>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  358 bits (918), Expect = 8e-99
 Identities = 175/176 (99%), Positives = 175/176 (99%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNK ENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ
Sbjct: 252 TNVQLPGMYNKRENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 311

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV
Sbjct: 312 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 371

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 530
           TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG
Sbjct: 372 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 427

>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  327 bits (838), Expect = 2e-89
 Identities = 153/176 (86%), Positives = 168/176 (95%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+
Sbjct: 249 TNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 308

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TDNV DE+VV++VDTFPGQSIDFFGALRARVYDDEVRKWVG  G+ENI KRLVNSR+GP 
Sbjct: 309 TDNVPDEAVVRLVDTFPGQSIDFFGALRARVYDDEVRKWVGEIGVENISKRLVNSREGPP 368

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 530
           TF+QPKMT+EKL+EYGHMLVQEQ+NVKRVQLAD Y+S+AALG AN DAMKTG+FYG
Sbjct: 369 TFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYG 424

>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  326 bits (835), Expect = 4e-89
 Identities = 152/176 (86%), Positives = 168/176 (95%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+
Sbjct: 252 TNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFR 311

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TDNV DE +VKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP 
Sbjct: 312 TDNVPDEDIVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSDTGVENIGKRLVNSREGPP 371

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 530
            FEQPKMT+EKL+EYG+MLV+EQ+NVKRVQLA+ Y+S+AALGDAN DAMKTGSFYG
Sbjct: 372 EFEQPKMTIEKLIEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYG 427

>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  314 bits (805), Expect = 1e-85
 Identities = 146/176 (82%), Positives = 166/176 (94%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+
Sbjct: 262 TNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFR 321

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           +DNV+ E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW+   G+++IGK+LVNS++GP 
Sbjct: 322 SDNVAKEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPP 381

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 530
           TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+S+AALGDAN DAM TG+FYG
Sbjct: 382 TFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437

>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  312 bits (800), Expect = 4e-85
 Identities = 144/175 (82%), Positives = 166/175 (94%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKE+NPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+
Sbjct: 258 TNVQLPGMYNKEDNPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 317

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TD V +E VV++VDTFPGQSIDFFGALRARVYDDEVR+WV  TG+ENI ++LVNS++GP 
Sbjct: 318 TDGVDEEHVVQLVDTFPGQSIDFFGALRARVYDDEVRRWVSETGVENIARKLVNSKEGPP 377

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 527
           TFEQPK+T+EKLLEYGHMLV EQ+NVKRVQLAD Y+++AALG+AN+DAMKTGSF+
Sbjct: 378 TFEQPKITIEKLLEYGHMLVAEQENVKRVQLADKYLNEAALGEANEDAMKTGSFF 432

>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  311 bits (797), Expect = 9e-85
 Identities = 145/176 (82%), Positives = 164/176 (93%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+
Sbjct: 262 TNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 321

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TDNV+D+ +VK+VDTFPGQSIDFFGALRARVY DEVRKWV   G++ IGK+LVNS++GP 
Sbjct: 322 TDNVADDDIVKLVDTFPGQSIDFFGALRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPP 381

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 530
           +FEQPKMT++KLL YG MLVQEQ+NVKRVQLAD YMS+AALGDAN DA+K G+FYG
Sbjct: 382 SFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYG 437

>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  311 bits (796), Expect = 1e-84
 Identities = 144/174 (82%), Positives = 164/174 (94%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+
Sbjct: 262 TNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 321

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TDNV +E +VK+VD FPGQSIDFFGALRARVYDDEVRKWV   G++ IGK+LVNS++GP 
Sbjct: 322 TDNVPEEDIVKVVDQFPGQSIDFFGALRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPP 381

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 524
           TFEQPKMT++KLL+YG+MLV+EQ+NVKRVQLAD YMS+AALGDANQDA+K G+F
Sbjct: 382 TFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435

>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  308 bits (790), Expect = 6e-84
 Identities = 147/174 (84%), Positives = 163/174 (93%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+
Sbjct: 266 TNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 325

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TDNV +E+V+KIVDTFPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP 
Sbjct: 326 TDNVPEEAVIKIVDTFPGQSIDFFGALRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPP 385

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSF 524
           TFEQPKMTVEKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG+F
Sbjct: 386 TFEQPKMTVEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTGNF 439

>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  307 bits (786), Expect = 2e-83
 Identities = 146/172 (84%), Positives = 163/172 (94%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+
Sbjct: 261 TNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 320

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TDNV +E+VVKIVD+FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG++L+NSRDGP 
Sbjct: 321 TDNVPEEAVVKIVDSFPGQSIDFFGALRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPP 380

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTG 518
           TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLA+TY+ +AALGDAN DA+ TG
Sbjct: 381 TFEQPKMTLEKLLEYGNMLVQEQENVKRVQLAETYLKEAALGDANADAINTG 432

>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  303 bits (775), Expect = 3e-82
 Identities = 145/175 (82%), Positives = 158/175 (90%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNK+EN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+
Sbjct: 266 TNVQLPGMYNKQENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFR 325

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TDNV  E VVKIVD FPGQSIDFFGALRARVYDDEVRKWV  TGIE IG +L+NS DGP 
Sbjct: 326 TDNVPAEDVVKIVDNFPGQSIDFFGALRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPP 385

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 527
           TFEQPKMT+EKLLEYG+MLVQEQ+NVKRVQLAD Y+ +AALGDAN DA+  GSF+
Sbjct: 386 TFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440

>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  299 bits (766), Expect = 4e-81
 Identities = 136/175 (77%), Positives = 163/175 (93%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKEEN RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+
Sbjct: 264 TNVQLPGMYNKEENARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFR 323

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TD V +E + K+VDTFPGQSIDFFGALRARVYDDEVRKW+   G++  GK+LVNS++GP 
Sbjct: 324 TDGVPEEDITKLVDTFPGQSIDFFGALRARVYDDEVRKWISGVGVDATGKKLVNSKEGPP 383

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 527
           TF+QPKM+++KLL+YG+MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 384 TFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438

>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  299 bits (765), Expect = 5e-81
 Identities = 142/176 (80%), Positives = 159/176 (90%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKEEN RVPI+ TGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+
Sbjct: 262 TNVQLPGMYNKEENARVPIICTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 321

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TD + DE +V +VD FPGQSIDFFGALRARVYDDEVRK+V S G+E IGKRLVNSR+GP 
Sbjct: 322 TDKIKDEDIVTLVDQFPGQSIDFFGALRARVYDDEVRKFVESLGVEKIGKRLVNSREGPP 381

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 530
            FEQP+MT EKL+EYG+MLV EQ+NVKRVQLA+TY+SQAALGDAN DA+  G+FYG
Sbjct: 382 VFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYG 437

>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  298 bits (762), Expect = 1e-80
 Identities = 139/176 (78%), Positives = 160/176 (90%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNK++N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+
Sbjct: 260 TNVQLPGMYNKQDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFK 319

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TD V  E VVK+VD FPGQSIDFFGALRARVY DEVRKWV S G++N+GK+LVNS+DGP 
Sbjct: 320 TDKVPAEHVVKLVDAFPGQSIDFFGALRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPP 379

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYG 530
            FEQP+MT++KL+EYG+MLVQEQ+NVKRVQLAD YMS AALGDAN+DA+  G+F+G
Sbjct: 380 VFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFG 435

>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  290 bits (741), Expect = 3e-78
 Identities = 132/175 (75%), Positives = 161/175 (92%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKE+N RVPI+VTGNDFSTLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+
Sbjct: 266 TNVQLPGMYNKEDNARVPIIVTGNDFSTLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFR 325

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TD V ++ +V++VD  PGQSIDFFGALRARVYDDEVRKW+   G++++GK+LVNS++GP 
Sbjct: 326 TDGVPEKDIVELVDKHPGQSIDFFGALRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPP 385

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFY 527
           TF+QPKMT++KLL Y  MLVQEQ+NVKRVQLAD Y+++AALG+AN+DA+K+GSF+
Sbjct: 386 TFDQPKMTLDKLLLYASMLVQEQENVKRVQLADQYLNEAALGNANEDAIKSGSFF 440

>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  261 bits (668), Expect = 8e-70
 Identities = 121/151 (80%), Positives = 137/151 (90%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPGMYNKEENPRVPI+VTGNDFSTLYAPLIRDGRM+KFYWAPTR+DRIG+C GIF+
Sbjct: 259 TNVQLPGMYNKEENPRVPIIVTGNDFSTLYAPLIRDGRMDKFYWAPTREDRIGICTGIFR 318

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
           TD V  E +VK+VDTFPGQSIDFFGALRARVYDDEVRKW    G+E IG+ LVNS++ P 
Sbjct: 319 TDGVPFEDIVKLVDTFPGQSIDFFGALRARVYDDEVRKWAVGVGVERIGRNLVNSKESPP 378

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQL 455
           TF+QPKMT+EKLLEYG+MLV EQ+NVKRV+L
Sbjct: 379 TFDQPKMTIEKLLEYGNMLVMEQENVKRVKL 409

>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  224 bits (571), Expect = 1e-58
 Identities = 110/161 (68%), Positives = 127/161 (78%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           TNVQLPG+Y  EE PRVPIV TGNDFSTLYAPLIRDGRMEK+YW PTR+DRIGVC GIFQ
Sbjct: 235 TNVQLPGVYKNEEIPRVPIVCTGNDFSTLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQ 294

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
            DNV    V  +VDTFPGQSIDFFGALRARVYDD VR+W+  TG++ IG++LVN+R   V
Sbjct: 295 EDNVQRREVENLVDTFPGQSIDFFGALRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KV 353

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAAL 485
              +  M +  L++YG  LV EQ+NVKRVQLAD Y+S A L
Sbjct: 354 AMPKVSMDLNVLIKYGKSLVDEQENVKRVQLADAYLSGAEL 394

>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  184 bits (466), Expect = 2e-46
 Identities = 84/155 (54%), Positives = 112/155 (72%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           T+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P RD+++G+  GIF 
Sbjct: 135 TDVQLPGSYDSTPLRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFA 194

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
            D +S   V K+VD+FP QSIDFF ALR+R+YD+++R ++   G EN+  R+VNS +GP 
Sbjct: 195 EDGLSQRDVEKLVDSFPNQSIDFFSALRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPP 254

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 467
            F++P  T+  L+E  + +V EQ  ++  QL D Y
Sbjct: 255 AFKKPDFTLSHLIESANFMVAEQKRIETSQLVDEY 289

>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  179 bits (453), Expect = 7e-45
 Identities = 83/155 (53%), Positives = 110/155 (70%)
 Frame = +3

Query: 3   TNVQLPGMYNKEENPRVPIVVTGNDFSTLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQ 182
           T+VQLPG Y+     RVPI+VTGNDFSTLYAPLIRDGRMEKFYW P RDD++G+  GIF 
Sbjct: 135 TDVQLPGSYDSNPIRRVPIIVTGNDFSTLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFA 194

Query: 183 TDNVSDESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPV 362
            D +S   + ++VDTFP QSIDFF ALR+R+YD ++R ++   G E I  R+VNS + P 
Sbjct: 195 EDGLSQREIEQLVDTFPKQSIDFFSALRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPP 254

Query: 363 TFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTY 467
            F++P  ++  L+E G++++ EQ  V   QL D Y
Sbjct: 255 EFKKPDFSLAHLIESGNLVLGEQQRVDNSQLVDEY 289

>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = +3

Query: 216 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 395
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 4/146 (2%)
 Frame = -2

Query: 527  VEGTSLHRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXLEGHGPVP 348
            VEG+  HR L  + +   AHVG     +LDI  L DE   V            +  G   
Sbjct: 671  VEGS--HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQ 728

Query: 347  RVHQPLANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE- 177
            + +  +A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E 
Sbjct: 729  KFNTAVAQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHEL 780

Query: 176  -DTLADTDTVVTGGSPVELLHTTITD 102
               L   + V+  G PV   H  + D
Sbjct: 781  WTQLGHNEPVIDAGWPVFDAHALVQD 806

>EF1A2_XENLA (P17507) Elongation factor 1-alpha, oocyte form (EF-1-alpha-O)|
           (EF-1AO) (42S p48)
          Length = 461

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
 Frame = +3

Query: 360 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 515
           VTF    +T E K +E  H  +QE         NVK + + D      A    N   M+ 
Sbjct: 278 VTFAPSNVTTEVKSVEMHHEALQEALPGDNVGFNVKNISVKDIRRGNVAGDSKNDPPMQA 337

Query: 516 GSFYG*KILHTHPPSLAA 569
           GSF    I+  HP  ++A
Sbjct: 338 GSFTAQVIILNHPGQISA 355

>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +3

Query: 213 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 392
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 393 KLLEYGHMLVQEQDNVKRV 449
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -2

Query: 299 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 174
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

>EF1A_ONCVO (P27592) Elongation factor 1-alpha (EF-1-alpha)|
          Length = 464

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 8/78 (10%)
 Frame = +3

Query: 360 VTFEQPKMTVE-KLLEYGHMLVQEQ-------DNVKRVQLADTYMSQAALGDANQDAMKT 515
           VTF    +T E K +E  H  +QE         NVK + + D      A    N  A +T
Sbjct: 278 VTFAPQNLTTEVKSVEMHHEALQEALPGDNVGFNVKNISIKDIRRGSVASDSKNDPAKET 337

Query: 516 GSFYG*KILHTHPPSLAA 569
             F    I+  HP  ++A
Sbjct: 338 KMFTAQVIIMNHPGQISA 355

>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 463 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 359
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -2

Query: 212 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 78
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAI-QQASVAKKE 584

Query: 77  IV 72
           I+
Sbjct: 585 IL 586

>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +3

Query: 297 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 404
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1)
          Length = 783

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -2

Query: 212 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 78
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 77  IV 72
           I+
Sbjct: 585 IL 586

>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -2

Query: 212 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 78
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 77  IV 72
           I+
Sbjct: 585 IL 586

>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA|
          Length = 616

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -2

Query: 335 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 183
           P+ N +D   ADP      LA LI   P      +V+G +  GVDDL DR+V +I   VG
Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199

Query: 182 LEDTLA 165
             D  A
Sbjct: 200 AADAPA 205

>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 189 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 365
           NV DE  +K VDTF  G  +D  G  + + +   +++W  S G  + G +   +      
Sbjct: 92  NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148

Query: 366 FEQPKMTVEKLLEYGHM 416
              P  T +     GHM
Sbjct: 149 ASDPSRTFKNKRMPGHM 165

>EF1A0_XENLA (P13549) Elongation factor 1-alpha, somatic form (EF-1-alpha-S)|
          Length = 462

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 24/78 (30%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
 Frame = +3

Query: 360 VTFEQPKMTVE-KLLEYGHMLVQEQD-------NVKRVQLADTYMSQAALGDANQDAMKT 515
           VTF    +T E K +E  H  + E         NVK V + D      A    N   M+ 
Sbjct: 278 VTFAPVNVTTEVKSVEMHHEALTEAVPGDNVGFNVKNVSVKDVRRGNVAGDSKNDPPMEA 337

Query: 516 GSFYG*KILHTHPPSLAA 569
           GSF    I+  HP  + A
Sbjct: 338 GSFTAQVIILNHPGQIGA 355

>PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 182 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 72
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

>PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -2

Query: 182 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 72
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 366

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +3

Query: 201 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 371
           + +V  V+T    S D   A+ ARV  D+++ ++GS  +E   ++ V+  +G + ++
Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,186,070
Number of Sequences: 219361
Number of extensions: 1727004
Number of successful extensions: 5591
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 5361
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5587
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 5216272880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)