Clone Information

BLAST Search Result

Clone Name	baal7k06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ATG9A_PONPY (Q5RCS0) Autophagy-related protein 9A (APG9-like 1)	35	0.043
2	ATG9A_HUMAN (Q7Z3C6) Autophagy-related protein 9A (APG9-like 1)	35	0.043
3	ATG9A_RAT (Q5FWU3) Autophagy-related protein 9A (APG9-like 1)	33	0.16
4	ATG9A_BOVIN (Q3T904) Autophagy-related protein 9A (APG9-like 1) ...	33	0.16
5	PACC_FUSOX (Q870A3) pH-response transcription factor pacC/RIM101	33	0.21
6	PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101	32	0.28
7	PACC_GIBMO (Q873X0) pH-response transcription factor pacC/RIM101	32	0.28
8	HGS_MOUSE (Q99LI8) Hepatocyte growth factor-regulated tyrosine k...	32	0.37
9	HGS_HUMAN (O14964) Hepatocyte growth factor-regulated tyrosine k...	32	0.37
10	TOP6B_PYRAE (Q8ZVM0) Type II DNA topoisomerase VI subunit B (EC ...	32	0.37
11	HGS_RAT (Q9JJ50) Hepatocyte growth factor-regulated tyrosine kin...	32	0.48
12	UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoske...	32	0.48
13	K1HB_HUMAN (Q14525) Keratin, type I cuticular Ha3-II (Hair kerat...	30	1.1
14	ZBT34_HUMAN (Q8NCN2) Zinc finger and BTB domain-containing prote...	30	1.4
15	JIP3_HUMAN (Q9UPT6) C-jun-amino-terminal kinase-interacting prot...	30	1.4
16	Y3980_PSEAE (Q51470) Hypothetical UPF0004 protein PA3980	29	2.4
17	CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic lin...	29	2.4
18	FA13C_MOUSE (Q9DBR2) Protein FAM13C1	29	3.1
19	POLS2_HUMAN (Q5K4E3) Polyserase-2 precursor (EC 3.4.21.-) (Polys...	29	3.1
20	SPN90_MOUSE (Q9ESJ4) SH3 adapter protein SPIN90 (NCK-interacting...	29	3.1
21	NKX28_HUMAN (O15522) Homeobox protein Nkx-2.8 (Homeobox protein ...	28	4.0
22	PMD1_YEAST (P32634) Negative regulator of sporulation PMD1	28	4.0
23	LYTM_STAAR (Q6GK35) Glycyl-glycine endopeptidase lytM precursor ...	28	4.0
24	RX_HUMAN (Q9Y2V3) Retinal homeobox protein Rx (Retina and anteri...	28	4.0
25	K1H3_MOUSE (Q61897) Keratin, type I cuticular Ha3 (Hair keratin,...	28	4.0
26	FA13C_HUMAN (Q8NE31) Protein FAM13C1	28	4.0
27	PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20	28	4.0
28	DYH5_HUMAN (Q8TE73) Ciliary dynein heavy chain 5 (Axonemal beta ...	28	5.3
29	CF103_HUMAN (Q8N7X0) Protein C6orf103	28	5.3
30	TRPA_DESVH (Q72EU7) Tryptophan synthase alpha chain (EC 4.2.1.20)	28	5.3
31	LYTM_STAAU (O33599) Glycyl-glycine endopeptidase lytM precursor ...	28	5.3
32	LYTM_STAAN (Q7A7T0) Glycyl-glycine endopeptidase lytM precursor ...	28	5.3
33	LYTM_STAAM (Q99WV0) Glycyl-glycine endopeptidase lytM precursor ...	28	5.3
34	LYTM_STAAC (Q5HJ99) Glycyl-glycine endopeptidase lytM precursor ...	28	5.3
35	LACY_LACHE (Q7WTB2) Lactose permease (Lactose-proton symporter) ...	28	5.3
36	PACC_EMENI (Q00202) pH-response transcription factor pacC/RIM101	28	5.3
37	PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9	28	6.9
38	VE2_HPV1A (P03118) Regulatory protein E2	28	6.9
39	LYTM_STAAW (Q8NYG1) Glycyl-glycine endopeptidase lytM precursor ...	28	6.9
40	LYTM_STAAS (Q6GCJ6) Glycyl-glycine endopeptidase lytM precursor ...	28	6.9
41	CATA_ARCFU (O28050) Peroxidase/catalase (EC 1.11.1.6) (Catalase-...	28	6.9
42	CAND_DROME (P27398) Calpain D (EC 3.4.22.-) (Calcium-activated n...	28	6.9
43	YN91_SCHPO (Q9Y808) Hypothetical protein C146.01 in chromosome II	28	6.9
44	CTND1_HUMAN (O60716) Catenin delta-1 (p120 catenin) (p120(ctn)) ...	28	6.9
45	MK15_HUMAN (Q8TD08) Mitogen-activated protein kinase 15 (EC 2.7....	27	9.0
46	LARP_DROME (Q9VAW5) La-related protein (dlarp)	27	9.0
47	BEM3_YEAST (P32873) GTPase-activating protein BEM3 (Bud emergenc...	27	9.0
48	UBQL1_MOUSE (Q8R317) Ubiquilin-1 (Protein linking IAP with cytos...	27	9.0
49	NCOA3_XENLA (O57539) Nuclear receptor coactivator 3 (EC 2.3.1.48...	27	9.0
50	DHE1_ARATH (Q43314) Glutamate dehydrogenase 1 (EC 1.4.1.3) (GDH 1)	27	9.0
51	5HT6R_MOUSE (Q9R1C8) 5-hydroxytryptamine 6 receptor (5-HT-6) (Se...	27	9.0
52	GRI22_VITVI (Q9M4H4) Ripening-related protein grip22 precursor	27	9.0
53	AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clath...	27	9.0
54	SYI_PROMM (Q7TUN3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isole...	27	9.0
55	LPSE_RHIME (Q9R9N1) Lipopolysaccharide core biosynthesis glycosy...	27	9.0
56	KGP24_DROME (Q03043) cGMP-dependent protein kinase, isozyme 2 fo...	27	9.0
57	APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)	27	9.0
58	CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor...	27	9.0
59	5HT6R_RAT (P31388) 5-hydroxytryptamine 6 receptor (5-HT-6) (Sero...	27	9.0

>ATG9A_PONPY (Q5RCS0) Autophagy-related protein 9A (APG9-like 1)|
          Length = 839

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 25/88 (28%), Positives = 35/88 (39%)
 Frame = +2

Query: 50  VGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQ 229
           VGD  S  Q +++  G      P+   A Q+  +          + S   FA+ NPG   
Sbjct: 515 VGDTCSFAQMDVRQHGH-----PQWLSAGQTEASVYQQAEDGKTELSLMHFAITNPGWQP 569

Query: 230 PKNSAVFSNALSSPVRRGLQPYHLDQGG 313
           P+ S  F   L   V+R      L QGG
Sbjct: 570 PRESTAFLGFLKEQVQRDGAAASLAQGG 597

to top

>ATG9A_HUMAN (Q7Z3C6) Autophagy-related protein 9A (APG9-like 1)|
          Length = 839

 Score = 35.0 bits (79), Expect = 0.043
 Identities = 25/88 (28%), Positives = 35/88 (39%)
 Frame = +2

Query: 50  VGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQ 229
           VGD  S  Q +++  G      P+   A Q+  +          + S   FA+ NPG   
Sbjct: 515 VGDTCSFAQMDVRQHGH-----PQWLSAGQTEASVYQQAEDGKTELSLMHFAITNPGWQP 569

Query: 230 PKNSAVFSNALSSPVRRGLQPYHLDQGG 313
           P+ S  F   L   V+R      L QGG
Sbjct: 570 PRESTAFLGFLKEQVQRDGAAASLAQGG 597

to top

>ATG9A_RAT (Q5FWU3) Autophagy-related protein 9A (APG9-like 1)|
          Length = 839

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 24/88 (27%), Positives = 34/88 (38%)
 Frame = +2

Query: 50  VGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQ 229
           VGD  S  Q +++  G      P+     Q+  +          + S   FA+ NPG   
Sbjct: 515 VGDTCSFAQMDVRQHGH-----PQWLSGGQTEASVYQQAEDGKTELSLMHFAITNPGWQP 569

Query: 230 PKNSAVFSNALSSPVRRGLQPYHLDQGG 313
           P+ S  F   L   V+R      L QGG
Sbjct: 570 PRESTAFLGFLKEQVQRDGAAAGLAQGG 597

to top

>ATG9A_BOVIN (Q3T904) Autophagy-related protein 9A (APG9-like 1) (Autophagy|
           protein 9)
          Length = 839

 Score = 33.1 bits (74), Expect = 0.16
 Identities = 24/88 (27%), Positives = 34/88 (38%)
 Frame = +2

Query: 50  VGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQ 229
           VGD  S  Q +++  G      P+     Q+  +          + S   FA+ NPG   
Sbjct: 515 VGDTCSFAQMDVRQHGH-----PQWLSGGQTEASVYQQAEDGKTELSLMHFAITNPGWQP 569

Query: 230 PKNSAVFSNALSSPVRRGLQPYHLDQGG 313
           P+ S  F   L   V+R      L QGG
Sbjct: 570 PRESTAFLGFLKEQVQRDGAAAGLAQGG 597

to top

>PACC_FUSOX (Q870A3) pH-response transcription factor pacC/RIM101|
          Length = 609

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 12/101 (11%)
 Frame = +2

Query: 125 QYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQPKN------------SAVFSNALSS 268
           QY  Q   A VH   T S+ PSA  + L  P     K+              ++ NA  +
Sbjct: 291 QYMPQPAPAPVHAGPTPSKTPSAQQYYLPMPSARTQKDLIHIDTILGQMQDTIYENA--N 348

Query: 269 PVRRGLQPYHLDQGGDAGYFANGLAREPNPTASNDSSMDMH 391
               G+  +H + G       NG    P+P  S+ S   MH
Sbjct: 349 HATAGVHIHHAENG------FNGYRNTPSPPTSHRSPTGMH 383

to top

>PACC_GIBFU (Q8J1U9) pH-response transcription factor pacC/RIM101|
          Length = 618

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 12/101 (11%)
 Frame = +2

Query: 125 QYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQPKN------------SAVFSNALSS 268
           QY  Q   A VH   T SQ P A  + L  P     K+              ++ NA  +
Sbjct: 299 QYMPQPAPAPVHAGPTPSQNPLAQQYYLPMPSARTQKDLIHIDTILGQMQDTIYENA--N 356

Query: 269 PVRRGLQPYHLDQGGDAGYFANGLAREPNPTASNDSSMDMH 391
               G+  +H + G       NG    P+P  S+ S   MH
Sbjct: 357 HATAGVHIHHAENG------FNGYRNTPSPPTSHRSPTGMH 391

to top

>PACC_GIBMO (Q873X0) pH-response transcription factor pacC/RIM101|
          Length = 613

 Score = 32.3 bits (72), Expect = 0.28
 Identities = 27/101 (26%), Positives = 37/101 (36%), Gaps = 12/101 (11%)
 Frame = +2

Query: 125 QYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQPKN------------SAVFSNALSS 268
           QY  Q   A VH   T SQ P A  + L  P     K+              ++ NA  +
Sbjct: 294 QYMPQPAPAPVHAGPTPSQNPLAQQYYLPMPSARTQKDLIHIDTILGQMQDTIYENA--N 351

Query: 269 PVRRGLQPYHLDQGGDAGYFANGLAREPNPTASNDSSMDMH 391
               G+  +H + G       NG    P+P  S+ S   MH
Sbjct: 352 HATAGVHIHHAENG------FNGYRNTPSPPTSHRSPTGMH 386

to top

>HGS_MOUSE (Q99LI8) Hepatocyte growth factor-regulated tyrosine kinase|
           substrate
          Length = 775

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
 Frame = +2

Query: 104 PLASPRSQYASQSTQATVHMPNTSSQQPS--------ASLFALGNPGLTQPKNSAVFSNA 259
           P  +P +Q A Q+       P  SS QP+        AS      P ++QP  ++     
Sbjct: 636 PTGAPGAQAAPQAQAGPTTSPAYSSYQPTPTPGYQSVASQAPQSLPAISQPPQTSNIGYM 695

Query: 260 LSSPVRRGLQPYHL 301
            S P+  G QPY++
Sbjct: 696 GSQPMSMGYQPYNM 709

to top

>HGS_HUMAN (O14964) Hepatocyte growth factor-regulated tyrosine kinase|
           substrate (Protein pp110) (Hrs)
          Length = 777

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 21/66 (31%), Positives = 29/66 (43%)
 Frame = +2

Query: 104 PLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQPKNSAVFSNALSSPVRRG 283
           P ASP   Y+S     T    N +SQ P +       P ++QP  S+      S  V  G
Sbjct: 654 PTASPA--YSSYQPTPTAGYQNVASQAPQSL------PAISQPPQSSTMGYMGSQSVSMG 705

Query: 284 LQPYHL 301
            QPY++
Sbjct: 706 YQPYNM 711

to top

>TOP6B_PYRAE (Q8ZVM0) Type II DNA topoisomerase VI subunit B (EC 5.99.1.3)|
           (TopoVI-B)
          Length = 527

 Score = 32.0 bits (71), Expect = 0.37
 Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
 Frame = -3

Query: 254 WKRPPSSWAASTLGFLVQISSQMVAGC-LCWAYAR*PECFGLHIVILE 114
           W+RP S W +     L++I ++ + G    +A  R PE +G H  I+E
Sbjct: 301 WRRPRSDWLSPAGAELLEIGAKAILGAEAVFAITRKPESYGGHPFIVE 348

to top

>HGS_RAT (Q9JJ50) Hepatocyte growth factor-regulated tyrosine kinase|
           substrate (SNAP-25-interacting protein Hrs-2)
          Length = 776

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 8/74 (10%)
 Frame = +2

Query: 104 PLASPRSQYASQSTQATVHMPNTSSQQPS--------ASLFALGNPGLTQPKNSAVFSNA 259
           P  +P +Q A Q+       P  SS QP+        AS      P ++QP  ++     
Sbjct: 637 PAGAPGAQAAPQAQAGPTTNPAYSSYQPTPTPGYQNVASQAPQSLPAISQPPQTSNIGYM 696

Query: 260 LSSPVRRGLQPYHL 301
            S P+  G QPY++
Sbjct: 697 GSQPMSMGYQPYNM 710

to top

>UBQL1_RAT (Q9JJP9) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)|
           (PLIC-1)
          Length = 582

 Score = 31.6 bits (70), Expect = 0.48
 Identities = 34/107 (31%), Positives = 46/107 (42%), Gaps = 8/107 (7%)
 Frame = +2

Query: 32  NGLRLTVGDIASHVQH--EIQYGGDNPLAS----PRSQYASQS--TQATVHMPNTSSQQP 187
           N LR    DI   + +  + Q+GG NP AS    P S   +Q   T+    +PN  + Q 
Sbjct: 261 NALRRMYTDIQEPMLNAAQEQFGG-NPFASLVSSPSSAEGTQPSRTENRDPLPNPWAPQT 319

Query: 188 SASLFALGNPGLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYF 328
             S  A G+ G T    S    NA S+P  +G    +L  G  A  F
Sbjct: 320 PQSSPASGSTGSTTNTVSTSAGNATSTPAGQGTSGPNLVPGAGASMF 366

to top

>K1HB_HUMAN (Q14525) Keratin, type I cuticular Ha3-II (Hair keratin, type I|
           Ha3-II)
          Length = 404

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +2

Query: 38  LRLTVG--DIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQ 181
           LR TV   +I    QH ++Y  +N L    ++Y+SQ +Q    + N  SQ
Sbjct: 275 LRRTVNALEIELQAQHNLRYSLENTLTESEARYSSQLSQVQSLITNVESQ 324

to top

>ZBT34_HUMAN (Q8NCN2) Zinc finger and BTB domain-containing protein 34|
          Length = 500

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 31/110 (28%), Positives = 43/110 (39%)
 Frame = +2

Query: 29  ENGLRLTVGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFAL 208
           E  + + VG   S +QH   Y          SQ ASQ T  +    + S+  PS S+ + 
Sbjct: 265 EQVVAVNVGSYGSVLQHAYSY----------SQAASQPTNVSEAFGSLSNSSPSRSMLSC 314

Query: 209 GNPGLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYFANGLAREPNP 358
              G  + K       ALS  +   LQ   L QG D+    N    E +P
Sbjct: 315 FRGGRARQK------RALSVHLHSDLQ--GLVQGSDSEAMMNNPGYESSP 356

to top

>JIP3_HUMAN (Q9UPT6) C-jun-amino-terminal kinase-interacting protein 3|
            (JNK-interacting protein 3) (JIP-3) (JNK MAP kinase
            scaffold protein 3) (Mitogen-activated protein kinase
            8-interacting protein 3)
          Length = 1334

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/41 (31%), Positives = 16/41 (39%)
 Frame = -3

Query: 353  SARGPSRSQSSLHPHPDPDGMVAGPGARGWIVRWKRPPSSW 231
            S  GP    SS  P P+P G   G G+      W    + W
Sbjct: 937  SENGPEPDSSSTRPEPEPSGDPTGAGSSAAPTMWLGAQNGW 977

to top

>Y3980_PSEAE (Q51470) Hypothetical UPF0004 protein PA3980|
          Length = 446

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 19/54 (35%), Positives = 23/54 (42%)
 Frame = +1

Query: 169 HKQPATICELICTRKPRVDAAQELGGLFQRTIQPRAPGPATIPSGSGWGCRLLC 330
           H+ P  I     TRKP+VD +      F R  +PR  GP    S    GC   C
Sbjct: 109 HRLPEMIDAARSTRKPQVDVSFPEIEKFDRLPEPRVDGPTAFVSVME-GCSKYC 161

to top

>CLAP1_HUMAN (Q7Z460) CLIP-associating protein 1 (Cytoplasmic linker-associated|
           protein 1) (Multiple asters homolog 1)
          Length = 1538

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 12/67 (17%)
 Frame = +2

Query: 185 PSASLFALGNPGL------------TQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYF 328
           P    F LG PG             T     A  ++AL  PVRR  +PY +    DA   
Sbjct: 771 PPLDRFGLGQPGRIPGSVNAMRVLSTSTDLEAAVADALKKPVRRRYEPYGMYSDDDANSD 830

Query: 329 ANGLARE 349
           A+ +  E
Sbjct: 831 ASSVCSE 837

to top

>FA13C_MOUSE (Q9DBR2) Protein FAM13C1|
          Length = 601

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +2

Query: 95  GDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFAL 208
           GDNPL SPR    SQS +  +  P ++   PS+  F +
Sbjct: 252 GDNPLLSPRCSIFSQSQRFNLD-PESAPSPPSSQQFMM 288

to top

>POLS2_HUMAN (Q5K4E3) Polyserase-2 precursor (EC 3.4.21.-) (Polyserine protease|
           2) (Protease serine 36)
          Length = 855

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 21/68 (30%), Positives = 28/68 (41%)
 Frame = -3

Query: 374 SRLKPWDSARGPSRSQSSLHPHPDPDGMVAGPGARGWIVRWKRPPSSWAASTLGFLVQIS 195
           SR++P      PS     LHP   P      PGA  W++ WK P      +     V I 
Sbjct: 687 SRVEP-----SPSALPICLHPAGIP------PGASCWVLGWKEPQDRVPVAA---AVSIL 732

Query: 194 SQMVAGCL 171
           +Q +  CL
Sbjct: 733 TQRICDCL 740

to top

>SPN90_MOUSE (Q9ESJ4) SH3 adapter protein SPIN90 (NCK-interacting protein with|
           SH3 domain) (SH3 protein interacting with Nck, 90 kDa)
           (VacA-interacting protein, 54 kDa) (VIP54)
           (N-WASP-interacting protein, 90kDa) (Wiskott-Aldrich
           syndrome protein-binding
          Length = 714

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
 Frame = +1

Query: 97  RQSVGLSKITICKPKHSGYRAYAQ-HKQPATICELICTRKPRVDAAQELG---GLFQRTI 264
           R+    S  T+  P  S +   A   +QP  +C     R+  + +++ LG    L+Q   
Sbjct: 106 RRGTSASSATVMTPSTSDHHLDAAVSRQPNGVCRTGFERQHSLPSSEHLGTDGALYQVPP 165

Query: 265 QPRAPGPATIP 297
           QPR   P T P
Sbjct: 166 QPRRAAPTTPP 176

to top

>NKX28_HUMAN (O15522) Homeobox protein Nkx-2.8 (Homeobox protein NK-2 homolog H)|
          Length = 239

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 18/58 (31%), Positives = 26/58 (44%)
 Frame = +2

Query: 107 LASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQPKNSAVFSNALSSPVRR 280
           L S R  Y S    +    P  SSQ+PSA   + G+    + K   +FS A +  + R
Sbjct: 44  LDSERGHYPSSDESSLETSPPDSSQRPSARPASPGSDAEKRKKRRVLFSKAQTLELER 101

to top

>PMD1_YEAST (P32634) Negative regulator of sporulation PMD1|
          Length = 1753

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 21/87 (24%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
 Frame = +2

Query: 62   ASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQPKNS 241
            +S +   +Q+G D+P+AS RS ++++ + +     + + +  ++SL       L    +S
Sbjct: 953  SSSLAEYVQFGRDSPVASRRSSHSTRKSSS-----SDARRISNSSL-------LRNTLDS 1000

Query: 242  AVFSNALSS--PVRRGLQPYHLDQGGD 316
             + SN+  S  P    +Q Y ++ G D
Sbjct: 1001 QLLSNSYGSDIPYEASIQEYGMNNGRD 1027

to top

>LYTM_STAAR (Q6GK35) Glycyl-glycine endopeptidase lytM precursor (EC 3.4.24.75)|
           (Autolysin lytM)
          Length = 316

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
 Frame = +2

Query: 20  RQHEN--GLRLTVGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSA 193
           +QH N  G +  VG  AS+  H          ++    Y S +    V+ PN +S Q   
Sbjct: 126 QQHINQYGYQSNVGPDASYYSH----------SNNNQAYNSHNGNGKVNYPNGTSNQNG- 174

Query: 194 SLFALGNPGLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYFANGLAREPNPTAS 367
                G+         A  ++ L+S  R+ LQPY    GG A Y  +    E +P  S
Sbjct: 175 -----GSASKATASGHAKDASWLTS--RKQLQPYGQYHGGGAHYGVDYAMPENSPVYS 225

to top

>RX_HUMAN (Q9Y2V3) Retinal homeobox protein Rx (Retina and anterior neural|
           fold homeobox protein)
          Length = 346

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = +1

Query: 262 IQPRAPGPATIPSGSGWGCRLLCERLGPRAESHGFKRL 375
           +QP AP P + P G G+G +   +   PR  S    RL
Sbjct: 293 LQPLAPPPPSYPCGPGFGDKFPLDEADPRNSSIAALRL 330

to top

>K1H3_MOUSE (Q61897) Keratin, type I cuticular Ha3 (Hair keratin, type I Ha3)|
           (Fragment)
          Length = 323

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +2

Query: 38  LRLTVG--DIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQ 181
           LR TV   +I    QH ++   +N LA   ++Y+SQ +Q    + N  SQ
Sbjct: 194 LRRTVNALEIELQAQHSMRNSLENTLAESEARYSSQLSQVQCLITNVESQ 243

to top

>FA13C_HUMAN (Q8NE31) Protein FAM13C1|
          Length = 585

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +2

Query: 95  GDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFAL 208
           GDNPL SPR    SQS +  +  P ++   PS   F +
Sbjct: 232 GDNPLLSPRCSIFSQSQRFNLD-PESAPSPPSTQQFMM 268

to top

>PALA_CRYNE (Q5KEK0) pH-response regulator protein palA/RIM20|
          Length = 902

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 25/90 (27%), Positives = 35/90 (38%)
 Frame = +2

Query: 23  QHENGLRLTVGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLF 202
           Q  N  R+ VG + +  Q ++          PR Q  S  +      P+ S  QPSA   
Sbjct: 726 QFLNTRRIDVGQMTTQFQQQMNVSEPQQQPEPRYQSPSPQSFQPSFSPSPSHFQPSAP-- 783

Query: 203 ALGNPGLTQPKNSAVFSNALSSPVRRGLQP 292
                  +   +S V S A S+P RR   P
Sbjct: 784 -------SSFSSSPVRSPAPSAPARRESPP 806

to top

>DYH5_HUMAN (Q8TE73) Ciliary dynein heavy chain 5 (Axonemal beta dynein heavy|
            chain 5) (HL1)
          Length = 4624

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = -3

Query: 254  WKRPPSSWAASTLGF----LVQISSQMVAGCLCWAYAR*PECF 138
            WK+  +SW +STLGF    L++ +SQ  +    W +   P CF
Sbjct: 4444 WKK--ASWISSTLGFWFTELIERNSQFTS----WVFNGRPHCF 4480

to top

>CF103_HUMAN (Q8N7X0) Protein C6orf103|
          Length = 754

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 22/54 (40%), Positives = 25/54 (46%)
 Frame = -2

Query: 162 ICTVA*VLWLAYCDLGEANGLSPPY*ISCWTCEAISPTVSLKPFSCCLKIHSYS 1
           +C  A V W  Y   G     SPP      T E  S   SLKP S  LKIH+Y+
Sbjct: 686 VCFSALVRWGEY---GALTKDSPPIEPGLLTAETFS-WKSLKPGSLVLKIHTYA 735

to top

>TRPA_DESVH (Q72EU7) Tryptophan synthase alpha chain (EC 4.2.1.20)|
          Length = 257

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 4/57 (7%)
 Frame = +2

Query: 185 PSASLFALGNP----GLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYFANGLA 343
           P A  F +  P    GL+ P ++ +F +AL           HLD GGDA  F    A
Sbjct: 208 PVALGFGISRPAQLEGLSHPPDAVIFGSALLR---------HLDAGGDAASFMKAWA 255

to top

>LYTM_STAAU (O33599) Glycyl-glycine endopeptidase lytM precursor (EC 3.4.24.75)|
           (Autolysin lytM)
          Length = 316

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 33/118 (27%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
 Frame = +2

Query: 20  RQHEN--GLRLTVGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSA 193
           +QH N  G +  VG  AS+  H          ++    Y S      V+ PN +S Q   
Sbjct: 126 QQHINQYGYQSNVGPDASYYSH----------SNNNQAYNSHDGNGKVNYPNGTSNQNGG 175

Query: 194 SLFALGNPGLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYFANGLAREPNPTAS 367
           S       G       A  ++ L+S  R+ LQPY    GG A Y  +    E +P  S
Sbjct: 176 SASKATRSG------HAKDASWLTS--RKQLQPYGQYHGGGAHYGVDYAMPENSPVYS 225

to top

>LYTM_STAAN (Q7A7T0) Glycyl-glycine endopeptidase lytM precursor (EC 3.4.24.75)|
           (Autolysin lytM)
          Length = 316

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
 Frame = +2

Query: 20  RQHEN--GLRLTVGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSA 193
           +QH N  G +  VG  AS+  H          ++    Y S      V+ PN +S Q   
Sbjct: 126 QQHINQYGYQSNVGPDASYYSH----------SNNNQAYNSHDGNGKVNYPNGTSNQNG- 174

Query: 194 SLFALGNPGLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYFANGLAREPNPTAS 367
                G+         A  ++ L+S  R+ LQPY    GG A Y  +    E +P  S
Sbjct: 175 -----GSASKATASGHAKDASWLTS--RKQLQPYGQYHGGGAHYGVDYAMPENSPVYS 225

to top

>LYTM_STAAM (Q99WV0) Glycyl-glycine endopeptidase lytM precursor (EC 3.4.24.75)|
           (Autolysin lytM)
          Length = 316

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
 Frame = +2

Query: 20  RQHEN--GLRLTVGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSA 193
           +QH N  G +  VG  AS+  H          ++    Y S      V+ PN +S Q   
Sbjct: 126 QQHINQYGYQSNVGPDASYYSH----------SNNNQAYNSHDGNGKVNYPNGTSNQNG- 174

Query: 194 SLFALGNPGLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYFANGLAREPNPTAS 367
                G+         A  ++ L+S  R+ LQPY    GG A Y  +    E +P  S
Sbjct: 175 -----GSASKATASGHAKDASWLTS--RKQLQPYGQYHGGGAHYGVDYAMPENSPVYS 225

to top

>LYTM_STAAC (Q5HJ99) Glycyl-glycine endopeptidase lytM precursor (EC 3.4.24.75)|
           (Autolysin lytM)
          Length = 316

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 32/118 (27%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
 Frame = +2

Query: 20  RQHEN--GLRLTVGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSA 193
           +QH N  G +  VG  AS+  H          ++    Y S      V+ PN +S Q   
Sbjct: 126 QQHINQYGYQSNVGPDASYYSH----------SNNNQAYNSHDGNGKVNYPNGTSNQNG- 174

Query: 194 SLFALGNPGLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYFANGLAREPNPTAS 367
                G+         A  ++ L+S  R+ LQPY    GG A Y  +    E +P  S
Sbjct: 175 -----GSASKATASGHAKDASWLTS--RKQLQPYGQYHGGGAHYGVDYAMPENSPVYS 225

to top

>LACY_LACHE (Q7WTB2) Lactose permease (Lactose-proton symporter) (Lactose|
           transport protein) (Lactose transporter) [Includes:
           Putative phosphotransferase enzyme IIA component (EC
           2.7.1.-) (Putative PTS system EIIA component)]
          Length = 638

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = -2

Query: 228 CVNPGFPSANKLADGCWLLVLG 163
           C+NP FP  NK     WL + G
Sbjct: 304 CINPSFPVLNKYIPRKWLFIAG 325

to top

>PACC_EMENI (Q00202) pH-response transcription factor pacC/RIM101|
          Length = 678

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 5/96 (5%)
 Frame = +2

Query: 26  HENGLRLTVGDIASHVQHEIQYG-----GDNPLASPRSQYASQSTQATVHMPNTSSQQPS 190
           +EN   +    +A    H I  G       +P     S +A+  T A   + NTS+  PS
Sbjct: 355 YENDDNVAAAGVAQPGAHYIHNGISYRTTHSPPTQLPSAHATTQTTAGPIISNTSAHSPS 414

Query: 191 ASLFALGNPGLTQPKNSAVFSNALSSPVRRGLQPYH 298
           +S  AL  P   Q   S    + +S P    + P H
Sbjct: 415 SSTPALTPPSSAQSYTSG--RSPISLPSAHRVSPPH 448

to top

>PALI_NEUCR (Q7SFN5) pH-response regulator protein palI/rim-9|
          Length = 705

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
 Frame = +2

Query: 92  GGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQPKNSAVFSNALSSP 271
           G  NP   P  QY++ + +  V +P   S  P   +    + G+  P   AV  +A  SP
Sbjct: 436 GYGNP-EQPGPQYSAYNPRR-VSLPRAESPPPLPGI----DDGMPGP---AVELDA--SP 484

Query: 272 VRRGLQPYHL-DQGGD-AGYFANGLAREPNPTASNDSS 379
             RG+  Y + D   D AG  A   AR P+P   ND++
Sbjct: 485 ANRGVGQYGIRDSDSDVAGMLAMQQARVPDPDRGNDAN 522

to top

>VE2_HPV1A (P03118) Regulatory protein E2|
          Length = 401

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +1

Query: 82  DSVWRRQSVGLSKITICKPKHSGYRAY 162
           D VWR+ S G+  + +   +H GY+ Y
Sbjct: 143 DDVWRKVSSGVDAVGVYYLEHDGYKNY 169

to top

>LYTM_STAAW (Q8NYG1) Glycyl-glycine endopeptidase lytM precursor (EC 3.4.24.75)|
           (Autolysin lytM)
          Length = 316

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
 Frame = +2

Query: 20  RQHEN--GLRLTVGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSA 193
           +QH N  G +  VG  AS+  H          ++    Y S      V+ PN +S Q   
Sbjct: 126 QQHINQYGYQSNVGPDASYYSH----------SNNNQAYNSHDGNGKVNYPNGTSNQ--- 172

Query: 194 SLFALGNPGLTQPKNSAVFSNALS-SPVRRGLQPYHLDQGGDAGYFANGLAREPNPTAS 367
                 N GL     ++  +   S    R+ LQPY    GG A Y  +    E +P  S
Sbjct: 173 ------NGGLASKATASGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPENSPVYS 225

to top

>LYTM_STAAS (Q6GCJ6) Glycyl-glycine endopeptidase lytM precursor (EC 3.4.24.75)|
           (Autolysin lytM)
          Length = 316

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 3/119 (2%)
 Frame = +2

Query: 20  RQHEN--GLRLTVGDIASHVQHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSA 193
           +QH N  G +  VG  AS+  H          ++    Y S      V+ PN +S Q   
Sbjct: 126 QQHINQYGYQSNVGPDASYYSH----------SNNNQAYNSHDGNGKVNYPNGTSNQ--- 172

Query: 194 SLFALGNPGLTQPKNSAVFSNALS-SPVRRGLQPYHLDQGGDAGYFANGLAREPNPTAS 367
                 N GL     ++  +   S    R+ LQPY    GG A Y  +    E +P  S
Sbjct: 173 ------NGGLASKATASGHAKDASWLTSRKQLQPYGQYHGGGAHYGVDYAMPENSPVYS 225

to top

>CATA_ARCFU (O28050) Peroxidase/catalase (EC 1.11.1.6) (Catalase-peroxidase)|
          Length = 741

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +1

Query: 226 AAQELGGLFQRTIQPRAPGPATIPSGSGWGCRLLCERLGPRAESHGFKRLIHGHAFG 396
           AA E+G ++   + P  PG    P GS    R+   R+G   E      +  GHAFG
Sbjct: 200 AATEMGLIY---VNPEGPGGNPDPLGSAQEIRVAFRRMGMNDE-ETVALIAGGHAFG 252

to top

>CAND_DROME (P27398) Calpain D (EC 3.4.22.-) (Calcium-activated neutral|
          proteinase D) (CANP D) (Small optic lobes protein)
          Length = 1594

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = -2

Query: 81 SCWTCEAISPTVSLKPFSC 25
          SC  C  I+PT SLK F+C
Sbjct: 11 SCTKCNTINPTESLKCFNC 29

to top

>YN91_SCHPO (Q9Y808) Hypothetical protein C146.01 in chromosome II|
          Length = 1063

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
 Frame = +2

Query: 113 SPRSQYASQSTQATV--HMPNTSSQQPSASLFALGNPGLTQPKNSAVFSNALSSPVRRGL 286
           +P+    +QS Q+      P+T  QQP  +     NP +    N+ +    L+ PV + L
Sbjct: 300 NPQGNVGAQSLQSMSPQDQPSTQQQQPQRTAAPPNNPNVNATNNNRINIEMLNIPVPKQL 359

to top

>CTND1_HUMAN (O60716) Catenin delta-1 (p120 catenin) (p120(ctn))|
            (Cadherin-associated Src substrate) (CAS) (p120(cas))
          Length = 968

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/81 (25%), Positives = 30/81 (37%)
 Frame = +2

Query: 80   EIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQPKNSAVFSNA 259
            + Q   +N   S  S     ST   +     S ++P      + N G     N+    N 
Sbjct: 848  DFQVNLNNASRSQSSHSYDDSTLPLIDRNQKSDKKPDREEIQMSNMG----SNTKSLDNN 903

Query: 260  LSSPVRRGLQPYHLDQGGDAG 322
             S+P  RG     LD+ GD G
Sbjct: 904  YSTPNERGDHNRTLDRSGDLG 924

to top

>MK15_HUMAN (Q8TD08) Mitogen-activated protein kinase 15 (EC 2.7.11.24)|
           (Extracellular signal-regulated kinase 8)
          Length = 544

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
 Frame = +2

Query: 20  RQHENGLRLTVGDIASHV-QHEIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPS 190
           R HE G++L+V +  S V Q  ++ GG +  +  +       +QA +H P    Q PS
Sbjct: 323 RAHE-GVQLSVPEYRSRVYQMILECGGSSGTSREKGPEGVSPSQAHLHKPRADPQLPS 379

to top

>LARP_DROME (Q9VAW5) La-related protein (dlarp)|
          Length = 1403

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 11/68 (16%)
 Frame = +2

Query: 74   QHEIQYGGDNPLASPRSQYASQ-----------STQATVHMPNTSSQQPSASLFALGNPG 220
            QHE++ GG N   +P  +   Q           ST+AT     T++   SA+      P 
Sbjct: 1332 QHELRRGGSNSGLAPHKRQQQQKPKPGAGSQTGSTRATTSAAATATTAASAATSTAATPA 1391

Query: 221  LTQPKNSA 244
            +T    S+
Sbjct: 1392 VTVSSGSS 1399

to top

>BEM3_YEAST (P32873) GTPase-activating protein BEM3 (Bud emergence protein 3)|
          Length = 1128

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
 Frame = +2

Query: 107 LASPRSQYASQSTQATVHMPNTSSQQP-SASLFALGNPGLTQPKNSAVFSNALSSPVR 277
           LASP +     +++ T+  PN  S+ P    L +  NP     + +AV +N L SP++
Sbjct: 204 LASPAASVTYTTSRITIKSPNKGSKSPLQERLRSPQNPN----RMTAVINNHLHSPLK 257

to top

>UBQL1_MOUSE (Q8R317) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)|
           (PLIC-1)
          Length = 582

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 32/107 (29%), Positives = 42/107 (39%), Gaps = 8/107 (7%)
 Frame = +2

Query: 32  NGLRLTVGDIASHVQH--EIQYGGDNPLASPRSQYASQS------TQATVHMPNTSSQQP 187
           N LR    DI   + +  + Q+GG NP AS  S  +S        T+    +PN  + Q 
Sbjct: 261 NALRRMYTDIQEPMLNAAQEQFGG-NPFASLVSSSSSAEGTQPSRTENRDPLPNPWAPQT 319

Query: 188 SASLFALGNPGLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYF 328
           S S  A G  G T    S     A S+P  +      L  G  A  F
Sbjct: 320 SQSSPASGTTGSTTNTMSTSGGTATSTPAGQSTSGPSLVPGAGASMF 366

to top

>NCOA3_XENLA (O57539) Nuclear receptor coactivator 3 (EC 2.3.1.48) (Retinoid X|
            receptor-interacting coactivator xSRC-3)
          Length = 1391

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = -3

Query: 383  PWMSRLKPWDSARGPSRSQSSLHPHPDPDGMVAGPGARGW 264
            P   R+    +A   SR   S +PHP    M   P  +GW
Sbjct: 1293 PTFGRVSSPPNAMMSSRMAPSQNPHPQTTQMYPSPDMKGW 1332

to top

>DHE1_ARATH (Q43314) Glutamate dehydrogenase 1 (EC 1.4.1.3) (GDH 1)|
          Length = 411

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/48 (31%), Positives = 20/48 (41%)
 Frame = -3

Query: 356 DSARGPSRSQSSLHPHPDPDGMVAGPGARGWIVRWKRPPSSWAASTLG 213
           D+ARGP +     HP  DPD + A      W     + P   A   +G
Sbjct: 59  DNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYGGAKGGIG 106

to top

>5HT6R_MOUSE (Q9R1C8) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin|
           receptor 6)
          Length = 440

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 277 PGPATIPSGSGWGCRLLC 330
           PGP   P GSGW    LC
Sbjct: 17  PGPPPAPGGSGWVAAALC 34

to top

>GRI22_VITVI (Q9M4H4) Ripening-related protein grip22 precursor|
          Length = 220

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 18/58 (31%), Positives = 28/58 (48%)
 Frame = +2

Query: 149 ATVHMPNTSSQQPSASLFALGNPGLTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAG 322
           +T   P  S+ QPS +L   G     +PKN+   S  ++S     L   + ++GGD G
Sbjct: 68  STPSPPPPSTCQPSGTLACKGG----KPKNTYTCSPPITSSTPAVLTNNNFEKGGDGG 121

to top

>AP180_MOUSE (Q61548) Clathrin coat assembly protein AP180 (Clathrin|
            coat-associated protein AP180) (91 kDa
            synaptosomal-associated protein) (Phosphoprotein F1-20)
          Length = 901

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 30/110 (27%), Positives = 41/110 (37%), Gaps = 4/110 (3%)
 Frame = +2

Query: 53   GDIASHVQHEIQYGGDN--PLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNP--G 220
            GD+  +   +   GG N  P  +P +  A    Q TV  P TSS  P A   ++G P  G
Sbjct: 776  GDLQWNAGEKKLTGGANWQPKVTPATWSAGVPPQGTV--PPTSSVPPGAGAPSVGQPGAG 833

Query: 221  LTQPKNSAVFSNALSSPVRRGLQPYHLDQGGDAGYFANGLAREPNPTASN 370
               P +    +     PV    QP      G A      L+  P P   +
Sbjct: 834  FGMPPSGTGMTMMSQQPVMFA-QPMMRPPFGAAAVPGTQLSPSPTPATQS 882

to top

>SYI_PROMM (Q7TUN3) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA|
           ligase) (IleRS)
          Length = 968

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/52 (28%), Positives = 23/52 (44%)
 Frame = +2

Query: 107 LASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQPKNSAVFSNAL 262
           LA    +Y    T  +V++   +++ P     +LGN GL  P N      AL
Sbjct: 206 LAEAELEYPDGHTSPSVYVAFPAAKLPEKLRTSLGNQGLELPNNGLELGQAL 257

to top

>LPSE_RHIME (Q9R9N1) Lipopolysaccharide core biosynthesis glycosyl transferase|
           lpsE (EC 2.-.-.-)
          Length = 340

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 8   EWILRQHENGLRLTVGDIASHVQHEIQYGGDNPL 109
           +W +R  ENGL + +GD     +   Q   DN L
Sbjct: 274 QWFMRDGENGLMVDIGDAEGFARAIEQIVADNSL 307

to top

>KGP24_DROME (Q03043) cGMP-dependent protein kinase, isozyme 2 forms|
           cD4/T1/T3A/T3B (EC 2.7.11.12) (CGK) (Foraging protein)
          Length = 1088

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 27/88 (30%), Positives = 34/88 (38%), Gaps = 1/88 (1%)
 Frame = +2

Query: 110 ASPRSQYASQSTQATVHMPNTSSQQPSASLFA-LGNPGLTQPKNSAVFSNALSSPVRRGL 286
           A  +  Y SQ +    H P+  S QP A   A   +P   QP N+      + S    G 
Sbjct: 296 AQTQGLYTSQGSPVLYHQPSPGSSQPVAIPGATCHSPTQLQPPNTLNLQQQMQSLRISGC 355

Query: 287 QPYHLDQGGDAGYFANGLAREPNPTASN 370
            P     GG A     GL  +PN   SN
Sbjct: 356 TP--SGTGGSATPSPVGLV-DPNFIVSN 380

to top

>APC_XENLA (P70039) Adenomatous polyposis coli homolog (Protein APC)|
          Length = 2829

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
 Frame = +2

Query: 56   DIASHVQH-EIQYGGDNPLASPRSQYASQSTQATVHMPNTSSQQPSASLFALGNPGLTQP 232
            D+ S  Q     Y  ++    P+ +  S ++      PN++ Q       A   PGL +P
Sbjct: 1190 DVPSSAQKPSFPYSNNSSKQKPKKEQVSSNSNTPTPSPNSNRQNQLHPNSAQSRPGLNRP 1249

Query: 233  K 235
            K
Sbjct: 1250 K 1250

to top

>CELR2_HUMAN (Q9HCU4) Cadherin EGF LAG seven-pass G-type receptor 2 precursor|
            (Epidermal growth factor-like 2) (Multiple epidermal
            growth factor-like domains 3) (Flamingo 1)
          Length = 2923

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = -3

Query: 359  WDSARGPSRSQSSLHPHPDPDGMVAGPGARGW 264
            WDS  GP   +  LH  P   G   GPG   W
Sbjct: 2761 WDSLLGPGAERLPLHSTPKDGG--PGPGKAPW 2790

to top

>5HT6R_RAT (P31388) 5-hydroxytryptamine 6 receptor (5-HT-6) (Serotonin|
           receptor 6) (ST-B17)
          Length = 436

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 10/18 (55%), Positives = 10/18 (55%)
 Frame = +1

Query: 277 PGPATIPSGSGWGCRLLC 330
           PGP   P GSGW    LC
Sbjct: 17  PGPPPAPGGSGWVAAALC 34


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,703,793
Number of Sequences: 219361
Number of extensions: 1493184
Number of successful extensions: 5123
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 4882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5120
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result