ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8c03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genom... 56 1e-04
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 56 1e-04
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
4gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4... 48 0.024
5gb|AC090707.16| Homo sapiens chromosome 11, clone RP11-701I24, c... 42 1.5
6gb|AC135849.6| Pan troglodytes clone ptb-33n14, complete sequence 42 1.5
7dbj|AK057101.1| Homo sapiens cDNA FLJ32539 fis, clone SMINT2000518 42 1.5
8gb|AC000085.5| Homo sapiens Chromosome 22q11.2 BAC Clone 72f8 In... 42 1.5
9gb|AC000073.1| Homo sapiens Chromosome 22q11.2 Cosmid Clone 19d3... 42 1.5
10dbj|AP003035.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 42 1.5
11gb|AF201337.4| Homo sapiens chromosome 8 clone GS1-44D20 map q13... 40 5.8
12gb|AC147056.3| Pan troglodytes BAC clone RP43-153F5 from 7, comp... 40 5.8
13emb|Z82267.1|CEF38C2 Caenorhabditis elegans Cosmid F38C2, comple... 40 5.8
14gb|AC125245.4| Homo sapiens BAC clone RP11-236P13 from 4, comple... 40 5.8
15gb|AC013470.10| Homo sapiens BAC clone RP11-472F21 from 7, compl... 40 5.8
16emb|AL592044.4| Human DNA sequence from clone RP13-407F1 on chro... 40 5.8
17emb|AL590653.11| Human DNA sequence from clone RP11-142B3 on chr... 40 5.8
18emb|AL513328.12| Human DNA sequence from clone RP13-461N9 on chr... 40 5.8
19emb|AL365508.19| Human DNA sequence from clone RP11-301B7 on chr... 40 5.8
20emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on ch... 40 5.8
21emb|AL356791.9| Human DNA sequence from clone RP11-80I3 on chrom... 40 5.8
22emb|AL353651.11| Human DNA sequence from clone RP4-726F1 on chro... 40 5.8
23emb|AL136363.4| Human DNA sequence from clone RP6-43L17 on chrom... 40 5.8
24gb|AC126957.4| Rattus norvegicus 1 BAC CH230-12B13 (Children's H... 40 5.8
25gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Can... 40 5.8
26gb|AC131949.1| Homo sapiens BAC clone RP11-240J11 from 4, comple... 40 5.8
27ref|NM_001001276.1| Rattus norvegicus olfactory receptor 377 (pr... 40 5.8
28gb|AC108732.11| Homo sapiens 3 BAC RP11-812P15 (Roswell Park Can... 40 5.8
29gb|AC090082.3| Homo sapiens chromosome 8, clone CTD-2294B10, com... 40 5.8
30gb|AC116424.1| Homo sapiens 3 BAC RP11-265F19 (Roswell Park Canc... 40 5.8
31gb|AC109439.3| Homo sapiens chromosome 5 clone CTB-1I21, complet... 40 5.8
32gb|AC084758.3| Homo sapiens chromosome 15 clone RP11-348A14 map ... 40 5.8
33dbj|AK140742.1| Mus musculus 16 days embryo head cDNA, RIKEN ful... 40 5.8
34gb|AC034154.6| Homo sapiens BAC clone RP11-242D9 from 4, complet... 40 5.8
35gb|AC015687.11| Homo sapiens chromosome , clone RP11-18M5, compl... 40 5.8
36gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence 40 5.8
37gb|AC009808.8| Homo sapiens chromosome 8, clone RP11-138K8, comp... 40 5.8
38emb|BX323593.12| Zebrafish DNA sequence from clone DKEY-107I18 i... 40 5.8
39gb|AC147274.3| Pan troglodytes BAC clone RP43-113D16 from chromo... 40 5.8
40gb|AC122311.6| Mus musculus BAC clone RP23-298B23 from chromosom... 40 5.8
41gb|AC107027.9| Homo sapiens 3 BAC RP11-517B11 (Roswell Park Canc... 40 5.8
42dbj|BS000065.1| Pan troglodytes chromosome 22 clone:RP43-042H09,... 40 5.8
43gb|AC005188.1|AC005188 Homo sapiens PAC clone RP1-17P5 from 5q31... 40 5.8
44gb|AC004701.1|AC004701 Homo sapiens chromosome 4 clone B331M8 ma... 40 5.8
45emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14,... 40 5.8
46gb|AF020503.1|AF020503 Homo sapiens FRA3B common fragile region,... 40 5.8
47gb|AC171002.2| Mus musculus BAC clone RP23-145F22 from chromosom... 40 5.8
48emb|AL831786.7| Mouse DNA sequence from clone RP23-177C18 on chr... 40 5.8 
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete
             sequence
          Length = 138345

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 68/80 (85%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                         
Query: 315   ctcccagatagaagattatcactaaaagagaacaactaattagtcttggtagatgaaatc 374
             |||||||||||||||||| || | || ||| ||||||| |||| ||| |||| |||   |
Sbjct: 64573 ctcccagatagaagattaccattgaaggagcacaacta-ttagccttcgtagctgaggac 64631

                                 
Query: 375   agattgtgtactgacattgt 394
             ||||||||||||||||||||
Sbjct: 64632 agattgtgtactgacattgt 64651
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 68/80 (85%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                            
Query: 315      ctcccagatagaagattatcactaaaagagaacaactaattagtcttggtagatgaaatc 374
                |||||||||||||||||| || | || ||| ||||||| |||| ||| |||| |||   |
Sbjct: 27364366 ctcccagatagaagattaccattgaaggagcacaacta-ttagccttcgtagctgaggac 27364424

                                    
Query: 375      agattgtgtactgacattgt 394
                ||||||||||||||||||||
Sbjct: 27364425 agattgtgtactgacattgt 27364444
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 68/80 (85%), Gaps = 1/80 (1%)
 Strand = Plus / Plus

                                                                            
Query: 315      ctcccagatagaagattatcactaaaagagaacaactaattagtcttggtagatgaaatc 374
                |||||||||||||||||| || | || ||| ||||||| |||| ||| |||| |||   |
Sbjct: 27455689 ctcccagatagaagattaccattgaaggagcacaacta-ttagccttcgtagctgaggac 27455747

                                    
Query: 375      agattgtgtactgacattgt 394
                ||||||||||||||||||||
Sbjct: 27455748 agattgtgtactgacattgt 27455767
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>gb|AE014832.1| Plasmodium falciparum 3D7 chromosome 10 section 4 of 7 of the complete
             sequence
          Length = 258658

 Score = 48.1 bits (24), Expect = 0.024
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 270   attcagaaaaattattttttcttt 293
             ||||||||||||||||||||||||
Sbjct: 52067 attcagaaaaattattttttcttt 52090
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>gb|AC090707.16| Homo sapiens chromosome 11, clone RP11-701I24, complete sequence
          Length = 185029

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 276    aaaaattattttttctttgtt 296
              |||||||||||||||||||||
Sbjct: 165536 aaaaattattttttctttgtt 165556
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>gb|AC135849.6| Pan troglodytes clone ptb-33n14, complete sequence
          Length = 72820

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 276   aaaaattattttttctttgtt 296
             |||||||||||||||||||||
Sbjct: 15285 aaaaattattttttctttgtt 15305
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>dbj|AK057101.1| Homo sapiens cDNA FLJ32539 fis, clone SMINT2000518
          Length = 2324

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 276 aaaaattattttttctttgtt 296
           |||||||||||||||||||||
Sbjct: 113 aaaaattattttttctttgtt 133
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>gb|AC000085.5| Homo sapiens Chromosome 22q11.2 BAC Clone 72f8 In DGCR Region, complete
             sequence
          Length = 100152

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 276   aaaaattattttttctttgtt 296
             |||||||||||||||||||||
Sbjct: 78543 aaaaattattttttctttgtt 78523
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>gb|AC000073.1| Homo sapiens Chromosome 22q11.2 Cosmid Clone 19d3 In DGCR Region,
             complete sequence
          Length = 39706

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 276   aaaaattattttttctttgtt 296
             |||||||||||||||||||||
Sbjct: 14557 aaaaattattttttctttgtt 14537
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>dbj|AP003035.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-482L11, complete
             sequence
          Length = 170638

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 276   aaaaattattttttctttgtt 296
             |||||||||||||||||||||
Sbjct: 40214 aaaaattattttttctttgtt 40194
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>gb|AF201337.4| Homo sapiens chromosome 8 clone GS1-44D20 map q13.3, complete sequence
          Length = 93479

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   aaaaattattttttctttgt 295
             ||||||||||||||||||||
Sbjct: 64392 aaaaattattttttctttgt 64411
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>gb|AC147056.3| Pan troglodytes BAC clone RP43-153F5 from 7, complete sequence
          Length = 167738

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    aaaaattattttttctttgt 295
              ||||||||||||||||||||
Sbjct: 167239 aaaaattattttttctttgt 167220
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>emb|Z82267.1|CEF38C2 Caenorhabditis elegans Cosmid F38C2, complete sequence
          Length = 33869

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 275  gaaaaattattttttctttgttac 298
            ||||||||||||||| ||||||||
Sbjct: 3678 gaaaaattattttttatttgttac 3701
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>gb|AC125245.4| Homo sapiens BAC clone RP11-236P13 from 4, complete sequence
          Length = 135923

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   aaaaattattttttctttgt 295
             ||||||||||||||||||||
Sbjct: 17696 aaaaattattttttctttgt 17677
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>gb|AC013470.10| Homo sapiens BAC clone RP11-472F21 from 7, complete sequence
          Length = 170723

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 278    aaattattttttctttgtta 297
              ||||||||||||||||||||
Sbjct: 147342 aaattattttttctttgtta 147361
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>emb|AL592044.4| Human DNA sequence from clone RP13-407F1 on chromosome 13, complete
              sequence
          Length = 236130

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 277    aaaattattttttctttgtt 296
              ||||||||||||||||||||
Sbjct: 226651 aaaattattttttctttgtt 226632
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>emb|AL590653.11| Human DNA sequence from clone RP11-142B3 on chromosome 1 Contains part of
              the gene for melanoma antigen recognized by T cells 2
              protein (MART2), complete sequence
          Length = 116103

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    aaaaattattttttctttgt 295
              ||||||||||||||||||||
Sbjct: 105813 aaaaattattttttctttgt 105832
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>emb|AL513328.12| Human DNA sequence from clone RP13-461N9 on chromosome 9 Contains the
             5' end of the MUSK gene for muscle, skeletal, receptor
             tyrosine kinase and a ribosomal protein S21 (RPS21)
             pseudogene, complete sequence
          Length = 126999

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   aaaaattattttttctttgt 295
             ||||||||||||||||||||
Sbjct: 78166 aaaaattattttttctttgt 78147
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>emb|AL365508.19| Human DNA sequence from clone RP11-301B7 on chromosome 6 Contains part
             of the gene for a novel protein highly similar to
             FLJ30899, complete sequence
          Length = 96315

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   aaaaattattttttctttgt 295
             ||||||||||||||||||||
Sbjct: 52071 aaaaattattttttctttgt 52090
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>emb|AL357559.16| Human DNA sequence from clone RP11-393M18 on chromosome 1 Contains a
              novel pseudogene, a farnesyl diphosphate synthase (farnesyl
              pyrophosphate synthetase, dimethylallyltranstransferase,
              geranyltranstransferase) (FDPS) pseudogene, a novel gene
              (LOC339476) and the 5' end of a solute carrier family 4
              (anion exchanger) member 1 adaptor protein (SLC4A1AP)
              pseudogene, complete sequence
          Length = 190912

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 273    cagaaaaattattttttctt 292
              ||||||||||||||||||||
Sbjct: 155975 cagaaaaattattttttctt 155956
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>emb|AL356791.9| Human DNA sequence from clone RP11-80I3 on chromosome 9, complete
             sequence
          Length = 101157

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 273   cagaaaaattattttttctt 292
             ||||||||||||||||||||
Sbjct: 56420 cagaaaaattattttttctt 56439
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>emb|AL353651.11| Human DNA sequence from clone RP4-726F1 on chromosome 1p31.1-31.3
             Contains a novel gene, complete sequence
          Length = 92141

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 111   attactgaatgacataatat 130
             ||||||||||||||||||||
Sbjct: 58760 attactgaatgacataatat 58779
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>emb|AL136363.4| Human DNA sequence from clone RP6-43L17 on chromosome Xq21.1-21.33,
             complete sequence
          Length = 93296

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 277   aaaattattttttctttgtt 296
             ||||||||||||||||||||
Sbjct: 41313 aaaattattttttctttgtt 41294
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>gb|AC126957.4| Rattus norvegicus 1 BAC CH230-12B13 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 215911

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 390    attgtggtaatctctgtatcctat 413
              |||||||| |||||||||||||||
Sbjct: 104126 attgtggttatctctgtatcctat 104103
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>gb|AC092982.3| Homo sapiens 3q BAC RP11-758I14 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 189219

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 270   attcagaaaaattattttttcttt 293
             |||||||||| |||||||||||||
Sbjct: 41287 attcagaaaatttattttttcttt 41264
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>gb|AC131949.1| Homo sapiens BAC clone RP11-240J11 from 4, complete sequence
          Length = 65210

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 277 aaaattattttttctttgtt 296
           ||||||||||||||||||||
Sbjct: 305 aaaattattttttctttgtt 286
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>ref|NM_001001276.1| Rattus norvegicus olfactory receptor 377 (predicted)
           (Olr377_predicted), mRNA
          Length = 945

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 390 attgtggtaatctctgtatcctat 413
           |||||||| |||||||||||||||
Sbjct: 631 attgtggttatctctgtatcctat 654
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>gb|AC108732.11| Homo sapiens 3 BAC RP11-812P15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 26391

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   aaaaattattttttctttgt 295
             ||||||||||||||||||||
Sbjct: 24747 aaaaattattttttctttgt 24728
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>gb|AC090082.3| Homo sapiens chromosome 8, clone CTD-2294B10, complete sequence
          Length = 99486

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   aaaaattattttttctttgt 295
             ||||||||||||||||||||
Sbjct: 66135 aaaaattattttttctttgt 66116
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>gb|AC116424.1| Homo sapiens 3 BAC RP11-265F19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 60398

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 276   aaaaattattttttctttgt 295
             ||||||||||||||||||||
Sbjct: 55401 aaaaattattttttctttgt 55382
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>gb|AC109439.3| Homo sapiens chromosome 5 clone CTB-1I21, complete sequence
          Length = 153667

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   aaaaattattttttctttgt 295
             ||||||||||||||||||||
Sbjct: 92674 aaaaattattttttctttgt 92693
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>gb|AC084758.3| Homo sapiens chromosome 15 clone RP11-348A14 map 15q21.1, complete
              sequence
          Length = 192074

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 270    attcagaaaaattattttttcttt 293
              ||||||||||| ||||||||||||
Sbjct: 175098 attcagaaaaagtattttttcttt 175075
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>dbj|AK140742.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched
           library, clone:C130001A21 product:hypothetical protein,
           full insert sequence
          Length = 2722

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 274 agaaaaattattttttcttt 293
           ||||||||||||||||||||
Sbjct: 353 agaaaaattattttttcttt 334
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>gb|AC034154.6| Homo sapiens BAC clone RP11-242D9 from 4, complete sequence
          Length = 210563

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 277 aaaattattttttctttgtt 296
           ||||||||||||||||||||
Sbjct: 769 aaaattattttttctttgtt 788
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>gb|AC015687.11| Homo sapiens chromosome , clone RP11-18M5, complete sequence
          Length = 188571

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    aaaaattattttttctttgt 295
              ||||||||||||||||||||
Sbjct: 137537 aaaaattattttttctttgt 137556
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>gb|AC013799.6| Homo sapiens, clone RP11-20J1, complete sequence
          Length = 186076

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   agaaaaattattttttcttt 293
             ||||||||||||||||||||
Sbjct: 72528 agaaaaattattttttcttt 72547
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>gb|AC009808.8| Homo sapiens chromosome 8, clone RP11-138K8, complete sequence
          Length = 173805

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    aaaaattattttttctttgt 295
              ||||||||||||||||||||
Sbjct: 117968 aaaaattattttttctttgt 117987
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>emb|BX323593.12| Zebrafish DNA sequence from clone DKEY-107I18 in linkage group 14,
             complete sequence
          Length = 198776

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 337   taaaagagaacaactaatta 356
             ||||||||||||||||||||
Sbjct: 31252 taaaagagaacaactaatta 31271
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>gb|AC147274.3| Pan troglodytes BAC clone RP43-113D16 from chromosome 7, complete
             sequence
          Length = 168606

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 278   aaattattttttctttgtta 297
             ||||||||||||||||||||
Sbjct: 48932 aaattattttttctttgtta 48913
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>gb|AC122311.6| Mus musculus BAC clone RP23-298B23 from chromosome 6, complete sequence
          Length = 209435

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 255   tgcatagaattaatgattcagaaa 278
             |||| |||||||||||||||||||
Sbjct: 75846 tgcacagaattaatgattcagaaa 75823
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>gb|AC107027.9| Homo sapiens 3 BAC RP11-517B11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 171562

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 276    aaaaattattttttctttgt 295
              ||||||||||||||||||||
Sbjct: 171294 aaaaattattttttctttgt 171313
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>dbj|BS000065.1| Pan troglodytes chromosome 22 clone:RP43-042H09, map 22, complete
             sequences
          Length = 154519

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   agaaaaattattttttcttt 293
             ||||||||||||||||||||
Sbjct: 78180 agaaaaattattttttcttt 78161
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>gb|AC005188.1|AC005188 Homo sapiens PAC clone RP1-17P5 from 5q31, complete sequence
          Length = 114918

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 276    aaaaattattttttctttgt 295
              ||||||||||||||||||||
Sbjct: 112379 aaaaattattttttctttgt 112360
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>gb|AC004701.1|AC004701 Homo sapiens chromosome 4 clone B331M8 map 4q25, complete sequence
          Length = 143839

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 274   agaaaaattattttttcttt 293
             ||||||||||||||||||||
Sbjct: 53323 agaaaaattattttttcttt 53342
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>emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14, complete sequence
          Length = 151729

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 229   catattcctatttgaatgat 248
             ||||||||||||||||||||
Sbjct: 36518 catattcctatttgaatgat 36499
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>gb|AF020503.1|AF020503 Homo sapiens FRA3B common fragile region, diadenosine triphosphate
             hydrolase (FHIT) gene, exon 5
          Length = 206880

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   agaaaaattattttttcttt 293
             ||||||||||||||||||||
Sbjct: 77172 agaaaaattattttttcttt 77153
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>gb|AC171002.2| Mus musculus BAC clone RP23-145F22 from chromosome 6, complete sequence
          Length = 186846

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 255    tgcatagaattaatgattcagaaa 278
              |||| |||||||||||||||||||
Sbjct: 151599 tgcacagaattaatgattcagaaa 151576
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>emb|AL831786.7| Mouse DNA sequence from clone RP23-177C18 on chromosome 4, complete
             sequence
          Length = 80871

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   agaaaaattattttttcttt 293
             ||||||||||||||||||||
Sbjct: 68182 agaaaaattattttttcttt 68163


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,553,740
Number of Sequences: 3902068
Number of extensions: 4553740
Number of successful extensions: 104049
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103849
Number of HSP's gapped (non-prelim): 197
length of query: 434
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 412
effective length of database: 17,147,199,772
effective search space: 7064646306064
effective search space used: 7064646306064
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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