| Clone Name | baal7h18 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | HPPD_HORVU (O48604) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13... | 96 | 2e-20 | 2 | HPPD_ARATH (P93836) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13... | 70 | 1e-12 | 3 | HPPD_DAUCA (O23920) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13... | 69 | 4e-12 | 4 | HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13... | 66 | 2e-11 |
|---|
>HPPD_HORVU (O48604) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 434 Score = 96.3 bits (238), Expect = 2e-20 Identities = 50/63 (79%), Positives = 50/63 (79%) Frame = +3 Query: 3 DRPTLXLEMIQRIGCXEKDERGEEYQXXXXXXXXXXNFSELXKSIEDYEKSLEAKQSAAV 182 DRPTL LEMIQRIGC EKDERGEEYQ NFSEL KSIEDYEKSLEAKQSAAV Sbjct: 372 DRPTLFLEMIQRIGCMEKDERGEEYQKGGCGGFGKGNFSELFKSIEDYEKSLEAKQSAAV 431 Query: 183 QGS 191 QGS Sbjct: 432 QGS 434
>HPPD_ARATH (P93836) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 445 Score = 70.1 bits (170), Expect = 1e-12 Identities = 33/56 (58%), Positives = 40/56 (71%) Frame = +3 Query: 3 DRPTLXLEMIQRIGCXEKDERGEEYQXXXXXXXXXXNFSELXKSIEDYEKSLEAKQ 170 DRPT+ +E+IQR+GC KDE G+ YQ NFSEL KSIE+YEK+LEAKQ Sbjct: 387 DRPTIFIEIIQRVGCMMKDEEGKAYQSGGCGGFGKGNFSELFKSIEEYEKTLEAKQ 442
>HPPD_DAUCA (O23920) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 442 Score = 68.6 bits (166), Expect = 4e-12 Identities = 33/56 (58%), Positives = 40/56 (71%) Frame = +3 Query: 3 DRPTLXLEMIQRIGCXEKDERGEEYQXXXXXXXXXXNFSELXKSIEDYEKSLEAKQ 170 DRPTL +E+IQR+GC KD+ G+ YQ NFSEL KSIE+YEK+LEAKQ Sbjct: 380 DRPTLFIEIIQRVGCMLKDDAGQMYQKGGCGGFGKGNFSELFKSIEEYEKTLEAKQ 435
>HPPD_SOLSC (Q9ARF9) 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27)| (4HPPD) (HPD) (HPPDase) (4-hydroxyphenylpyruvic acid oxidase) Length = 436 Score = 66.2 bits (160), Expect = 2e-11 Identities = 32/55 (58%), Positives = 38/55 (69%) Frame = +3 Query: 3 DRPTLXLEMIQRIGCXEKDERGEEYQXXXXXXXXXXNFSELXKSIEDYEKSLEAK 167 DRPTL +E+IQR+GC KDE G+ YQ NFSEL KSIE+YEK LE+K Sbjct: 374 DRPTLFIEIIQRVGCMMKDEEGKMYQKGGCGGFGKGNFSELFKSIEEYEKMLESK 428 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 27,805,613 Number of Sequences: 219361 Number of extensions: 361649 Number of successful extensions: 700 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 696 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 700 length of database: 80,573,946 effective HSP length: 70 effective length of database: 65,218,676 effective search space used: 1565248224 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)