5e-47 Identities = 86/146 (58%), Positives = 112/146 (76%) Frame = +2 Query: 71 QGEAXXXXXXXXXXXXTAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTV 250 QGE TAIL +K+ PN LVVD+ATNDDNSV+ L +TME LQLFRGDTV Sbjct: 18 QGENPPKDTYSAEDTATAILRKKRKPNSLVVDDATNDDNSVITLSSNTMETLQLFRGDTV 77 Query: 251 LLKGKKRKDTICIVLADDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHIL 430 ++KGK+RKDT+ IVL D+ E+ R+N+ VR NLRVRLGD+V+++ CPD+KY +R+ +L Sbjct: 78 VVKGKRRKDTVLIVLTDEEMEDGVARINRVVRNNLRVRLGDIVTINPCPDIKYAERISVL 137 Query: 431 PIDDTVEGITGNLFDAFLKPYFLEAY 508 P+ DTVEG+TG+LFD +LKPYF+EAY Sbjct: 138 PLADTVEGLTGSLFDVYLKPYFVEAY 163
>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1| (p97/CDC48 homolog 1) Length = 809 Score = 179 bits (455), Expect = 3e-45 Identities = 80/130 (61%), Positives = 106/130 (81%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAIL+ K PNRL+VD++ DDNSV+A+ M+ L LFRGD V+LKGKKRK+++ I+++ Sbjct: 20 TAILKDKVKPNRLIVDQSEQDDNSVIAVSQAKMDELGLFRGDAVILKGKKRKESVAIIVS 79 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 D++C K+RMN+ VR NLR+RLGDVVS+ P++ YG R+H+LPIDDT+EG+TGNLFD Sbjct: 80 DESCPNEKVRMNRVVRNNLRIRLGDVVSITPAPNLSYGTRIHVLPIDDTIEGLTGNLFDV 139 Query: 479 FLKPYFLEAY 508 FLKPYFLEAY Sbjct: 140 FLKPYFLEAY 149
>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2| (p97/CDC48 homolog 2) Length = 810 Score = 171 bits (434), Expect = 8e-43 Identities = 82/130 (63%), Positives = 103/130 (79%) Frame = +2 Query: 119 TAILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLA 298 TAIL+ KK PNRL++D++ NDDNS+V L M+ L LFRGD+V+LKGKKR++T+ IVL Sbjct: 20 TAILKDKKRPNRLIIDQSDNDDNSMVMLSQAKMDELGLFRGDSVILKGKKRRETVSIVLN 79 Query: 299 DDTCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGITGNLFDA 478 D C KI+MNK VR NLR RLGDVVS+ ++YGKRVH+LPIDDT+EG+TGNLFD Sbjct: 80 ADNCPNDKIKMNKVVRNNLRSRLGDVVSISSA-QLEYGKRVHVLPIDDTIEGLTGNLFDV 138 Query: 479 FLKPYFLEAY 508 FL+PYF +AY Sbjct: 139 FLRPYFTDAY 148
>CDAT_PLAF7 (P46468) Putative cell division cycle ATPase| Length = 1229 Score = 60.1 bits (144), Expect = 3e-09 Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 2/129 (1%) Frame = +2 Query: 128 LERKKSPNRLVVDEAT-NDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLADD 304 L+ K P +V+ N DN + + + M+ L + G TVLLKGKK+++ + I D Sbjct: 333 LDSGKFPTYCLVENIDENLDNFDIYMSKEKMDELNINDGATVLLKGKKKREMLGIARLDR 392 Query: 305 TCEEPKIRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTVEGIT-GNLFDAF 481 + ++ + ++ ++KNLR+ D++ +H + K + V + P DT+ ++ L A Sbjct: 393 SLKKHYVVISFAMKKNLRLMHNDIIKIHPFMNAKRIRNVVLSPFSDTIPNLSREELEKAV 452 Query: 482 LKPYFLEAY 508 + PY +Y Sbjct: 453 IHPYLKNSY 461
>Y1156_METJA (Q58556) Cell division cycle protein 48 homolog MJ1156| Length = 903 Score = 35.0 bits (79), Expect = 0.12 Identities = 32/97 (32%), Positives = 48/97 (49%), Gaps = 4/97 (4%) Frame = +2 Query: 155 LVVDEATNDD--NSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLADDTCEEPK-- 322 L V EA D + + P TME L L GD + ++G K K IV + K Sbjct: 5 LKVAEAYQGDVGRGIARIDPYTMEELGLKPGDVIEIEGPKGK-AYAIVYRGFLEDAGKGI 63 Query: 323 IRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILP 433 IR++ +R+N V +GD V V + ++K K+V + P Sbjct: 64 IRIDGYLRQNAGVAIGDRVKVKRV-EIKEAKKVVLAP 99
>PLSB_CUCSA (Q39639) Glycerol-3-phosphate acyltransferase, chloroplast| precursor (EC 2.3.1.15) (GPAT) Length = 470 Score = 32.7 bits (73), Expect = 0.58 Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 4/109 (3%) Frame = -2 Query: 384 TDTTSPSRTRKFFLTVLFILIFGSSQVSSASTMQIVSF-LFLPLSRTVSPRK---SWSLS 217 + ++ PS F L+ L F + +S+ S LFLPLS +P K S Sbjct: 13 SSSSVPSSLPPFSLSPSISLSFSRVSLPPSSSSSSSSLKLFLPLSLHFTPPKLSSPHSFL 72 Query: 216 MVSGWRATTELSSLVASSTTSRLGDFFRSRMAVE*SFFDLGSEEEASPC 70 S RA EL S+ T D R+ +F DL SEEE C Sbjct: 73 RFSASRAMAELIQDKESAHTPSTTDVTRNDPPHSRAFLDLRSEEELLSC 121
>SAV_SULAC (Q07590) SAV protein| Length = 780 Score = 32.7 bits (73), Expect = 0.58 Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 2/79 (2%) Frame = +2 Query: 161 VDEATNDD--NSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLADDTCEEPKIRMN 334 V EA D V + +M +L + GD + + G+ + V+ + +IR++ Sbjct: 42 VTEARQRDVGKKVARISETSMRKLNVEAGDYIEIIGQDGNSALAQVMPAYDISDDEIRID 101 Query: 335 KTVRKNLRVRLGDVVSVHQ 391 +RK+++V +GD V+V + Sbjct: 102 GYIRKSIKVGIGDDVTVRK 120
>VGLH_BHV1C (P27599) Glycoprotein H precursor| Length = 842 Score = 32.7 bits (73), Expect = 0.58 Identities = 19/45 (42%), Positives = 24/45 (53%) Frame = +1 Query: 10 RRDPAAPANPRSARHGRPDAAGRGLLLRSQVEEGLLDGHPRAEEV 144 RR P+A P +A H AA GL L + E L DG+ AEE+ Sbjct: 354 RRGPSAGPAPNAAYHAYRVAARLGLALSALTEGALADGYVLAEEL 398
>MAST3_HUMAN (O60307) Microtubule-associated serine/threonine-protein kinase 3| (EC 2.7.11.1) Length = 1309 Score = 32.0 bits (71), Expect = 0.98 Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = -2 Query: 372 SPSRTRKFFLTVLFILIFGSSQVSSASTMQIVSFLFLPLSRTVSPRKSWSL-SMVSGWRA 196 +PS T L+ L + GSS + S S L P +R R+ WSL S+ S Sbjct: 37 TPSPTLSRPLSPLSVPTAGSSPLDSPRNFSAASALNFPFARRADGRR-WSLASLPSSGYG 95 Query: 195 TTELSSLVASSTTSR 151 T SS ++SS++SR Sbjct: 96 TNTPSSTLSSSSSSR 110
>MBP1_YEAST (P39678) Transcription factor MBP1 (MBF subunit p120)| Length = 833 Score = 31.2 bits (69), Expect = 1.7 Identities = 21/78 (26%), Positives = 40/78 (51%) Frame = +2 Query: 149 NRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLADDTCEEPKIR 328 N+L+ DE N+ V +T+ERL+L + T+L +K K + + +D + K R Sbjct: 726 NKLIEDETQATTNNTVEKDNNTLERLELAQELTMLQLQRKNKLSSLVKKFEDNAKIHKYR 785 Query: 329 MNKTVRKNLRVRLGDVVS 382 + +R+ + + +V S Sbjct: 786 --RIIREGTEMNIEEVDS 801
>KADX_CAEEL (P34346) Probable adenylate kinase isoenzyme C29E4.8 (EC 2.7.4.3)| (ATP-AMP transphosphorylase) Length = 251 Score = 30.0 bits (66), Expect = 3.7 Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 4/105 (3%) Frame = +2 Query: 125 ILERKKSPNRLVVDEATNDDNSVVALHPDTMERLQLFRGDTVLLKGKKRKDTICIVLADD 304 ILER+K+P VV+ DD V + T + G + L+ K K + + DD Sbjct: 125 ILERRKTPLDTVVEFNIADDLLVRRI---TGRLFHIASGRSYHLEFKPPK----VPMKDD 177 Query: 305 TCEEPKIRMNKTVRKNLRVRLGDVVSVHQ--CPDVKYGKR--VHI 427 EP IR + + LR RL V HQ P V Y K+ VH+ Sbjct: 178 LTGEPLIRRSDDNEETLRKRL---VQYHQMTVPLVDYYKKHGVHV 219
>SYI_MYCMS (Q6MT28) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 915 Score = 29.6 bits (65), Expect = 4.9 Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 2/90 (2%) Frame = -1 Query: 481 EGIKQVSSNAFNCVINRKYVHTLAVFHVWALVNRHHITKSHSQVFPDGLVH--SDFWLLT 308 E +K + N ++ YVH L + +V HH+T GLVH S F Sbjct: 280 ENVKVIKEIDANKLVGLNYVHPLYDTKISKVVLGHHVTSESG----SGLVHIASGFGEDD 335 Query: 307 SVICKHNADCILPFLTLEQDGVAAEELEPL 218 +I K N I PF ++ G ++ L Sbjct: 336 FLIAKQNN--IKPFAPIDNQGKFTTQISDL 363
>LEXA_PECCC (Q04596) LexA repressor (EC 3.4.21.88)| Length = 202 Score = 28.9 bits (63), Expect = 8.3 Identities = 15/42 (35%), Positives = 27/42 (64%) Frame = +2 Query: 323 IRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTV 448 +R++ KN+ + GD+++VH+ DV+ G+ V + IDD V Sbjct: 113 LRVSGMSMKNIGIMDGDLLAVHKTEDVRNGQIV-VARIDDEV 153
>LEXA_ERWCT (Q6D9I5) LexA repressor (EC 3.4.21.88)| Length = 202 Score = 28.9 bits (63), Expect = 8.3 Identities = 15/42 (35%), Positives = 27/42 (64%) Frame = +2 Query: 323 IRMNKTVRKNLRVRLGDVVSVHQCPDVKYGKRVHILPIDDTV 448 +R++ KN+ + GD+++VH+ DV+ G+ V + IDD V Sbjct: 113 LRVSGMSMKNIGIMDGDLLAVHKTEDVRNGQIV-VARIDDEV 153 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,996,404 Number of Sequences: 219361 Number of extensions: 1093350 Number of successful extensions: 3677 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 3600 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3673 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3696665728 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)