ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7i08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ETS6_DROME (P29776) DNA-binding protein D-ETS-6 32 1.2
2DISC1_HUMAN (Q9NRI5) Disrupted in schizophrenia 1 protein 32 1.2
3STK10_HUMAN (O94804) Serine/threonine-protein kinase 10 (EC 2.7.... 31 2.1
4SIG11_HUMAN (Q96RL6) Sialic acid-binding Ig-like lectin 11 precu... 31 2.7
5SAMD6_MOUSE (Q6GQX6) Sterile alpha motif domain-containing prote... 30 6.0
6ISPE_NOCFA (Q5YPY8) 4-diphosphocytidyl-2-C-methyl-D-erythritol k... 30 6.0
7OTP_PARLI (O76971) Homeobox protein orthopedia-related (PLOTP) 30 6.0
8EPO_MACMU (Q28513) Erythropoietin precursor 30 6.0
9HIPK3_MOUSE (Q9ERH7) Homeodomain-interacting protein kinase 3 (E... 29 7.9
10HIPK3_RAT (O88850) Homeodomain-interacting protein kinase 3 (EC ... 29 7.9
11CTPA_BARBA (Q44879) Carboxy-terminal-processing protease precurs... 29 7.9
12BRC4_DROME (Q24206) Broad-complex core-protein isoform 6 29 7.9
13EPO_MACFA (P07865) Erythropoietin precursor 29 7.9

>ETS6_DROME (P29776) DNA-binding protein D-ETS-6|
          Length = 475

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 25/77 (32%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
 Frame = +1

Query: 91  QHMPPHMMYSSPYF-----SLPAANSGDLSPAIRRYCKAEQVSGQTSALSPSRDTGLSTD 255
           QH  PH     P+F     S PA+NS  L         ++   GQ  A S S  T   T 
Sbjct: 382 QHSHPHHQLGQPHFLHPHHSSPASNSSSLGFPSSSTASSQASPGQAPA-SSSASTSNFTA 440

Query: 256 PNAAGCAEISSAPTPSS 306
           P   G A +  A T +S
Sbjct: 441 PFQGGTAGVDPARTSTS 457



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>DISC1_HUMAN (Q9NRI5) Disrupted in schizophrenia 1 protein|
          Length = 854

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 22/77 (28%), Positives = 34/77 (44%)
 Frame = +1

Query: 94  HMPPHMMYSSPYFSLPAANSGDLSPAIRRYCKAEQVSGQTSALSPSRDTGLSTDPNAAGC 273
           H  P  + S P+  L    S DL+ A R   + E+       + P   + L  DP+ AGC
Sbjct: 256 HEDPRCL-SQPFSLLATRVSADLAQAARNSSRPERDMHSLPDMDPGSSSSL--DPSLAGC 312

Query: 274 AEISSAPTPSSHNQDFL 324
               S+ +  +H+ D L
Sbjct: 313 GGDGSSGSGDAHSWDTL 329



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>STK10_HUMAN (O94804) Serine/threonine-protein kinase 10 (EC 2.7.11.1)|
           (Lymphocyte-oriented kinase)
          Length = 968

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 4/107 (3%)
 Frame = +1

Query: 10  DQVIDFNSNSAYATGGRSGSGLEVKMEQHMPPHM--MYSSPYFSLPAANSGDLSPAIRRY 183
           D+ +   S    A G  +G  + V + +  P  M            A   GDLSPA  R 
Sbjct: 385 DRSLQTTSPPVVAPGNENGLAVPVPLRKSRPVSMDARIQVAQEKQVAEQGGDLSPAANRS 444

Query: 184 CKAEQVSGQTSALSPSRDTGLSTDPNAAGCAE--ISSAPTPSSHNQD 318
            KA Q    +SAL       L  +  A G  E    +AP PS  + D
Sbjct: 445 QKASQSRPNSSALET-----LGGEKLANGSLEPPAQAAPGPSKRDSD 486



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>SIG11_HUMAN (Q96RL6) Sialic acid-binding Ig-like lectin 11 precursor|
           (Siglec-11) (Sialic acid-binding lectin 11)
          Length = 686

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = +1

Query: 184 CKAEQVSGQTSALSPSRDTGLSTDPNAAGCAEISSAPTPSSHNQDFLDHLD 336
           C A   S   +ALSP R     T P+ +  + +S  P+P  H+ D   H+D
Sbjct: 174 CPAPSFSWTGAALSPRR-----TRPSTSHFSVLSFTPSPQDHDTDLTCHVD 219



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>SAMD6_MOUSE (Q6GQX6) Sterile alpha motif domain-containing protein 6|
          Length = 883

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 8/113 (7%)
 Frame = +1

Query: 1   GDVDQVIDFNSNSAYATGGRSGSGL-EVKMEQHMPP--HMMYSSPY---FSLPAANSGDL 162
           G VD V+     S  A   +  +GL E K  Q   P      SSP     SLP++ SG  
Sbjct: 651 GSVDSVL-----SQIAAQRKKAAGLCEQKPRQQSSPVGPATSSSPPELPASLPSSGSGSS 705

Query: 163 S--PAIRRYCKAEQVSGQTSALSPSRDTGLSTDPNAAGCAEISSAPTPSSHNQ 315
           S   + ++   +++    TSA S S    L+  P+  G    SS  + SSH Q
Sbjct: 706 SGPSSSKKLDPSKRPPSGTSATSKSTSPTLTPSPSPKGHTAESSVSSSSSHRQ 758



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>ISPE_NOCFA (Q5YPY8) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC|
           2.7.1.148) (CMK)
           (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol
           kinase)
          Length = 307

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -2

Query: 311 LWDDGVGADEISAQPAALGS 252
           LWD G+G DE+SA  A LGS
Sbjct: 123 LWDMGLGRDELSALAAELGS 142



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>OTP_PARLI (O76971) Homeobox protein orthopedia-related (PLOTP)|
          Length = 364

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
 Frame = +1

Query: 85  MEQHMPPHMMYSSPYFSLPAANSGD-----LSPAIRRYCKAEQVSGQTSALSPSRDTGLS 249
           M  HM PHM    P   +P    G      L P++ R    + +  Q+   S  + TGL+
Sbjct: 221 MTTHMAPHMTTHMPSHQMPLMGGGPGSALALPPSLPRQGLGQSMQQQSVNCSMGQTTGLN 280

Query: 250 T 252
           T
Sbjct: 281 T 281



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>EPO_MACMU (Q28513) Erythropoietin precursor|
          Length = 192

 Score = 29.6 bits (65), Expect = 6.0
 Identities = 15/30 (50%), Positives = 19/30 (63%), Gaps = 6/30 (20%)
 Frame = +2

Query: 416 WLWLWLSLINYSIGL------LDLVCDARV 487
           WLWL LSL++  +GL        LVCD+RV
Sbjct: 9   WLWLLLSLVSLPLGLPVPGAPPRLVCDSRV 38



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>HIPK3_MOUSE (Q9ERH7) Homeodomain-interacting protein kinase 3 (EC 2.7.11.1)|
            (Fas-interacting serine/threonine-protein kinase) (FIST)
            (Nuclear body-associated kinase 3) (Nbak3) (Androgen
            receptor-interacting nuclear protein kinase) (ANPK)
          Length = 1192

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 202  SGQTSALSPSRDTGLSTDPNAAGCAEISSAPTPSSHNQD 318
            SGQ+S     R   +S D   +GC  +  +PT  S   D
Sbjct: 900  SGQSSPSPCKRPNSMSDDEQESGCETVDGSPTSDSSGHD 938



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>HIPK3_RAT (O88850) Homeodomain-interacting protein kinase 3 (EC 2.7.11.1)|
            (Androgen receptor-interacting nuclear protein kinase)
            (ANPK)
          Length = 1191

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 13/39 (33%), Positives = 18/39 (46%)
 Frame = +1

Query: 202  SGQTSALSPSRDTGLSTDPNAAGCAEISSAPTPSSHNQD 318
            SGQ+S     R   +S D   +GC  +  +PT  S   D
Sbjct: 899  SGQSSPSPCKRPNSMSDDEQESGCETVDGSPTSDSSGHD 937



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>CTPA_BARBA (Q44879) Carboxy-terminal-processing protease precursor (EC|
           3.4.21.102) (C-terminal-processing protease)
          Length = 434

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 19/54 (35%), Positives = 27/54 (50%)
 Frame = +1

Query: 52  GGRSGSGLEVKMEQHMPPHMMYSSPYFSLPAANSGDLSPAIRRYCKAEQVSGQT 213
           G   G G+EV ME ++   +   SP    PAA +G L+         +Q+SGQT
Sbjct: 93  GEFGGLGIEVTMENNL---IKVVSPIDDTPAAKAGVLAGDFISKIDGKQISGQT 143



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>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6|
          Length = 880

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
 Frame = +1

Query: 31  SNSAYATGGRSGSGLEVKMEQHMPPHMMYSSPYFSLPAANSGDLSPAIRR----YCKAEQ 198
           SNS+      + +  + K+EQ   PH +    + S P  NS  L     +     CK+  
Sbjct: 453 SNSSSNNNNNNSNNQQQKVEQQSSPHQLLQQQHHSTPHTNSPQLKQEQPKSGGGSCKSSD 512

Query: 199 V---SGQTSALSPSRDTGLSTDPNAAGCAEISSAPTPSSHNQD 318
           +   +G   +LS S   G+   P+A G +   S PT + H ++
Sbjct: 513 LHIAAGSERSLSRS-SQGM---PDAGGHSATPS-PTAAYHKRE 550



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>EPO_MACFA (P07865) Erythropoietin precursor|
          Length = 192

 Score = 29.3 bits (64), Expect = 7.9
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 6/30 (20%)
 Frame = +2

Query: 416 WLWLWLSLINYSIGL------LDLVCDARV 487
           WLWL LSL++  +GL        L+CD+RV
Sbjct: 9   WLWLLLSLVSLPLGLPVPGAPPRLICDSRV 38


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,369,248
Number of Sequences: 219361
Number of extensions: 1173050
Number of successful extensions: 4312
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4106
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4306
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4545742239
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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