ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7i23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|L28094.1|BLYCDNA Barley mRNA sequence Length = 942 Score = 1120 bits (565), Expect = 0.0 Identities = 581/585 (99%), Gaps = 1/585 (0%) Strand = Plus / Plus Query: 12 gccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaagaaccccaagaac 71 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 gccttcttcgtctccatgggcgagttccgcgaggagttcaagcagaagaaccccaagaac 296 Query: 72 aagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagcttgagcgaatcc 131 |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 297 aagtccgtcgcccccgtcggcaaagcggccggtgagaggtggaagagcttgagcgaaccc 356 Query: 132 gaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccatt 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 357 gaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccatt 416 Query: 192 gctgcctacaacaagggcgagagcactgctgctgccccaaagaaggccgctgccaaggag 251 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 417 gctgcctacaacaagggcgagagcactgctgctgccccaaagaaggccgctgccaaggag 476 Query: 252 gtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaatgacgacgat 311 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 gtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaatgacgacgat 536 Query: 312 gacgatgagggtagcgatgaggacgaggatgacgacgagtaaagaagaagcatctttgct 371 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 gacgatgagggtagcgatgaggacgaggatgacgacgagtaaagaagaagcatctttgct 596 Query: 372 ccggcggacaaggcgggagctgctgcgcgaggcccctgagctgtgggtggtggttgtcat 431 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 597 ccggcggacaaggcgggagctgctgcgcgaggcccctgagctgtgggtggtggttgtcat 656 Query: 432 aaggagcctatccatctccactagaattatcccaagtttcacttcacaccgtcatgttgt 491 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 657 aaggagcctatccatctccactagaattatcccaagtttcacttcacaccgtcatgttgt 716 Query: 492 tttacctttttcatgtcgtccgtccatccgtcctgctataacggatagcgctccctgttg 551 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 717 tttacctttttcatgtcgtccgtccatccgtcctgctataacggatagcgctccctgttg 776 Query: 552 gcgcccccgccggcggggtgctccttgcggtgttagggtgtatgt 596 ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 777 gcg-ccccgccggcggggtgctccttgcggtgttagggtgtatgt 820
>emb|Z50799.1|HVHHMG12 H.vulgare mRNA for HMG1/2-like protein Length = 974 Score = 1078 bits (544), Expect = 0.0 Identities = 583/596 (97%) Strand = Plus / Plus Query: 1 gggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaaga 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 219 gggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaaga 278 Query: 61 accccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagct 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 accccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagct 338 Query: 121 tgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtaca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 339 tgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtaca 398 Query: 181 acaaggccattgctgcctacaacaagggcgagagcactgctgctgccccaaagaaggccg 240 |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 399 acaaggccattgcttcctacaacaagggcgagagcactactgctgccccaaagaaggcct 458 Query: 241 ctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatca 300 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 459 cttccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatca 518 Query: 301 atgacgacgatgacgatgagggtagcgatgaggacgaggatgacgacgagtaaagaagaa 360 ||||||||||||||||||||||||||||||||| |||||||| || ||||| |||||||| Sbjct: 519 atgacgacgatgacgatgagggtagcgatgaggccgaggatgccgccgagtgaagaagaa 578 Query: 361 gcatctttgctccggcggacaaggcgggagctgctgcgcgaggcccctgagctgtgggtg 420 |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 579 gcatctttgctccggcggacaaggcgggagcttctgcgcgaggcccctgaactgtgggtg 638 Query: 421 gtggttgtcataaggagcctatccatctccactagaattatcccaagtttcacttcacac 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 639 gtggttgtcataaggagcctatccatctccactagaattatcccaagtttcacttcacac 698 Query: 481 cgtcatgttgttttacctttttcatgtcgtccgtccatccgtcctgctataacggatagc 540 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 699 cgtcatgttgttttacctttttcatgtcgtccgtccatccgtcctgcaataacggatagc 758 Query: 541 gctccctgttggcgcccccgccggcggggtgctccttgcggtgttagggtgtatgt 596 ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 759 gctccctgttggcccccccgccggcggggtgctccttgcggtgttagggcgtatgt 814
>emb|Z11540.1|TAHMGW T.aestivum mRNA for high mobility group protein (HMGW) Length = 923 Score = 720 bits (363), Expect = 0.0 Identities = 476/512 (92%), Gaps = 15/512 (2%) Strand = Plus / Plus Query: 11 cgccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaagaaccccaagaa 70 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 217 cgccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaagaaccccaagaa 276 Query: 71 caagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagcttgagcgaatc 130 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 caagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagcttgagcgaatc 336 Query: 131 cgaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccat 190 ||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 337 ggaaaaggccccctatgtggccaaggccaacaagctcaagggcgagtacaacaaggccat 396 Query: 191 tgctgcctacaacaagggcgagagc---actgctgctgccccaaagaaggccgctgccaa 247 ||||||||||||||||||||||||| |||||||||||||||||||||| || ||||| Sbjct: 397 tgctgcctacaacaagggcgagagcgctgctgctgctgccccaaagaaggctgcggccaa 456 Query: 248 ggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaatgacga 307 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 457 ggaggtagaggaggaagatgaggaggaatctgacaagtccaagtcggagatcaatgacga 516 Query: 308 cgatgacgatgagggtagcgatgaggacgaggatgacgacgagtaaagaagaagcatctt 367 ||||||||||||||| ||||||||||||||||| || ||||||| ||||||| ||||||| Sbjct: 517 cgatgacgatgagggcagcgatgaggacgaggacgatgacgagtgaagaagacgcatctt 576 Query: 368 --------tgctccggcggacaaggcgggagctgctgcgcgag---gcccctgagctgtg 416 |||||||||||||||| |||||||||||| ||||| | ||||||||||| Sbjct: 577 gtcaaggctgctccggcggacaagtcgggagctgctgtgcgagaacggacctgagctgtg 636 Query: 417 ggtggtggttgtcataaggagcctatccatctccactagaattatcccaagtttcacttc 476 | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 637 tgcggtgg-tgtcataaggagcctatccatctccactagaattatcccaagtttcacttc 695 Query: 477 acaccgtcatgttgttttacctttttcatgtc 508 ||| ||| ||||||||||||||||||| |||| Sbjct: 696 acatcgtgatgttgttttacctttttcctgtc 727 Score = 81.8 bits (41), Expect = 2e-12 Identities = 44/45 (97%) Strand = Plus / Plus Query: 521 gtcctgctataacggatagcgctccctgttggcgcccccgccggc 565 |||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 731 gtcctgctataacggatagcgctccctgttggcgccgccgccggc 775
>gb|AF531431.1| Zea mays nucleosome/chromatin assembly factor group D protein (nfd103) mRNA, complete cds Length = 887 Score = 262 bits (132), Expect = 1e-66 Identities = 296/351 (84%), Gaps = 6/351 (1%) Strand = Plus / Plus Query: 1 gggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaaga 60 |||| |||||||| |||||||| ||||||| || || ||| ||||||||||| |||||| Sbjct: 234 gggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggagttcaaggagaaga 293 Query: 61 accccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagct 120 |||| ||||||||||| ||||| || || || ||||| || || || |||||||| | Sbjct: 294 accctaagaacaagtctgtcgctgcggtggggaaagctgctggcgacaggtggaaatccc 353 Query: 121 tgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtaca 180 ||||||| || || ||||| |||| ||| |||||||| |||||||||||| |||||||| Sbjct: 354 tgagcgagtcggacaaggctccctatgtagccaaggctaacaagctcaagctcgagtaca 413 Query: 181 acaaggccattgctgcctacaacaagggcgagagcactgctgctgccccaaagaaggccg 240 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 414 acaaggccatcgctgcctacaacaagggcgagagcactgcagct------aagaaggctc 467 Query: 241 ctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatca 300 |||||||||||| ||||||||||||||| ||||| || |||||||||||||||||| ||| Sbjct: 468 ctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtccaagtcggaggtca 527 Query: 301 atgacgacgatgacgatgagggtagcgatgaggacgaggatgacgacgagt 351 ||||||| ||||| || |||||||| || ||||| || ||||| ||||||| Sbjct: 528 atgacgaggatgatgaagagggtagtgaggaggatgaagatgatgacgagt 578 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 525 tgctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||||| ||||||||| Sbjct: 732 tgctataacggatagcgctcctcgttggcgcc 763
>emb|X66077.1|ZMMNB1B Z.mays MNB1b mRNA for DNA-binding protein Length = 918 Score = 262 bits (132), Expect = 1e-66 Identities = 296/351 (84%), Gaps = 6/351 (1%) Strand = Plus / Plus Query: 1 gggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaaga 60 |||| |||||||| |||||||| ||||||| || || ||| ||||||||||| |||||| Sbjct: 163 gggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggagttcaaggagaaga 222 Query: 61 accccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagct 120 |||| ||||||||||| ||||| || || || ||||| || || || |||||||| | Sbjct: 223 accctaagaacaagtctgtcgctgcggtggggaaagctgctggcgacaggtggaaatccc 282 Query: 121 tgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtaca 180 ||||||| || || ||||| |||| ||| |||||||| |||||||||||| |||||||| Sbjct: 283 tgagcgagtcggacaaggctccctatgtagccaaggctaacaagctcaagctcgagtaca 342 Query: 181 acaaggccattgctgcctacaacaagggcgagagcactgctgctgccccaaagaaggccg 240 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 343 acaaggccatcgctgcctacaacaagggcgagagcactgcagct------aagaaggctc 396 Query: 241 ctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatca 300 |||||||||||| ||||||||||||||| ||||| || |||||||||||||||||| ||| Sbjct: 397 ctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtccaagtcggaggtca 456 Query: 301 atgacgacgatgacgatgagggtagcgatgaggacgaggatgacgacgagt 351 ||||||| ||||| || |||||||| || ||||| || ||||| ||||||| Sbjct: 457 atgacgaggatgatgaagagggtagtgaggaggatgaagatgatgacgagt 507 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 525 tgctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||||| ||||||||| Sbjct: 661 tgctataacggatagcgctcctcgttggcgcc 692
>emb|X58282.1|ZMHMGPMR Maize mRNA for a high mobility group protein Length = 885 Score = 262 bits (132), Expect = 1e-66 Identities = 296/351 (84%), Gaps = 6/351 (1%) Strand = Plus / Plus Query: 1 gggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaaga 60 |||| |||||||| |||||||| ||||||| || || ||| ||||||||||| |||||| Sbjct: 167 gggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggagttcaaggagaaga 226 Query: 61 accccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagct 120 |||| ||||||||||| ||||| || || || ||||| || || || |||||||| | Sbjct: 227 accctaagaacaagtctgtcgctgcggtggggaaagctgctggcgacaggtggaaatccc 286 Query: 121 tgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtaca 180 ||||||| || || ||||| |||| ||| |||||||| |||||||||||| |||||||| Sbjct: 287 tgagcgagtcggacaaggctccctatgtagccaaggctaacaagctcaagctcgagtaca 346 Query: 181 acaaggccattgctgcctacaacaagggcgagagcactgctgctgccccaaagaaggccg 240 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 347 acaaggccatcgctgcctacaacaagggcgagagcactgcagct------aagaaggctc 400 Query: 241 ctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatca 300 |||||||||||| ||||||||||||||| ||||| || |||||||||||||||||| ||| Sbjct: 401 ctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtccaagtcggaggtca 460 Query: 301 atgacgacgatgacgatgagggtagcgatgaggacgaggatgacgacgagt 351 ||||||| ||||| || |||||||| || ||||| || ||||| ||||||| Sbjct: 461 atgacgaggatgatgaagagggtagtgaggaggatgaagatgatgacgagt 511 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 525 tgctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||||| ||||||||| Sbjct: 665 tgctataacggatagcgctcctcgttggcgcc 696
>gb|AY103575.1| Zea mays PCO080122 mRNA sequence Length = 1153 Score = 262 bits (132), Expect = 1e-66 Identities = 296/351 (84%), Gaps = 6/351 (1%) Strand = Plus / Plus Query: 1 gggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaaga 60 |||| |||||||| |||||||| ||||||| || || ||| ||||||||||| |||||| Sbjct: 355 gggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggagttcaaggagaaga 414 Query: 61 accccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagct 120 |||| ||||||||||| ||||| || || || ||||| || || || |||||||| | Sbjct: 415 accctaagaacaagtctgtcgctgcggtggggaaagctgctggcgacaggtggaaatccc 474 Query: 121 tgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtaca 180 ||||||| || || ||||| |||| ||| |||||||| |||||||||||| |||||||| Sbjct: 475 tgagcgagtcggacaaggctccctatgtagccaaggctaacaagctcaagctcgagtaca 534 Query: 181 acaaggccattgctgcctacaacaagggcgagagcactgctgctgccccaaagaaggccg 240 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 535 acaaggccatcgctgcctacaacaagggcgagagcactgcagct------aagaaggctc 588 Query: 241 ctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatca 300 |||||||||||| ||||||||||||||| ||||| || |||||||||||||||||| ||| Sbjct: 589 ctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtccaagtcggaggtca 648 Query: 301 atgacgacgatgacgatgagggtagcgatgaggacgaggatgacgacgagt 351 ||||||| ||||| || |||||||| || ||||| || ||||| ||||||| Sbjct: 649 atgacgaggatgatgaagagggtagtgaggaggatgaagatgatgacgagt 699 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 525 tgctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||||| ||||||||| Sbjct: 853 tgctataacggatagcgctcctcgttggcgcc 884
>gb|BT016280.1| Zea mays clone Contig113 mRNA sequence Length = 817 Score = 246 bits (124), Expect = 7e-62 Identities = 294/351 (83%), Gaps = 6/351 (1%) Strand = Plus / Plus Query: 1 gggcgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaaga 60 |||| |||||||| |||||||| ||||||| || || ||| ||||||||||| |||||| Sbjct: 464 gggctcccagcgctttcttcgtgttcatggaggaatttcgcaaggagttcaaggagaaga 523 Query: 61 accccaagaacaagtccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagct 120 |||| ||||||||||| ||||| || || || ||||| || || || |||||||| | Sbjct: 524 accctaagaacaagtctgtcgctgcggtggggaaagctgctggcgacaggtggaaatccc 583 Query: 121 tgagcgaatccgaaaaggccccctttgttgccaaggccaacaagctcaagggcgagtaca 180 ||||||| || || ||||| |||| ||| |||||||| |||||||||||| ||| |||| Sbjct: 584 tgagcgagtcggacaaggctccctatgtagccaaggctaacaagctcaagctcgactaca 643 Query: 181 acaaggccattgctgcctacaacaagggcgagagcactgctgctgccccaaagaaggccg 240 |||||||||| ||||||||||||||||||||||||||||| ||| |||||||| Sbjct: 644 acaaggccatcgctgcctacaacaagggcgagagcactgcagct------aagaaggctc 697 Query: 241 ctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatca 300 |||||||||||| |||||||||| |||| ||||| || |||||||||||||||||| ||| Sbjct: 698 ctgccaaggaggaagaggaggaacatgaagaggagtctgacaagtccaagtcggaggtca 757 Query: 301 atgacgacgatgacgatgagggtagcgatgaggacgaggatgacgacgagt 351 ||||||| ||||| || |||||||| || ||||| || ||||| ||||||| Sbjct: 758 atgacgaggatgatgaagagggtagtgaggaggatgaagatgatgacgagt 808
>gb|AF541859.1| Oryza sativa (indica cultivar-group) HMG1 protein (HMG1) mRNA, complete cds Length = 918 Score = 232 bits (117), Expect = 1e-57 Identities = 281/337 (83%), Gaps = 9/337 (2%) Strand = Plus / Plus Query: 15 ttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaagaaccccaagaacaag 74 |||||||| || |||| |||||||| ||||||||||| |||||||||||||||| || Sbjct: 268 ttcttcgtttttatggaggagttccgtaaggagttcaaggagaagaaccccaagaataaa 327 Query: 75 tccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagcttgagcgaatccgaa 134 || ||||| || || || ||||| |||||||| |||||||| | ||| |||| | || Sbjct: 328 tctgtcgctgctgtaggaaaagcagccggtgataggtggaaatccctgaccgaagcggac 387 Query: 135 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 194 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 388 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 447 Query: 195 gcctacaacaagggcgagagcactgctgctgccccaaagaaggccgctgccaaggaggta 254 ||||||||||||||||||||||||| | |||||||| | |||||||||| | Sbjct: 448 gcctacaacaagggcgagagcactg---------ccaagaaggcacccgccaaggaggaa 498 Query: 255 gaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaatgacgacgatgac 314 |||||||| || ||||||||||| |||||||||||||| ||| ||||||| || |||||| Sbjct: 499 gaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaatgatgaggatgac 558 Query: 315 gatgagggtagcgatgaggacgaggatgacgacgagt 351 || ||||| ||||| ||||| || || || ||||||| Sbjct: 559 gacgagggcagcgaagaggatgaagacgatgacgagt 595 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 527 ctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||| |||||||||| Sbjct: 735 ctataacggatagcgctccttgttggcgcc 764
>dbj|AK062226.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-047-C12, full insert sequence Length = 913 Score = 232 bits (117), Expect = 1e-57 Identities = 281/337 (83%), Gaps = 9/337 (2%) Strand = Plus / Plus Query: 15 ttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaagaaccccaagaacaag 74 |||||||| || |||| |||||||| ||||||||||| |||||||||||||||| || Sbjct: 292 ttcttcgtttttatggaggagttccgtaaggagttcaaggagaagaaccccaagaataaa 351 Query: 75 tccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagcttgagcgaatccgaa 134 || ||||| || || || ||||| |||||||| |||||||| | ||| |||| | || Sbjct: 352 tctgtcgctgctgtaggaaaagcagccggtgataggtggaaatccctgaccgaagcggac 411 Query: 135 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 194 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 412 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 471 Query: 195 gcctacaacaagggcgagagcactgctgctgccccaaagaaggccgctgccaaggaggta 254 ||||||||||||||||||||||||| | |||||||| | |||||||||| | Sbjct: 472 gcctacaacaagggcgagagcactg---------ccaagaaggcacccgccaaggaggaa 522 Query: 255 gaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaatgacgacgatgac 314 |||||||| || ||||||||||| |||||||||||||| ||| ||||||| || |||||| Sbjct: 523 gaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaatgatgaggatgac 582 Query: 315 gatgagggtagcgatgaggacgaggatgacgacgagt 351 || ||||| ||||| ||||| || || || ||||||| Sbjct: 583 gacgagggcagcgaagaggatgaagacgatgacgagt 619 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 527 ctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||| |||||||||| Sbjct: 759 ctataacggatagcgctccttgttggcgcc 788
>gb|AF093632.1|AF093632 Oryza sativa high mobility group protein (HMG) mRNA, complete cds Length = 869 Score = 232 bits (117), Expect = 1e-57 Identities = 281/337 (83%), Gaps = 9/337 (2%) Strand = Plus / Plus Query: 15 ttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaagaaccccaagaacaag 74 |||||||| || |||| |||||||| ||||||||||| |||||||||||||||| || Sbjct: 219 ttcttcgtttttatggaggagttccgtaaggagttcaaggagaagaaccccaagaataaa 278 Query: 75 tccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagcttgagcgaatccgaa 134 || ||||| || || || ||||| |||||||| |||||||| | ||| |||| | || Sbjct: 279 tctgtcgctgctgtaggaaaagcagccggtgataggtggaaatccctgaccgaagcggac 338 Query: 135 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 194 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 339 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 398 Query: 195 gcctacaacaagggcgagagcactgctgctgccccaaagaaggccgctgccaaggaggta 254 ||||||||||||||||||||||||| | |||||||| | |||||||||| | Sbjct: 399 gcctacaacaagggcgagagcactg---------ccaagaaggcacccgccaaggaggaa 449 Query: 255 gaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaatgacgacgatgac 314 |||||||| || ||||||||||| |||||||||||||| ||| ||||||| || |||||| Sbjct: 450 gaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaatgatgaggatgac 509 Query: 315 gatgagggtagcgatgaggacgaggatgacgacgagt 351 || ||||| ||||| ||||| || || || ||||||| Sbjct: 510 gacgagggcagcgaagaggatgaagacgatgacgagt 546 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 527 ctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||| |||||||||| Sbjct: 686 ctataacggatagcgctccttgttggcgcc 715
>dbj|AK068898.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170E23, full insert sequence Length = 998 Score = 224 bits (113), Expect = 3e-55 Identities = 280/337 (83%), Gaps = 9/337 (2%) Strand = Plus / Plus Query: 15 ttcttcgtcttcatgggcgagttccgcgaggagttcaagcagaagaaccccaagaacaag 74 |||||||| || |||| |||||||| |||||||||| |||||||||||||||| || Sbjct: 377 ttcttcgtttttatggaggagttccgtagggagttcaaggagaagaaccccaagaataaa 436 Query: 75 tccgtcgccgccgtcggcaaagcggccggtgagaggtggaagagcttgagcgaatccgaa 134 || ||||| || || || ||||| |||||||| |||||||| | ||| |||| | || Sbjct: 437 tctgtcgctgctgtaggaaaagcagccggtgataggtggaaatccctgaccgaagcggac 496 Query: 135 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 194 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 497 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 556 Query: 195 gcctacaacaagggcgagagcactgctgctgccccaaagaaggccgctgccaaggaggta 254 ||||||||||||||||||||||||| | |||||||| | |||||||||| | Sbjct: 557 gcctacaacaagggcgagagcactg---------ccaagaaggcacccgccaaggaggaa 607 Query: 255 gaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaatgacgacgatgac 314 |||||||| || ||||||||||| |||||||||||||| ||| ||||||| || |||||| Sbjct: 608 gaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaatgatgaggatgac 667 Query: 315 gatgagggtagcgatgaggacgaggatgacgacgagt 351 || ||||| ||||| ||||| || || || ||||||| Sbjct: 668 gacgagggcagcgaagaggatgaagacgatgacgagt 704 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 527 ctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||| |||||||||| Sbjct: 844 ctataacggatagcgctccttgttggcgcc 873
>gb|AY262827.1| Oryza sativa (indica cultivar-group) HMGB1 gene, complete cds Length = 3659 Score = 123 bits (62), Expect = 7e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 135 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 194 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 2472 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 2531 Query: 195 gcctacaacaagggcgag 212 |||||||||||||||||| Sbjct: 2532 gcctacaacaagggcgag 2549 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 243 gccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaat 302 |||||||||| ||||||||| || ||||||||||| |||||||||||||| ||| ||||| Sbjct: 2658 gccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaat 2717 Query: 303 gacgacgatgacgatgagggtagcgatgagg 333 || || |||||||| ||||| ||||| |||| Sbjct: 2718 gatgaggatgacgacgagggcagcgaagagg 2748 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 527 ctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||| |||||||||| Sbjct: 3191 ctataacggatagcgctccttgttggcgcc 3220 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 33 gagttccgcgaggagttcaagcagaagaaccccaagaa 70 |||||||| ||||||||||| |||||||||||||||| Sbjct: 2114 gagttccgtaaggagttcaaggagaagaaccccaagaa 2151
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 123 bits (62), Expect = 7e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 135 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 194 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 30478333 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 30478392 Query: 195 gcctacaacaagggcgag 212 |||||||||||||||||| Sbjct: 30478393 gcctacaacaagggcgag 30478410 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 243 gccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaat 302 |||||||||| ||||||||| || ||||||||||| |||||||||||||| ||| ||||| Sbjct: 30478519 gccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaat 30478578 Query: 303 gacgacgatgacgatgagggtagcgatgagg 333 || || |||||||| ||||| ||||| |||| Sbjct: 30478579 gatgaggatgacgacgagggcagcgaagagg 30478609 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 527 ctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||| |||||||||| Sbjct: 30479065 ctataacggatagcgctccttgttggcgcc 30479094 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 33 gagttccgcgaggagttcaagcagaagaaccccaagaa 70 |||||||| ||||||||||| |||||||||||||||| Sbjct: 30477975 gagttccgtaaggagttcaaggagaagaaccccaagaa 30478012 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 caagtccgtcgccgccgtcggc 92 |||||||||||||||||||||| Sbjct: 22176818 caagtccgtcgccgccgtcggc 22176839 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 19591920 gaggaggaagatgaggagga 19591901
>dbj|AP004685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0017G10 Length = 166700 Score = 123 bits (62), Expect = 7e-25 Identities = 74/78 (94%) Strand = Plus / Plus Query: 135 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 194 ||||| |||| ||| |||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 115694 aaggctccctatgtagccaaggccaacaagctcaaggccgagtacaacaaggccattgct 115753 Query: 195 gcctacaacaagggcgag 212 |||||||||||||||||| Sbjct: 115754 gcctacaacaagggcgag 115771 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/91 (87%) Strand = Plus / Plus Query: 243 gccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggagatcaat 302 |||||||||| ||||||||| || ||||||||||| |||||||||||||| ||| ||||| Sbjct: 115880 gccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgaggtcaat 115939 Query: 303 gacgacgatgacgatgagggtagcgatgagg 333 || || |||||||| ||||| ||||| |||| Sbjct: 115940 gatgaggatgacgacgagggcagcgaagagg 115970 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 527 ctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||| |||||||||| Sbjct: 116426 ctataacggatagcgctccttgttggcgcc 116455 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 33 gagttccgcgaggagttcaagcagaagaaccccaagaa 70 |||||||| ||||||||||| |||||||||||||||| Sbjct: 115336 gagttccgtaaggagttcaaggagaagaaccccaagaa 115373
>gb|DQ083221.1| Oryza sativa (indica cultivar-group) clone 5B2A67 mRNA sequence Length = 395 Score = 117 bits (59), Expect = 4e-23 Identities = 118/139 (84%), Gaps = 9/139 (6%) Strand = Plus / Plus Query: 178 acaacaaggccattgctgcctacaacaagggcgagagcactgctgctgccccaaagaagg 237 |||||||||||||||||||||||||||||||||||||||||| | ||||||| Sbjct: 1 acaacaaggccattgctgcctacaacaagggcgagagcactg---------ccaagaagg 51 Query: 238 ccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaagtcggaga 297 | | |||||||||| ||||||||| || ||||||||||| |||||||||||||| ||| Sbjct: 52 cacccgccaaggaggaagaggaggacgacgaggaggaatctgacaagtccaagtccgagg 111 Query: 298 tcaatgacgacgatgacga 316 ||||||| || |||||||| Sbjct: 112 tcaatgatgaggatgacga 130 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 527 ctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||| |||||||||| Sbjct: 308 ctataacggatagcgctccttgttggcgcc 337
>emb|AJ131373.1|ZMA131373 Zea mays hmga gene, exons 1-7 Length = 2133 Score = 109 bits (55), Expect = 1e-20 Identities = 85/95 (89%) Strand = Plus / Plus Query: 231 aagaaggccgctgccaaggaggtagaggaggaagatgaggaggaatccgacaagtccaag 290 |||||||| |||||||||||| ||||||||||||||| ||||| || |||||||||||| Sbjct: 982 aagaaggctcctgccaaggaggaagaggaggaagatgaagaggagtctgacaagtccaag 1041 Query: 291 tcggagatcaatgacgacgatgacgatgagggtag 325 |||||| |||||||||| ||||| || |||||||| Sbjct: 1042 tcggaggtcaatgacgaggatgatgaagagggtag 1076 Score = 99.6 bits (50), Expect = 1e-17 Identities = 71/78 (91%) Strand = Plus / Plus Query: 135 aaggccccctttgttgccaaggccaacaagctcaagggcgagtacaacaaggccattgct 194 ||||| |||| ||| |||||||| |||||||||||| |||||||||||||||||| ||| Sbjct: 781 aaggctccctatgtagccaaggctaacaagctcaagctcgagtacaacaaggccatcgct 840 Query: 195 gcctacaacaagggcgag 212 |||||||||||||||||| Sbjct: 841 gcctacaacaagggcgag 858 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 43 aggagttcaagcagaagaaccccaagaacaagtccgtcgc 82 ||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 466 aggagttcaaggagaagaaccctaagaacaagtctgtcgc 505 Score = 48.1 bits (24), Expect = 0.033 Identities = 30/32 (93%) Strand = Plus / Plus Query: 525 tgctataacggatagcgctccctgttggcgcc 556 ||||||||||||||||||||| ||||||||| Sbjct: 1532 tgctataacggatagcgctcctcgttggcgcc 1563
>gb|AY389691.1| Hyacinthus orientalis HMG transcription factor mRNA, partial cds Length = 764 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaatccgacaagtccaagtc 292 ||||||||||| || ||||| ||||||||||||||||| Sbjct: 375 gaggaggaagacgatgaggagtccgacaagtccaagtc 412
>gb|AC122434.2| Mus musculus BAC clone RP24-198G2 from chromosome 8, complete sequence Length = 168940 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 ||||||||||||||||||| ||||||||| Sbjct: 79867 aggaggtagaggaggaagaagaggaggaa 79895 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 79888 aggaggaagaggaggaagaggaggagga 79915
>gb|AC158900.4| Mus musculus chromosome 5, clone RP23-168G15, complete sequence Length = 211621 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaatccgacaa 283 |||||||||||||||| || ||||||||||| ||||| Sbjct: 162407 aggaggtagaggaggaggaggaggaggaatctgacaa 162443
>gb|AC155816.3| Mus musculus BAC clone RP23-435J8 from chromosome 8, complete sequence Length = 207128 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 ||||||||||||||||||| ||||||||| Sbjct: 12801 aggaggtagaggaggaagaagaggaggaa 12829 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 12822 aggaggaagaggaggaagaggaggagga 12849
>gb|AC123994.11| Mus musculus chromosome 5, clone RP24-360P14, complete sequence Length = 148929 Score = 50.1 bits (25), Expect = 0.008 Identities = 34/37 (91%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaatccgacaa 283 |||||||||||||||| || ||||||||||| ||||| Sbjct: 94012 aggaggtagaggaggaggaggaggaggaatctgacaa 94048
>emb|Z99967.1|MAZ99967 Musa acuminata mRNA for putative high mobility group protein (clone pBAN EU134) Length = 784 Score = 50.1 bits (25), Expect = 0.008 Identities = 25/25 (100%) Strand = Plus / Plus Query: 6 cccagcgccttcttcgtcttcatgg 30 ||||||||||||||||||||||||| Sbjct: 190 cccagcgccttcttcgtcttcatgg 214
>gb|AC130281.13| Mus musculus chromosome 3, clone RP23-372I17, complete sequence Length = 216261 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| ||||||||||||||||||||| Sbjct: 121355 aggaggaagaggaggaagatgaggagga 121328 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 121329 gaggaggaagatgaggagga 121310 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 121292 aggaggaagaggaggaagaggaggagga 121265
>gb|AC128862.4| Rattus norvegicus 4 BAC CH230-419L6 (Children's Hospital Oakland Research Institute) complete sequence Length = 184149 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 ||||||||||||||||||| |||||||| Sbjct: 144769 aggaggtagaggaggaagaggaggagga 144796 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 ||||||||||||||||||| |||||||| Sbjct: 144715 aggaggtagaggaggaagaggaggagga 144742 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 144895 aggaggaagaggaggaagaggaggaggaa 144923 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 ||||||||||||| ||||| |||||||| Sbjct: 144841 aggaggtagaggaagaagaggaggagga 144868 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 ||||| ||||||||||||| |||||||| Sbjct: 144742 aggagttagaggaggaagaagaggagga 144769
>gb|AC111321.8| Rattus norvegicus 4 BAC CH230-241A9 (Children's Hospital Oakland Research Institute) complete sequence Length = 227849 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 ||||||||||||||||||| |||||||| Sbjct: 181036 aggaggtagaggaggaagaggaggagga 181009 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 ||||||||||||||||||| |||||||| Sbjct: 181009 aggaggtagaggaggaagaagaggagga 180982 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 ||||||||||||||||||| |||||||| Sbjct: 180982 aggaggtagaggaggaagaggaggagga 180955 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 180856 aggaggaagaggaggaagaggaggaggaa 180828 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 ||||||||||||| ||||| |||||||| Sbjct: 180910 aggaggtagaggaagaagaggaggagga 180883
>gb|AC160537.6| Mus musculus chromosome 8, clone RP24-95H19, complete sequence Length = 188409 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| ||||||||||||||||||||| Sbjct: 30879 aggaggaagaggaggaagatgaggagga 30906
>emb|AL512584.13| Mouse DNA sequence from clone RP23-232D1 on chromosome 2, complete sequence Length = 141386 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| ||||||||||||||||||||| Sbjct: 8388 aggaggaagaggaggaagatgaggagga 8361
>gb|AC102680.10| Mus musculus chromosome 8, clone RP24-88L18, complete sequence Length = 201260 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| ||||||||||||||||||||| Sbjct: 129898 aggaggaagaggaggaagatgaggagga 129925
>gb|AC100746.4| Mus musculus chromosome 5, clone RP24-399G21, complete sequence Length = 157682 Score = 48.1 bits (24), Expect = 0.033 Identities = 27/28 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| ||||||||||||||||||||| Sbjct: 74209 aggaggaagaggaggaagatgaggagga 74236
>ref|XM_528704.1| PREDICTED: Pan troglodytes similar to a disintegrin and metalloproteinase with thrombospondin motifs 9 isoform 1 preproprotein (LOC473333), mRNA Length = 7041 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagg 273 ||||||||||||||||||| ||||||| Sbjct: 286 aggaggtagaggaggaagaggaggagg 260
>ref|XM_516145.1| PREDICTED: Pan troglodytes similar to Nucleolin (Protein C23) (LOC460006), mRNA Length = 1659 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 1561 gatgaggacgaggatgacgacga 1583
>ref|NM_030702.2| Mus musculus SUMO/sentrin specific peptidase 3 (Senp3), mRNA Length = 2311 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 428 gaggaagaggaggaagatgaggaggaa 454
>ref|XM_879595.1| PREDICTED: Bos taurus similar to Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain-associated protein) (ETS1 associated protein 1) (EAP1), transcript variant 4 (LOC504336), mRNA Length = 2510 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 1422 gaggaagaggaggaagatgaggaggaa 1448 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| ||| |||||||||||||||||| Sbjct: 1453 aggaggaagacgaggaagatgaggaggaa 1481
>ref|XM_879563.1| PREDICTED: Bos taurus similar to Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain-associated protein) (ETS1 associated protein 1) (EAP1), transcript variant 3 (LOC504336), mRNA Length = 2594 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 1506 gaggaagaggaggaagatgaggaggaa 1532 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| ||| |||||||||||||||||| Sbjct: 1537 aggaggaagacgaggaagatgaggaggaa 1565
>ref|XM_867050.1| PREDICTED: Bos taurus similar to Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain-associated protein) (ETS1 associated protein 1) (EAP1), transcript variant 2 (LOC504336), mRNA Length = 2582 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 1494 gaggaagaggaggaagatgaggaggaa 1520 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| ||| |||||||||||||||||| Sbjct: 1525 aggaggaagacgaggaagatgaggaggaa 1553
>ref|XM_580441.2| PREDICTED: Bos taurus similar to Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain-associated protein) (ETS1 associated protein 1) (EAP1), transcript variant 1 (LOC504336), mRNA Length = 2277 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 1189 gaggaagaggaggaagatgaggaggaa 1215 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| ||| |||||||||||||||||| Sbjct: 1220 aggaggaagacgaggaagatgaggaggaa 1248
>ref|NM_182920.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 9 (ADAMTS9), mRNA Length = 7335 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagg 273 ||||||||||||||||||| ||||||| Sbjct: 318 aggaggtagaggaggaagaggaggagg 292
>ref|NM_005381.2| Homo sapiens nucleolin (NCL), mRNA Length = 2732 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 865 gatgaggacgaggatgacgacga 887
>gb|BC037014.1| Mus musculus SUMO/sentrin specific peptidase 3, mRNA (cDNA clone MGC:46759 IMAGE:5344274), complete cds Length = 2220 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 317 gaggaagaggaggaagatgaggaggaa 343
>gb|BC036770.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 9, mRNA (cDNA clone IMAGE:5760026), with apparent retained intron Length = 2912 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagg 273 ||||||||||||||||||| ||||||| Sbjct: 619 aggaggtagaggaggaagaggaggagg 593
>ref|XM_445753.1| Candida glabrata CBS138, CAGL0E01485g partial mRNA Length = 4011 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 3076 gaggaagaggaggaagatgaggaggaa 3102
>gb|AC159648.2| Mus musculus BAC clone RP23-38A15 from chromosome 12, complete sequence Length = 156190 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 249 gaggtagaggaggaagatgaggaggaa 275 ||||||||||||||||| ||||||||| Sbjct: 46266 gaggtagaggaggaagaggaggaggaa 46240
>gb|BC114741.1| Bos taurus cDNA clone MGC:138055 IMAGE:8082783, complete cds Length = 2580 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 1464 gaggaagaggaggaagatgaggaggaa 1490 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| ||| |||||||||||||||||| Sbjct: 1495 aggaggaagacgaggaagatgaggaggaa 1523
>ref|XM_500967.1| Yarrowia lipolytica CLIB122, YALI0B16280g predicted mRNA Length = 843 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 219 gctgctgccccaaagaaggccgctgcc 245 ||||||||||| ||||||||||||||| Sbjct: 679 gctgctgcccccaagaaggccgctgcc 705
>ref|XM_504953.1| Yarrowia lipolytica CLIB122, YALI0F03567g predicted mRNA Length = 510 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacgagtaa 353 |||||||| |||||||||||||||||| Sbjct: 484 gatgaggatgaggatgacgacgagtaa 510
>emb|CR380951.1| Candida glabrata strain CBS138 chromosome E complete sequence Length = 687501 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 139765 gaggaagaggaggaagatgaggaggaa 139739
>gb|AC159645.2| Mus musculus BAC clone RP23-242E11 from chromosome 12, complete sequence Length = 220771 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 249 gaggtagaggaggaagatgaggaggaa 275 ||||||||||||||||| ||||||||| Sbjct: 152173 gaggtagaggaggaagaggaggaggaa 152147
>emb|AL603707.5| Mouse DNA sequence from clone RP23-422L16 on chromosome 11 Contains the 3' end of the Sat2 gene for spermidine/spermine N1-acetyl transferase 2, a ribosomal potein S15A (Rps15a) pseudogene, a ubiquitin-like 5 (Ubl5) pseudogene, the Fxr2h gene for autosomal homolog of fragile X mental retardation gene 2, the Sox15 gene for SRY-box containing gene 15, the Mpdu1 gene for mannose-P-dolichol utilization defect 1, the Cd68 gene for CD68 antigen, the Eif4a1 gene for eukaryotic translation initiation factor 4A1, the gene for sentrin/SUMO-specific protease Smt3ip1, the Tnfsf13 and Tnfsf12 genes for tumor necrosis factor (ligand) superfamily members 13 and 12, three novel genes, a ribosomal protein L13 (Rpl13) pseudogene, the Polr2a gene for polymerase (RNA) II (DNA directed) polypeptide A, the Amac1 gene for acyl-malonyl condensing enzyme, the gene for a novel BTB/POZ domain containing C2H2 type zinc finger protein, the Chrnb1 gene for nicotinic cholinergic receptor beta polypeptide 1 (muscle), the Fgf11 gene for fibroblast growth factor 11, a novel pseudogene, the gene for the ortholog of human and rat neuroligin 2 NLGN2, the gene for a novel protein of unknown function (DUF423) family member, the Plscr3 gene for phospholipid scramblase 3, the 3' end of the Tnk1 gene for non-receptor tyrosine kinase 1 and nine CpG islands, complete sequence Length = 234182 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 59837 gaggaagaggaggaagatgaggaggaa 59811
>emb|AL596252.11| Mouse DNA sequence from clone RP23-123O10 on chromosome 11 Contains the 3' end of the Acac gene for acetyl-Coenzyme A carboxylase, complete sequence Length = 187803 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 248 ggaggtagaggaggaagatgaggagga 274 ||||| ||||||||||||||||||||| Sbjct: 122166 ggaggaagaggaggaagatgaggagga 122192
>gb|AC122178.2| Homo sapiens chromosome 3 clone RP11-340I14, complete sequence Length = 201917 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagg 273 ||||||||||||||||||| ||||||| Sbjct: 129793 aggaggtagaggaggaagaggaggagg 129819
>dbj|AK128584.1| Homo sapiens cDNA FLJ46743 fis, clone TRACH3021778, moderately similar to Nucleolin Length = 3967 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 1664 gatgaggacgaggatgacgacga 1686
>dbj|AK122805.1| Homo sapiens cDNA FLJ16383 fis, clone TLIVE2007016, highly similar to NUCLEOLIN Length = 2655 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 807 gatgaggacgaggatgacgacga 829
>dbj|AK095897.1| Homo sapiens cDNA FLJ38578 fis, clone HCHON2007674, highly similar to NUCLEOLIN Length = 2560 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 712 gatgaggacgaggatgacgacga 734
>dbj|AK091742.1| Homo sapiens cDNA FLJ34423 fis, clone HHDPC2008123, highly similar to NUCLEOLIN Length = 2637 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 786 gatgaggacgaggatgacgacga 808
>dbj|AK001314.1| Homo sapiens cDNA FLJ10452 fis, clone NT2RP1000966, highly similar to NUCLEOLIN Length = 1893 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 257 gatgaggacgaggatgacgacga 279
>dbj|AP007155.1| Aspergillus oryzae RIB40 genomic DNA, SC003 Length = 4170692 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagg 273 ||||||| ||||||||||||||||||| Sbjct: 520742 aggaggtggaggaggaagatgaggagg 520716
>gb|DQ388676.1| Acanthamoeba castellanii aspartokinase-related cluster protein mRNA, partial cds Length = 540 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 43 aggagttcaagcagaagaacccc 65 ||||||||||||||||||||||| Sbjct: 173 aggagttcaagcagaagaacccc 195
>ref|XM_686814.1| PREDICTED: Danio rerio similar to Esophageal cancer associated protein (LOC563454), mRNA Length = 2037 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 253 tagaggaggaagatgaggaggaa 275 ||||||||||||||||||||||| Sbjct: 73 tagaggaggaagatgaggaggaa 51
>ref|XM_684496.1| PREDICTED: Danio rerio similar to KIAA1476 protein (LOC561095), mRNA Length = 4113 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 301 atgacgacgatgacgatgagggtagcgatgaggacgaggatga 343 ||||||| ||||| ||||||| ||||||||||| |||||||| Sbjct: 2783 atgacgatgatgaagatgaggacagcgatgaggatgaggatga 2825
>dbj|AK088608.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430021I18 product:sentrin/SUMO-specific protease, full insert sequence Length = 2220 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 340 gaggaagaggaggaagatgaggaggaa 366
>dbj|AK045071.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length enriched library, clone:B130024I17 product:sentrin/SUMO-specific protease, full insert sequence Length = 2311 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 428 gaggaagaggaggaagatgaggaggaa 454
>gb|AC017104.8| Homo sapiens BAC clone RP11-562I5 from 2, complete sequence Length = 168880 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 69283 gatgaggacgaggatgacgacga 69261
>gb|AY008764.1| Mus musculus sentrin/SUMO-specific protease (SENP3) mRNA, complete cds Length = 2174 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 283 gaggaagaggaggaagatgaggaggaa 309
>gb|AF194031.1|AF194031 Mus musculus SMT3 isopeptidase 1 (Smt3ip) mRNA, complete cds Length = 1707 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggaggaa 275 |||| |||||||||||||||||||||| Sbjct: 232 gaggaagaggaggaagatgaggaggaa 258
>gb|AF261918.1|AF261918 Homo sapiens disintegrin metalloproteinase with thrombospondin repeats (ADAMTS9) mRNA, complete cds Length = 3674 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagg 273 ||||||||||||||||||| ||||||| Sbjct: 298 aggaggtagaggaggaagaggaggagg 272
>dbj|AK000250.1| Homo sapiens cDNA FLJ20243 fis, clone COLF6418, highly similar to NUCL_HUMAN NUCLEOLIN Length = 2312 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 549 gatgaggacgaggatgacgacga 571
>dbj|AK000221.1| Homo sapiens cDNA FLJ20214 fis, clone COLF2014, highly similar to NUCL_HUMAN NUCLEOLIN Length = 2542 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 823 gatgaggacgaggatgacgacga 845
>emb|CR974592.5| Mouse DNA sequence from clone RP23-56C15 on chromosome 12, complete sequence Length = 201549 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 248 ggaggtagaggaggaagatgaggagga 274 ||||| ||||||||||||||||||||| Sbjct: 97297 ggaggaagaggaggaagatgaggagga 97271
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacgagtaa 353 |||||||| |||||||||||||||||| Sbjct: 509553 gatgaggatgaggatgacgacgagtaa 509579 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 2429124 gaggaggaagatgaggagga 2429143
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 219 gctgctgccccaaagaaggccgctgcc 245 ||||||||||| ||||||||||||||| Sbjct: 2147082 gctgctgcccccaagaaggccgctgcc 2147056
>gb|M60858.1|HUMNUCLEO Human nucleolin gene, complete cds Length = 10942 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 327 gatgaggacgaggatgacgacga 349 ||||||||||||||||||||||| Sbjct: 4697 gatgaggacgaggatgacgacga 4719
>gb|AC130657.9| Mus musculus chromosome 1, clone RP23-307H3, complete sequence Length = 198570 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 349 agtaaagaagaagcatctttgc 370 |||||||||||||||||||||| Sbjct: 14553 agtaaagaagaagcatctttgc 14532 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 35958 aggaggaagaggaggaagaggaggagga 35931
>gb|AF527617.1| Zea mays nucleasome/chromatin assembly factor D protein NFD106 (nfd106) mRNA, complete cds Length = 625 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 4 cgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaag 53 |||||| |||||||||| ||||||||| ||| ||| | ||||||||||| Sbjct: 128 cgcccaccgccttcttcctcttcatggacgacttcaggaaggagttcaag 177
>gb|AC154047.2| Drosophila melanogaster clone BACR26B05, complete sequence Length = 162638 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 325 gcgatgaggacgaggatgacga 346 |||||||||||||||||||||| Sbjct: 122811 gcgatgaggacgaggatgacga 122790
>gb|BC083373.1| Danio rerio zgc:103426, mRNA (cDNA clone MGC:103426 IMAGE:7233563), complete cds Length = 1095 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 249 gaggtagaggaggaagatgaggagga 274 ||||||||||| |||||||||||||| Sbjct: 220 gaggtagaggatgaagatgaggagga 195
>ref|XM_582943.2| PREDICTED: Bos taurus similar to malin (LOC538814), mRNA Length = 1185 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 384 gcgggagctgctgcgcgaggcc 405 |||||||||||||||||||||| Sbjct: 36 gcgggagctgctgcgcgaggcc 57
>ref|XM_586716.2| PREDICTED: Bos taurus similar to zinc finger and BTB domain containing 9 (LOC539371), mRNA Length = 1449 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggagga 274 |||| ||||||||||||||||||||| Sbjct: 673 gaggaagaggaggaagatgaggagga 698
>gb|AC139107.3| Mus musculus BAC clone RP23-430L2 from chromosome 8, complete sequence Length = 192627 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 79180 aaggaggaagaggaggaagaggaggaggaa 79209 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 84469 aggaggaagaggaggaagaggaggagga 84496
>gb|AC100378.10| Mus musculus chromosome 10, clone RP23-130O4, complete sequence Length = 218363 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaat 276 |||||| |||||||||||| |||||||||| Sbjct: 6574 aggaggaagaggaggaagaggaggaggaat 6603
>ref|XM_715654.1| Candida albicans SC5314 hypothetical protein (CaO19_11788), mRNA Length = 360 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 348 agaggaggaagatgaggaggaa 327
>ref|XM_715653.1| Candida albicans SC5314 hypothetical protein (CaO19_11787), mRNA Length = 2307 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 207 agaggaggaagatgaggaggaa 228
>gb|AC134908.5| Mus musculus BAC clone RP23-377L13 from chromosome 17, complete sequence Length = 189458 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 71050 aaggaggaagaggaggaagaagaggaggaa 71079
>ref|XM_843253.1| PREDICTED: Canis familiaris hypothetical protein LOC606822 (LOC606822), mRNA Length = 3393 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaat 276 |||||| ||||||||||||||||| ||||| Sbjct: 1133 aggaggaagaggaggaagatgaggtggaat 1162
>ref|XM_747935.1| Aspergillus fumigatus Af293 Swr1p complex component Swc5 (Afu1g16610) partial mRNA Length = 1080 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 324 agcgatgaggacgaggatgacg 345 |||||||||||||||||||||| Sbjct: 292 agcgatgaggacgaggatgacg 313
>gb|AC129012.4| Mus musculus BAC clone RP24-545L10 from chromosome 10, complete sequence Length = 143029 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaat 276 |||||| |||||||||||| |||||||||| Sbjct: 59721 aggaggaagaggaggaagaggaggaggaat 59692
>gb|AC122853.3| Mus musculus BAC clone RP23-175F18 from 7, complete sequence Length = 199264 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 51301 agaggaggaagatgaggaggaa 51280
>gb|AC122294.2| Mus musculus BAC clone RP23-259F3 from 19, complete sequence Length = 160892 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 126748 aaggagggagaggaggaagaggaggaggaa 126719 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 126907 aaggagggagaggaggaagaggaggagga 126879
>gb|AC084389.1| Mus musculus BAC clone RP23-247A1 from 1, complete sequence Length = 206497 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 245 caaggaggtagaggaggaagatgaggagga 274 |||||||| |||||||||||||||||||| Sbjct: 61990 caaggaggaggaggaggaagatgaggagga 61961 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 245 caaggaggtagaggaggaagatgaggagga 274 |||||||| |||||||||||||||||||| Sbjct: 61843 caaggaggaggaggaggaagatgaggagga 61814 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||||||||||| Sbjct: 62154 aaggaggaggaggaggaagatgaggagga 62126 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||||||||||| Sbjct: 62025 aaggaggaggaggaggaagatgaggagga 61997 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||||||||||| Sbjct: 61878 aaggaggaggaggaggaagatgaggagga 61850 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 61752 gaggaggaagatgaggagga 61733 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 61722 gaggaggaagatgaggagga 61703
>ref|XM_721940.1| Plasmodium yoelii yoelii str. 17XNL DNA repair protein RAD54 (PY00810) partial mRNA Length = 3494 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 2924 agaggaggaagatgaggaggaa 2945 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 2937 gaggaggaagatgaggaggaa 2957
>gb|AC101735.8| Mus musculus chromosome 19, clone RP23-426K3, complete sequence Length = 197927 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 58620 aaggagggagaggaggaagaggaggaggaa 58591 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 58779 aaggagggagaggaggaagaggaggagga 58751
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence Length = 243006 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 135112 aaggaggaagaggaggaagaagaggaggaa 135141
>gb|AC161876.3| Mus musculus BAC clone RP24-388H6 from chromosome 1, complete sequence Length = 174149 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 103282 aaggaggaagaggaggaagaggaggaggaa 103311
>gb|AC154352.2| Mus musculus BAC clone RP24-545J11 from chromosome 13, complete sequence Length = 199388 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 120658 aaggaggaagaggaggaagaagaggaggaa 120687
>gb|AC096792.12| Rattus norvegicus 7 BAC CH230-8O15 (Children's Hospital Oakland Research Institute) complete sequence Length = 205454 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 37291 aaggaggaagaggaggaagaggaggaggaa 37320
>emb|AL162397.14| Human DNA sequence from clone RP11-86C4 on chromosome 9, complete sequence Length = 121963 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaat 276 |||||| |||||||||||| |||||||||| Sbjct: 115305 aggaggaagaggaggaagaagaggaggaat 115334
>gb|AC073939.6| Mus musculus strain C57BL/6J chromosome 12 clone RP23-218B2, complete sequence Length = 195281 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 134320 agaggaggaagatgaggaggaa 134299 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 26287 gaggaggaagatgaggagga 26268
>gb|AC133216.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBb0049B20, complete sequence Length = 131337 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 caagtccgtcgccgccgtcggc 92 |||||||||||||||||||||| Sbjct: 20100 caagtccgtcgccgccgtcggc 20121
>emb|CR857215.1| Pongo pygmaeus mRNA; cDNA DKFZp469K1821 (from clone DKFZp469K1821) Length = 3147 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggagga 274 |||| ||||||||||||||||||||| Sbjct: 2966 gaggaagaggaggaagatgaggagga 2991
>gb|AY956392.1| Squalus acanthias acid-sensing ion channel 1 transcript variant 2 (ACCN2) mRNA, complete cds, alternatively spliced Length = 1888 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 289 agaggaggaagatgaggaggaa 310
>ref|NM_001006040.1| Danio rerio zgc:103426 (zgc:103426), mRNA Length = 1095 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 249 gaggtagaggaggaagatgaggagga 274 ||||||||||| |||||||||||||| Sbjct: 220 gaggtagaggatgaagatgaggagga 195
>dbj|AP007161.1| Aspergillus oryzae RIB40 genomic DNA, SC012 Length = 2668010 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatga 268 |||||||||||||||||||||| Sbjct: 1119557 aggaggtagaggaggaagatga 1119536
>gb|AF440223.1|AF440223 Zea mays cultivar Ohio43 HMG type nucleosome/chromatin assembly factor D (nfd106) mRNA, complete cds Length = 655 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 4 cgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaag 53 |||||| |||||||||| ||||||||| ||| ||| | ||||||||||| Sbjct: 130 cgcccaccgccttcttcctcttcatggacgacttcaggaaggagttcaag 179
>gb|AC022919.8| Homo sapiens chromosome 18, clone RP11-46D1, complete sequence Length = 159749 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 570 tgctccttgcggtgttagggtg 591 |||||||||||||||||||||| Sbjct: 21624 tgctccttgcggtgttagggtg 21603
>gb|BC102209.1| Bos taurus similar to 1810010N17Rik protein, mRNA (cDNA clone MGC:127184 IMAGE:7944527), complete cds Length = 794 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 460 agaggaggaagatgaggaggaa 481
>gb|AC153384.4| Mus musculus 6 BAC RP23-388D3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 203979 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 250 aggtagaggaggaagatgaggaggaa 275 |||||||||||||||| ||||||||| Sbjct: 22830 aggtagaggaggaagaagaggaggaa 22855
>gb|AC151052.4| Mus musculus BAC clone RP24-72K12 from chromosome 7, complete sequence Length = 216989 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 193183 agaggaggaagatgaggaggaa 193204
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 caagtccgtcgccgccgtcggc 92 |||||||||||||||||||||| Sbjct: 26966812 caagtccgtcgccgccgtcggc 26966833 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 1815898 gaggaggaagatgaggaggaa 1815918 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaatcc 278 |||||||||||||| ||||||||| Sbjct: 25565891 gaggaggaagatgaagaggaatcc 25565914
>gb|AF488803.1| Homo sapiens a disintegrin-like and metalloprotease with thrombospondin type 1 motifs 9B (ADAMTS9) mRNA, complete cds Length = 5993 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Minus Query: 248 ggaggtagaggaggaagatgaggagg 273 |||||||||||||||||| ||||||| Sbjct: 317 ggaggtagaggaggaagaggaggagg 292
>gb|AC097483.3| Homo sapiens BAC clone RP11-146N10 from 2, complete sequence Length = 98433 Score = 44.1 bits (22), Expect = 0.52 Identities = 25/26 (96%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgagga 271 ||||||| |||||||||||||||||| Sbjct: 43602 aaggaggaagaggaggaagatgagga 43627
>gb|AC079990.2| Rattus norvegicus strain Brown Norway chromosome 4 clone RP31-327J16, complete sequence Length = 116793 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaat 276 |||||| |||||||||||| |||||||||| Sbjct: 54252 aggaggaagaggaggaagaggaggaggaat 54223
>gb|AC048380.12| Homo sapiens chromosome 18, clone RP11-426J5, complete sequence Length = 224670 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 570 tgctccttgcggtgttagggtg 591 |||||||||||||||||||||| Sbjct: 46036 tgctccttgcggtgttagggtg 46057
>ref|XM_217627.3| PREDICTED: Rattus norvegicus similar to BCL6 co-repressor-like 1 (LOC302810), mRNA Length = 5754 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 4015 agaggaggaagatgaggaggaa 4036
>dbj|AP005658.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0620D11 Length = 140245 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 caagtccgtcgccgccgtcggc 92 |||||||||||||||||||||| Sbjct: 94117 caagtccgtcgccgccgtcggc 94138
>gb|AC153862.8| Mus musculus 10 BAC RP23-353K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 223830 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 219006 agaggaggaagatgaggaggaa 218985
>dbj|AK070289.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050F01, full insert sequence Length = 2183 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 caagtccgtcgccgccgtcggc 92 |||||||||||||||||||||| Sbjct: 798 caagtccgtcgccgccgtcggc 819
>gb|AY108096.1| Zea mays PCO136722 mRNA sequence Length = 882 Score = 44.1 bits (22), Expect = 0.52 Identities = 43/50 (86%) Strand = Plus / Plus Query: 4 cgcccagcgccttcttcgtcttcatgggcgagttccgcgaggagttcaag 53 |||||| |||||||||| ||||||||| ||| ||| | ||||||||||| Sbjct: 344 cgcccaccgccttcttcctcttcatggacgacttcaggaaggagttcaag 393
>gb|AC153891.6| Mus musculus 10 BAC RP23-415J15 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 198332 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 147005 agaggaggaagatgaggaggaa 147026
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 544143 agaggaggaagatgaggaggaa 544122 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 436110 gaggaggaagatgaggagga 436091
>gb|AC004169.3|AC004169 Homo sapiens chromosome 4 clone C0236G06 map 4p16, complete sequence Length = 189805 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 152934 aaggaggaagaggaggaagaagaggaggaa 152963
>gb|AE003486.2| Drosophila melanogaster chromosome X, section 38 of 74 of the complete sequence Length = 328128 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 325 gcgatgaggacgaggatgacga 346 |||||||||||||||||||||| Sbjct: 175482 gcgatgaggacgaggatgacga 175503
>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence Length = 178509 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 349 agtaaagaagaagcatctttgc 370 |||||||||||||||||||||| Sbjct: 25016 agtaaagaagaagcatctttgc 25037 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 3611 aggaggaagaggaggaagaggaggagga 3638
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 71 caagtccgtcgccgccgtcggc 92 |||||||||||||||||||||| Sbjct: 27293865 caagtccgtcgccgccgtcggc 27293886 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 1813619 gaggaggaagatgaggaggaa 1813639 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaatcc 278 |||||||||||||| ||||||||| Sbjct: 25884561 gaggaggaagatgaagaggaatcc 25884584
>emb|AL731766.27| Mouse DNA sequence from clone RP23-78B19 on chromosome 4, complete sequence Length = 144885 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 24513 aaggaggaagaggaggaagaagaggaggaa 24542
>emb|AL954850.12| Mouse DNA sequence from clone RP23-331B22 on chromosome X, complete sequence Length = 146713 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 64552 aaggaggaagaggaggaagaggaggaggaa 64523
>gb|AC139299.3| Mus musculus BAC clone RP23-335D20 from 1, complete sequence Length = 204848 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 35691 aaggaggaagaggaggaagaggaggaggaa 35662
>gb|AC142115.3| Mus musculus BAC clone RP23-327M1 from 3, complete sequence Length = 174667 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||||||||||||| || ||||||||| Sbjct: 12215 aaggaggtagaggaggaggaggaggaggaa 12244
>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence Length = 217336 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||| |||||||||||| ||||||||| Sbjct: 13018 aaggaggaagaggaggaagaagaggaggaa 12989
>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence Length = 198621 Score = 44.1 bits (22), Expect = 0.52 Identities = 28/30 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggaggaa 275 ||||||||||||||||| || ||||||||| Sbjct: 13551 aaggaggtagaggaggaggaggaggaggaa 13522
>ref|NM_001034305.1| Bos taurus similar to 1810010N17Rik protein (MGC127184), mRNA Length = 794 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 460 agaggaggaagatgaggaggaa 481
>gb|AC168272.8| Mus musculus 10 BAC RP24-261C21 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 189395 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 254 agaggaggaagatgaggaggaa 275 |||||||||||||||||||||| Sbjct: 6309 agaggaggaagatgaggaggaa 6288
>gb|AC105163.12| Mus musculus chromosome 3, clone RP24-163F11, complete sequence Length = 167766 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 35986 aggaggaagaggaggaagaagaggaggaa 35958
>gb|AC115931.7| Mus musculus chromosome 5, clone RP24-535K22, complete sequence Length = 148637 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 86743 aaggagggagaggaggaagaggaggagga 86771
>gb|AC115795.11| Mus musculus chromosome 5, clone RP23-400O10, complete sequence Length = 207103 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 198933 aggaggaagaggaggaagaagaggaggaa 198905 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| ||||||||| ||||||||||| Sbjct: 197453 aggaggaagaggaggacgatgaggagga 197480
>gb|AC116758.11| Mus musculus chromosome 8, clone RP23-383A10, complete sequence Length = 190294 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| ||||||||||||||| |||||| Sbjct: 157347 aggaggaagaggaggaagatgacgaggaa 157319
>gb|AC111115.13| Mus musculus chromosome 5, clone RP23-213H20, complete sequence Length = 201694 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 4689 aggaggaagaggaggaagaggaggaggaa 4717
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 326 cgatgaggacgaggatgacga 346 ||||||||||||||||||||| Sbjct: 1382836 cgatgaggacgaggatgacga 1382816
>gb|AY739096.1| Takifugu rubripes frRHCE, frSMP1, frNPD014, and frP29 genes, complete sequence; frRUNX3 (frRUNX3) gene, complete cds; and frCLIC4, frSRRM1, frMTMR9L, frLCK, frHD, and frKCP3 genes, complete sequence Length = 271832 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 4580 gaggaggaagatgaggaggaa 4600
>ref|NM_121193.2| Arabidopsis thaliana unknown protein AT5G11550 mRNA, complete cds Length = 1238 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 263 gaggaggaagatgaggaggaa 243
>gb|AC157087.2| Mus musculus BAC clone RP23-287O24 from chromosome 9, complete sequence Length = 226149 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 140750 aggagggagaggaggaagaggaggaggaa 140778
>gb|AC116386.9| Mus musculus chromosome 15, clone RP23-37B16, complete sequence Length = 185556 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 10191 aggaggaagaggaggaagaggaggaggaa 10163
>gb|AC168056.3| Mus musculus BAC clone RP24-189B1 from chromosome 13, complete sequence Length = 179458 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 32298 aggaggaagaggaggaagaggaggaggaa 32270
>gb|AC164119.4| Mus musculus BAC clone RP24-288I15 from chromosome 5, complete sequence Length = 189243 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 250 aggtagaggaggaagatgaggagga 274 |||||||||||||||| |||||||| Sbjct: 107392 aggtagaggaggaagaggaggagga 107416
>gb|AC160526.13| Mus musculus chromosome 8, clone RP24-191C23, complete sequence Length = 174746 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 85608 aggaggaagaggaggaagaggaggaggaa 85580
>gb|AC107757.15| Mus musculus chromosome 15, clone RP23-207L14, complete sequence Length = 208483 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 92714 aggaggaagaggaggaagaggaggaggaa 92742
>gb|AC115011.27| Mus musculus chromosome 1, clone RP24-192A11, complete sequence Length = 173802 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 112769 aaggaggaagaggaggaagaggaggagga 112741
>gb|AY633632.1| Petaurus breviceps voucher AMSM15128 microsatellite Pet8 sequence Length = 422 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggagga 274 ||||||||||||||||||||| Sbjct: 23 agaggaggaagatgaggagga 43
>gb|AC120878.10| Mus musculus chromosome 1, clone RP24-548K2, complete sequence Length = 232085 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 209457 aggaggaagaggaggaagaagaggaggaa 209429
>gb|AC151731.4| Mus musculus BAC clone RP23-401H13 from chromosome 9, complete sequence Length = 193536 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 131324 aggaggaagaggaggaagaagaggaggaa 131296
>gb|AC163351.2| Mus musculus BAC clone RP23-150D4 from chromosome 13, complete sequence Length = 214062 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 65881 aggaggaagaggaggaagaagaggaggaa 65909
>gb|AC127565.5| Mus musculus BAC clone RP24-292K9 from chromosome 7, complete sequence Length = 188650 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 63535 aaggaggaagaggaggaagaggaggagga 63507
>gb|AC154039.17| Mus musculus 10 BAC RP23-282M20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 210923 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 158608 aggaggaagaggaggaagaggaggaggaa 158580
>ref|NM_001030934.1| Gallus gallus acidic (leucine-rich) nuclear phosphoprotein 32 family, member B (ANP32B), mRNA Length = 2702 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 760 gaggaggaagatgaggaggaa 780
>ref|XM_518639.1| PREDICTED: Pan troglodytes MDN1, midasin homolog (LOC462886), mRNA Length = 16110 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 13630 gaggaggaagatgaggaggaa 13650
>ref|XM_527158.1| PREDICTED: Pan troglodytes similar to Olfactory receptor 2V3 (LOC471780), mRNA Length = 948 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 250 aggtagaggaggaagatgaggagga 274 ||||||| ||||||||||||||||| Sbjct: 155 aggtagatgaggaagatgaggagga 131
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 135045 aggaggaagaggaggaagaggaggaggaa 135073
>gb|AC119874.12| Mus musculus chromosome 8, clone RP24-289B21, complete sequence Length = 170702 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 41414 aggaggaagaggaggaagaggaggaggaa 41442
>ref|XM_463553.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1365 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||||||||||||| || |||||||| Sbjct: 253 aaggaggtagaggaggaggaggaggagga 281
>ref|XM_478260.1| Oryza sativa (japonica cultivar-group), mRNA Length = 159 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 245 caaggaggtagaggaggaagatgaggagg 273 ||||| ||||||||| ||||||||||||| Sbjct: 73 caaggtggtagaggaagaagatgaggagg 45
>gb|AC101908.8| Mus musculus chromosome 1, clone RP24-275J1, complete sequence Length = 164826 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 146700 aggaggaagaggaggaagaggaggaggaa 146672
>gb|AC109201.12| Mus musculus chromosome 15, clone RP23-18P10, complete sequence Length = 213493 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 67724 aggaggaagaggaggaagaggaggaggaa 67696
>gb|AC114653.11| Mus musculus chromosome 5, clone RP24-158G19, complete sequence Length = 164313 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 56856 aggaggaagaggaggaagaagaggaggaa 56828
>gb|AC102756.8| Mus musculus chromosome 3, clone RP24-167K1, complete sequence Length = 175712 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 87459 aggaggaagaggaggaagaggaggaggaa 87431
>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete sequence Length = 249995 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 186207 aggaggaagaggaggaagaggaggaggaa 186179
>gb|AC109276.12| Mus musculus chromosome 1, clone RP23-461J11, complete sequence Length = 173589 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 89872 gaggaggaagatgaggaggaa 89892
>gb|AC102923.10| Mus musculus chromosome 1, clone RP24-262J2, complete sequence Length = 159541 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 31210 aggaggaagaggaggaagaagaggaggaa 31238
>gb|AC158974.8| Mus musculus chromosome 15, clone RP24-252G18, complete sequence Length = 170539 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 33919 aggaggaagaggaggaagaggaggaggaa 33947
>gb|AC158791.4| Mus musculus chromosome 1, clone RP23-247C6, complete sequence Length = 218755 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 64815 aggaggaagaggaggaagaggaggaggaa 64787
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 326 cgatgaggacgaggatgacga 346 ||||||||||||||||||||| Sbjct: 856488 cgatgaggacgaggatgacga 856508
>gb|AF026521.1| Caenorhabditis elegans histone H1.4 gene, complete cds Length = 995 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 ccaaagaaggccgctgccaag 248 ||||||||||||||||||||| Sbjct: 909 ccaaagaaggccgctgccaag 929
>gb|AF005371.1| Caenorhabditis elegans histone H1.4 mRNA, complete cds Length = 953 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 228 ccaaagaaggccgctgccaag 248 ||||||||||||||||||||| Sbjct: 723 ccaaagaaggccgctgccaag 743
>gb|AC004493.1| Homo sapiens chromosome 16, cosmid clone 373C8 (LANL), complete sequence Length = 43661 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 7623 gaggaggaagatgaggaggaa 7643
>gb|AC161375.4| Mus musculus BAC clone RP23-297A22 from chromosome 14, complete sequence Length = 211662 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 69448 aggaggaagaggaggaagaggaggaggaa 69476 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 69412 aggagggagaggaggaagaagaggagga 69439
>gb|AC107754.9| Mus musculus chromosome 7, clone RP23-231J2, complete sequence Length = 171637 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 143901 aggaggaagaggaggaagaggaggaggaa 143873 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 144164 gaggaggaagatgaggagga 144145 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 144130 aggaggaagaggaggaagaggaggagga 144103 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 144091 aggaggaagaggaggaagaggaggagga 144064 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 143983 gaggaggaagatgaggagga 143964 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 143880 aggaggaagaggaggaagaggaggagga 143853
>gb|AC164437.2| Mus musculus BAC clone RP23-105B9 from chromosome 14, complete sequence Length = 205044 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 85293 aaggaggaagaggaggaagaggaggagga 85265 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 254 agaggaggaagatgaggagga 274 ||||||||||||||||||||| Sbjct: 40792 agaggaggaagatgaggagga 40772
>gb|AC163623.5| Mus musculus BAC clone RP23-123D6 from chromosome 9, complete sequence Length = 193784 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||||||||||||| || ||||||||| Sbjct: 172627 aggaggtagaggaggaggaggaggaggaa 172599
>gb|AC159817.2| Mus musculus BAC clone RP23-228E8 from chromosome 9, complete sequence Length = 193445 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 93603 aggaggaagaggaggaagaagaggaggaa 93631
>gb|AC159810.2| Mus musculus BAC clone RP24-94A19 from chromosome 9, complete sequence Length = 168537 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 55623 aggaggaagaggaggaagaggaggaggaa 55595 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 101402 gaggaggaagatgaggagga 101383 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 101351 gaggaggaagatgaggagga 101332
>gb|AC154566.2| Mus musculus BAC clone RP23-407A17 from chromosome 17, complete sequence Length = 204306 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 159213 aaggaggaagaggaggaagaagaggagga 159185
>gb|AC158993.2| Mus musculus BAC clone RP24-427N13 from chromosome 7, complete sequence Length = 179746 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggagga 274 ||||||||||||||||||||| Sbjct: 44463 agaggaggaagatgaggagga 44483
>gb|AC138595.10| Mus musculus chromosome 1, clone RP24-286D13, complete sequence Length = 172490 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 63361 aggaggaagaggaggaagaggaggaggaa 63389
>gb|AC118472.8| Mus musculus chromosome 19, clone RP23-187N14, complete sequence Length = 222869 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 57013 aggaggaagaggaggaagaggaggaggaa 57041 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 24047 aggaggaagaggaggaagaggaggaggaa 24019
>gb|AC114651.11| Mus musculus chromosome 1, clone RP24-153E5, complete sequence Length = 176384 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 175770 aaggaggaagaggaggaagaggaggagga 175798
>gb|AC109249.17| Mus musculus chromosome 13, clone RP23-78E1, complete sequence Length = 203574 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 47811 aggaggaagaggaggaagaggaggaggaa 47839
>ref|XM_616638.2| PREDICTED: Bos taurus similar to Alpha-fetoprotein enhancer binding protein (AT motif-binding factor) (AT-binding transcription factor 1) (LOC536506), mRNA Length = 3963 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 1459 gaggaggaagatgaggaggaa 1479
>gb|AC123253.4| Rattus norvegicus 12 BAC CH230-230N7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231202 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 173594 aggaggaagaggaggaagaagaggaggaa 173622
>gb|AC108321.5| Rattus norvegicus BAC CH230-261E4 (Children's Hospital Oakland Research Institute) complete sequence Length = 196424 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggagga 274 ||||||||||||||||||||| Sbjct: 106537 agaggaggaagatgaggagga 106557 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 106553 gaggaggaagatgaggagga 106572
>gb|AC112898.5| Rattus norvegicus 2 BAC CH230-157M2 (Children's Hospital Oakland Research Institute) complete sequence Length = 213379 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 140449 aggaggaagaggaggaagaggaggaggaa 140477 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 140353 aggaggaagaggaggaagaggaggagga 140380 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 140326 aggaggaagaggaggaagaggaggagga 140353 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 140302 aggaggaagaggaggaagaggaggagga 140329 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 140278 aggaggaagaggaggaagaggaggagga 140305
>gb|AF130357.2| Mus musculus chromosome X clone CT7-148C10, complete sequence Length = 106724 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 90458 aaggaggaagaggaggaagaggaggagga 90430 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 37729 aggaggaagaggaggaagaggaggaggaa 37701
>ref|XM_879792.1| PREDICTED: Bos taurus similar to PGC-1 related co-activator, transcript variant 3 (LOC513279), mRNA Length = 1936 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 914 gaggaggaagatgaggaggaa 894 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 902 gaggaggaagatgaggagga 883
>ref|XM_879770.1| PREDICTED: Bos taurus similar to PGC-1 related co-activator, transcript variant 2 (LOC513279), mRNA Length = 1307 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 530 gaggaggaagatgaggaggaa 510 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 518 gaggaggaagatgaggagga 499
>ref|XM_590942.2| PREDICTED: Bos taurus similar to PGC-1 related co-activator, transcript variant 1 (LOC513279), mRNA Length = 5264 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 4487 gaggaggaagatgaggaggaa 4467 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 4475 gaggaggaagatgaggagga 4456
>ref|XM_368481.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00763.4) partial mRNA Length = 2661 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 254 agaggaggaagatgaggagga 274 ||||||||||||||||||||| Sbjct: 1146 agaggaggaagatgaggagga 1166
>gb|AC166334.8| Mus musculus chromosome 7, clone RP23-470P9, complete sequence Length = 171861 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 111224 aggaggaagaggaggaagaggaggaggaa 111196 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 34774 aggaggaagaggaggaagaggaggagga 34747
>ref|XM_878934.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA polymerase I, transcript variant 4 (UBTF), mRNA Length = 3212 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 gaggacgaggatgacgacgag 350 ||||||||||||||||||||| Sbjct: 2473 gaggacgaggatgacgacgag 2493
>ref|XM_601299.2| PREDICTED: Bos taurus upstream binding transcription factor, RNA polymerase I, transcript variant 1 (UBTF), mRNA Length = 2895 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 gaggacgaggatgacgacgag 350 ||||||||||||||||||||| Sbjct: 2156 gaggacgaggatgacgacgag 2176
>ref|XM_866652.1| PREDICTED: Bos taurus upstream binding transcription factor, RNA polymerase I, transcript variant 2 (UBTF), mRNA Length = 3218 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 gaggacgaggatgacgacgag 350 ||||||||||||||||||||| Sbjct: 2479 gaggacgaggatgacgacgag 2499
>gb|AC096689.5| Oryza sativa chromosome 3 BAC OSJNBa0027J18 genomic sequence, complete sequence Length = 112892 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 cgtcgccgccgtcggcaaagcggcc 101 |||||||||||||||| |||||||| Sbjct: 107766 cgtcgccgccgtcggcgaagcggcc 107742
>gb|AC103550.13| Oryza sativa chromosome 3 BAC OSJNBa0079G12 genomic sequence, complete sequence Length = 163712 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 77 cgtcgccgccgtcggcaaagcggcc 101 |||||||||||||||| |||||||| Sbjct: 29682 cgtcgccgccgtcggcgaagcggcc 29658
>gb|AC129553.10| Mus musculus chromosome 5, clone RP24-351J24, complete sequence Length = 152414 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 119933 aggaggaagaggaggaagaggaggaggaa 119961
>gb|AC124830.8| Mus musculus chromosome 17, clone RP24-165B21, complete sequence Length = 176889 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 2210 aggaggaagaggaggaagaggaggaggaa 2238
>ref|XM_461838.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G07337g) partial mRNA Length = 2313 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caatgacgacgatgacgatga 319 ||||||||||||||||||||| Sbjct: 1944 caatgacgacgatgacgatga 1964
>gb|AC084800.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-13A15, complete sequence Length = 213181 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 52630 aaggaggaagaggaggaagaggaggagga 52658
>gb|AC101844.7| Mus musculus chromosome 7, clone RP23-257M22, complete sequence Length = 197827 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 41107 aggaggaagaggaggaagaggaggaggaa 41135
>gb|AC129332.6| Mus musculus BAC clone RP23-91I19 from chromosome 9, complete sequence Length = 219117 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 135441 aggaggaagaggaggaagaagaggaggaa 135413
>ref|NM_011511.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 1, mRNA Length = 6034 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgagga 271 |||||| |||||||||||||||||| Sbjct: 3019 aggaggaagaggaggaagatgagga 3043
>gb|AC147260.3| Mus musculus BAC clone RP24-186L11 from chromosome Y, complete sequence Length = 137361 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 58840 aggaggaagaggaggaagaggaggaggaa 58812
>gb|AC148009.3| Mus musculus BAC clone RP23-227B20 from chromosome 19, complete sequence Length = 201209 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||| ||||||||||| Sbjct: 69767 aggaggaagaggaggaaaatgaggaggaa 69739
>ref|NM_021042.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 4, mRNA Length = 5976 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgagga 271 |||||| |||||||||||||||||| Sbjct: 2970 aggaggaagaggaggaagatgagga 2994
>ref|NM_021041.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 2, mRNA Length = 6210 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgagga 271 |||||| |||||||||||||||||| Sbjct: 3019 aggaggaagaggaggaagatgagga 3043
>ref|NM_021043.1| Mus musculus ATP-binding cassette, sub-family C (CFTR/MRP), member 9 (Abcc9), transcript variant 3, mRNA Length = 6081 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgagga 271 |||||| |||||||||||||||||| Sbjct: 3075 aggaggaagaggaggaagatgagga 3099
>ref|NM_198418.1| Mus musculus tudor domain containing 6 (Tdrd6), mRNA Length = 7057 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgagga 271 |||||| |||||||||||||||||| Sbjct: 1499 aggaggaagaggaggaagatgagga 1523
>gb|BC072624.1| Mus musculus CDKN1A interacting zinc finger protein 1, mRNA (cDNA clone MGC:99937 IMAGE:6825309), complete cds Length = 4740 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 gaggacgaggatgacgacgag 350 ||||||||||||||||||||| Sbjct: 3260 gaggacgaggatgacgacgag 3280
>gb|BC021438.1| Mus musculus cDNA sequence BC021438, mRNA (cDNA clone MGC:29361 IMAGE:5039543), complete cds Length = 2604 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 785 aggaggaagaggaggaagaggaggaggaa 813
>gb|BC016094.1| Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1, mRNA (cDNA clone MGC:27617 IMAGE:4504496), complete cds Length = 5244 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgagga 271 |||||| |||||||||||||||||| Sbjct: 2989 aggaggaagaggaggaagatgagga 3013
>gb|AC124211.2| Mus musculus chromosome X clone CT7-497M13 map qA7.1, complete sequence Length = 114873 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 85229 aggaggaagaggaggaagaggaggaggaa 85201
>gb|AC126125.6| Rattus norvegicus 14 BAC CH230-25F8 (Children's Hospital Oakland Research Institute) complete sequence Length = 223844 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 175352 aggaggaagaggaggaagaggaggaggaa 175380 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 175442 aggaggaagaggaggaagaggaggagga 175469
>ref|XM_876937.1| PREDICTED: Bos taurus similar to zinc finger protein 326 isoform 3, transcript variant 5 (LOC533643), mRNA Length = 2432 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 1345 aggaggaagaggaggaagaagaggaggaa 1373
>ref|XM_876750.1| PREDICTED: Bos taurus similar to zinc finger protein 326 isoform 3, transcript variant 2 (LOC533643), mRNA Length = 2720 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 1633 aggaggaagaggaggaagaagaggaggaa 1661
>ref|XM_613111.2| PREDICTED: Bos taurus similar to zinc finger protein 326 isoform 3, transcript variant 1 (LOC533643), mRNA Length = 2717 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 1630 aggaggaagaggaggaagaagaggaggaa 1658
>ref|NM_011546.1| Mus musculus zinc finger homeobox 1a (Zfhx1a), mRNA Length = 5214 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 3168 aggaggaagaggaggaagaagaggaggaa 3196
>ref|NM_023831.2| Mus musculus RIKEN cDNA 1500035H01 gene (1500035H01Rik), mRNA Length = 3339 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 301 atgacgacgatgacgatgagg 321 ||||||||||||||||||||| Sbjct: 432 atgacgacgatgacgatgagg 452
>gb|AC131728.4| Mus musculus BAC clone RP23-122G5 from chromosome 5, complete sequence Length = 211796 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 250 aggtagaggaggaagatgaggagga 274 |||||||||||||||| |||||||| Sbjct: 204115 aggtagaggaggaagaggaggagga 204091
>ref|XM_718108.1| Candida albicans SC5314 putative DEAD box ATP-dependent RNA helicase (CaO19_5991), mRNA Length = 2727 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caatgacgacgatgacgatga 319 ||||||||||||||||||||| Sbjct: 213 caatgacgacgatgacgatga 233
>ref|XM_717961.1| Candida albicans SC5314 putative DEAD box ATP-dependent RNA helicase (CaO19_13412), mRNA Length = 2727 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 299 caatgacgacgatgacgatga 319 ||||||||||||||||||||| Sbjct: 213 caatgacgacgatgacgatga 233
>ref|NM_133817.1| Mus musculus zinc finger protein 451 (Zfp451), mRNA Length = 3651 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 249 gaggtagaggaggaagatgaggagg 273 ||||||||||||||||| ||||||| Sbjct: 1751 gaggtagaggaggaagaggaggagg 1775
>ref|NM_028412.1| Mus musculus CDKN1A interacting zinc finger protein 1 (Ciz1), mRNA Length = 2756 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 330 gaggacgaggatgacgacgag 350 ||||||||||||||||||||| Sbjct: 2138 gaggacgaggatgacgacgag 2158
>ref|NM_008252.2| Mus musculus high mobility group box 2 (Hmgb2), mRNA Length = 1150 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| ||||||||||||||| |||||| Sbjct: 738 aggaggaagaggaggaagatgacgaggaa 766
>gb|BC016431.1| Mus musculus leprecan-like 2, mRNA (cDNA clone MGC:6579 IMAGE:3483280), complete cds Length = 2214 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 1549 aggaggaagaggaggaagaagaggaggaa 1577
>gb|BC003726.1| Mus musculus leprecan-like 2, mRNA (cDNA clone MGC:5777 IMAGE:3497610), complete cds Length = 2289 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 1649 aggaggaagaggaggaagaagaggaggaa 1677
>ref|NM_010455.1| Mus musculus homeo box A7 (Hoxa7), mRNA Length = 1950 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 1819 aggaggaagaggaggaagaagaggaggaa 1847
>gb|AY463530.1| Mus musculus prolyl 3-hydroxylase 3 (P3h3) mRNA, complete cds Length = 2199 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 2063 aggaggaagaggaggaagaagaggaggaa 2091
>gb|AC117949.5| Mus musculus BAC clone RP23-197M6 from chromosome 18, complete sequence Length = 196445 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 194699 aggaggaagaggaggaagaggaggaggaa 194671
>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete sequence Length = 159954 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 22604 aggaggaagaggaggaagaggaggaggaa 22632
>gb|AC140314.2| Mus musculus BAC clone RP23-395L3 from chromosome 12, complete sequence Length = 191322 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 62506 aaggaggaagaggaggaagaggaggagga 62478
>gb|AC135962.4| Mus musculus BAC clone RP23-342H15 from chromosome 16, complete sequence Length = 202525 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 121979 aggaggaagaggaggaagaggaggaggaa 122007
>gb|AC072048.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-189E15, complete sequence Length = 208661 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 107115 aggaggaagaggaggaagaggaggaggaa 107143
>ref|XM_656838.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN4326.2), mRNA Length = 3636 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgagga 271 |||||| |||||||||||||||||| Sbjct: 2735 aggaggaagaggaggaagatgagga 2759
>ref|NM_020090.1| Rattus norvegicus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (Slc24a1), mRNA Length = 3550 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 2898 aggaggaagaggaggaagaggaggaggaa 2926
>ref|NM_144813.1| Mus musculus solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 (Slc24a1), mRNA Length = 5244 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgagga 271 |||||| |||||||||||||||||| Sbjct: 2989 aggaggaagaggaggaagatgagga 3013
>ref|NM_013534.3| Mus musculus leprecan-like 2 (Leprel2), mRNA Length = 2779 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 2063 aggaggaagaggaggaagaagaggaggaa 2091
>gb|AC157552.10| Mus musculus chromosome 7, clone RP23-89C10, complete sequence Length = 195587 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 20661 aggaggaagaggaggaagaggaggaggaa 20633
>gb|AC110387.6| Rattus norvegicus 1 BAC CH230-209H8 (Children's Hospital Oakland Research Institute) complete sequence Length = 226439 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggagga 274 |||||||| ||||||||||| |||||||| Sbjct: 135323 aaggaggtggaggaggaagaggaggagga 135351
>ref|NM_016333.2| Homo sapiens serine/arginine repetitive matrix 2 (SRRM2), mRNA Length = 9027 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 8153 gaggaggaagatgaggaggaa 8133
>ref|NM_014611.1| Homo sapiens MDN1, midasin homolog (yeast) (MDN1), mRNA Length = 17400 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 255 gaggaggaagatgaggaggaa 275 ||||||||||||||||||||| Sbjct: 14466 gaggaggaagatgaggaggaa 14486
>gb|AC137901.7| Mus musculus chromosome 6, clone RP23-81E17, complete sequence Length = 158419 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 108354 aggaggaagaggaggaagaagaggaggaa 108382
>gb|AC117740.12| Mus musculus chromosome 8, clone RP24-134P12, complete sequence Length = 186401 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggaggaa 275 |||||| |||||||||||| ||||||||| Sbjct: 26516 aggaggaagaggaggaagaggaggaggaa 26544 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 26537 aggaggaagaggaggaagaggaggagga 26564
>gb|AC091458.5| Mus musculus chromosome 12, clone RP23-68M8, complete sequence Length = 289751 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 246 aaggaggtagaggaggaagatgaggagga 274 ||||||| |||||||||||| |||||||| Sbjct: 141239 aaggaggaagaggaggaagaggaggagga 141267 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 285459 aggaggaagaggaggaagaggaggagga 285486 Score = 40.1 bits (20), Expect = 8.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 247 aggaggtagaggaggaagatgaggagga 274 |||||| |||||||||||| |||||||| Sbjct: 285399 aggaggaagaggaggaagaggaggagga 285426 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 255 gaggaggaagatgaggagga 274 |||||||||||||||||||| Sbjct: 183616 gaggaggaagatgaggagga 183597
>gb|AF295017.4| Homo sapiens chromosome 8 clone RP11-532M24 map q24.13, complete sequence Length = 207084 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 248 ggaggtagaggaggaagatgaggag 272 ||||| ||||||||||||||||||| Sbjct: 158485 ggaggaagaggaggaagatgaggag 158461
>gb|AC133329.4| Homo sapiens chromosome 8 clone RP11-89P9 map q24.13, complete sequence Length = 157249 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 248 ggaggtagaggaggaagatgaggag 272 ||||| ||||||||||||||||||| Sbjct: 82913 ggaggaagaggaggaagatgaggag 82889 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,415,608 Number of Sequences: 3902068 Number of extensions: 5415608 Number of successful extensions: 179461 Number of sequences better than 10.0: 1746 Number of HSP's better than 10.0 without gapping: 1753 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 169327 Number of HSP's gapped (non-prelim): 10121 length of query: 596 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 573 effective length of database: 17,143,297,704 effective search space: 9823109584392 effective search space used: 9823109584392 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
