ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal8b08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domai... 30 1.1
2MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domai... 30 1.4
3PSPD_ECOLI (P0AFV8) Phage shock protein D 29 2.4
4PSPD_ECO57 (P0AFV9) Phage shock protein D 29 2.4
5SDG41_ARATH (Q3ECY6) Protein SET DOMAIN GROUP 41 29 3.2
6O1038_MOUSE (Q8VGS1) Olfactory receptor 1038 (Olfactory receptor... 28 5.4
7SCONB_EMENI (Q00659) Sulfur metabolite repression control protein 27 9.3
8ACBC_ACTS5 (Q9ZAE9) 2-epi-5-epi-valiolone synthase (EC 4.2.3.-) ... 27 9.3
9CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor... 27 9.3
10CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor... 27 9.3

>MEGF8_MOUSE (P60882) Multiple epidermal growth factor-like domains 8 (EGF-like|
           domain-containing protein 4) (Multiple EGF-like domain
           protein 4)
          Length = 2330

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 142 CRRAGSGNGEIKREKRRPSLLSQAVGLEPILGKXSSC 32
           C R G G G +K  +  P L SQ +  E  L   S C
Sbjct: 471 CSRRGRGRGALKNPEECPPLCSQRLTCEDCLANSSQC 507



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>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like|
           domain-containing protein 4) (Multiple EGF-like domain
           protein 4)
          Length = 2386

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 14/37 (37%), Positives = 17/37 (45%)
 Frame = -1

Query: 142 CRRAGSGNGEIKREKRRPSLLSQAVGLEPILGKXSSC 32
           C R G G G +K  +  P L SQ +  E  L   S C
Sbjct: 471 CSRRGRGRGALKSPEECPPLCSQRLTCEDCLANSSQC 507



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>PSPD_ECOLI (P0AFV8) Phage shock protein D|
          Length = 73

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 133 AGSGNGEIKREKRRPSLLSQAVGLEPILGKXSSCL*SRWK 14
           AG     IK   RRP  +  AV LEP+L + ++ L  R+K
Sbjct: 33  AGVAGWAIKSVARRPLKMLLAVALEPLLSRAANKLAQRYK 72



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>PSPD_ECO57 (P0AFV9) Phage shock protein D|
          Length = 73

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 133 AGSGNGEIKREKRRPSLLSQAVGLEPILGKXSSCL*SRWK 14
           AG     IK   RRP  +  AV LEP+L + ++ L  R+K
Sbjct: 33  AGVAGWAIKSVARRPLKMLLAVALEPLLSRAANKLAQRYK 72



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>SDG41_ARATH (Q3ECY6) Protein SET DOMAIN GROUP 41|
          Length = 558

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/83 (22%), Positives = 35/83 (42%), Gaps = 6/83 (7%)
 Frame = -1

Query: 244 CYNYMYKRYEYMELDYTRHKLIMNITIHQYIQSPCRRAGSGNG------EIKREKRRPSL 83
           CY ++  R  Y ++  T  +   N+ + + +      +G+GNG       IKR K    +
Sbjct: 185 CYRFVNNRTSYHDVHVTNTETSSNLELQEQVCGTSLNSGNGNGPKLIVRSIKRIKSGEEI 244

Query: 82  LSQAVGLEPILGKXSSCL*SRWK 14
               + L    G   S L S+++
Sbjct: 245 TVSYIDLLQPTGLRQSDLWSKYR 267



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>O1038_MOUSE (Q8VGS1) Olfactory receptor 1038 (Olfactory receptor 185-3)|
          Length = 319

 Score = 28.1 bits (61), Expect = 5.4
 Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 18/109 (16%)
 Frame = +1

Query: 1   VDXCSSNGITSKMXISLGWVLGRQLGIARMDVVFLV*FRRCRTLLFYMVTECI------- 159
           VD C S+ IT KM ++          + R  + F     +    L +M+TEC        
Sbjct: 69  VDLCYSSAITPKMMVNFV--------VERNTIPFHACATQLGCFLTFMITECFLLASMAY 120

Query: 160 --DVL*CS*L---------ACGECNPIPYTHIFCTCSCNNIHSFKTTRC 273
              V  CS L          C +   +PY + F     + I +F+ T C
Sbjct: 121 DRYVAICSPLHYSTLMSKRVCIQLVAVPYVYSFLVALFHTIITFRLTYC 169



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>SCONB_EMENI (Q00659) Sulfur metabolite repression control protein|
          Length = 678

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
 Frame = -2

Query: 360 DVTIIVLKCNTEDGILTLFLHEGLDRDESASRC--FEGMDIVTTTCTKDMSIWNWITLAT 187
           D TI +    T + + TL  HE      S  RC  F+   +++ +  + + +WNW     
Sbjct: 368 DTTIKIWDTETGEELRTLRGHE------SGIRCLQFDDTKLISGSMDRTIKVWNWR---- 417

Query: 186 S*S*TSQYINTFSHH 142
               T + I+T++ H
Sbjct: 418 ----TGECISTYTGH 428



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>ACBC_ACTS5 (Q9ZAE9) 2-epi-5-epi-valiolone synthase (EC 4.2.3.-)|
           (Sedo-heptulose 7-phosphate cyclase)
          Length = 382

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 6/37 (16%)
 Frame = +3

Query: 57  GSRPTAWDSK------DGRRFSRLISPLPDPALLHGD 149
           G+RP  W+S+       G  FS  I     PALLHG+
Sbjct: 256 GTRPNLWESRLERSVDYGHTFSPTIEMRALPALLHGE 292



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>CELR3_MOUSE (Q91ZI0) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
          Length = 3301

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 21/62 (33%), Positives = 28/62 (45%)
 Frame = +2

Query: 131  CSSTW*LNVLMYCDVHD*LVASVIQFHILISFVHVVVTISIPSKQRDALSSLSRPSCKNK 310
            CS T    VLM     + L   +    +L  F HVVV +S+ +    A   LS  S K+ 
Sbjct: 2505 CSRTGTFGVLMDASPRERLEGDL---ELLAVFTHVVVAVSVTALVLTAAVLLSLRSLKSN 2561

Query: 311  VR 316
            VR
Sbjct: 2562 VR 2563



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>CELR3_HUMAN (Q9NYQ7) Cadherin EGF LAG seven-pass G-type receptor 3 precursor|
            (Flamingo homolog 1) (hFmi1) (Multiple epidermal growth
            factor-like domains 2) (Epidermal growth factor-like 1)
          Length = 3312

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 21/62 (33%), Positives = 28/62 (45%)
 Frame = +2

Query: 131  CSSTW*LNVLMYCDVHD*LVASVIQFHILISFVHVVVTISIPSKQRDALSSLSRPSCKNK 310
            CS T    VLM     + L   +    +L  F HVVV +S+ +    A   LS  S K+ 
Sbjct: 2514 CSRTGTFGVLMDASPRERLEGDL---ELLAVFTHVVVAVSVAALVLTAAILLSLRSLKSN 2570

Query: 311  VR 316
            VR
Sbjct: 2571 VR 2572


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,675,514
Number of Sequences: 219361
Number of extensions: 1056979
Number of successful extensions: 2543
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2469
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2543
length of database: 80,573,946
effective HSP length: 99
effective length of database: 58,857,207
effective search space used: 1412572968
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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