| Clone Name | baal7k06 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ234562.1|HVU234562 Hordeum vulgare genomic DNA fragment; clone MWG0803 Length = 598 Score = 377 bits (190), Expect = e-101 Identities = 190/190 (100%) Strand = Plus / Plus Query: 208 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 9 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 68 Query: 268 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 69 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 128 Query: 328 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 129 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 188 Query: 388 gcattcggac 397 |||||||||| Sbjct: 189 gcattcggac 198
>emb|AJ234450.1|HVU234450 Hordeum vulgare partial mRNA; clone cMWG0770 Length = 594 Score = 377 bits (190), Expect = e-101 Identities = 190/190 (100%) Strand = Plus / Plus Query: 208 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 267 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 aggaaacccagggttgacgcagcccaagaactcggcggtcttttccaacgcactatccag 62 Query: 268 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 327 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 63 ccccgtgcgccggggcctgcaaccataccatctggatcagggtggggatgcaggctactt 122 Query: 328 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 387 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 123 tgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgactcatccatggacat 182 Query: 388 gcattcggac 397 |||||||||| Sbjct: 183 gcattcggac 192
>ref|XM_450593.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1102 Score = 311 bits (157), Expect = 9e-82 Identities = 331/389 (85%) Strand = Plus / Plus Query: 5 tatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcc 64 |||||||||||||| || ||||||||||||||||||||||||||||| | |||||||||| Sbjct: 362 tatgaatggatcttgaggcagcatgaaaatggcttgaggctgacagttgctgatatagcc 421 Query: 65 tcgcacgtccagcatgagattcagtatggaggcgacaatccgttggcctctccaagatca 124 |||||| ||||||| ||||| ||||||||||| |||||| | | ||||||||||||||| Sbjct: 422 tcgcacatccagcacgagatccagtatggaggtgacaatgcatcagcctctccaagatca 481 Query: 125 caatatgcaagccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaa 184 || ||||||||||||||||||| ||||| |||| ||| |||||||||| |||||||| Sbjct: 482 cagcatgcaagccaaagcactcaagctacagtgcctattcccaacacaatgagccagcag 541 Query: 185 ccatctgcgagcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcg 244 ||||| | | ||||||||| |||||||| |||| ||| |||| |||||||||| ||| Sbjct: 542 ccatcaccaaacttatttgcgctaggaaatacaggattggtgcagtccaagaactcagcg 601 Query: 245 gtcttttccaacgcactatccagccccgtgcgccggggcctgcaaccataccatctggat 304 |||||||| || |||||||| |||||||| |||||| |||||||||||| ||| ||||| Sbjct: 602 gtcttttcaaatgcactatctagccccgttcgccggagcctgcaaccattccacctggag 661 Query: 305 cagggtggggatgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggct 364 |||||||| ||||| || ||||| || |||||| | |||||| | || | |||||| Sbjct: 662 cagggtggcgatgcggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggct 721 Query: 365 tcaaacgactcatccatggacatgcattc 393 || ||||| |||||||||||||||||||| Sbjct: 722 tcgaacgattcatccatggacatgcattc 750
>dbj|AK071395.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023095O09, full insert sequence Length = 1102 Score = 311 bits (157), Expect = 9e-82 Identities = 331/389 (85%) Strand = Plus / Plus Query: 5 tatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcc 64 |||||||||||||| || ||||||||||||||||||||||||||||| | |||||||||| Sbjct: 362 tatgaatggatcttgaggcagcatgaaaatggcttgaggctgacagttgctgatatagcc 421 Query: 65 tcgcacgtccagcatgagattcagtatggaggcgacaatccgttggcctctccaagatca 124 |||||| ||||||| ||||| ||||||||||| |||||| | | ||||||||||||||| Sbjct: 422 tcgcacatccagcacgagatccagtatggaggtgacaatgcatcagcctctccaagatca 481 Query: 125 caatatgcaagccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaa 184 || ||||||||||||||||||| ||||| |||| ||| |||||||||| |||||||| Sbjct: 482 cagcatgcaagccaaagcactcaagctacagtgcctattcccaacacaatgagccagcag 541 Query: 185 ccatctgcgagcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcg 244 ||||| | | ||||||||| |||||||| |||| ||| |||| |||||||||| ||| Sbjct: 542 ccatcaccaaacttatttgcgctaggaaatacaggattggtgcagtccaagaactcagcg 601 Query: 245 gtcttttccaacgcactatccagccccgtgcgccggggcctgcaaccataccatctggat 304 |||||||| || |||||||| |||||||| |||||| |||||||||||| ||| ||||| Sbjct: 602 gtcttttcaaatgcactatctagccccgttcgccggagcctgcaaccattccacctggag 661 Query: 305 cagggtggggatgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggct 364 |||||||| ||||| || ||||| || |||||| | |||||| | || | |||||| Sbjct: 662 cagggtggcgatgcggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggct 721 Query: 365 tcaaacgactcatccatggacatgcattc 393 || ||||| |||||||||||||||||||| Sbjct: 722 tcgaacgattcatccatggacatgcattc 750
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 212 bits (107), Expect = 6e-52 Identities = 266/319 (83%) Strand = Plus / Plus Query: 75 agcatgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaa 134 |||| ||||| ||||||||||| |||||| | | ||||||||||||||||| |||||| Sbjct: 11685796 agcacgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaa 11685855 Query: 135 gccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcga 194 ||||||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | Sbjct: 11685856 gccaaagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaa 11685915 Query: 195 gcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttcca 254 ||||||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| | Sbjct: 11685916 acttatttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaa 11685975 Query: 255 acgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggg 314 | |||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| | Sbjct: 11685976 atgcactatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcg 11686035 Query: 315 atgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgact 374 |||| || ||||| || |||||| | |||||| | || | |||||||| ||||| | Sbjct: 11686036 atgcggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgatt 11686095 Query: 375 catccatggacatgcattc 393 ||||||||||||||||||| Sbjct: 11686096 catccatggacatgcattc 11686114 Score = 103 bits (52), Expect = 4e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 5 tatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcc 64 |||||||||||||| || ||||||||||||||||||||||||||||| | |||||||||| Sbjct: 11684247 tatgaatggatcttgaggcagcatgaaaatggcttgaggctgacagttgctgatatagcc 11684306 Query: 65 tcgcacgtccag 76 |||||| ||||| Sbjct: 11684307 tcgcacatccag 11684318
>dbj|AP005508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0711F01 Length = 193091 Score = 212 bits (107), Expect = 6e-52 Identities = 266/319 (83%) Strand = Plus / Plus Query: 75 agcatgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaa 134 |||| ||||| ||||||||||| |||||| | | ||||||||||||||||| |||||| Sbjct: 120430 agcacgagatccagtatggaggtgacaatgcatcagcctctccaagatcacagcatgcaa 120489 Query: 135 gccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcga 194 ||||||||||||| ||||| |||| ||| |||||||||| |||||||| ||||| | | Sbjct: 120490 gccaaagcactcaagctacagtgcctattcccaacacaatgagccagcagccatcaccaa 120549 Query: 195 gcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttcca 254 ||||||||| |||||||| |||| ||| |||| |||||||||| ||||||||||| | Sbjct: 120550 acttatttgcgctaggaaatacaggattggtgcagtccaagaactcagcggtcttttcaa 120609 Query: 255 acgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggg 314 | |||||||| |||||||| |||||| |||||||||||| ||| ||||| |||||||| | Sbjct: 120610 atgcactatctagccccgttcgccggagcctgcaaccattccacctggagcagggtggcg 120669 Query: 315 atgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgact 374 |||| || ||||| || |||||| | |||||| | || | |||||||| ||||| | Sbjct: 120670 atgcggggtacttcgcaaacggcgttaaccgcgatcaaaactcgacggcttcgaacgatt 120729 Query: 375 catccatggacatgcattc 393 ||||||||||||||||||| Sbjct: 120730 catccatggacatgcattc 120748 Score = 103 bits (52), Expect = 4e-19 Identities = 67/72 (93%) Strand = Plus / Plus Query: 5 tatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcc 64 |||||||||||||| || ||||||||||||||||||||||||||||| | |||||||||| Sbjct: 118881 tatgaatggatcttgaggcagcatgaaaatggcttgaggctgacagttgctgatatagcc 118940 Query: 65 tcgcacgtccag 76 |||||| ||||| Sbjct: 118941 tcgcacatccag 118952
>gb|AY107736.1| Zea mays PCO090313 mRNA sequence Length = 1090 Score = 184 bits (93), Expect = 1e-43 Identities = 318/393 (80%) Strand = Plus / Plus Query: 5 tatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcc 64 |||||||||||| | || ||||| |||||||| |||||||| ||||| | |||| ||||| Sbjct: 408 tatgaatggatcctgaggcagcacgaaaatggtttgaggctaacagttgctgatgtagcc 467 Query: 65 tcgcacgtccagcatgagattcagtatggaggcgacaatccgttggcctctccaagatca 124 || || ||||||||||||||||||||||||| |||||| | | ||||||||||| ||| Sbjct: 468 tcccatatccagcatgagattcagtatggaggtgacaatgcatcagcctctccaaggtca 527 Query: 125 caatatgcaagccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaa 184 ||||| | |||||||||||| | || |||| || ||||||||||||| ||||||| Sbjct: 528 caataccctagccaaagcactgcaccgacaatgcacattcccaacacaagcaaccagcaa 587 Query: 185 ccatctgcgagcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcg 244 ||||| | ||||||||||| ||||||||| |||||||| ||| ||||||| || | Sbjct: 588 ccatcgccaagcttatttgcttcaggaaaccctgggttgacacagtccaagaattccatg 647 Query: 245 gtcttttccaacgcactatccagccccgtgcgccggggcctgcaaccataccatctggat 304 |||||||| | |||| ||||||||||| | || ||| |||||| ||| ||||| || || Sbjct: 648 gtcttttcaagcgcattatccagccccatccggcggagcctgccaccttaccacctagag 707 Query: 305 cagggtggggatgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggct 364 |||| ||||||||||| ||||| |||||||| |||||| ||| ||||||||| Sbjct: 708 caggacggggatgcagggtacttcgcgaacggtgcaagccgcgatgtgaaccccacggct 767 Query: 365 tcaaacgactcatccatggacatgcattcggac 397 || || || || |||||||||||||| |||||| Sbjct: 768 tcgaatgattcgtccatggacatgcactcggac 800
>gb|BT018115.1| Zea mays clone EL01N0553H03.c mRNA sequence Length = 1357 Score = 157 bits (79), Expect = 3e-35 Identities = 262/323 (81%) Strand = Plus / Plus Query: 75 agcatgagattcagtatggaggcgacaatccgttggcctctccaagatcacaatatgcaa 134 |||||||||||||||||||||| |||||| | | ||||||||||| |||||||| | | Sbjct: 770 agcatgagattcagtatggaggtgacaatgcatcagcctctccaaggtcacaatacccta 829 Query: 135 gccaaagcactcaggctaccgtgcatatgcccaacacaagcagccagcaaccatctgcga 194 ||||||||||| | || |||| || ||||||||||||| |||||||||||| | | Sbjct: 830 gccaaagcactgcaccgacaatgcacattcccaacacaagcaaccagcaaccatcgccaa 889 Query: 195 gcttatttgcactaggaaacccagggttgacgcagcccaagaactcggcggtcttttcca 254 |||||||||| | ||||||||| |||||||| ||| ||||||| || ||||||||| | Sbjct: 890 gcttatttgctccaggaaaccctgggttgacacagtccaagaattccatggtcttttcaa 949 Query: 255 acgcactatccagccccgtgcgccggggcctgcaaccataccatctggatcagggtgggg 314 |||| ||||||||||| | || ||| |||||||||| ||||| || || |||| |||| Sbjct: 950 gcgcattatccagccccatccggcggagcctgcaaccttaccacctagagcaggacgggg 1009 Query: 315 atgcaggctactttgcgaacggcttggcccgcgagccgaatcccacggcttcaaacgact 374 ||||||| ||||| |||||||| |||||| ||| ||||||||||| || || | Sbjct: 1010 atgcagggtacttcgcgaacggtgcaagccgcgatgtgaaccccacggcttcgaatgatt 1069 Query: 375 catccatggacatgcattcggac 397 | |||||||||||||| |||||| Sbjct: 1070 cgtccatggacatgcactcggac 1092 Score = 52.0 bits (26), Expect = 0.001 Identities = 53/62 (85%) Strand = Plus / Plus Query: 5 tatgaatggatcttaagacagcatgaaaatggcttgaggctgacagtgggtgatatagcc 64 |||||||||||| | || ||||| |||||||| |||||||| ||||| | |||| ||||| Sbjct: 360 tatgaatggatcctgaggcagcacgaaaatggtttgaggctaacagttgctgatgtagcc 419 Query: 65 tc 66 || Sbjct: 420 tc 421
>ref|XM_482242.1| Oryza sativa (japonica cultivar-group), mRNA Length = 911 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 21 gacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagcatg 80 |||||||||||| |||||||||||| ||||| ||| ||||| || ||| ||||||| | Sbjct: 268 gacagcatgaaattggcttgaggctcacagtatctgacatagcatcccacatccagcacg 327 Query: 81 agattcagtatggaggcgacaat 103 ||||| |||||||||| |||||| Sbjct: 328 agattgagtatggaggtgacaat 350
>ref|XM_507223.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1198_B10.8 mRNA Length = 1009 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 21 gacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagcatg 80 |||||||||||| |||||||||||| ||||| ||| ||||| || ||| ||||||| | Sbjct: 289 gacagcatgaaattggcttgaggctcacagtatctgacatagcatcccacatccagcacg 348 Query: 81 agattcagtatggaggcgacaat 103 ||||| |||||||||| |||||| Sbjct: 349 agattgagtatggaggtgacaat 371
>ref|XM_507222.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1198_B10.8 mRNA Length = 1358 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 21 gacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagcatg 80 |||||||||||| |||||||||||| ||||| ||| ||||| || ||| ||||||| | Sbjct: 374 gacagcatgaaattggcttgaggctcacagtatctgacatagcatcccacatccagcacg 433 Query: 81 agattcagtatggaggcgacaat 103 ||||| |||||||||| |||||| Sbjct: 434 agattgagtatggaggtgacaat 456
>dbj|AK109817.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-148-A02, full insert sequence Length = 1358 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 21 gacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagcatg 80 |||||||||||| |||||||||||| ||||| ||| ||||| || ||| ||||||| | Sbjct: 374 gacagcatgaaattggcttgaggctcacagtatctgacatagcatcccacatccagcacg 433 Query: 81 agattcagtatggaggcgacaat 103 ||||| |||||||||| |||||| Sbjct: 434 agattgagtatggaggtgacaat 456
>dbj|AK098973.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089E18, full insert sequence Length = 913 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 21 gacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagcatg 80 |||||||||||| |||||||||||| ||||| ||| ||||| || ||| ||||||| | Sbjct: 268 gacagcatgaaattggcttgaggctcacagtatctgacatagcatcccacatccagcacg 327 Query: 81 agattcagtatggaggcgacaat 103 ||||| |||||||||| |||||| Sbjct: 328 agattgagtatggaggtgacaat 350
>dbj|AK060114.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-D12, full insert sequence Length = 1009 Score = 69.9 bits (35), Expect = 6e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 21 gacagcatgaaaatggcttgaggctgacagtgggtgatatagcctcgcacgtccagcatg 80 |||||||||||| |||||||||||| ||||| ||| ||||| || ||| ||||||| | Sbjct: 289 gacagcatgaaattggcttgaggctcacagtatctgacatagcatcccacatccagcacg 348 Query: 81 agattcagtatggaggcgacaat 103 ||||| |||||||||| |||||| Sbjct: 349 agattgagtatggaggtgacaat 371
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 21 gacagcatgaaaatggcttgaggctgacagt 51 |||||||||||| |||||||||||| ||||| Sbjct: 18951508 gacagcatgaaattggcttgaggctcacagt 18951538
>dbj|AP003947.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1198_B10 Length = 119768 Score = 46.1 bits (23), Expect = 0.086 Identities = 29/31 (93%) Strand = Plus / Plus Query: 21 gacagcatgaaaatggcttgaggctgacagt 51 |||||||||||| |||||||||||| ||||| Sbjct: 36428 gacagcatgaaattggcttgaggctcacagt 36458
>gb|AC006552.7|AC006552 Homo sapiens chromosome 4 clone C0084L10 map 4p16, complete sequence Length = 185393 Score = 46.1 bits (23), Expect = 0.086 Identities = 23/23 (100%) Strand = Plus / Minus Query: 25 gcatgaaaatggcttgaggctga 47 ||||||||||||||||||||||| Sbjct: 132570 gcatgaaaatggcttgaggctga 132548
>emb|BX548019.36| Zebrafish DNA sequence from clone DKEY-20D1 in linkage group 6, complete sequence Length = 202848 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 19 aagacagcatgaaaatggct 38 |||||||||||||||||||| Sbjct: 121819 aagacagcatgaaaatggct 121800
>gb|AC131723.1| Mus musculus BAC clone RP23-144E24 from 1, complete sequence Length = 200656 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 115 tccaagatcacaatatgcaa 134 |||||||||||||||||||| Sbjct: 112070 tccaagatcacaatatgcaa 112051
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 5.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 270 ccgtgcgccggggcctgcaaccat 293 ||||||||||||||||||| |||| Sbjct: 715484 ccgtgcgccggggcctgcacccat 715507
>emb|AL135793.13| Human DNA sequence from clone RP11-296H2 on chromosome 10 Contains the 3' end of the TACC2 gene for transforming, acidic coiled-coil containing protein 2 (AZU-1), the gene for a novel protein (FLJ25359) and two CpG islands, complete sequence Length = 213861 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 ggctgacagtgggtgatata 61 |||||||||||||||||||| Sbjct: 135741 ggctgacagtgggtgatata 135722
>gb|AC016919.15| Homo sapiens 3 BAC RP11-220J13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165714 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 gcaagccaaagcactcaggc 150 |||||||||||||||||||| Sbjct: 140245 gcaagccaaagcactcaggc 140226
>emb|X58831.1|CSGDHANC C.sorokiniana gdhANC gene for NADP-specific glutamate dehydrogenase (ANC=Ammonium-inducible, Nuclear encoded, Chloroplastic isoenzyme) Length = 9872 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 cgactcatccatggacatgc 389 |||||||||||||||||||| Sbjct: 9375 cgactcatccatggacatgc 9356
>emb|BX571699.10| Zebrafish DNA sequence from clone DKEYP-116G9 in linkage group 6, complete sequence Length = 173467 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aagacagcatgaaaatggct 38 |||||||||||||||||||| Sbjct: 22637 aagacagcatgaaaatggct 22656
>emb|BX004878.8| Zebrafish DNA sequence from clone DKEY-11H2 in linkage group 6, complete sequence Length = 254657 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 aagacagcatgaaaatggct 38 |||||||||||||||||||| Sbjct: 184424 aagacagcatgaaaatggct 184443
>emb|AL929457.12| Zebrafish DNA sequence from clone CH211-153I8 in linkage group 14, complete sequence Length = 164299 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gaggctgacagtgggtgata 59 |||||||||||||||||||| Sbjct: 159286 gaggctgacagtgggtgata 159267
>emb|BX510330.20| Zebrafish DNA sequence from clone DKEYP-82B3 in linkage group 13, complete sequence Length = 96887 Score = 40.1 bits (20), Expect = 5.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 gaggctgacagtgggtgata 59 |||||||||||||||||||| Sbjct: 60479 gaggctgacagtgggtgata 60460 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,457,559 Number of Sequences: 3902068 Number of extensions: 2457559 Number of successful extensions: 45189 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 27 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 45124 Number of HSP's gapped (non-prelim): 65 length of query: 397 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 375 effective length of database: 17,147,199,772 effective search space: 6430199914500 effective search space used: 6430199914500 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)