ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal8c13 |
|---|---|
| Clone Library Name | barley_pub |
>FDH_HORVU (Q9ZRI8) Formate dehydrogenase, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) Length = 377 Score = 294 bits (753), Expect = 1e-79 Identities = 146/156 (93%), Positives = 147/156 (94%) Frame = +1 Query: 91 MAAMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGIRD 270 MAAMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGIRD Sbjct: 1 MAAMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGIRD 60 Query: 271 WLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAG 450 WLESKGHHYIVTDDKEG NSELEKHIEDMHVLITTPFHPAYVTAE+IKKAK ELLLTAG Sbjct: 61 WLESKGHHYIVTDDKEGFNSELEKHIEDMHVLITTPFHPAYVTAEKIKKAKTPELLLTAG 120 Query: 451 IGSDHIDLPXXXXXGLTVAEVTGSNTVSVAEDELMR 558 IGSDHIDLP GLTVA VTGSNTVSVAEDELMR Sbjct: 121 IGSDHIDLPAAAAAGLTVARVTGSNTVSVAEDELMR 156
>FDH1_ORYSA (Q9SXP2) Formate dehydrogenase 1, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase 1) (FDH 1) Length = 376 Score = 285 bits (728), Expect = 8e-77 Identities = 140/154 (90%), Positives = 145/154 (94%) Frame = +1 Query: 97 AMWRAAARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGIRDWL 276 AMWRAAA L+ RA+GSRAAHTSAGSKKIVGVFY+ GEYADKNPNFVGCVEGALGIR+WL Sbjct: 2 AMWRAAAGHLLGRALGSRAAHTSAGSKKIVGVFYKGGEYADKNPNFVGCVEGALGIREWL 61 Query: 277 ESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIG 456 ESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYV+AERIKKAKNLELLLTAGIG Sbjct: 62 ESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVSAERIKKAKNLELLLTAGIG 121 Query: 457 SDHIDLPXXXXXGLTVAEVTGSNTVSVAEDELMR 558 SDHIDLP GLTVAEVTGSNTVSVAEDELMR Sbjct: 122 SDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMR 155
>FDH2_ORYSA (Q67U69) Formate dehydrogenase 2, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase 2) (FDH 2) Length = 378 Score = 260 bits (664), Expect = 2e-69 Identities = 128/156 (82%), Positives = 138/156 (88%), Gaps = 2/156 (1%) Frame = +1 Query: 97 AMWRA--AARQLVDRAVGSRAAHTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGIRD 270 AMWRA AA QL+ RA+ S AA TSAGSKK+VGVFY+ GEYADKNPNFVGCV+ ALGIR Sbjct: 2 AMWRAPSAAGQLLGRALASTAAQTSAGSKKVVGVFYKGGEYADKNPNFVGCVDSALGIRG 61 Query: 271 WLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAG 450 WLESKGH YIVTDDKEG+N ELEKHIED HVLITTPFHPAY+TAERIKKAKNLELLLTAG Sbjct: 62 WLESKGHRYIVTDDKEGINCELEKHIEDAHVLITTPFHPAYITAERIKKAKNLELLLTAG 121 Query: 451 IGSDHIDLPXXXXXGLTVAEVTGSNTVSVAEDELMR 558 +GSDHIDLP GLTVAE+TGSNTVSVAED+LMR Sbjct: 122 VGSDHIDLPAAAAAGLTVAEITGSNTVSVAEDQLMR 157
>FDH_ARATH (Q9S7E4) Formate dehydrogenase, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) Length = 384 Score = 221 bits (564), Expect = 8e-58 Identities = 109/133 (81%), Positives = 117/133 (87%) Frame = +1 Query: 160 TSAGSKKIVGVFYQAGEYADKNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGLNSELE 339 +S SKKIVGVFY+A EYA KNPNF+GCVE ALGIRDWLES+GH YIVTDDKEG + ELE Sbjct: 31 SSGDSKKIVGVFYKANEYATKNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELE 90 Query: 340 KHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTG 519 KHI D+HVLI+TPFHPAYVTAERIKKAKNL+LLLTAGIGSDHIDL GLTVAEVTG Sbjct: 91 KHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTG 150 Query: 520 SNTVSVAEDELMR 558 SN VSVAEDELMR Sbjct: 151 SNVVSVAEDELMR 163
>FDH_SOLTU (Q07511) Formate dehydrogenase, mitochondrial precursor (EC| 1.2.1.2) (NAD-dependent formate dehydrogenase) (FDH) Length = 381 Score = 221 bits (564), Expect = 8e-58 Identities = 112/160 (70%), Positives = 128/160 (80%), Gaps = 2/160 (1%) Frame = +1 Query: 85 VSMAAMWRAAARQLVDRA--VGSRAAHTSAGSKKIVGVFYQAGEYADKNPNFVGCVEGAL 258 ++M+ + AAR + + V +R S G KKIVGVFY+A EYA+ NPNF+GC E AL Sbjct: 1 MAMSRVASTAARAITSPSSLVFTRELQASPGPKKIVGVFYKANEYAEMNPNFLGCAENAL 60 Query: 259 GIRDWLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELL 438 GIR+WLESKGH YIVT DKEG + ELEKHI D+HVLI+TPFHPAYVTAERIKKAKNL+LL Sbjct: 61 GIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLL 120 Query: 439 LTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAEDELMR 558 LTAGIGSDH+DL GLTVAEVTGSNTVSVAEDELMR Sbjct: 121 LTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMR 160
>FDH_PICAN (P33677) Formate dehydrogenase (EC 1.2.1.2) (NAD-dependent formate| dehydrogenase) (FDH) Length = 361 Score = 150 bits (380), Expect = 2e-36 Identities = 76/128 (59%), Positives = 91/128 (71%), Gaps = 2/128 (1%) Frame = +1 Query: 178 KIVGVFYQAGEYADKNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHIEDM 357 K+V V Y AG++A GC E ALGIRDWLE +GH +VT DKEG NS LEK+I D Sbjct: 1 KVVLVLYDAGKHAQDEERLYGCTENALGIRDWLEKQGHDVVVTSDKEGQNSVLEKNISDA 60 Query: 358 HVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXG--LTVAEVTGSNTV 531 V+I+TPFHPAY+T ERI KAK L+LL+ AG+GSDHIDL G ++V EVTGSN V Sbjct: 61 DVIISTPFHPAYITKERIDKAKKLKLLVVAGVGSDHIDLDYINQSGRDISVLEVTGSNVV 120 Query: 532 SVAEDELM 555 SVAE +M Sbjct: 121 SVAEHVVM 128
>FDH_NEUCR (Q07103) Formate dehydrogenase (EC 1.2.1.2) (NAD-dependent formate| dehydrogenase) (FDH) Length = 375 Score = 141 bits (355), Expect = 1e-33 Identities = 66/128 (51%), Positives = 90/128 (70%), Gaps = 2/128 (1%) Frame = +1 Query: 178 KIVGVFYQAGEYADKNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHIEDM 357 K++ V Y G++ ++ P +G ++ LG+R WLE +GH + T DK+G NS +K +ED Sbjct: 3 KVLAVLYDGGKHGEEVPELLGTIQNELGLRKWLEDQGHTLVTTCDKDGENSTFDKELEDA 62 Query: 358 HVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXX--XXXGLTVAEVTGSNTV 531 ++ITTPFHP Y+TAER+ +AK L+L +TAGIGSDH+DL G+TVAEVTGSN V Sbjct: 63 EIIITTPFHPGYLTAERLARAKKLKLAVTAGIGSDHVDLNAANKTNGGITVAEVTGSNVV 122 Query: 532 SVAEDELM 555 SVAE LM Sbjct: 123 SVAEHVLM 130
>FDH_EMENI (Q03134) Probable formate dehydrogenase (EC 1.2.1.2) (NAD-dependent| formate dehydrogenase) (FDH) Length = 377 Score = 139 bits (351), Expect = 4e-33 Identities = 68/124 (54%), Positives = 84/124 (67%), Gaps = 2/124 (1%) Frame = +1 Query: 190 VFYQAGEYADKNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHIEDMHVLI 369 V Y G +A P +G E LGIR W+E +GH + T DK+G NS +K + D V+I Sbjct: 2 VLYDGGSHAKDQPGLLGTTENELGIRKWIEEQGHTLVTTSDKDGENSTFDKELVDAEVII 61 Query: 370 TTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXX--XXXGLTVAEVTGSNTVSVAE 543 TTPFHP Y+TAER+ KAKNL+L +TAGIGSDH+DL G+TVAEVTGSN VSVAE Sbjct: 62 TTPFHPGYLTAERLAKAKNLKLAVTAGIGSDHVDLDAANKTNGGITVAEVTGSNVVSVAE 121 Query: 544 DELM 555 +M Sbjct: 122 HVVM 125
>FDH2_YEAST (Q08987) Formate dehydrogenase 2 (EC 1.2.1.2) (NAD-dependent| formate dehydrogenase 2) Length = 376 Score = 119 bits (298), Expect = 6e-27 Identities = 55/123 (44%), Positives = 86/123 (69%), Gaps = 1/123 (0%) Frame = +1 Query: 178 KIVGVFYQAGEYADKNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGL-NSELEKHIED 354 K++ V Y+ G++A++ +GC+E LGIR+++E +G+ + T DK+ S +++ ++D Sbjct: 5 KVLLVLYEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKD 64 Query: 355 MHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVS 534 ++ITTPF PAY++ RI +A NL+L +TAG+GSDH+DL +TV EVTGSN VS Sbjct: 65 AEIVITTPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVS 124 Query: 535 VAE 543 VAE Sbjct: 125 VAE 127
>FDH1_YEAST (Q08911) Formate dehydrogenase 1 (EC 1.2.1.2) (NAD-dependent| formate dehydrogenase 1) Length = 376 Score = 119 bits (298), Expect = 6e-27 Identities = 55/123 (44%), Positives = 86/123 (69%), Gaps = 1/123 (0%) Frame = +1 Query: 178 KIVGVFYQAGEYADKNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGL-NSELEKHIED 354 K++ V Y+ G++A++ +GC+E LGIR+++E +G+ + T DK+ S +++ ++D Sbjct: 5 KVLLVLYEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKD 64 Query: 355 MHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVS 534 ++ITTPF PAY++ RI +A NL+L +TAG+GSDH+DL +TV EVTGSN VS Sbjct: 65 AEIVITTPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVS 124 Query: 535 VAE 543 VAE Sbjct: 125 VAE 127
>FDH_PSESR (P33160) Formate dehydrogenase (EC 1.2.1.2) (NAD-dependent formate| dehydrogenase) (FDH) Length = 400 Score = 117 bits (293), Expect = 2e-26 Identities = 59/107 (55%), Positives = 76/107 (71%) Frame = +1 Query: 235 VGCVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVTAERIK 414 +G V G LG+R +LES GH +VT DK+G +S E+ + D V+I+ PF PAY+T ERI Sbjct: 50 LGSVSGELGLRKYLESNGHTLVVTSDKDGPDSVFERELVDADVVISQPFWPAYLTPERIA 109 Query: 415 KAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAEDELM 555 KAKNL+L LTAGIGSDH+DL +TVAEVT N++SVAE +M Sbjct: 110 KAKNLKLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVM 156
>SERA_ARCFU (O29445) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 527 Score = 47.8 bits (112), Expect = 2e-05 Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 7/84 (8%) Frame = +1 Query: 313 KEGLNSELEKHIEDMHVLITTPFHPAYVT-------AERIKKAKNLELLLTAGIGSDHID 471 K GL E++ + ++ P + A V AE I+ AKNL+++ AG+G D+ID Sbjct: 19 KNGLEVEVKTGMSREELIREVPKYEAIVVRSQTKVDAEVIQAAKNLKIIGRAGVGVDNID 78 Query: 472 LPXXXXXGLTVAEVTGSNTVSVAE 543 + G+ V G NT+S AE Sbjct: 79 INAATQRGIVVVNAPGGNTISTAE 102
>SERA_METJA (Q58424) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 524 Score = 41.6 bits (96), Expect = 0.002 Identities = 24/71 (33%), Positives = 41/71 (57%) Frame = +1 Query: 331 ELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAE 510 EL + I+D VL+ VT + I+KA+ L+++ AG+G D+ID+ G+ V Sbjct: 34 ELLEKIKDADVLVVRS--GTKVTRDVIEKAEKLKVIGRAGVGVDNIDVEAATEKGIIVVN 91 Query: 511 VTGSNTVSVAE 543 ++++SVAE Sbjct: 92 APDASSISVAE 102
>SERA_SYNY3 (P73821) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 554 Score = 38.1 bits (87), Expect = 0.017 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +1 Query: 394 VTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAEDEL 552 VT + I+ L+++ AG+G D+ID+P G+ V NT++ AE L Sbjct: 81 VTEKIIQAGSQLKIIGRAGVGVDNIDVPAATRQGIVVVNSPEGNTIAAAEHAL 133
>SERA_PONPY (Q5R7M2) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 37.7 bits (86), Expect = 0.022 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +1 Query: 310 DKEGLNSE-LEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXX 486 +K+ L+ E L ++D LI VTA+ I A+ L+++ AG G D++DL Sbjct: 31 EKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEAAT 88 Query: 487 XXGLTVAEVTGSNTVSVAE 543 G+ V N++S AE Sbjct: 89 RKGILVMNTPNGNSLSAAE 107
>SERA_MOUSE (Q61753) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| (A10) Length = 532 Score = 37.7 bits (86), Expect = 0.022 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +1 Query: 310 DKEGLNSE-LEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXX 486 +K+ L+ E L ++D LI VTA+ I A+ L+++ AG G D++DL Sbjct: 31 EKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEAAT 88 Query: 487 XXGLTVAEVTGSNTVSVAE 543 G+ V N++S AE Sbjct: 89 RKGILVMNTPNGNSLSAAE 107
>SERA_HUMAN (O43175) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 37.7 bits (86), Expect = 0.022 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +1 Query: 310 DKEGLNSE-LEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXX 486 +K+ L+ E L ++D LI VTA+ I A+ L+++ AG G D++DL Sbjct: 31 EKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEAAT 88 Query: 487 XXGLTVAEVTGSNTVSVAE 543 G+ V N++S AE Sbjct: 89 RKGILVMNTPNGNSLSAAE 107
>SERA_RAT (O08651) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 37.4 bits (85), Expect = 0.029 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +1 Query: 310 DKEGLNSE-LEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXX 486 +K+ L+ E L ++D LI VTA+ I A+ L+++ AG G D++DL Sbjct: 31 EKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEAAT 88 Query: 487 XXGLTVAEVTGSNTVSVAE 543 G+ V N++S AE Sbjct: 89 RKGVLVMNTPNGNSLSAAE 107
>SERA_MACFA (Q60HD7) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (3-PGDH)| Length = 532 Score = 37.4 bits (85), Expect = 0.029 Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%) Frame = +1 Query: 310 DKEGLNSE-LEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXX 486 +K+ L+ E L ++D LI VTA+ I A+ L+++ AG G D++DL Sbjct: 31 EKQNLSKEELIAELQDCEGLIVRS--ATKVTADVINAAEKLQVVGRAGTGVDNVDLEAAT 88 Query: 487 XXGLTVAEVTGSNTVSVAE 543 G+ V N++S AE Sbjct: 89 RKGVLVMNTPNGNSLSAAE 107
>SERA_METTH (O27051) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 525 Score = 37.4 bits (85), Expect = 0.029 Identities = 17/53 (32%), Positives = 30/53 (56%) Frame = +1 Query: 394 VTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAEDEL 552 VT E I+ A L+++ AG+G D++D+ G+ V S +++VAE + Sbjct: 55 VTREVIEAAPRLKIIARAGVGVDNVDVKAATDRGIMVINAPESTSITVAEHSI 107
>PDXB_VIBPA (Q87MN8) Erythronate-4-phosphate dehydrogenase (EC 1.1.1.-)| Length = 377 Score = 36.2 bits (82), Expect = 0.064 Identities = 20/50 (40%), Positives = 24/50 (48%) Frame = +1 Query: 394 VTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 V AE I KA L+ + TA G DH+D G+ G N V VAE Sbjct: 49 VNAELISKANKLKFVGTATAGMDHVDQALLKEKGIFFTAAPGCNKVGVAE 98
>SERA_HAEIN (P43885) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 410 Score = 36.2 bits (82), Expect = 0.064 Identities = 33/104 (31%), Positives = 49/104 (47%) Frame = +1 Query: 232 FVGCVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVTAERI 411 F G + AL D L + G+ I K EL++ I+D+H + ++TAE I Sbjct: 17 FEGVHQSAL---DTLHAAGYTNIDYYKKALDGDELKEAIKDVHFIGLRS--RTHLTAEMI 71 Query: 412 KKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 + A L + IG++ +DL G+ V SNT SVAE Sbjct: 72 EAAPKLIAVGCFCIGTNQVDLNAAKARGIPVFNAPFSNTRSVAE 115
>PDXB_PHOPR (Q6LNU2) Erythronate-4-phosphate dehydrogenase (EC 1.1.1.-)| Length = 391 Score = 36.2 bits (82), Expect = 0.064 Identities = 18/45 (40%), Positives = 22/45 (48%) Frame = +1 Query: 409 IKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 I KA L+ + TA G DH+D G+T G N V VAE Sbjct: 54 ISKANKLQFVGTATAGQDHVDQALLAERGITFTSAPGCNKVGVAE 98
>SERA_BACSU (P35136) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 525 Score = 36.2 bits (82), Expect = 0.064 Identities = 17/50 (34%), Positives = 27/50 (54%) Frame = +1 Query: 394 VTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 VT + K +L+++ AG+G D+ID+ G+ V NT+S AE Sbjct: 52 VTEDLFNKMTSLKIVGRAGVGVDNIDIDEATKHGVIVINAPNGNTISTAE 101
>PDXB_VIBVY (Q7MIT6) Erythronate-4-phosphate dehydrogenase (EC 1.1.1.-)| Length = 377 Score = 33.9 bits (76), Expect = 0.32 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = +1 Query: 394 VTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 V A I KA L+ + TA G DH+D G+ G N V VAE Sbjct: 49 VNAALISKASKLKFVGTATAGMDHVDQALLKEKGIYFTAAPGCNKVGVAE 98
>PDXB_VIBVU (Q8DB36) Erythronate-4-phosphate dehydrogenase (EC 1.1.1.-)| Length = 377 Score = 33.9 bits (76), Expect = 0.32 Identities = 19/50 (38%), Positives = 23/50 (46%) Frame = +1 Query: 394 VTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 V A I KA L+ + TA G DH+D G+ G N V VAE Sbjct: 49 VNAALISKANKLKFVGTATAGMDHVDQALLKEKGIYFTAAPGCNKVGVAE 98
>SERA_ARATH (O04130) D-3-phosphoglycerate dehydrogenase, chloroplast precursor| (EC 1.1.1.95) (3-PGDH) Length = 624 Score = 33.9 bits (76), Expect = 0.32 Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%) Frame = +1 Query: 331 ELEKHIEDMHVLITTPFHPAYVTAERIKKAKN-LELLLTAGIGSDHIDLPXXXXXGLTVA 507 +L+K + + LI VT E + AK L+++ AG+G D++DL G V Sbjct: 115 DLKKKVAESDALIVRS--GTKVTREVFEAAKGRLKVVGRAGVGIDNVDLQAATEHGCLVV 172 Query: 508 EVTGSNTVSVAE 543 +NTV+ AE Sbjct: 173 NAPTANTVAAAE 184
>PDXB_SHEON (Q8ECR2) Erythronate-4-phosphate dehydrogenase (EC 1.1.1.-)| Length = 376 Score = 33.5 bits (75), Expect = 0.41 Identities = 18/68 (26%), Positives = 33/68 (48%) Frame = +1 Query: 340 KHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTG 519 + ++D VL+ V A ++ + L+ + +A IG+DH+DL G+ + G Sbjct: 33 EQVQDADVLLVRSV--TRVNAALLEANQKLKFVGSATIGTDHVDLAYLATRGIVFSNAPG 90 Query: 520 SNTVSVAE 543 N +V E Sbjct: 91 CNATAVGE 98
>AKSF_METJA (Q58991) Threo-isocitrate dehydrogenase [NAD] (EC 1.1.1.-)| Length = 347 Score = 33.1 bits (74), Expect = 0.54 Identities = 39/122 (31%), Positives = 52/122 (42%), Gaps = 11/122 (9%) Frame = +1 Query: 130 DRAVGSRAAHTSAGSKKIVGVFYQAGEYADKNPNF-VGCVEGA--LGIRDWL------ES 282 D A+ R T GS++I+ + EYA KN V C+ A L I D L E Sbjct: 144 DTAIAERVI-TRKGSERIIRFAF---EYAIKNNRKKVSCIHKANVLRITDGLFLEVFNEI 199 Query: 283 KGHHYIVTDDK--EGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIG 456 K H+ I DD + L KH E V++TT ++ E L L +A IG Sbjct: 200 KKHYNIEADDYLVDSTAMNLIKHPEKFDVIVTTNMFGDILSDEASALIGGLGLAPSANIG 259 Query: 457 SD 462 D Sbjct: 260 DD 261
>Y1556_HAEIN (P45250) Putative 2-hydroxyacid dehydrogenase HI1556 (EC 1.-.-.-)| Length = 315 Score = 31.6 bits (70), Expect = 1.6 Identities = 16/68 (23%), Positives = 35/68 (51%) Frame = +1 Query: 340 KHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTG 519 + ++D ++IT+ E +++ L+L+ G++++DL G+ V VTG Sbjct: 39 ERVKDADIVITSK---VIFDRETLQQLPKLKLIAITATGTNNVDLVAAEEMGIAVRNVTG 95 Query: 520 SNTVSVAE 543 ++ +V E Sbjct: 96 YSSTTVPE 103
>SERA_YEAST (P40054) D-3-phosphoglycerate dehydrogenase 1 (EC 1.1.1.95) (3-PGDH| 1) Length = 469 Score = 31.6 bits (70), Expect = 1.6 Identities = 22/71 (30%), Positives = 36/71 (50%) Frame = +1 Query: 331 ELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAE 510 EL + I+D+H + +T+ ++ AKNL + IG++ +DL G+ V Sbjct: 93 ELIEKIKDVHAIGIRS--KTRLTSNVLQHAKNLVCIGCFCIGTNQVDLDYATSRGIAVFN 150 Query: 511 VTGSNTVSVAE 543 SN+ SVAE Sbjct: 151 SPFSNSRSVAE 161
>PDXB_BACTN (Q8A2E4) Erythronate-4-phosphate dehydrogenase (EC 1.1.1.-)| Length = 348 Score = 31.2 bits (69), Expect = 2.1 Identities = 15/43 (34%), Positives = 22/43 (51%) Frame = +1 Query: 415 KAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 + ++ + TA IG DHID G+ A G N+ SVA+ Sbjct: 56 EGSKVKFIATATIGFDHIDTEYCKQAGIEWANAPGCNSASVAQ 98
>PDXB_VIBCH (Q9KQ92) Erythronate-4-phosphate dehydrogenase (EC 1.1.1.-)| Length = 381 Score = 30.8 bits (68), Expect = 2.7 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +1 Query: 409 IKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 + KA L+ + TA G DH+D G+ G N V VAE Sbjct: 54 LAKANRLKFVGTATAGMDHVDQALLRERGIFFTAAPGCNKVGVAE 98
>SER33_YEAST (P40510) D-3-phosphoglycerate dehydrogenase 2 (EC 1.1.1.95) (3-PGDH| 2) Length = 469 Score = 30.8 bits (68), Expect = 2.7 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 1/88 (1%) Frame = +1 Query: 283 KGHHYIVTDDKEGL-NSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGS 459 K Y V K L EL + I+D+H + +T + ++ A+NL + IG+ Sbjct: 76 KDQGYQVEFHKSSLPEDELIEKIKDVHAIGIRS--KTRLTEKILQHARNLVCIGCFCIGT 133 Query: 460 DHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 + +DL G+ V SN+ SVAE Sbjct: 134 NQVDLKYAASKGIAVFNSPFSNSRSVAE 161
>SERA_SHIFL (P0A9T3) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 409 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +1 Query: 325 NSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTV 504 + +L++ I D H + ++T + I A+ L + IG++ +DL G+ V Sbjct: 43 DEQLKESIRDAHFIGLRS--RTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPV 100 Query: 505 AEVTGSNTVSVAE 543 SNT SVAE Sbjct: 101 FNAPFSNTRSVAE 113
>SERA_ECOLI (P0A9T0) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 409 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +1 Query: 325 NSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTV 504 + +L++ I D H + ++T + I A+ L + IG++ +DL G+ V Sbjct: 43 DEQLKESIRDAHFIGLRS--RTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPV 100 Query: 505 AEVTGSNTVSVAE 543 SNT SVAE Sbjct: 101 FNAPFSNTRSVAE 113
>SERA_ECOL6 (P0A9T1) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 409 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +1 Query: 325 NSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTV 504 + +L++ I D H + ++T + I A+ L + IG++ +DL G+ V Sbjct: 43 DEQLKESIRDAHFIGLRS--RTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPV 100 Query: 505 AEVTGSNTVSVAE 543 SNT SVAE Sbjct: 101 FNAPFSNTRSVAE 113
>SERA_ECO57 (P0A9T2) D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) (PGDH)| Length = 409 Score = 30.4 bits (67), Expect = 3.5 Identities = 21/73 (28%), Positives = 35/73 (47%) Frame = +1 Query: 325 NSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTV 504 + +L++ I D H + ++T + I A+ L + IG++ +DL G+ V Sbjct: 43 DEQLKESIRDAHFIGLRS--RTHLTEDVINAAEKLVAIGCFCIGTNQVDLDAAAKRGIPV 100 Query: 505 AEVTGSNTVSVAE 543 SNT SVAE Sbjct: 101 FNAPFSNTRSVAE 113
>DHGY_HYPME (P36234) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent| hydroxypyruvate reductase) (HPR) (GDH) (Hydroxypyruvate dehydrogenase) (Glyoxylate reductase) Length = 321 Score = 30.4 bits (67), Expect = 3.5 Identities = 15/41 (36%), Positives = 21/41 (51%) Frame = +1 Query: 421 KNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 +N++ + T IG DHIDL G+ V TV+ AE Sbjct: 67 ENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAE 107
>PDXB_PHOLL (Q7N2B2) Erythronate-4-phosphate dehydrogenase (EC 1.1.1.-)| Length = 375 Score = 30.4 bits (67), Expect = 3.5 Identities = 13/47 (27%), Positives = 24/47 (51%) Frame = +1 Query: 403 ERIKKAKNLELLLTAGIGSDHIDLPXXXXXGLTVAEVTGSNTVSVAE 543 E + K + ++ + TA G+DH+D G+ + G N ++V E Sbjct: 51 EELLKGRAVKFIGTATAGTDHVDQSWLSQAGIGFSAAPGCNAIAVVE 97
>MOAB_STAAW (Q8NV99) Molybdenum cofactor biosynthesis protein B| Length = 168 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +1 Query: 241 CVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHI-EDMHVLITT 375 CV L D S H+ IV D+K + ++++K + ED+ V+ITT Sbjct: 34 CVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITT 79
>MOAB_STAAS (Q6G747) Molybdenum cofactor biosynthesis protein B| Length = 168 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +1 Query: 241 CVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHI-EDMHVLITT 375 CV L D S H+ IV D+K + ++++K + ED+ V+ITT Sbjct: 34 CVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITT 79
>MOAB_STAAN (P99137) Molybdenum cofactor biosynthesis protein B| Length = 168 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +1 Query: 241 CVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHI-EDMHVLITT 375 CV L D S H+ IV D+K + ++++K + ED+ V+ITT Sbjct: 34 CVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITT 79
>MOAB_STAAM (P65406) Molybdenum cofactor biosynthesis protein B| Length = 168 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +1 Query: 241 CVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHI-EDMHVLITT 375 CV L D S H+ IV D+K + ++++K + ED+ V+ITT Sbjct: 34 CVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITT 79
>MOAB_STAAC (Q5HDT2) Molybdenum cofactor biosynthesis protein B| Length = 168 Score = 30.4 bits (67), Expect = 3.5 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%) Frame = +1 Query: 241 CVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHI-EDMHVLITT 375 CV L D S H+ IV D+K + ++++K + ED+ V+ITT Sbjct: 34 CVRQLLQADDVEVSDAHYTIVKDEKVAITTQVKKWLEEDIDVIITT 79
>E2AK3_DROME (Q9NIV1) Eukaryotic translation initiation factor 2-alpha kinase| precursor (EC 2.7.11.1) (PRKR-like endoplasmic reticulum kinase) (PERK) (PEK) (DmPEK) Length = 1162 Score = 30.0 bits (66), Expect = 4.6 Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 1/98 (1%) Frame = +1 Query: 187 GVFYQAGEYAD-KNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHIEDMHV 363 G Q GE + NF + L +++ G ++ T D G ++ Sbjct: 436 GAVAQGGELVPYDDENFAVAAQSVLNASEFVNGNGFYFYTTGDLNGPQECSTQNNPTDLP 495 Query: 364 LITTPFHPAYVTAERIKKAKNLELLLTAGIGSDHIDLP 477 IT P P T+E + N + G D ID P Sbjct: 496 AITAPTSPTNATSEGTEATGNHSVNDDLGFSLDDIDAP 533
>TCPE_ARATH (O04450) T-complex protein 1 subunit epsilon (TCP-1-epsilon)| (CCT-epsilon) Length = 535 Score = 29.6 bits (65), Expect = 6.0 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%) Frame = +1 Query: 244 VEGALGIRDWLESKGHHYIVTDDKEGLNSELEKHIEDMHV-LITTPFHP 387 VEG +G + LE Y + DK+ + ++ K IED H+ ++T PF P Sbjct: 207 VEGKVGGK--LEDTELIYGILIDKDMSHPQMPKQIEDAHIAILTCPFEP 253
>MIA40_CANGA (Q6FW26) Intermembrane space import and assembly protein 40,| mitochondrial precursor (Mitochondrial import inner membrane translocase TIM40) Length = 404 Score = 29.6 bits (65), Expect = 6.0 Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 5/74 (6%) Frame = +1 Query: 211 YADKNPNFVGCVEGALGIRDWLESKGHHYI--VTDDKEGLNSELEKHI---EDMHVLITT 375 Y++ P + CVE ++D HY + D + N + EK++ +D V T Sbjct: 315 YSEAEPKGIDCVEKFQHMQDCFRRYPEHYAEQLADPADDENVDHEKNLSEGKDTGVDSTP 374 Query: 376 PFHPAYVTAERIKK 417 P AY+ E+ KK Sbjct: 375 PKDEAYLKTEKEKK 388
>ARCB_HAEIN (P44578) Aerobic respiration control sensor protein arcB homolog| (EC 2.7.13.3) Length = 325 Score = 29.6 bits (65), Expect = 6.0 Identities = 16/57 (28%), Positives = 29/57 (50%) Frame = +1 Query: 289 HHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAGIGS 459 +H+IV D G++ E +KHI +M+ + + + + +KNL L+ G S Sbjct: 269 YHFIVKDTGMGISPEEQKHIFEMYYQVKESRQQSAGSGIGLAISKNLAQLMGRGFNS 325
>Y169_METJA (Q57633) Hypothetical ATP-binding protein MJ0169| Length = 263 Score = 29.6 bits (65), Expect = 6.0 Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 7/95 (7%) Frame = +1 Query: 295 YIVTDDKEGLNSELEKH--IEDMHVLITTPFHPAYVTAERIKKAKNLELLLTAG-----I 453 Y++ D GLN E+ H I D +L+ TP + + A R+K++ + G + Sbjct: 114 YVIIDAPAGLNREMATHLAIADKLLLVVTPEMFSIIDAVRLKESAEMAGTPLMGVVLNRV 173 Query: 454 GSDHIDLPXXXXXGLTVAEVTGSNTVSVAEDELMR 558 G D ++ L + G V V EDE +R Sbjct: 174 GRDFGEMGRDEIEML----IKGKVLVEVPEDENVR 204
>NHR6_CAEEL (P41829) Nuclear hormone receptor family member nhr-6 (Cnr8)| Length = 619 Score = 29.3 bits (64), Expect = 7.8 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%) Frame = -2 Query: 251 PSTQPTKLGFLSAY-SPAW*NTPTIFLLPADVCAALDPTARSTSCLAAALHIAAMETEGS 75 P++ P GFL ++ +P +TPT F +P++ D + A LH A EG Sbjct: 229 PTSPPQLQGFLRSFLNPDNLSTPTSFGVPSETALDADKMCAVCNDRAVCLHYGARTCEGC 288 Query: 74 R 72 + Sbjct: 289 K 289 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.317 0.133 0.388 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 70,922,260 Number of Sequences: 219361 Number of extensions: 1416670 Number of successful extensions: 4843 Number of sequences better than 10.0: 51 Number of HSP's better than 10.0 without gapping: 4630 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4831 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4528412720 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
