| Clone Name | baal7n19 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid) | 31 | 1.0 | 2 | COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor | 28 | 5.2 | 3 | COAA1_HUMAN (Q03692) Collagen alpha-1(X) chain precursor | 28 | 5.2 | 4 | IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase i... | 28 | 8.9 |
|---|
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 30.8 bits (68), Expect = 1.0 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = +1 Query: 13 ARGDSDPPGRPGHGSPLARERRLFPH 90 A G PPG PG G+ L ++ +FPH Sbjct: 1753 APGGYGPPGMPGGGAQLVKKELIFPH 1778
>COAA1_MOUSE (Q05306) Collagen alpha-1(X) chain precursor| Length = 680 Score = 28.5 bits (62), Expect = 5.2 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 Query: 19 GDSDPPGRPGHGSP 60 G S PPG+PG+GSP Sbjct: 75 GPSGPPGKPGYGSP 88
>COAA1_HUMAN (Q03692) Collagen alpha-1(X) chain precursor| Length = 680 Score = 28.5 bits (62), Expect = 5.2 Identities = 10/14 (71%), Positives = 12/14 (85%) Frame = +1 Query: 19 GDSDPPGRPGHGSP 60 G S PPG+PG+GSP Sbjct: 75 GPSGPPGKPGYGSP 88
>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1| precursor Length = 102 Score = 27.7 bits (60), Expect = 8.9 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%) Frame = +2 Query: 92 CCNNCR-SFSGVDVCDD 139 CC NC SFSG+ CDD Sbjct: 46 CCTNCNFSFSGLYTCDD 62 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.143 0.469 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 22,323,664 Number of Sequences: 219361 Number of extensions: 329392 Number of successful extensions: 1172 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 974 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1172 length of database: 80,573,946 effective HSP length: 32 effective length of database: 73,554,394 effective search space used: 1765305456 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)