ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7n08 |
|---|---|
| Clone Library Name | barley_pub |
>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds Length = 1709 Score = 1057 bits (533), Expect = 0.0 Identities = 556/561 (99%), Gaps = 2/561 (0%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 204 gaagaagctcaag-aagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 262 Query: 61 ccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 263 ccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagt 322 Query: 121 ggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggca 180 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 323 ggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagagggaagggca 382 Query: 181 tcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagct 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 383 tcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagct 442 Query: 241 cctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 443 cctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggct 502 Query: 301 tctacatcgctcctgctttcatggacaagcttgttgtccatctctcc-aaaacttcatga 359 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 503 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatga 562 Query: 360 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 563 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 622 Query: 420 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 682 Query: 480 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 539 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 683 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 742 Query: 540 gtgaggctgcagacatgatca 560 ||||||||||||||||||||| Sbjct: 743 gtgaggctgcagacatgatca 763
>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA Length = 1643 Score = 969 bits (489), Expect = 0.0 Identities = 545/561 (97%), Gaps = 2/561 (0%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 124 gaagaagctcaag-aagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 182 Query: 61 ccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagt 120 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 183 ccaacaggttcacggtcatggcagcggaaaacatcgacgagaagaggaacaccgacaagt 242 Query: 121 ggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 ggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggca 302 Query: 181 tcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagct 240 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 303 tcgtggactccctcttccaggcgcccactggcgacggcacccacgaggccgtcctcagct 362 Query: 241 cctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggct 300 | |||||||||||||||||||| || |||||||||||||||||||||||||||||||| Sbjct: 363 catacgagtacgtcagccagggactcaagaagtacgacttcgacaacaccatgggaggct 422 Query: 301 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatga 359 ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct: 423 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaagaacttcatga 482 Query: 360 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 419 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 483 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 542 Query: 420 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 479 |||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| Sbjct: 543 aatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatgatgagtg 602 Query: 480 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 539 ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| Sbjct: 603 ccggagagctggagagtggcaacgccggagagccagccaagctcatcaggcagcggtacc 662 Query: 540 gtgaggctgcagacatgatca 560 ||||||||||||||||||||| Sbjct: 663 gtgaggctgcagacatgatca 683
>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end Length = 1394 Score = 967 bits (488), Expect = 0.0 Identities = 504/508 (99%), Gaps = 1/508 (0%) Strand = Plus / Plus Query: 54 tccaaggccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacacc 113 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1 tccaaggccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacacc 60 Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct: 61 gacaagtggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagaggg 120 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 180 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 181 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 240 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctcc-aaaac 352 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct: 241 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaac 300 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 301 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 360 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 361 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 420 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 421 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 480 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||||||||||||||||||||||| Sbjct: 481 cggtaccgtgaggctgcagacatgatca 508
>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase activase (RcaB) gene, complete cds; and ribulose 1,5-bisphosphate carboxylase activase (RcaA) gene, alternatively spliced, complete cds Length = 8766 Score = 700 bits (353), Expect = 0.0 Identities = 373/377 (98%), Gaps = 2/377 (0%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5545 gaagaagctcaag-aagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 5603 Query: 61 ccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagt 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5604 ccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagt 5663 Query: 121 ggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5664 ggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggca 5723 Query: 181 tcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagct 240 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 5724 tcgtggactcgctcttccaggcgcccacggggcacggcacccacgaggccgtcctcagct 5783 Query: 241 cctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggct 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 5784 cctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggct 5843 Query: 301 tctacatcgctcctgctttcatggacaagcttgttgtccatctctcc-aaaacttcatga 359 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 5844 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatga 5903 Query: 360 ccctgcccaacatcaag 376 ||||||||||||||||| Sbjct: 5904 ccctgcccaacatcaag 5920 Score = 414 bits (209), Expect = e-112 Identities = 386/443 (87%), Gaps = 4/443 (0%) Strand = Plus / Plus Query: 119 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 178 |||||||||||| || ||||| ||||| |||||||||||||||||||| | ||||| || Sbjct: 2939 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 2998 Query: 179 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 238 |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| || Sbjct: 2999 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 3058 Query: 239 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 298 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 3059 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 3118 Query: 299 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 357 | |||||||| || || |||||||||||||| | ||||| ||| |||| |||||||| Sbjct: 3119 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 3178 Query: 358 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 417 ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || || Sbjct: 3179 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 3238 Query: 418 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 477 || || |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 3239 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 3298 Query: 478 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 537 ||||| ||||||||||| || ||| || ||||| |||||||| ||| ||||| |||| Sbjct: 3299 cgccggtgagctggagagcggcaac---ggcgagccggccaagctgatccggcagaggta 3355 Query: 538 ccgtgaggctgcagacatgatca 560 ||| ||||| || ||||| |||| Sbjct: 3356 ccgcgaggcggccgacattatca 3378 Score = 194 bits (98), Expect = 2e-46 Identities = 98/98 (100%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6408 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 6467 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatca 560 |||||||||||||||||||||||||||||||||||||| Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatca 6505 Score = 174 bits (88), Expect = 2e-40 Identities = 88/88 (100%) Strand = Plus / Plus Query: 375 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 6070 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 6129 Query: 435 agcttgtgttcgccaagatgggcatcaa 462 |||||||||||||||||||||||||||| Sbjct: 6130 agcttgtgttcgccaagatgggcatcaa 6157
>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1616 Score = 642 bits (324), Expect = 0.0 Identities = 418/448 (93%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || Sbjct: 257 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 316 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| ||||| ||||| || ||||||||||||| |||||| |||||||||||||||||| Sbjct: 317 aagggtatcgtcgactccctgttccaggcgcccatgggcgatggcacccacgaggccgtc 376 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 377 ctcagctcctacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 436 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||| Sbjct: 437 ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 496 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 497 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggt 556 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || || ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 557 caggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatg 616 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 617 atgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcag 676 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||| ||||| ||||||||||||| Sbjct: 677 cggtaccgcgaggccgcagacatgatca 704 Score = 115 bits (58), Expect = 2e-22 Identities = 74/78 (94%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 5 aagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaa 64 ||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 146 aagctcaag-aagcaggtgacctcggcagtgaactaccatggcaagagcttcaaggccaa 204 Query: 65 caggttcacagtcatggc 82 ||||||||| |||||||| Sbjct: 205 caggttcaccgtcatggc 222
>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1646 Score = 622 bits (314), Expect = e-175 Identities = 415/448 (92%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || Sbjct: 247 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 306 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| ||||| ||||| | ||||||||||||| |||||| || ||||||||||||||| Sbjct: 307 aagggtatcgtcgactccttgttccaggcgcccatgggcgatggnacccacgaggccgtc 366 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 367 ctcagctcntacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 426 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||| Sbjct: 427 ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 486 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 487 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggt 546 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || || ||||| ||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct: 547 caggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatg 606 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||| Sbjct: 607 atgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcag 666 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||| ||||| ||||||||||||| Sbjct: 667 cggtaccgcgaggccgcagacatgatca 694 Score = 115 bits (58), Expect = 2e-22 Identities = 74/78 (94%), Gaps = 1/78 (1%) Strand = Plus / Plus Query: 5 aagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaa 64 ||||||||| ||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 136 aagctcaag-aagcaggtgacctcggcagtgaactaccatggcaagagcttcaaggccaa 194 Query: 65 caggttcacagtcatggc 82 ||||||||| |||||||| Sbjct: 195 caggttcaccgtcatggc 212
>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate carboxylase activase large isoform precursor protein, complete cds, clone: 13YPR038 Length = 1558 Score = 539 bits (272), Expect = e-150 Identities = 405/448 (90%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 204 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 263 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 264 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 323 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 324 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 383 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 384 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 443 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 444 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 503 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 504 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 563 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 564 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 623 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||||||||| |||||||| |||| Sbjct: 624 cggtaccgtgaggcggcagacatcatca 651 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 89 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 147 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 148 tcaacaggttca 159
>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full insert sequence Length = 1680 Score = 539 bits (272), Expect = e-150 Identities = 405/448 (90%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 241 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 300 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 301 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 360 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 361 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 420 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 421 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 480 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 481 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 540 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 541 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 600 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 601 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 660 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||||||||| |||||||| |||| Sbjct: 661 cggtaccgtgaggcggcagacatcatca 688 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 126 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 184 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 185 tcaacaggttca 196
>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full insert sequence Length = 1691 Score = 539 bits (272), Expect = e-150 Identities = 405/448 (90%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 300 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 359 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 360 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 419 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 420 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 479 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 480 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 539 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 540 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 599 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 600 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 659 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||||||||| |||||||| |||| Sbjct: 660 cggtaccgtgaggcggcagacatcatca 687 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 125 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 183 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 184 tcaacaggttca 195
>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full insert sequence Length = 1470 Score = 539 bits (272), Expect = e-150 Identities = 405/448 (90%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 24 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 83 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 84 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 143 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 144 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 203 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 204 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 263 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 264 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 323 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 324 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 383 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 384 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 443 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||||||||| |||||||| |||| Sbjct: 444 cggtaccgtgaggcggcagacatcatca 471
>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform precursor, complete cds Length = 1706 Score = 539 bits (272), Expect = e-150 Identities = 405/448 (90%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 245 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 304 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 305 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 364 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 365 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 424 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 425 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 484 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 485 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 544 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 545 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 604 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 605 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 664 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||||||||| |||||||| |||| Sbjct: 665 cggtaccgtgaggcggcagacatcatca 692 Score = 75.8 bits (38), Expect = 1e-10 Identities = 53/58 (91%) Strand = Plus / Plus Query: 15 aagcaggtgacctcggccgtgaactaccatggcaagagctccaaggccaacaggttca 72 ||||||||||| ||||| |||||||||||||||||||||||||| ||||||||||| Sbjct: 143 aagcaggtgacatcggcggtgaactaccatggcaagagctccaacatcaacaggttca 200
>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform precursor, complete cds Length = 1623 Score = 539 bits (272), Expect = e-150 Identities = 405/448 (90%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 239 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 298 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 299 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 358 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 359 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 418 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 419 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 478 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 479 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 538 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 539 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 598 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 599 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 658 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||||||||| |||||||| |||| Sbjct: 659 cggtaccgtgaggcggcagacatcatca 686 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 124 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 182 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 183 tcaacaggttca 194
>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full insert sequence Length = 1721 Score = 531 bits (268), Expect = e-148 Identities = 404/448 (90%), Gaps = 1/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 252 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 311 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 312 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 371 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 372 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 431 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||| Sbjct: 432 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 491 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||| |||||||||||| ||||||||| | ||||||||||||||||||||||| Sbjct: 492 ttcatgaccctccccaacatcaaggtcccactcaccctgggtatctggggaggcaagggt 551 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 552 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 611 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||| Sbjct: 612 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 671 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||||||||| |||||||| |||| Sbjct: 672 cggtaccgtgaggcggcagacatcatca 699 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 137 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 195 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 196 tcaacaggttca 207
>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase (rca) mRNA, complete cds Length = 1675 Score = 519 bits (262), Expect = e-144 Identities = 403/448 (89%), Gaps = 4/448 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 212 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 271 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 272 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 331 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||||||| |||||||||| || | | |||||||||||||||||||||| Sbjct: 332 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 391 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 ||||||||||||||||| ||| |||||||||||||||| || ||||| ||||||| ||| Sbjct: 392 ggaggcttctacatcgccccttctttcatggacaagctcgtcgtccacatctccaagaac 451 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 ||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 452 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 511 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||| Sbjct: 512 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 571 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||||||||||||||| || ||| |||||||| |||||||| ||||||||| Sbjct: 572 atgagcgccggagagctggagagcggcaac---ggagagccggccaagctgatcaggcag 628 Query: 533 cggtaccgtgaggctgcagacatgatca 560 |||||||||||||| |||||||| |||| Sbjct: 629 cggtaccgtgaggcggcagacatcatca 656 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 97 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 155 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 156 tcaacaggttca 167
>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB) mRNA, complete cds; nuclear gene for chloroplast product Length = 1525 Score = 450 bits (227), Expect = e-123 Identities = 390/443 (88%), Gaps = 1/443 (0%) Strand = Plus / Plus Query: 119 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 178 |||||||||||| || ||||| |||||||| ||||||||||||||||| || ||||| || Sbjct: 217 gtggaagggtctcgcttacgacatctccgatgaccagcaggacatcacgagggggaaagg 276 Query: 179 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 238 |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| || Sbjct: 277 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctgag 336 Query: 239 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 298 ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 337 ctcctacgagtacatcagccagggcctgcgcaagtacgacttcgacaacaccatggacgg 396 Query: 299 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 357 | |||||||| || || |||||||||||||| | ||||| ||| |||| |||||||| Sbjct: 397 gctgtacatcgccccggcgttcatggacaagctcatcgtccacctcgccaagaacttcat 456 Query: 358 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 417 ||| || |||||||||||| |||| |||||| |||||||||||||||||||||| || || Sbjct: 457 gacactccccaacatcaaggtccctctcatcctgggtatctggggaggcaagggacaggg 516 Query: 418 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 477 || || |||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 517 caagtcgttccagtgcgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 576 Query: 478 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 537 ||||||||||||||||| || ||||| || ||||| |||||||| ||| ||||| |||| Sbjct: 577 cgccggagagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggta 636 Query: 538 ccgtgaggctgcagacatgatca 560 ||| |||||||| ||||| |||| Sbjct: 637 ccgcgaggctgccgacattatca 659
>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds Length = 1656 Score = 414 bits (209), Expect = e-112 Identities = 386/443 (87%), Gaps = 4/443 (0%) Strand = Plus / Plus Query: 119 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 178 |||||||||||| || ||||| ||||| |||||||||||||||||||| | ||||| || Sbjct: 370 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 429 Query: 179 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 238 |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| || Sbjct: 430 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 489 Query: 239 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 298 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| || Sbjct: 490 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 549 Query: 299 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 357 | |||||||| || || |||||||||||||| | ||||| ||| |||| |||||||| Sbjct: 550 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 609 Query: 358 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 417 ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || || Sbjct: 610 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 669 Query: 418 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 477 || || |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 670 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 729 Query: 478 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 537 ||||| ||||||||||| || ||| || ||||| |||||||| ||| ||||| |||| Sbjct: 730 cgccggtgagctggagagcggcaac---ggcgagccggccaagctgatccggcagaggta 786 Query: 538 ccgtgaggctgcagacatgatca 560 ||| ||||| || ||||| |||| Sbjct: 787 ccgcgaggcggccgacattatca 809
>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full insert sequence Length = 1682 Score = 404 bits (204), Expect = e-109 Identities = 295/324 (91%), Gaps = 1/324 (0%) Strand = Plus / Plus Query: 238 gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 297 |||||||||||||| |||||||||| || | | |||||||||||||||||||||||||| Sbjct: 327 gctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatgggag 386 Query: 298 gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttca 356 ||||||||||||| |||||||||||||||||||| || ||||| ||||||| ||||||| Sbjct: 387 gcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaacttca 446 Query: 357 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 416 ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| | Sbjct: 447 tgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtcagg 506 Query: 417 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 476 ||||||| |||||||||||||| || |||||||||||||| ||||||||||||||||||| Sbjct: 507 gaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgatga 566 Query: 477 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 536 | ||||||||||||||||| || ||||| |||||||| || ||||| ||||||||||||| Sbjct: 567 gcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggt 626 Query: 537 accgtgaggctgcagacatgatca 560 |||||||||| |||||||| |||| Sbjct: 627 accgtgaggcggcagacatcatca 650 Score = 89.7 bits (45), Expect = 9e-15 Identities = 78/89 (87%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299 Query: 174 aagggcatcgtggactcgctcttccaggc 202 ||||| |||| ||||| || |||||||| Sbjct: 300 aagggtttcgtcgactcccttttccaggc 328 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Plus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 125 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 183 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 184 tcaacaggttca 195
>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase precursor (rca1) mRNA, complete cds Length = 1424 Score = 337 bits (170), Expect = 2e-89 Identities = 369/434 (85%), Gaps = 1/434 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 |||||| |||| ||| |||||||||||||| | ||| ||||||||||||| ||||| Sbjct: 273 aagggcctcgtcgacaacctcttccaggcgcctatgggggacggcacccacgtcgccgtg 332 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||| ||| |||||||||||| | ||| |||||||||||| ||| Sbjct: 333 ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 | ||||||||||| || | |||||||||||||| || ||||| |||||||| ||| Sbjct: 393 gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 |||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| || Sbjct: 453 ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatctggggaggcaaaggc 512 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| ||||| || ||||| || ||||||||||||||||||| |||||||||| Sbjct: 513 cagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcacccccatcatg 572 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||| ||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 573 atgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggcag 632 Query: 533 cggtaccgtgaggc 546 || ||||||||||| Sbjct: 633 cgctaccgtgaggc 646 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 17 gcaggtgacctcggccgtgaactaccatggcaagagctcca 57 ||||||| || ||||||||| |||||||||||||||||||| Sbjct: 107 gcaggtgtccgcggccgtgacctaccatggcaagagctcca 147
>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds Length = 1674 Score = 325 bits (164), Expect = 9e-86 Identities = 351/412 (85%), Gaps = 1/412 (0%) Strand = Plus / Plus Query: 150 gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 209 |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| | Sbjct: 235 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 294 Query: 210 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 269 |||||||| |||||| | ||||||| ||||||||||||||| ||||| || || || Sbjct: 295 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 354 Query: 270 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 329 || | |||| ||||||||| || || || ||||||||||| || |||||||||||| Sbjct: 355 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 414 Query: 330 cttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatc 388 ||||| || || || |||| |||||||||| | |||||||||||||||| || ||||| Sbjct: 415 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 474 Query: 389 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 448 |||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 475 ttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcc 534 Query: 449 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 508 |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 535 aagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgga 594 Query: 509 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 ||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| Sbjct: 595 gagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatca 646
>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds Length = 1494 Score = 325 bits (164), Expect = 9e-86 Identities = 351/412 (85%), Gaps = 1/412 (0%) Strand = Plus / Plus Query: 150 gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 209 |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| | Sbjct: 98 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 157 Query: 210 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 269 |||||||| |||||| | ||||||| ||||||||||||||| ||||| || || || Sbjct: 158 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 217 Query: 270 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 329 || | |||| ||||||||| || || || ||||||||||| || |||||||||||| Sbjct: 218 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 277 Query: 330 cttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatc 388 ||||| || || || |||| |||||||||| | |||||||||||||||| || ||||| Sbjct: 278 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 337 Query: 389 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 448 |||||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||||| Sbjct: 338 ttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcc 397 Query: 449 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 508 |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 398 aagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgga 457 Query: 509 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 ||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| Sbjct: 458 gagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatca 509
>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds Length = 1597 Score = 317 bits (160), Expect = 2e-83 Identities = 350/412 (84%), Gaps = 1/412 (0%) Strand = Plus / Plus Query: 150 gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 209 |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| | Sbjct: 128 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 187 Query: 210 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 269 |||||||| |||||| | ||||||| ||||||||||||||| ||||| || || || Sbjct: 188 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 247 Query: 270 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 329 || | |||| ||||||||| || || || ||||||||||| || |||||||||||| Sbjct: 248 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 307 Query: 330 cttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatc 388 ||||| || || || |||| |||||||||| | |||||||||||||||| || ||||| Sbjct: 308 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 367 Query: 389 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 448 |||||||||||||||||||| ||||| || ||||| ||||| ||||| |||||||||||| Sbjct: 368 ttgggtatctggggaggcaaaggtcaggggaaatccttccaatgtgaacttgtgttcgcc 427 Query: 449 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 508 |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| ||| Sbjct: 428 aagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgga 487 Query: 509 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 ||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| Sbjct: 488 gagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatca 539
>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence Length = 1750 Score = 278 bits (140), Expect = 2e-71 Identities = 359/434 (82%), Gaps = 1/434 (0%) Strand = Plus / Plus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 |||||| |||| ||| |||||||||||||| | |||||||||||| ||||| Sbjct: 273 aagggcctcgtcgacaacctcttccaggcgcctatnnnnnacggcacccacgtcgccgtg 332 Query: 234 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 293 |||||||||||||| ||| |||||||||||| | ||| |||||||||||| ||| Sbjct: 333 ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392 Query: 294 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 352 | ||||||||||| || | |||||||||||||| || ||||| |||||||| ||| Sbjct: 393 gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452 Query: 353 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 412 |||||||||||||| ||||||||| | || |||||| |||||||| ||||||||| || Sbjct: 453 ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatcgtgggaggcaaaggc 512 Query: 413 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 472 || |||||||| ||||| || ||||| || ||||||||||||||||||| |||||| Sbjct: 513 cagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcannnnnatcatg 572 Query: 473 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 532 ||||| ||||| ||||||||||| || ||||| |||||||| |||||||||||||||||| Sbjct: 573 atgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggcag 632 Query: 533 cggtaccgtgaggc 546 || ||||||||||| Sbjct: 633 cgctaccgtgaggc 646 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 17 gcaggtgacctcggccgtgaactaccatggcaagagctcca 57 ||||||| || ||||||||| |||||||||||||||||||| Sbjct: 107 gcaggtgtccgcggccgtgacctaccatggcaagagctcca 147
>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 mRNA, complete cds Length = 1559 Score = 274 bits (138), Expect = 3e-70 Identities = 367/442 (83%), Gaps = 1/442 (0%) Strand = Plus / Plus Query: 120 tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggc 179 |||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| || Sbjct: 280 tggaagggtcttgcttatgatatctccgatgaccaacaagacattaccagagggaaaggt 339 Query: 180 atcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagc 239 || || ||||| | ||||| || |||| | ||| || || ||| | || ||| | ||| Sbjct: 340 atggtcgactcattgttccaagctcccatgaacgatggtactcactatgctgtcatgagc 399 Query: 240 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 299 ||||| |||||| | ||||| ||||| || | |||||||| ||||||| ||||| || Sbjct: 400 tcctatgagtacattagccaaggccttcgcacatacgacttggacaacaacatggatgga 459 Query: 300 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 358 |||||||| || || ||||||||||||||||||||||| || || |||| |||| |||| Sbjct: 460 ttctacattgccccagctttcatggacaagcttgttgttcacatcaccaagaactacatg 519 Query: 359 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 418 ||||| || ||||| ||| | || || ||||||||||| ||||||||||| ||||||||| Sbjct: 520 acccttcctaacattaaggttcctcttatcttgggtatttggggaggcaaaggtcaagga 579 Query: 419 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 478 ||||| ||||| ||||||||||| || ||||||||||| ||||||||||| ||||||||| Sbjct: 580 aaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccattatgatgagt 639 Query: 479 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 538 |||||||| |||| ||||||||||| ||||| ||||||||| | |||||||| ||||| Sbjct: 640 gccggagaattggaaagtgggaacgccggagaaccagccaagttgatcaggcaaaggtac 699 Query: 539 cgtgaggctgcagacatgatca 560 |||||||| || ||||| |||| Sbjct: 700 cgtgaggccgccgacattatca 721
>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04 map S10003, complete sequence Length = 119238 Score = 262 bits (132), Expect = 1e-66 Identities = 178/192 (92%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 272 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 331 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 109435 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 109376 Query: 332 tgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatctt 390 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 109375 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 109316 Query: 391 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 450 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 109315 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 109256 Query: 451 gatgggcatcaa 462 |||||| ||||| Sbjct: 109255 gatggggatcaa 109244 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 109706 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 109647 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 109646 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 109587 Query: 234 ctcagctcctacgagtacgtcagccaggg 262 |||||||||||||||||| |||||||||| Sbjct: 109586 ctcagctcctacgagtacctcagccaggg 109558 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 119 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 178 ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 113205 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 113146 Query: 179 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 229 | |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 113145 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 113095 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 109158 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 109099 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatca 560 ||||||||||||||||||||||| |||||||| |||| Sbjct: 109098 gatcaggcagcggtaccgtgaggcggcagacatcatca 109061 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 109821 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 109763 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 109762 tcaacaggttca 109751 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 506 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 |||||||| || ||||| ||| ||||||||||||| ||||| || |||||||||| Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatca 112724 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 425 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 462 ||||||||||| || || |||||||||||||| ||||| Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869
>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0026K20 map S10559, complete sequence Length = 115996 Score = 262 bits (132), Expect = 1e-66 Identities = 178/192 (92%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 272 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 331 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 31312 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 31253 Query: 332 tgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatctt 390 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 31252 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 31193 Query: 391 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 450 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 31192 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 31133 Query: 451 gatgggcatcaa 462 |||||| ||||| Sbjct: 31132 gatggggatcaa 31121 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 31583 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 31524 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 31523 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 31464 Query: 234 ctcagctcctacgagtacgtcagccaggg 262 |||||||||||||||||| |||||||||| Sbjct: 31463 ctcagctcctacgagtacctcagccaggg 31435 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 119 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 178 ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 35082 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 35023 Query: 179 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 229 | |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 35022 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 34972 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 31035 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 30976 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatca 560 ||||||||||||||||||||||| |||||||| |||| Sbjct: 30975 gatcaggcagcggtaccgtgaggcggcagacatcatca 30938 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 31698 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 31640 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 31639 tcaacaggttca 31628 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 506 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 |||||||| || ||||| ||| ||||||||||||| ||||| || |||||||||| Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatca 34601 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 425 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 462 ||||||||||| || || |||||||||||||| ||||| Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 262 bits (132), Expect = 1e-66 Identities = 178/192 (92%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 272 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 331 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28304574 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28304515 Query: 332 tgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatctt 390 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 28304514 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28304455 Query: 391 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 450 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 28304454 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28304395 Query: 451 gatgggcatcaa 462 |||||| ||||| Sbjct: 28304394 gatggggatcaa 28304383 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 28304845 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 28304786 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 28304785 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 28304726 Query: 234 ctcagctcctacgagtacgtcagccaggg 262 |||||||||||||||||| |||||||||| Sbjct: 28304725 ctcagctcctacgagtacctcagccaggg 28304697 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 119 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 178 ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 28308344 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 28308285 Query: 179 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 229 | |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 28308284 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28308234 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28304297 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28304238 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatca 560 ||||||||||||||||||||||| |||||||| |||| Sbjct: 28304237 gatcaggcagcggtaccgtgaggcggcagacatcatca 28304200 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 28304960 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 28304902 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 28304901 tcaacaggttca 28304890 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 506 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 |||||||| || ||||| ||| ||||||||||||| ||||| || |||||||||| Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatca 28307863 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 425 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 462 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 262 bits (132), Expect = 1e-66 Identities = 178/192 (92%), Gaps = 1/192 (0%) Strand = Plus / Minus Query: 272 gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 331 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 28287023 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28286964 Query: 332 tgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatctt 390 || ||||| ||||||| |||||||||||||| |||||||||||| ||||||||||| | Sbjct: 28286963 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28286904 Query: 391 gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 450 |||||||||||||||||||||||| |||||||| |||||||||||||| || |||||||| Sbjct: 28286903 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28286844 Query: 451 gatgggcatcaa 462 |||||| ||||| Sbjct: 28286843 gatggggatcaa 28286832 Score = 176 bits (89), Expect = 5e-41 Identities = 134/149 (89%) Strand = Plus / Minus Query: 114 gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 173 |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| ||| Sbjct: 28287294 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 28287235 Query: 174 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 233 ||||| |||| ||||| || |||||||| |||||||| || |||||||||||||||||| Sbjct: 28287234 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 28287175 Query: 234 ctcagctcctacgagtacgtcagccaggg 262 |||||||||||||||||| |||||||||| Sbjct: 28287174 ctcagctcctacgagtacctcagccaggg 28287146 Score = 125 bits (63), Expect = 2e-25 Identities = 99/111 (89%) Strand = Plus / Minus Query: 119 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 178 ||||||||| || |||||||| ||||||||||||||||||||||||||||| |||||||| Sbjct: 28290793 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 28290734 Query: 179 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 229 | |||| ||||| || |||||||| |||| ||| || |||||||||||||| Sbjct: 28290733 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28290683 Score = 123 bits (62), Expect = 7e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || ||||| Sbjct: 28286746 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28286687 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatca 560 ||||||||||||||||||||||| |||||||| |||| Sbjct: 28286686 gatcaggcagcggtaccgtgaggcggcagacatcatca 28286649 Score = 79.8 bits (40), Expect = 9e-12 Identities = 65/72 (90%), Gaps = 1/72 (1%) Strand = Plus / Minus Query: 1 gaagaagctcaagnaagcaggtgacctcggccgtgaactaccatggcaagagctccaagg 60 ||||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||| Sbjct: 28287409 gaagaagctgaag-aagcaggtgacatcggcggtgaactaccatggcaagagctccaaca 28287351 Query: 61 ccaacaggttca 72 ||||||||||| Sbjct: 28287350 tcaacaggttca 28287339 Score = 54.0 bits (27), Expect = 5e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 506 ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 |||||||| || ||||| ||| ||||||||||||| ||||| || |||||||||| Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatca 28290312 Score = 44.1 bits (22), Expect = 0.49 Identities = 34/38 (89%) Strand = Plus / Minus Query: 425 ttccagtgtgagcttgtgttcgccaagatgggcatcaa 462 ||||||||||| || || |||||||||||||| ||||| Sbjct: 28290494 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457
>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds Length = 1436 Score = 252 bits (127), Expect = 1e-63 Identities = 227/259 (87%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 303 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatgacc 361 ||||||||||| || ||||||||||||||||| || || || |||| |||||||||| | Sbjct: 87 tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 146 Query: 362 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 421 |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || ||| Sbjct: 147 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaa 206 Query: 422 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 481 || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| ||| Sbjct: 207 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 266 Query: 482 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 541 || ||||||||||| || ||||| |||||||| || ||||| ||| |||||||||||||| Sbjct: 267 ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 326 Query: 542 gaggctgcagacatgatca 560 ||||| || ||||| |||| Sbjct: 327 gaggccgccgacatcatca 345
>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase precursor, mRNA, partial cds Length = 1336 Score = 250 bits (126), Expect = 4e-63 Identities = 205/230 (89%), Gaps = 1/230 (0%) Strand = Plus / Plus Query: 318 ttcatggacaagcttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaag 376 |||||||||||||| || ||||| |||||||| ||||||||||||||||| ||||||||| Sbjct: 22 ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 81 Query: 377 atcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgag 436 | || |||||| ||||||||||||||||||| || || |||||||| ||||| || ||| Sbjct: 82 gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 141 Query: 437 cttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagt 496 || || ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| Sbjct: 142 ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagagc 201 Query: 497 gggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggc 546 || ||||| |||||||| |||||||||||||||||||| ||||||||||| Sbjct: 202 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggc 251
>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2 mRNA, complete cds Length = 1433 Score = 246 bits (124), Expect = 7e-62 Identities = 242/280 (86%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 282 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 341 ||||||| ||||| || |||||||| |||||||| |||||||||||||||||||| || Sbjct: 256 gacaacaacatggatggtttctacattgctcctgcattcatggacaagcttgttgttcac 315 Query: 342 ctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 400 || |||| ||||||||| |||| || ||||| ||| | || || ||||||||||| ||| Sbjct: 316 atcaccaagaacttcatgtccctccctaacattaaggttcctctaatcttgggtatttgg 375 Query: 401 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 460 |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 376 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 435 Query: 461 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 520 |||||||||||||||||||||||||| ||||| ||||| ||||| || || ||||||||| Sbjct: 436 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 495 Query: 521 ctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 | |||||||| |||||||||| ||||| ||||| |||| Sbjct: 496 ttgatcaggcaaaggtaccgtgaagctgccgacataatca 535
>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.2 mRNA, complete cds Length = 1815 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 676 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 736 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 796 cagaggtaccgtgaggcagctgacttgatca 826
>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.3 mRNA, complete cds Length = 1928 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 676 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 736 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 796 cagaggtaccgtgaggcagctgacttgatca 826
>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA) transcript variant AT2G39730.1 mRNA, complete cds Length = 1833 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 705 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 765 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 825 cagaggtaccgtgaggcagctgacttgatca 855
>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein (At2g39730) mRNA, complete cds Length = 1697 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 587 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 647 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 707 cagaggtaccgtgaggcagctgacttgatca 737
>gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730/T5I7.3) mRNA, complete cds Length = 1425 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 322 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 381 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 382 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 441 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 442 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 501 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 502 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 561 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 562 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 621 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 622 cagaggtaccgtgaggcagctgacttgatca 652
>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds Length = 1674 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 590 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 650 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 710 cagaggtaccgtgaggcagctgacttgatca 740
>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1693 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 399 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 458 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 459 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 518 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 519 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 578 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 579 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 638 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 639 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 698 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 699 cagaggtaccgtgaggcagctgacttgatca 729
>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds Length = 1655 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 587 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 647 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 707 cagaggtaccgtgaggcagctgacttgatca 737
>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds Length = 1674 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 590 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 650 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 710 cagaggtaccgtgaggcagctgacttgatca 740
>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence Length = 1787 Score = 236 bits (119), Expect = 6e-59 Identities = 279/331 (84%), Gaps = 1/331 (0%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| ||| Sbjct: 705 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | Sbjct: 765 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824 Query: 530 cagcggtaccgtgaggctgcagacatgatca 560 ||| ||||||||||||| || ||| |||||| Sbjct: 825 cagaggtaccgtgaggcagctgacttgatca 855
>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2 mRNA, partial cds Length = 1462 Score = 230 bits (116), Expect = 4e-57 Identities = 240/280 (85%), Gaps = 1/280 (0%) Strand = Plus / Plus Query: 282 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 341 ||||||| ||||| || ||||||||||||||||| |||||||||||||||||||| || Sbjct: 257 gacaacaacatggatggtttctacatcgctcctgcattcatggacaagcttgttgttcac 316 Query: 342 ctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 400 || ||| ||||||||| |||| || ||||| ||| | || || ||| ||||||| ||| Sbjct: 317 atcagcaagaacttcatgtccctccctaacattaaggttcctctaatcctgggtatttgg 376 Query: 401 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 460 |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| ||| Sbjct: 377 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 436 Query: 461 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 520 |||||||||||||||||||||||||| ||||| ||||| ||||| || || ||||||||| Sbjct: 437 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 496 Query: 521 ctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 | |||||||| |||||||||| || || ||||| |||| Sbjct: 497 ttgatcaggcaaaggtaccgtgaagccgccgacataatca 536
>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1694 Score = 228 bits (115), Expect = 2e-56 Identities = 248/291 (85%), Gaps = 1/291 (0%) Strand = Plus / Plus Query: 271 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 330 ||||| |||| ||||||| ||||| || |||||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 331 ttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatct 389 |||| ||||| || |||| |||||| ||| || || ||||||||||| || || |||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 390 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 449 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610 Query: 450 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 509 ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || |||| Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670 Query: 510 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatca 560 | || |||||||| |||||||| |||||||||| ||||| ||||| |||| Sbjct: 671 aacctgccaagctgatcaggcaaaggtaccgtgaagctgctgacattatca 721
>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds Length = 1832 Score = 228 bits (115), Expect = 2e-56 Identities = 224/259 (86%), Gaps = 1/259 (0%) Strand = Plus / Plus Query: 301 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatga 359 ||||||| || ||||| || ||||||||||||||||| || || |||| |||||| ||| Sbjct: 630 tctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttcttga 689 Query: 360 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 419 | |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| | Sbjct: 690 acttgcccaacatcaagataccactcatcttgggtgtttggggaggcaagggtcaaggta 749 Query: 420 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 479 |||| ||||| ||||||||||||||||||||| | || || ||||||||||||||||||| Sbjct: 750 aatccttccaatgtgagcttgtgttcgccaagttaggaataaaccccatcatgatgagtg 809 Query: 480 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 539 ||||||| |||| ||||| || || ||||||||||| ||| | |||||||| |||||| Sbjct: 810 ccggagaattggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtacc 869 Query: 540 gtgaggctgcagacatgat 558 ||||||| |||||| |||| Sbjct: 870 gtgaggcagcagacttgat 888
>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds Length = 1809 Score = 218 bits (110), Expect = 1e-53 Identities = 222/258 (86%), Gaps = 1/258 (0%) Strand = Plus / Plus Query: 299 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 357 ||||||||| || ||| |||||||||||||| ||||||| || || |||| |||| | | Sbjct: 514 cttctacattgccccttctttcatggacaagattgttgttcacatcaccaagaactactt 573 Query: 358 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 417 || | |||| ||||||||| | || || ||||||||||| ||||||||||| |||||||| Sbjct: 574 gaacttgcctaacatcaaggttcccctgatcttgggtatttggggaggcaaaggtcaagg 633 Query: 418 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 477 ||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 634 taaatccttccaatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatgag 693 Query: 478 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 537 ||| ||||| |||| ||||| ||||| ||||||||||| ||| | |||||||| |||| Sbjct: 694 tgcgggagaattggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggta 753 Query: 538 ccgtgaggctgcagacat 555 ||||||||| |||||||| Sbjct: 754 ccgtgaggcagcagacat 771
>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear gene for chloroplast product Length = 1671 Score = 218 bits (110), Expect = 1e-53 Identities = 219/254 (86%), Gaps = 1/254 (0%) Strand = Plus / Plus Query: 300 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 358 |||||||| ||||||||||| |||||||||||||||| || || |||| ||||||||| Sbjct: 469 ttctacattgctcctgcttttctggacaagcttgttgttcacatcaccaagaacttcatg 528 Query: 359 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 418 ||| |||||||||||||| | || ||||| | |||||||||||||||||||| |||||| Sbjct: 529 accttgcccaacatcaaggttcctctcattcttggtatctggggaggcaagggacaagga 588 Query: 419 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 478 || || ||||| ||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 589 aagtctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 648 Query: 479 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 538 || |||||| |||| ||||| || || ||||||||||| || | ||||||||| | ||| Sbjct: 649 gctggagagttggaaagtggaaatgccggagagccagcaaaattgatcaggcagagatac 708 Query: 539 cgtgaggctgcaga 552 ||||| |||||||| Sbjct: 709 cgtgaagctgcaga 722 Score = 54.0 bits (27), Expect = 5e-04 Identities = 51/59 (86%) Strand = Plus / Plus Query: 120 tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 178 ||||||||||| || ||||||||||| || ||||| || |||||||| || |||||||| Sbjct: 295 tggaagggtctggcctacgatatctctgatgaccaacaagacatcacaagggggaaggg 353
>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds Length = 1634 Score = 218 bits (110), Expect = 1e-53 Identities = 225/262 (85%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 300 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaa-cttcatg 358 |||||||| ||||| |||||||||||||||||||| || || || |||||| ||||||| Sbjct: 476 ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 535 Query: 359 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 418 || || |||||||| ||| | || ||||| ||||||||||||||||| || |||||||| Sbjct: 536 actctccccaacataaaggttcctctcattttgggtatctggggaggtaaaggtcaaggt 595 Query: 419 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 478 ||||| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||| Sbjct: 596 aaatctttccagtgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 655 Query: 479 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 538 |||||||| ||||||| || ||||| |||||||| || ||| | |||||||| |||| Sbjct: 656 gccggagaattggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgt 715 Query: 539 cgtgaggctgcagacatgatca 560 |||||||| || ||||| |||| Sbjct: 716 cgtgaggcggccgacatcatca 737
>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete cds Length = 1674 Score = 218 bits (110), Expect = 1e-53 Identities = 240/282 (85%), Gaps = 1/282 (0%) Strand = Plus / Plus Query: 240 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 299 |||||||| ||||||||||| || || || ||||| |||| ||||||| ||| || Sbjct: 396 tcctacgaatacgtcagccaaggtcttcgccagtacaacttggacaacaagttggacgga 455 Query: 300 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 358 |||||||||||||||||||||||||||||||||||||| || || |||| |||||| || Sbjct: 456 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttg 515 Query: 359 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 418 | |||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| Sbjct: 516 aaattgcccaacatcaaggttccacttatcttgggtatctggggaggcaaaggtcaaggc 575 Query: 419 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 478 ||||||||||||||||| ||||| ||| |||||||| ||||||||||| ||||||||| Sbjct: 576 aaatcattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgagt 635 Query: 479 gccggagagctggagagtgggaacgctggagagccagccaag 520 || ||||| |||| ||||| || || ||||||||||||||| Sbjct: 636 gctggagaattggaaagtggaaatgcaggagagccagccaag 677
>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 1724 Score = 210 bits (106), Expect = 4e-51 Identities = 224/262 (85%), Gaps = 1/262 (0%) Strand = Plus / Plus Query: 271 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 330 ||||| |||| ||||||| ||||| || |||||||| || || || ||||||||||||| Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490 Query: 331 ttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatct 389 |||| ||||| || |||| |||||| ||| || || ||||||||||| || || |||| Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550 Query: 390 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 449 ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || |||| Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610 Query: 450 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 509 ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || |||| Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670 Query: 510 agccagccaagctcatcaggca 531 |||| || ||||| |||||||| Sbjct: 671 agcccgcaaagctgatcaggca 692
>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds Length = 1627 Score = 196 bits (99), Expect = 5e-47 Identities = 211/247 (85%), Gaps = 1/247 (0%) Strand = Plus / Plus Query: 271 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 330 ||||| |||| ||||||| || || || |||||||| ||||| ||||| ||||||||| Sbjct: 436 agtacaactttgacaacatcaaggatggtttctacattgctccagcttttttggacaagc 495 Query: 331 ttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatct 389 ||||||| || || |||| |||||||||||| |||||||||||||| | || ||||| Sbjct: 496 ttgttgttcacatcgccaagaacttcatgaccttgcccaacatcaaggttcctctcattc 555 Query: 390 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 449 | ||| |||||||||||||||| ||||||||||| ||||| ||||||||||| || |||| Sbjct: 556 ttggtgtctggggaggcaagggacaaggaaaatctttccaatgtgagcttgtctttgcca 615 Query: 450 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 509 ||||||| ||||||||||||||||||||||| |||||| |||| ||||| || || |||| Sbjct: 616 agatgggaatcaaccccatcatgatgagtgctggagagttggaaagtggaaatgccggag 675 Query: 510 agccagc 516 ||||||| Sbjct: 676 agccagc 682
>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase Length = 1652 Score = 186 bits (94), Expect = 5e-44 Identities = 238/282 (84%), Gaps = 3/282 (1%) Strand = Plus / Plus Query: 231 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 290 ||||| ||||| ||||| ||||| ||||| ||||| || ||||| |||| ||||||| Sbjct: 391 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 450 Query: 291 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 349 |||| || || ||||| ||||||||||||||||||||||||||||| || || |||| Sbjct: 451 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 510 Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatct-ggggaggcaa 408 |||||| |||| ||||| ||||||||| | ||||| || ||||| ||| |||||||||| Sbjct: 511 aacttcttgactctgcctaacatcaaggttccacttattttgggc-tctcggggaggcaa 569 Query: 409 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 468 |||||||| ||||| ||||||||||||||||| | ||||||||||| |||||||| || Sbjct: 570 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 629 Query: 469 catgatgagtgccggagagctggagagtgggaacgctggaga 510 |||||||||||| |||||||| |||||||| ||||| ||||| Sbjct: 630 catgatgagtgctggagagcttgagagtggaaacgcaggaga 671
>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds Length = 1656 Score = 184 bits (93), Expect = 2e-43 Identities = 190/221 (85%), Gaps = 1/221 (0%) Strand = Plus / Plus Query: 297 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttc 355 ||||||||||| || ||||||||||||||||| |||||||| || || |||| |||||| Sbjct: 434 ggcttctacattgcccctgctttcatggacaaacttgttgttcacatcaccaagaacttc 493 Query: 356 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 415 |||| |||||||||||||| | ||||||||||||||| | ||||||||||| |||||| Sbjct: 494 ttgacattgcccaacatcaaggttccactcatcttgggtgtatggggaggcaaaggtcaa 553 Query: 416 ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 475 || ||||||||||| ||||||||||| ||| |||||||| ||||||||||| |||||| Sbjct: 554 ggtaaatcattccaatgtgagcttgtcttcagaaagatgggaatcaaccccattatgatg 613 Query: 476 agtgccggagagctggagagtgggaacgctggagagccagc 516 ||||| ||||| |||| ||||| || || ||||||||||| Sbjct: 614 agtgctggagaattggaaagtggaaatgcaggagagccagc 654
>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase (pJQ4) Length = 1655 Score = 180 bits (91), Expect = 3e-42 Identities = 185/215 (86%), Gaps = 1/215 (0%) Strand = Plus / Plus Query: 300 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 358 ||||||||||||||| |||||||||||||||||||||| || || |||| |||||| || Sbjct: 426 ttctacatcgctccttctttcatggacaagcttgttgttcacatcaccaagaacttcttg 485 Query: 359 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 418 | |||||||||||||| | |||||||| |||||| ||||||||||||| |||||||| Sbjct: 486 aaattgcccaacatcaaggttccactcattttgggtgtctggggaggcaaaggtcaaggt 545 Query: 419 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 478 ||||| ||||||||||||||||| ||| |||||||| |||||||| || ||||||||| Sbjct: 546 aaatctttccagtgtgagcttgtcttcagaaagatgggaatcaaccctattatgatgagt 605 Query: 479 gccggagagctggagagtgggaacgctggagagcc 513 |||||||| |||| ||||| || || |||||||| Sbjct: 606 gccggagaattggaaagtggaaatgcaggagagcc 640
>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase mRNA Length = 1853 Score = 168 bits (85), Expect = 1e-38 Identities = 212/253 (83%), Gaps = 1/253 (0%) Strand = Plus / Plus Query: 309 gctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatgaccctgccc 367 ||||| ||||| ||||||||||||||||| || || |||| |||||||||||||| || Sbjct: 485 gctcccgcttttatggacaagcttgttgttcacatcaccaagaacttcatgacccttcct 544 Query: 368 aacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattc 427 ||||| ||| | || |||||||||||||| ||||||||||| ||||| || || || ||| Sbjct: 545 aacatgaaggttcctctcatcttgggtatttggggaggcaaaggtcagggcaagtctttc 604 Query: 428 cagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagag 487 ||||| |||||||| || ||||||||| | |||| ||| |||||||||||||||||||| Sbjct: 605 cagtgcgagcttgtctttgccaagatgagaatcagccctatcatgatgagtgccggagaa 664 Query: 488 ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 547 |||| ||||| ||||| ||||| || || ||||| |||||||| |||||||||| || Sbjct: 665 ttggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagca 724 Query: 548 gcagacatgatca 560 || ||||| |||| Sbjct: 725 gccgacattatca 737 Score = 56.0 bits (28), Expect = 1e-04 Identities = 52/60 (86%) Strand = Plus / Plus Query: 143 ctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggc 202 |||||||||||| || |||||||| ||||| ||||| | |||||||| ||||||||||| Sbjct: 319 ctccgacgaccaacaagacatcacaagaggaaagggtaaggtggactccctcttccaggc 378
>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence Length = 1519 Score = 155 bits (78), Expect = 2e-34 Identities = 184/218 (84%), Gaps = 1/218 (0%) Strand = Plus / Plus Query: 300 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 358 |||||||||||||||||||||||||||||||||||||| || || |||| |||||| | Sbjct: 473 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttctta 532 Query: 359 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 418 || |||||||||||||| | ||||| || |||||| | |||||||| || |||||||| Sbjct: 533 acgttgcccaacatcaaggttccacttattttgggtgtttggggaggaaaaggtcaaggt 592 Query: 419 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 478 ||||||||||| ||||||||||| ||| |||||||| |||||||| || ||||||||| Sbjct: 593 aaatcattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgagt 652 Query: 479 gccggagagctggagagtgggaacgctggagagccagc 516 || ||||| | || ||||| || || ||||||||||| Sbjct: 653 gctggagaattagaaagtggaaatgcaggagagccagc 690
>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene) Length = 678 Score = 147 bits (74), Expect = 5e-32 Identities = 168/198 (84%), Gaps = 1/198 (0%) Strand = Plus / Plus Query: 302 ctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaa-cttcatgac 360 |||||| ||||||||||| ||||||||||||||||| || |||| |||| |||||||| Sbjct: 156 ctacattgctcctgcttttatggacaagcttgttgttcacatctcgaaaaacttcatgaa 215 Query: 361 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaa 420 | |||| ||||||||| | || ||||| | ||||| ||||||||||||||||||||||| Sbjct: 216 cttgcctaacatcaaggttcctctcattcttggtatttggggaggcaagggtcaaggaaa 275 Query: 421 atcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgc 480 || ||||| ||||||||||| || || || |||| |||||||| || ||||||||||| Sbjct: 276 gtccttccaatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtgc 335 Query: 481 cggagagctggagagtgg 498 ||| || ||||||||||| Sbjct: 336 cggtgaactggagagtgg 353
>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase activase pseudogene, partial sequence Length = 472 Score = 111 bits (56), Expect = 2e-21 Identities = 122/140 (87%), Gaps = 3/140 (2%) Strand = Plus / Plus Query: 407 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccc 466 ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| |||| || Sbjct: 1 aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatcactcct 60 Query: 467 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 526 |||||||||||||||||||| | || ||| |||||||| |||||||||| ||||||||| Sbjct: 61 atcatgatgagtgccggagaattagaaagt-ggaacgct-gagagccagctaagctcatc 118 Query: 527 aggcagcggtaccgtgaggc 546 || |||| |||||||||||| Sbjct: 119 agacagc-gtaccgtgaggc 137
>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds Length = 1063 Score = 105 bits (53), Expect = 2e-19 Identities = 95/109 (87%) Strand = Plus / Plus Query: 408 agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 467 |||| ||||||||||| ||||| ||||||||| || ||||||||||| |||||||||| Sbjct: 7 agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66 Query: 468 tcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 516 ||||||||||||| |||||||| || ||||| || || ||||||||||| Sbjct: 67 tcatgatgagtgctggagagcttgaaagtggaaatgcaggagagccagc 115
>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase {alternatively spliced} [spinach, Genomic, 3691 nt] Length = 3691 Score = 105 bits (53), Expect = 2e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 375 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 434 |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| |||| Sbjct: 2238 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 2297 Query: 435 agcttgtgttcgccaag 451 ||||||||||||||||| Sbjct: 2298 agcttgtgttcgccaag 2314 Score = 87.7 bits (44), Expect = 4e-14 Identities = 83/96 (86%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 |||||||||||||||||||||||| |||| ||||| || || ||||||||||| ||| | Sbjct: 2421 ccccatcatgatgagtgccggagaattggaaagtggaaatgcaggagagccagctaagtt 2480 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgat 558 |||||||| ||||||||||||| |||||| |||| Sbjct: 2481 gatcaggcaaaggtaccgtgaggcagcagacttgat 2516 Score = 54.0 bits (27), Expect = 5e-04 Identities = 67/79 (84%), Gaps = 1/79 (1%) Strand = Plus / Plus Query: 299 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 357 ||||||||| || ||||| || ||||||||||||||||| || || |||| |||||| | Sbjct: 2067 cttctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttctt 2126 Query: 358 gaccctgcccaacatcaag 376 || | |||||||||||||| Sbjct: 2127 gaacttgcccaacatcaag 2145
>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds Length = 1216 Score = 95.6 bits (48), Expect = 1e-16 Identities = 72/80 (90%) Strand = Plus / Plus Query: 383 ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 442 ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| Sbjct: 186 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 245 Query: 443 ttcgccaagatgggcatcaa 462 || ||||||||||| ||||| Sbjct: 246 tttgccaagatgggaatcaa 265 Score = 75.8 bits (38), Expect = 1e-10 Identities = 83/98 (84%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 |||||||||||||||||||||||| ||||||| || ||||| |||||||| || ||| | Sbjct: 467 ccccatcatgatgagtgccggagaattggagagcggcaacgcaggagagcccgcgaagtt 526 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatca 560 |||||||| |||| |||||||| || ||||| |||| Sbjct: 527 gatcaggcaacggtgtcgtgaggcggccgacatcatca 564 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 300 ttctacatcgctcctgctttcatggacaagcttgt 334 |||||||| ||||| |||||||||||||||||||| Sbjct: 6 ttctacatagctccagctttcatggacaagcttgt 40
>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase Length = 2031 Score = 93.7 bits (47), Expect = 6e-16 Identities = 137/167 (82%) Strand = Plus / Plus Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 |||||| ||||||| || ||||| ||| | || ||||| ||||| | |||||||| || Sbjct: 522 aacttcttgaccctcccgaacattaaggttcctctcattctgggtgtttggggaggtaaa 581 Query: 410 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 469 ||||||||||| || ||||||||||| ||||| || || |||||||| |||||||| || Sbjct: 582 ggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatgggaatcaaccctatt 641 Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagc 516 ||||||||||| || || | || |||||||| || ||||||||||| Sbjct: 642 atgatgagtgctggggaattagaaagtgggaatgcaggagagccagc 688
>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete sequence Length = 92624 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Minus Query: 380 ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 439 ||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 14733 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 14674 Query: 440 gtgttcgccaagatgggcatcaa 462 || | ||||||||||| ||||| Sbjct: 14673 gtcatggccaagatgggtatcaa 14651 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Minus Query: 467 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 526 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 14555 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 14496 Query: 527 aggcagcggtaccgtgaggctgcagacatgatca 560 | ||| ||||||||||||| || ||| |||||| Sbjct: 14495 cgtcagaggtaccgtgaggcagctgacttgatca 14462 Score = 69.9 bits (35), Expect = 9e-09 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand = Plus / Minus Query: 303 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatgacc 361 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 14910 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 14851 Query: 362 ctgcccaacatcaag 376 ||||| ||||||||| Sbjct: 14850 ctgcctaacatcaag 14836
>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase activase (rca) gene, complete cds Length = 3974 Score = 85.7 bits (43), Expect = 1e-13 Identities = 73/83 (87%) Strand = Plus / Plus Query: 380 ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 439 ||||| || |||||||| ||||||||||| |||||||| ||||| ||||||||||||||| Sbjct: 2550 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 2609 Query: 440 gtgttcgccaagatgggcatcaa 462 || | ||||||||||| ||||| Sbjct: 2610 gtcatggccaagatgggtatcaa 2632 Score = 75.8 bits (38), Expect = 1e-10 Identities = 80/94 (85%) Strand = Plus / Plus Query: 467 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 526 |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| Sbjct: 2728 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 2787 Query: 527 aggcagcggtaccgtgaggctgcagacatgatca 560 | ||| ||||||||||||| || ||| |||||| Sbjct: 2788 cgtcagaggtaccgtgaggcagctgacttgatca 2821 Score = 69.9 bits (35), Expect = 9e-09 Identities = 66/75 (88%), Gaps = 1/75 (1%) Strand = Plus / Plus Query: 303 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatgacc 361 ||||| ||||||||||||||||||||||||||||| || || |||| |||||| |||| Sbjct: 2373 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 2432 Query: 362 ctgcccaacatcaag 376 ||||| ||||||||| Sbjct: 2433 ctgcctaacatcaag 2447
>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence Length = 108028 Score = 79.8 bits (40), Expect = 9e-12 Identities = 76/88 (86%) Strand = Plus / Minus Query: 374 aagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgt 433 ||||| || ||||| ||||| || ||||||||||| ||||||||||| ||||| || ||| Sbjct: 7541 aagattcctctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgt 7482 Query: 434 gagcttgtgttcgccaagatgggcatca 461 |||||||| || ||||||||||| |||| Sbjct: 7481 gagcttgtatttgccaagatgggaatca 7454 Score = 50.1 bits (25), Expect = 0.008 Identities = 64/77 (83%) Strand = Plus / Minus Query: 470 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 529 ||||||||||||||||| |||| ||||| || || |||||||| || ||| | || ||| Sbjct: 7262 atgatgagtgccggagaattggaaagtggaaatgcaggagagcctgcaaagttgattagg 7203 Query: 530 cagcggtaccgtgaggc 546 || ||||||||||||| Sbjct: 7202 caaaggtaccgtgaggc 7186
>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence Length = 105218 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 392 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 451 |||||||||||||| || |||||||||||||| ||||| ||||||||| || |||||| Sbjct: 104933 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 104874 Query: 452 atgggcatcaa 462 ||||||||||| Sbjct: 104873 atgggcatcaa 104863 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 467 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 516 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 104183 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 104134
>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence Length = 163160 Score = 77.8 bits (39), Expect = 3e-11 Identities = 63/71 (88%) Strand = Plus / Minus Query: 392 ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 451 |||||||||||||| || |||||||||||||| ||||| ||||||||| || |||||| Sbjct: 83958 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 83899 Query: 452 atgggcatcaa 462 ||||||||||| Sbjct: 83898 atgggcatcaa 83888 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 282 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgt 337 ||||||||||||| || || ||||| || |||||||| ||||||||||||||||| Sbjct: 84295 gacaacaccatggatggtttttacattgcacctgcttttatggacaagcttgttgt 84240 Score = 44.1 bits (22), Expect = 0.49 Identities = 43/50 (86%) Strand = Plus / Minus Query: 467 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 516 |||||||||||||| |||||||| || ||||| || || ||||| ||||| Sbjct: 83208 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 83159
>emb|Y10657.1|CLRCAGENE C.littorale rca gene Length = 2513 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 453 tgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagc 512 ||||||||| ||||||| | ||| |||||| ||||||||| ||| ||||| || |||| Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctggagtctggtaacgccggtgagc 1502 Query: 513 cagccaagctcatcaggcagcggtaccgtgaggct 547 | |||||||||||| | ||||| ||||| |||||| Sbjct: 1503 ccgccaagctcatccgccagcgctaccgcgaggct 1537 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 ||||||||| ||||||||| |||||| | || |||||| ||||||||||||| |||||| Sbjct: 1182 aacttcatggacctgcccaagatcaaggttcccctcatcctgggtatctggggtggcaag 1241 Query: 410 ggtcaaggaaa 420 || || ||||| Sbjct: 1242 ggccagggaaa 1252
>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence Length = 619 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 109 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 168 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 169 gatccgtcagcgctaccgtgaggccgcggacctgatc 205
>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence Length = 637 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatc 223
>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence Length = 633 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatc 219
>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence Length = 635 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatc 221
>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence Length = 635 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatc 221
>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence Length = 639 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatc 225
>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence Length = 633 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatc 219
>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence Length = 635 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatc 221
>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence Length = 633 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatc 219
>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence Length = 627 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 117 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 176 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 177 gatccgtcagcgctaccgtgaggcggcggacctgatc 213
>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence Length = 635 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatc 221
>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence Length = 635 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatc 221
>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence Length = 635 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatc 221
>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence Length = 637 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatc 223
>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence Length = 635 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatc 221
>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence Length = 639 Score = 58.0 bits (29), Expect = 3e-05 Identities = 80/97 (82%) Strand = Plus / Plus Query: 463 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 522 ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || ||||| Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188 Query: 523 catcaggcagcggtaccgtgaggctgcagacatgatc 559 ||| | ||||| ||||||||||| || ||| ||||| Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatc 225
>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase activase mRNA, complete cds Length = 1693 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 350 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 409 ||||||||| ||||||||| |||||| | || ||||| ||||||||||||| |||||| Sbjct: 411 aacttcatggacctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaag 470 Query: 410 gg 411 || Sbjct: 471 gg 472
>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds Length = 4500 Score = 46.1 bits (23), Expect = 0.12 Identities = 44/51 (86%) Strand = Plus / Plus Query: 361 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 411 ||||||||| |||||| | || ||||| ||||||||||||| |||||||| Sbjct: 1634 cctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaaggg 1684
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 46.1 bits (23), Expect = 0.12 Identities = 23/23 (100%) Strand = Plus / Minus Query: 145 ccgacgaccagcaggacatcacc 167 ||||||||||||||||||||||| Sbjct: 1452088 ccgacgaccagcaggacatcacc 1452066
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 44.1 bits (22), Expect = 0.49 Identities = 22/22 (100%) Strand = Plus / Minus Query: 187 actcgctcttccaggcgcccac 208 |||||||||||||||||||||| Sbjct: 2553524 actcgctcttccaggcgcccac 2553503
>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome Length = 4222334 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 catggcagcggagaacatcg 96 |||||||||||||||||||| Sbjct: 1379894 catggcagcggagaacatcg 1379875
>gb|AE010322.1| Methanopyrus kandleri AV19 section 21 of 157 of the complete genome Length = 10732 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 141 atctccgacgaccagcaggacatc 164 |||||| ||||||||||||||||| Sbjct: 8676 atctcccacgaccagcaggacatc 8653
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 gcagcggagaacatcgacga 100 |||||||||||||||||||| Sbjct: 173412 gcagcggagaacatcgacga 173393
>ref|XM_520373.1| PREDICTED: Pan troglodytes LOC464867 (LOC464867), mRNA Length = 1685 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 cccacgggcgacggcacccacgag 227 ||||||||||||| |||||||||| Sbjct: 1369 cccacgggcgacgtcacccacgag 1392
>ref|NM_001003053.1| Canis familiaris androgen receptor (dihydrotestosterone receptor; testicular feminization; spinal and bulbar muscular atrophy; Kennedy disease) (AR), mRNA Length = 3577 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 gcaagagctccaaggccaac 65 |||||||||||||||||||| Sbjct: 3271 gcaagagctccaaggccaac 3290
>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence Length = 2107794 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccctgcccaacatcaagatc 379 |||||||||||||||||||| Sbjct: 1130357 ccctgcccaacatcaagatc 1130376
>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome Length = 4222645 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 77 catggcagcggagaacatcg 96 |||||||||||||||||||| Sbjct: 1380755 catggcagcggagaacatcg 1380736
>ref|NM_017617.2| Homo sapiens Notch homolog 1, translocation-associated (Drosophila) (NOTCH1), mRNA Length = 9312 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 cccacgggcgacggcacccacgag 227 ||||||||||||| |||||||||| Sbjct: 703 cccacgggcgacgtcacccacgag 726
>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete sequence Length = 101284 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 ttccagtgtgagcttgtgtt 444 |||||||||||||||||||| Sbjct: 97287 ttccagtgtgagcttgtgtt 97268
>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence Length = 193170 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 ggcttctacatcgctcctgctttc 320 ||||||| |||||||||||||||| Sbjct: 147044 ggcttctgcatcgctcctgctttc 147067
>emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chromosome 9 Contains the 3' end of the gene for activator of G-protein signalling 3 (AGS3), two novel genes, the CARD9 gene for caspase recruitment domain family member 9, the SNAPC4 gene for a 190kDa small nuclear RNA activating complex polypeptide 4, the SDCCAG3 gene for serologically defined colon cancer antigen 3, the INPP5E gene for a 72kDa inositol polyphosphate-5-phosphatase, the gene for phosphatidylinositol polyphosphate 5-phosphatase type IV (PPI5PIV), a novel gene (KIAA0310), the 3' end of the NOTCH1 gene for Notch homolog 1 translocation-associated (Drosophila) and twenty CpG islands, complete sequence Length = 188462 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 cccacgggcgacggcacccacgag 227 ||||||||||||| |||||||||| Sbjct: 166513 cccacgggcgacgtcacccacgag 166490
>gb|AC104422.4| Homo sapiens chromosome 18, clone RP11-260B14, complete sequence Length = 147210 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ccagagggaagggcatcgtg 185 |||||||||||||||||||| Sbjct: 35948 ccagagggaagggcatcgtg 35967
>gb|AF197950.1| Canis familiaris androgen receptor (AR) mRNA, complete cds Length = 3577 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 gcaagagctccaaggccaac 65 |||||||||||||||||||| Sbjct: 3271 gcaagagctccaaggccaac 3290
>gb|AC100806.2| Homo sapiens chromosome 18, clone CTB-2341H11, complete sequence Length = 81641 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 ccagagggaagggcatcgtg 185 |||||||||||||||||||| Sbjct: 47211 ccagagggaagggcatcgtg 47230
>gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 of 195 of the complete sequence Length = 10900 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccctgcccaacatcaagatc 379 |||||||||||||||||||| Sbjct: 7760 ccctgcccaacatcaagatc 7741
>gb|AF308602.1|AF308602 Homo sapiens NOTCH 1 (N1) mRNA, complete cds Length = 7693 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 cccacgggcgacggcacccacgag 227 ||||||||||||| |||||||||| Sbjct: 703 cccacgggcgacgtcacccacgag 726
>gb|AC019012.4|AC019012 Genomic Sequence For Arabidopsis thaliana Clone T3J11 From Chromosome V, complete sequence Length = 130299 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 56 caaggccaacaggttcacagtcat 79 ||||||||||||||||| |||||| Sbjct: 13824 caaggccaacaggttcagagtcat 13847
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 137 cgatatctccgacgaccagc 156 |||||||||||||||||||| Sbjct: 4182002 cgatatctccgacgaccagc 4181983
>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence Length = 2124241 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccctgcccaacatcaagatc 379 |||||||||||||||||||| Sbjct: 1147720 ccctgcccaacatcaagatc 1147739
>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 (ENSANGG00000011813), partial mRNA Length = 1773 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 444 tcgccaagatgggcatcaac 463 |||||||||||||||||||| Sbjct: 641 tcgccaagatgggcatcaac 660
>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete sequence Length = 219072 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 297 ggcttctacatcgctcctgctttc 320 ||||||| |||||||||||||||| Sbjct: 141825 ggcttctgcatcgctcctgctttc 141848
>gb|AC018660.1|AC018660 Genomic Sequence For Arabidopsis thaliana Clone F11P10, Chromosome V, complete sequence Length = 105589 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 caaggccaacaggttcacagtcat 79 ||||||||||||||||| |||||| Sbjct: 27506 caaggccaacaggttcagagtcat 27483
>gb|AF030027.1|AF030027 Equine herpesvirus 4 strain NS80567, complete genome Length = 145597 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 tctctccaaaacttcatgac 360 |||||||||||||||||||| Sbjct: 26997 tctctccaaaacttcatgac 26978
>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain 2308 Length = 2121359 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ccctgcccaacatcaagatc 379 |||||||||||||||||||| Sbjct: 1144872 ccctgcccaacatcaagatc 1144891
>gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltransferase (cdsA), group 1 outer membrane protein (omp1), LpxD (lpxD), FabZ (fabZ), and LpxA (lpxA) genes, complete cds Length = 8895 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ccctgcccaacatcaagatc 379 |||||||||||||||||||| Sbjct: 8238 ccctgcccaacatcaagatc 8219
>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 489 tggagagtgggaacgctgga 508 |||||||||||||||||||| Sbjct: 90247 tggagagtgggaacgctgga 90228
>gb|M73980.1|HUMTAN1 Human TAN-1 mRNA (homologue of Drosophila Notch gene), 5' end Length = 7332 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 cccacgggcgacggcacccacgag 227 ||||||||||||| |||||||||| Sbjct: 703 cccacgggcgacgtcacccacgag 726
>emb|AL806521.9| Mouse DNA sequence from clone RP23-385N7 on chromosome 4, complete sequence Length = 187066 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 tctctccaaaacttcatgac 360 |||||||||||||||||||| Sbjct: 5026 tctctccaaaacttcatgac 5045 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,476,730 Number of Sequences: 3902068 Number of extensions: 4476730 Number of successful extensions: 74852 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74321 Number of HSP's gapped (non-prelim): 466 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
