ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7i24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1OCTN3_MOUSE (Q9WTN6) Organic cation/carnitine transporter 3 (Sol... 28 8.8

>OCTN3_MOUSE (Q9WTN6) Organic cation/carnitine transporter 3 (Solute carrier|
           family 22 member 21) (Solute carrier family 22 member 9)
          Length = 564

 Score = 28.1 bits (61), Expect = 8.8
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 298 NVVSAPVLGFPFILTSAMFIYL*L*VCMFGSFGF 399
           N V+A VLG   +  S   I+  L VC+F +FGF
Sbjct: 210 NYVAAFVLGTEMLSKSVRIIFATLGVCIFFAFGF 243


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,983,647
Number of Sequences: 219361
Number of extensions: 372761
Number of successful extensions: 1903
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1903
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2286875994
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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