ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8c19
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YJK3_YEAST (P42950) Putative 70.4 kDa transcriptional regulatory... 32 1.5
2LGT_MYCGA (Q7NAE3) Prolipoprotein diacylglyceryl transferase (EC... 30 3.4
3FCGR1_HUMAN (P12314) High affinity immunoglobulin gamma Fc recep... 29 7.7

>YJK3_YEAST (P42950) Putative 70.4 kDa transcriptional regulatory protein in|
           IME2-MEF2 intergenic region
          Length = 618

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 6/74 (8%)
 Frame = +3

Query: 81  MIKAHNYKDVRTKL--TLTNLFVSDK*INESKKVRDTHN*EGGSFFF*YN*RYRQL*ERY 254
           +IK HNYK   TKL  TL   F+    I++S  V+D H+ +  +  +      R + ERY
Sbjct: 380 LIKPHNYKLAYTKLLTTLRKKFLEGAEIDKSASVKDEHSTQKHNLRYDLEVIIRSILERY 439

Query: 255 ----FSFSGKLIRE 284
                S +  +I E
Sbjct: 440 APIFISLTSNMIEE 453



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>LGT_MYCGA (Q7NAE3) Prolipoprotein diacylglyceryl transferase (EC 2.4.99.-)|
          Length = 369

 Score = 30.4 bits (67), Expect = 3.4
 Identities = 22/82 (26%), Positives = 38/82 (46%)
 Frame = +2

Query: 209 LFLIQLEIQTIMREILFFFWKANKGITRIYNKCTLHCENLSKNKYTLYKKMKVVEIRTRS 388
           LFL+   I  I  + +F  ++  K    ++NK  ++   L KN    YK +   EIR + 
Sbjct: 282 LFLLGGSIGFIFTQWIFPRFRNKKNYFFLFNKVKIYFIGLFKNYLNKYKNLTKEEIRKKL 341

Query: 389 VTATYFYKNPSFKIIFFLISCY 454
             ++  Y + +F  +FF    Y
Sbjct: 342 EPSSTIY-SKNFSEMFFYADDY 362



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>FCGR1_HUMAN (P12314) High affinity immunoglobulin gamma Fc receptor I precursor|
           (Fc-gamma RI) (FcRI) (IgG Fc receptor I) (CD64 antigen)
          Length = 374

 Score = 29.3 bits (64), Expect = 7.7
 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = +2

Query: 257 FFFWKANKGI--TRIYNKCTLHCENLSKNKYT 346
           FF W +N  I  T I +  T HC  + K++YT
Sbjct: 146 FFHWNSNLTILKTNISHNGTYHCSGMGKHRYT 177


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,762,857
Number of Sequences: 219361
Number of extensions: 1315473
Number of successful extensions: 2437
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2437
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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