ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7k13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK070682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
2gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome ... 66 1e-07
3gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome... 66 1e-07
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 66 1e-07
5dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
6dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
7dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
8ref|NM_001036286.1| Arabidopsis thaliana auxin:hydrogen symporte... 46 0.14
9ref|NM_201750.2| Arabidopsis thaliana auxin:hydrogen symporter A... 46 0.14
10ref|NM_179633.2| Arabidopsis thaliana auxin:hydrogen symporter A... 46 0.14
11ref|NM_127304.2| Arabidopsis thaliana auxin:hydrogen symporter A... 46 0.14
12emb|BX819980.1|CNS0AA6Y Arabidopsis thaliana Full-length cDNA Co... 46 0.14
13emb|BX820250.1|CNS0A8MZ Arabidopsis thaliana Full-length cDNA Co... 46 0.14
14emb|BX820270.1|CNS0A7WG Arabidopsis thaliana Full-length cDNA Co... 46 0.14
15gb|AY084347.1| Arabidopsis thaliana clone 105072 mRNA, complete ... 46 0.14
16gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 44 0.53
17gb|AC074257.5| Homo sapiens BAC clone RP11-796I2 from 7, complet... 44 0.53
18gb|AC093583.3| Homo sapiens BAC clone RP13-452N2 from 7, complet... 44 0.53
19gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1)... 44 0.53
20gb|AY389779.1| Hyacinthus orientalis unknown mRNA 42 2.1
21gb|AY336593.1| Eurylaimus ochromalus glyceraldehyde-3-phosphate ... 42 2.1
22gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 8.3
23gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 8.3
24gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, com... 40 8.3
25gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome... 40 8.3
26ref|XM_814779.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 8.3
27emb|CR732553.1|CNS0GS6M Tetraodon nigroviridis full-length cDNA 40 8.3
28emb|CR732456.1|CNS0GS3X Tetraodon nigroviridis full-length cDNA 40 8.3
29emb|CR730144.2|CNS0GQBQ Tetraodon nigroviridis full-length cDNA 40 8.3
30emb|CR728105.2|CNS0GOR3 Tetraodon nigroviridis full-length cDNA 40 8.3
31emb|CR727382.2|CNS0GO70 Tetraodon nigroviridis full-length cDNA 40 8.3
32emb|CR726999.2|CNS0GNWD Tetraodon nigroviridis full-length cDNA 40 8.3
33emb|CR723826.2|CNS0GLG8 Tetraodon nigroviridis full-length cDNA 40 8.3
34emb|CR682093.2|CNS0FP95 Tetraodon nigroviridis full-length cDNA 40 8.3
35emb|CR681026.2|CNS0FOFI Tetraodon nigroviridis full-length cDNA 40 8.3
36emb|CR655571.2|CNS0F4T5 Tetraodon nigroviridis full-length cDNA 40 8.3
37emb|CR654706.2|CNS0F454 Tetraodon nigroviridis full-length cDNA 40 8.3
38emb|CR653898.2|CNS0F3IO Tetraodon nigroviridis full-length cDNA 40 8.3
39emb|CR651694.2|CNS0F1TG Tetraodon nigroviridis full-length cDNA 40 8.3
40emb|CR649728.2|CNS0F0AU Tetraodon nigroviridis full-length cDNA 40 8.3
41gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 8.3
42emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2 40 8.3
43emb|AL645606.22| Mouse DNA sequence from clone RP23-374K2 on chr... 40 8.3
44ref|NM_137750.1| Drosophila melanogaster CG10321-RA (CG10321), mRNA 40 8.3
45gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57... 40 8.3
46gb|AC009912.5|AC009912 Drosophila melanogaster, chromosome 2R, r... 40 8.3
47emb|BX255948.4| Zebrafish DNA sequence from clone CH211-250J1, c... 40 8.3
48emb|BX248087.9| Zebrafish DNA sequence from clone CH211-191J22, ... 40 8.3
49gb|BT003241.1| Drosophila melanogaster LD45439 full insert cDNA 40 8.3
50emb|AL390801.4|CNS06C7S Human chromosome 14 DNA sequence BAC R-7... 40 8.3
51gb|AC005871.3|AC005871 citb_109_p_11, complete sequence 40 8.3
52gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62... 40 8.3
53gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, com... 40 8.3
54gb|AE001826.1| Deinococcus radiodurans R1 plasmid MP1, complete ... 40 8.3
55gb|DQ138790.1| Drosophila simulans strain Ky-b CG10321 gene, par... 40 8.3
56gb|DQ138789.1| Drosophila simulans strain Ky-a CG10321 gene, par... 40 8.3
57gb|DQ138788.1| Drosophila melanogaster strain Ral1 CG10321 gene,... 40 8.3 
>dbj|AK070682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B02, full
           insert sequence
          Length = 1913

 Score =  174 bits (88), Expect = 2e-40
 Identities = 340/424 (80%)
 Strand = Plus / Plus

                                                                       
Query: 176 aagatgggcttcttgtcgctgctcgtggtggcatccatgcccatcgtccaggtcctgctc 235
           |||||||||||||||||  ||||  | ||||| || ||||| ||||| |||||||| |||
Sbjct: 79  aagatgggcttcttgtcattgcttcttgtggcttctatgccaatcgttcaggtcctactc 138

                                                                       
Query: 236 atcggcgtcatcggagccttcctcgcctctggttacagcaaggttttcaccgccagcgcc 295
           || || || || ||||| || ||||| ||||||||||||||  || | ||| | ||||| 
Sbjct: 139 ataggtgttattggagcttttctcgcttctggttacagcaaaattctaacctcaagcgct 198

                                                                       
Query: 296 cgcagggacatgaacaaggttgtttttacagtcttcaccccatcgctcatcttcgccaac 355
           |  ||||| ||||||||||||||||| || |||||||| ||||| || || || || | |
Sbjct: 199 ctaagggatatgaacaaggttgttttcactgtcttcacaccatccctgatgtttgctagc 258

                                                                       
Query: 356 ctcgccaagacggtcacgctgtccgacgtcatctcctggtggttcatgccggtgaacata 415
           || || ||||||||||| || || |||||||| || |||||||| ||||| || || |||
Sbjct: 259 ctggctaagacggtcacactttctgacgtcatttcttggtggtttatgccagttaatata 318

                                                                       
Query: 416 gcaatcacattcctggttggcagtgctctaggctggctagcgtgcaagatcctgaaaccg 475
           | |||||||||| | |||||  |  ||||||||||| |||| || || || |||||||| 
Sbjct: 319 ggaatcacattcattgttggtggcactctaggctggatagcatgtaaaatactgaaacca 378

                                                                       
Query: 476 ccgcagcattttcgtggccttatcatggccttctgctcagcaggaaacctcggcaacctg 535
           || |||||||| || ||  | ||||| |||||||| ||||||||||| || |||||| ||
Sbjct: 379 ccacagcatttccgaggaatgatcattgccttctgttcagcaggaaatcttggcaacttg 438

                                                                       
Query: 536 ctgctgatcgtcgtcccggctgtctgcgacgaagatggcaacccgtttgggaacgatcgg 595
           ||  ||||| | || || || ||||| |||||||| ||||||||||| || || || |||
Sbjct: 439 ctcttgatcattgttccagcagtctgtgacgaagacggcaacccgttcggaaaagaccgg 498

               
Query: 596 agcc 599
           ||||
Sbjct: 499 agcc 502
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>gb|AC137593.2| Oryza sativa (Japonica cultiva-group) chromosome 9 BAC clone
            OSJNBa0043I04, complete sequence
          Length = 145191

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                        
Query: 176  aagatgggcttcttgtcgctgctcgtggtggcatccatgcccatcgtccaggtcctgctc 235
            |||||||||||||||||  ||||  | ||||| || ||||| ||||| |||||||| |||
Sbjct: 9704 aagatgggcttcttgtcattgcttcttgtggcttctatgccaatcgttcaggtcctactc 9763

                                                     
Query: 236  atcggcgtcatcggagccttcctcgcctctggttacagcaa 276
            || || || || ||||| || ||||| ||||||||||||||
Sbjct: 9764 ataggtgttattggagcttttctcgcttctggttacagcaa 9804



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                         
Query: 515   gcaggaaacctcggcaacctgctgctgatcgtcgtcccggctgtctgcgacgaagatggc 574
             |||||||| || |||||| |||| ||||| || ||||| || ||||| ||||||||||||
Sbjct: 52976 gcaggaaatcttggcaacttgctcctgattgttgtcccagcagtctgtgacgaagatggc 53035

                     
Query: 575   aacccgtt 582
             ||||||||
Sbjct: 53036 aacccgtt 53043



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 102/127 (80%)
 Strand = Plus / Plus

                                                                         
Query: 393   ggtggttcatgccggtgaacatagcaatcacattcctggttggcagtgctctaggctggc 452
             ||||||| ||||| || || |||| |||||||||| | |||||  |  ||||||||||| 
Sbjct: 10267 ggtggtttatgccagttaatataggaatcacattcattgttggtggcactctaggctgga 10326

                                                                         
Query: 453   tagcgtgcaagatcctgaaaccgccgcagcattttcgtggccttatcatggccttctgct 512
             |||| || || || |||||||| || |||||||| || ||  | ||||| |||||||| |
Sbjct: 10327 tagcatgtaaaatactgaaaccaccacagcatttccgaggaatgatcattgccttctgtt 10386

                    
Query: 513   cagcagg 519
             |||||||
Sbjct: 10387 cagcagg 10393



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                         
Query: 515   gcaggaaacctcggcaacctgctgctgatcgtcgtcccggctgtctgcgacgaagatggc 574
             |||||||| || |||||| ||||  ||||| | || || || ||||| |||||||| |||
Sbjct: 10722 gcaggaaatcttggcaacttgctcttgatcattgttccagcagtctgtgacgaagacggc 10781

                                      
Query: 575   aacccgtttgggaacgatcggagcc 599
             |||||||| || || || |||||||
Sbjct: 10782 aacccgttcggaaaagaccggagcc 10806



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                         
Query: 312   aggttgtttttacagtcttcaccccatcgctcatcttcgccaacctcgccaagacggtca 371
             |||||||||| || |||||||| ||||| || || || || | ||| || ||||||||||
Sbjct: 9922  aggttgttttcactgtcttcacaccatccctgatgtttgctagcctggctaagacggtca 9981

                                      
Query: 372   cgctgtccgacgtcatctcctggtg 396
             | || || |||||||| || |||||
Sbjct: 9982  cactttctgacgtcatttcttggtg 10006



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                         
Query: 201   tggtggcatccatgcccatcgtccaggtcctgctcatcggcgtcatcggagccttcctcg 260
             ||||||| || |||||  |||||||||| || ||||| || ||  | ||||| || ||||
Sbjct: 52160 tggtggcttcaatgccagtcgtccaggtgctactcataggtgttgttggagcttttctcg 52219

                             
Query: 261   cctctggttacagcaa 276
             | ||||||||||||||
Sbjct: 52220 cttctggttacagcaa 52235
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>gb|AC137596.2| Oryza sativa (japonica cultivar-group) chromosome 9 clone OSJNBb0031H05,
              complete sequence
          Length = 141200

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                          
Query: 176    aagatgggcttcttgtcgctgctcgtggtggcatccatgcccatcgtccaggtcctgctc 235
              |||||||||||||||||  ||||  | ||||| || ||||| ||||| |||||||| |||
Sbjct: 120310 aagatgggcttcttgtcattgcttcttgtggcttctatgccaatcgttcaggtcctactc 120369

                                                       
Query: 236    atcggcgtcatcggagccttcctcgcctctggttacagcaa 276
              || || || || ||||| || ||||| ||||||||||||||
Sbjct: 120370 ataggtgttattggagcttttctcgcttctggttacagcaa 120410



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 102/127 (80%)
 Strand = Plus / Plus

                                                                          
Query: 393    ggtggttcatgccggtgaacatagcaatcacattcctggttggcagtgctctaggctggc 452
              ||||||| ||||| || || |||| |||||||||| | |||||  |  ||||||||||| 
Sbjct: 120873 ggtggtttatgccagttaatataggaatcacattcattgttggtggcactctaggctgga 120932

                                                                          
Query: 453    tagcgtgcaagatcctgaaaccgccgcagcattttcgtggccttatcatggccttctgct 512
              |||| || || || |||||||| || |||||||| || ||  | ||||| |||||||| |
Sbjct: 120933 tagcatgtaaaatactgaaaccaccacagcatttccgaggaatgatcattgccttctgtt 120992

                     
Query: 513    cagcagg 519
              |||||||
Sbjct: 120993 cagcagg 120999



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                          
Query: 515    gcaggaaacctcggcaacctgctgctgatcgtcgtcccggctgtctgcgacgaagatggc 574
              |||||||| || |||||| ||||  ||||| | || || || ||||| |||||||| |||
Sbjct: 121328 gcaggaaatcttggcaacttgctcttgatcattgttccagcagtctgtgacgaagacggc 121387

                                       
Query: 575    aacccgtttgggaacgatcggagcc 599
              |||||||| || || || |||||||
Sbjct: 121388 aacccgttcggaaaagaccggagcc 121412



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                          
Query: 312    aggttgtttttacagtcttcaccccatcgctcatcttcgccaacctcgccaagacggtca 371
              |||||||||| || |||||||| ||||| || || || || | ||| || ||||||||||
Sbjct: 120528 aggttgttttcactgtcttcacaccatccctgatgtttgctagcctggctaagacggtca 120587

                                       
Query: 372    cgctgtccgacgtcatctcctggtg 396
              | || || |||||||| || |||||
Sbjct: 120588 cactttctgacgtcatttcttggtg 120612
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 84/101 (83%)
 Strand = Plus / Plus

                                                                            
Query: 176      aagatgggcttcttgtcgctgctcgtggtggcatccatgcccatcgtccaggtcctgctc 235
                |||||||||||||||||  ||||  | ||||| || ||||| ||||| |||||||| |||
Sbjct: 21663684 aagatgggcttcttgtcattgcttcttgtggcttctatgccaatcgttcaggtcctactc 21663743

                                                         
Query: 236      atcggcgtcatcggagccttcctcgcctctggttacagcaa 276
                || || || || ||||| || ||||| ||||||||||||||
Sbjct: 21663744 ataggtgttattggagcttttctcgcttctggttacagcaa 21663784



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                            
Query: 515      gcaggaaacctcggcaacctgctgctgatcgtcgtcccggctgtctgcgacgaagatggc 574
                |||||||| || |||||| |||| ||||| || ||||| || ||||| ||||||||||||
Sbjct: 21706956 gcaggaaatcttggcaacttgctcctgattgttgtcccagcagtctgtgacgaagatggc 21707015

                        
Query: 575      aacccgtt 582
                ||||||||
Sbjct: 21707016 aacccgtt 21707023



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 102/127 (80%)
 Strand = Plus / Plus

                                                                            
Query: 393      ggtggttcatgccggtgaacatagcaatcacattcctggttggcagtgctctaggctggc 452
                ||||||| ||||| || || |||| |||||||||| | |||||  |  ||||||||||| 
Sbjct: 21664247 ggtggtttatgccagttaatataggaatcacattcattgttggtggcactctaggctgga 21664306

                                                                            
Query: 453      tagcgtgcaagatcctgaaaccgccgcagcattttcgtggccttatcatggccttctgct 512
                |||| || || || |||||||| || |||||||| || ||  | ||||| |||||||| |
Sbjct: 21664307 tagcatgtaaaatactgaaaccaccacagcatttccgaggaatgatcattgccttctgtt 21664366

                       
Query: 513      cagcagg 519
                |||||||
Sbjct: 21664367 cagcagg 21664373



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                            
Query: 515      gcaggaaacctcggcaacctgctgctgatcgtcgtcccggctgtctgcgacgaagatggc 574
                |||||||| || |||||| ||||  ||||| | || || || ||||| |||||||| |||
Sbjct: 21664702 gcaggaaatcttggcaacttgctcttgatcattgttccagcagtctgtgacgaagacggc 21664761

                                         
Query: 575      aacccgtttgggaacgatcggagcc 599
                |||||||| || || || |||||||
Sbjct: 21664762 aacccgttcggaaaagaccggagcc 21664786



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 69/85 (81%)
 Strand = Plus / Plus

                                                                            
Query: 312      aggttgtttttacagtcttcaccccatcgctcatcttcgccaacctcgccaagacggtca 371
                |||||||||| || |||||||| ||||| || || || || | ||| || ||||||||||
Sbjct: 21663902 aggttgttttcactgtcttcacaccatccctgatgtttgctagcctggctaagacggtca 21663961

                                         
Query: 372      cgctgtccgacgtcatctcctggtg 396
                | || || |||||||| || |||||
Sbjct: 21663962 cactttctgacgtcatttcttggtg 21663986



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 62/76 (81%)
 Strand = Plus / Plus

                                                                            
Query: 201      tggtggcatccatgcccatcgtccaggtcctgctcatcggcgtcatcggagccttcctcg 260
                ||||||| || |||||  |||||||||| || ||||| || ||  | ||||| || ||||
Sbjct: 21706140 tggtggcttcaatgccagtcgtccaggtgctactcataggtgttgttggagcttttctcg 21706199

                                
Query: 261      cctctggttacagcaa 276
                | ||||||||||||||
Sbjct: 21706200 cttctggttacagcaa 21706215
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                            
Query: 515      gcaggaaacctcggcaacctgctgctgatcgtcgtcccggctgtctgcgacgaagatggc 574
                |||||||| || |||||| |||| ||||| || ||||| || ||| | ||||||||||||
Sbjct: 11881092 gcaggaaatcttggcaacttgctcctgattgttgtcccagcagtccgtgacgaagatggc 11881151

                              
Query: 575      aacccgtttgggaa 588
                ||||||||| ||||
Sbjct: 11881152 aacccgtttcggaa 11881165
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>dbj|AP006343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1032F05
          Length = 151412

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 515    gcaggaaacctcggcaacctgctgctgatcgtcgtcccggctgtctgcgacgaagatggc 574
              |||||||| || |||||| |||| ||||| || ||||| || ||| | ||||||||||||
Sbjct: 113392 gcaggaaatcttggcaacttgctcctgattgttgtcccagcagtccgtgacgaagatggc 113451

                            
Query: 575    aacccgtttgggaa 588
              ||||||||| ||||
Sbjct: 113452 aacccgtttcggaa 113465
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>dbj|AP006529.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:B1114D08
          Length = 148354

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                         
Query: 515   gcaggaaacctcggcaacctgctgctgatcgtcgtcccggctgtctgcgacgaagatggc 574
             |||||||| || |||||| |||| ||||| || ||||| || ||| | ||||||||||||
Sbjct: 12133 gcaggaaatcttggcaacttgctcctgattgttgtcccagcagtccgtgacgaagatggc 12192

                           
Query: 575   aacccgtttgggaa 588
             ||||||||| ||||
Sbjct: 12193 aacccgtttcggaa 12206
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>ref|NM_001036286.1| Arabidopsis thaliana auxin:hydrogen symporter AT2G17500 transcript
           variant AT2G17500.4 mRNA, complete cds
          Length = 1627

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 384 tcatctcctggtggttcatgccggtgaacat 414
           ||||||| |||||||| ||||||||||||||
Sbjct: 354 tcatctcatggtggtttatgccggtgaacat 384
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>ref|NM_201750.2| Arabidopsis thaliana auxin:hydrogen symporter AT2G17500 transcript
           variant AT2G17500.3 mRNA, complete cds
          Length = 1638

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 384 tcatctcctggtggttcatgccggtgaacat 414
           ||||||| |||||||| ||||||||||||||
Sbjct: 365 tcatctcatggtggtttatgccggtgaacat 395
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>ref|NM_179633.2| Arabidopsis thaliana auxin:hydrogen symporter AT2G17500 transcript
           variant AT2G17500.2 mRNA, complete cds
          Length = 1667

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 384 tcatctcctggtggttcatgccggtgaacat 414
           ||||||| |||||||| ||||||||||||||
Sbjct: 437 tcatctcatggtggtttatgccggtgaacat 467
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>ref|NM_127304.2| Arabidopsis thaliana auxin:hydrogen symporter AT2G17500 transcript
           variant AT2G17500.1 mRNA, complete cds
          Length = 1650

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 384 tcatctcctggtggttcatgccggtgaacat 414
           ||||||| |||||||| ||||||||||||||
Sbjct: 420 tcatctcatggtggtttatgccggtgaacat 450
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>emb|BX819980.1|CNS0AA6Y Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS56ZC09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1563

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 384 tcatctcctggtggttcatgccggtgaacat 414
           ||||||| |||||||| ||||||||||||||
Sbjct: 365 tcatctcatggtggtttatgccggtgaacat 395
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>emb|BX820250.1|CNS0A8MZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH12ZF03 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1544

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 384 tcatctcctggtggttcatgccggtgaacat 414
           ||||||| |||||||| ||||||||||||||
Sbjct: 342 tcatctcatggtggtttatgccggtgaacat 372
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>emb|BX820270.1|CNS0A7WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH16ZA09 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1519

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 384 tcatctcctggtggttcatgccggtgaacat 414
           ||||||| |||||||| ||||||||||||||
Sbjct: 326 tcatctcatggtggtttatgccggtgaacat 356
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>gb|AY084347.1| Arabidopsis thaliana clone 105072 mRNA, complete sequence
          Length = 1620

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 384 tcatctcctggtggttcatgccggtgaacat 414
           ||||||| |||||||| ||||||||||||||
Sbjct: 420 tcatctcatggtggtttatgccggtgaacat 450
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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 525     tcggcaacctgctgctgatcgtcgtc 550
               |||||||||||| |||||||||||||
Sbjct: 1273961 tcggcaacctgccgctgatcgtcgtc 1273936
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>gb|AC074257.5| Homo sapiens BAC clone RP11-796I2 from 7, complete sequence
          Length = 186047

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 21    cctccatcctccttgctcctctgccc 46
             |||||||||||| |||||||||||||
Sbjct: 83572 cctccatcctccctgctcctctgccc 83597
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>gb|AC093583.3| Homo sapiens BAC clone RP13-452N2 from 7, complete sequence
          Length = 178471

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 21     cctccatcctccttgctcctctgccc 46
              |||||||||||| |||||||||||||
Sbjct: 129733 cctccatcctccctgctcctctgccc 129758
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>gb|AY530950.1| Zea mays putative zinc finger protein (Z438D03.1), unknown (Z438D03.5),
              epsilon-COP (Z438D03.6), putative kinase (Z438D03.7),
              unknown (Z438D03.25), and C1-B73 (Z438D03.27) genes,
              complete cds
          Length = 185988

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 241    cgtcatcggagccttcctcgcc 262
              ||||||||||||||||||||||
Sbjct: 109298 cgtcatcggagccttcctcgcc 109277
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>gb|AY389779.1| Hyacinthus orientalis unknown mRNA
          Length = 869

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                    
Query: 387 tctcctggtggttcatgccggtgaacatagcaatcacattc 427
           |||| |||||||||||||| || ||||| || |||||||||
Sbjct: 128 tctcttggtggttcatgcccgtaaacatcgccatcacattc 168
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>gb|AY336593.1| Eurylaimus ochromalus glyceraldehyde-3-phosphate dehydrogenase
           (NAPDH) gene, intron 11
          Length = 330

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 23  tccatcctccttgctcctctgcccc 47
           ||||| |||||||||||||||||||
Sbjct: 279 tccattctccttgctcctctgcccc 255
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 529     caacctgctgctgatcgtcg 548
               ||||||||||||||||||||
Sbjct: 2938606 caacctgctgctgatcgtcg 2938625
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      ctcctctgccccgccgcgca 55
               ||||||||||||||||||||
Sbjct: 1910275 ctcctctgccccgccgcgca 1910294
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>gb|AC160469.5| Mus musculus chromosome 5, clone RP23-318I19, complete sequence
          Length = 221860

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    gtcgctgctcgtggtggcat 209
              ||||||||||||||||||||
Sbjct: 156957 gtcgctgctcgtggtggcat 156938
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>gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome 18, complete sequence
          Length = 165504

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 20     acctccatcctccttgctcctctg 43
              ||||||||||||||||||| ||||
Sbjct: 135668 acctccatcctccttgctcatctg 135691
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>ref|XM_814779.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053507711.260) partial mRNA
          Length = 1569

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 193 gctgctcgtggtggcatcca 212
           ||||||||||||||||||||
Sbjct: 784 gctgctcgtggtggcatcca 765
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>emb|CR732553.1|CNS0GS6M Tetraodon nigroviridis full-length cDNA
          Length = 1352

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 848 ccatcgctcatcttcgccaa 829
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>emb|CR732456.1|CNS0GS3X Tetraodon nigroviridis full-length cDNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 862 ccatcgctcatcttcgccaa 843
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>emb|CR730144.2|CNS0GQBQ Tetraodon nigroviridis full-length cDNA
          Length = 1387

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 871 ccatcgctcatcttcgccaa 852
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>emb|CR728105.2|CNS0GOR3 Tetraodon nigroviridis full-length cDNA
          Length = 1387

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 871 ccatcgctcatcttcgccaa 852
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>emb|CR727382.2|CNS0GO70 Tetraodon nigroviridis full-length cDNA
          Length = 1369

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 856 ccatcgctcatcttcgccaa 837
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>emb|CR726999.2|CNS0GNWD Tetraodon nigroviridis full-length cDNA
          Length = 1371

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 887 ccatcgctcatcttcgccaa 868
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>emb|CR723826.2|CNS0GLG8 Tetraodon nigroviridis full-length cDNA
          Length = 1376

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 885 ccatcgctcatcttcgccaa 866
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>emb|CR682093.2|CNS0FP95 Tetraodon nigroviridis full-length cDNA
          Length = 1370

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 866 ccatcgctcatcttcgccaa 847
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>emb|CR681026.2|CNS0FOFI Tetraodon nigroviridis full-length cDNA
          Length = 1331

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 856 ccatcgctcatcttcgccaa 837
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>emb|CR655571.2|CNS0F4T5 Tetraodon nigroviridis full-length cDNA
          Length = 1377

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 873 ccatcgctcatcttcgccaa 854
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>emb|CR654706.2|CNS0F454 Tetraodon nigroviridis full-length cDNA
          Length = 1358

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 874 ccatcgctcatcttcgccaa 855
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>emb|CR653898.2|CNS0F3IO Tetraodon nigroviridis full-length cDNA
          Length = 1358

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 854 ccatcgctcatcttcgccaa 835
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>emb|CR651694.2|CNS0F1TG Tetraodon nigroviridis full-length cDNA
          Length = 1330

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 848 ccatcgctcatcttcgccaa 829
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>emb|CR649728.2|CNS0F0AU Tetraodon nigroviridis full-length cDNA
          Length = 1361

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 335 ccatcgctcatcttcgccaa 354
           ||||||||||||||||||||
Sbjct: 861 ccatcgctcatcttcgccaa 842
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>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 529     caacctgctgctgatcgtcg 548
               ||||||||||||||||||||
Sbjct: 3964681 caacctgctgctgatcgtcg 3964700
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>emb|CR555308.1| Azoarcus sp. EbN1 plasmid 2
          Length = 223670

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 287    gccagcgcccgcagggacat 306
              ||||||||||||||||||||
Sbjct: 190641 gccagcgcccgcagggacat 190660
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>emb|AL645606.22| Mouse DNA sequence from clone RP23-374K2 on chromosome 1, complete
              sequence
          Length = 193458

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 315    ttgtttttacagtcttcacc 334
              ||||||||||||||||||||
Sbjct: 172456 ttgtttttacagtcttcacc 172437
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>ref|NM_137750.1| Drosophila melanogaster CG10321-RA (CG10321), mRNA
          Length = 3335

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  cctgctgctgatcgtcgtcc 551
            ||||||||||||||||||||
Sbjct: 1454 cctgctgctgatcgtcgtcc 1435
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>gb|AC009459.6| Drosophila melanogaster, chromosome 2R, region 57E-57F, BAC clone
             BACR34C17, complete sequence
          Length = 167447

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   cctgctgctgatcgtcgtcc 551
             ||||||||||||||||||||
Sbjct: 92650 cctgctgctgatcgtcgtcc 92631
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>gb|AC009912.5|AC009912 Drosophila melanogaster, chromosome 2R, region 57F-58A, BAC clone
             BACR46G10, complete sequence
          Length = 165158

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   cctgctgctgatcgtcgtcc 551
             ||||||||||||||||||||
Sbjct: 54079 cctgctgctgatcgtcgtcc 54060
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>emb|BX255948.4| Zebrafish DNA sequence from clone CH211-250J1, complete sequence
          Length = 194257

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    tgaaaaccatcattgacatc 108
             ||||||||||||||||||||
Sbjct: 71694 tgaaaaccatcattgacatc 71713
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>emb|BX248087.9| Zebrafish DNA sequence from clone CH211-191J22, complete sequence
          Length = 150181

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    tgaaaaccatcattgacatc 108
             ||||||||||||||||||||
Sbjct: 31473 tgaaaaccatcattgacatc 31492
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>gb|BT003241.1| Drosophila melanogaster LD45439 full insert cDNA
          Length = 3355

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  cctgctgctgatcgtcgtcc 551
            ||||||||||||||||||||
Sbjct: 1454 cctgctgctgatcgtcgtcc 1435
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>emb|AL390801.4|CNS06C7S Human chromosome 14 DNA sequence BAC R-728G21 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 166847

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 415    agcaatcacattcctggttg 434
              ||||||||||||||||||||
Sbjct: 123731 agcaatcacattcctggttg 123750
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>gb|AC005871.3|AC005871 citb_109_p_11, complete sequence
          Length = 186418

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   gctgctcgtggtggcatcca 212
             ||||||||||||||||||||
Sbjct: 53275 gctgctcgtggtggcatcca 53294
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>gb|AE003454.3| Drosophila melanogaster chromosome 2R, section 62 of 73 of the complete
              sequence
          Length = 313634

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 532    cctgctgctgatcgtcgtcc 551
              ||||||||||||||||||||
Sbjct: 243186 cctgctgctgatcgtcgtcc 243167
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>gb|AC108848.12| Mus musculus chromosome 5, clone RP23-300K5, complete sequence
          Length = 231380

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    gtcgctgctcgtggtggcat 209
              ||||||||||||||||||||
Sbjct: 157125 gtcgctgctcgtggtggcat 157144
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>gb|AE001826.1| Deinococcus radiodurans R1 plasmid MP1, complete sequence
          Length = 177466

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 282    tcaccgccagcgcccgcagg 301
              ||||||||||||||||||||
Sbjct: 110958 tcaccgccagcgcccgcagg 110977
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>gb|DQ138790.1| Drosophila simulans strain Ky-b CG10321 gene, partial cds
          Length = 2463

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  cctgctgctgatcgtcgtcc 551
            ||||||||||||||||||||
Sbjct: 1093 cctgctgctgatcgtcgtcc 1074
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>gb|DQ138789.1| Drosophila simulans strain Ky-a CG10321 gene, partial cds
          Length = 2463

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  cctgctgctgatcgtcgtcc 551
            ||||||||||||||||||||
Sbjct: 1093 cctgctgctgatcgtcgtcc 1074
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>gb|DQ138788.1| Drosophila melanogaster strain Ral1 CG10321 gene, partial cds
          Length = 2466

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 532  cctgctgctgatcgtcgtcc 551
            ||||||||||||||||||||
Sbjct: 1096 cctgctgctgatcgtcgtcc 1077


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,270,974
Number of Sequences: 3902068
Number of extensions: 4270974
Number of successful extensions: 93161
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92756
Number of HSP's gapped (non-prelim): 404
length of query: 613
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 590
effective length of database: 17,143,297,704
effective search space: 10114545645360
effective search space used: 10114545645360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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