ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7g21 |
|---|---|
| Clone Library Name | barley_pub |
>GME2_ORYSA (Q2R1V8) GDP-mannose 3,5-epimerase 2 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 2) Length = 371 Score = 262 bits (669), Expect(2) = 1e-90 Identities = 124/131 (94%), Positives = 126/131 (96%) Frame = +2 Query: 89 MALNEKYTYAELEKEPYWPFEKLRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHM 268 MALNE+YTY ELEKEPYWPFEKLRISITGAGGFIASHIA+RLK EGHYIIASDWKKNEHM Sbjct: 1 MALNEEYTYVELEKEPYWPFEKLRISITGAGGFIASHIARRLKSEGHYIIASDWKKNEHM 60 Query: 269 EEDMFCHEFHLADLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN 448 EDMFCHEFHL DLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN Sbjct: 61 TEDMFCHEFHLVDLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFN 120 Query: 449 MLEAGRINGVK 481 MLEA RINGVK Sbjct: 121 MLEAARINGVK 131 Score = 91.3 bits (225), Expect(2) = 1e-90 Identities = 42/44 (95%), Positives = 44/44 (100%) Frame = +3 Query: 480 KRFFYASSACIYPEFKQLETVVSLKEADAWPAEPQDAYGLEKLA 611 KRFFYASSACIYPEFKQL+TVVSLKE+DAWPAEPQDAYGLEKLA Sbjct: 131 KRFFYASSACIYPEFKQLDTVVSLKESDAWPAEPQDAYGLEKLA 174
>GME1_ORYSA (Q338B5) GDP-mannose 3,5-epimerase 1 (EC 5.1.3.18) (GDP-Man| 3,5-epimerase 1) (OsGME-1) Length = 378 Score = 243 bits (621), Expect(2) = 1e-84 Identities = 115/126 (91%), Positives = 118/126 (93%) Frame = +2 Query: 104 KYTYAELEKEPYWPFEKLRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMF 283 +YTYAELE+E YWP EKLRISITGAGGFI SHIA+RLK EGHYIIASDWKKNEHM EDMF Sbjct: 13 EYTYAELEREQYWPSEKLRISITGAGGFIGSHIARRLKSEGHYIIASDWKKNEHMTEDMF 72 Query: 284 CHEFHLADLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAG 463 CHEFHL DLRVMDNCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEA Sbjct: 73 CHEFHLVDLRVMDNCLKVTNGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAA 132 Query: 464 RINGVK 481 RINGVK Sbjct: 133 RINGVK 138 Score = 89.7 bits (221), Expect(2) = 1e-84 Identities = 42/44 (95%), Positives = 43/44 (97%) Frame = +3 Query: 480 KRFFYASSACIYPEFKQLETVVSLKEADAWPAEPQDAYGLEKLA 611 KRFFYASSACIYPEFKQLET VSLKE+DAWPAEPQDAYGLEKLA Sbjct: 138 KRFFYASSACIYPEFKQLETNVSLKESDAWPAEPQDAYGLEKLA 181
>GME_ARATH (Q93VR3) GDP-mannose 3,5-epimerase (EC 5.1.3.18) (GDP-Man| 3,5-epimerase) Length = 377 Score = 232 bits (591), Expect(2) = 4e-80 Identities = 108/125 (86%), Positives = 115/125 (92%) Frame = +2 Query: 107 YTYAELEKEPYWPFEKLRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMFC 286 YTY ELE+E YWP E L+ISITGAGGFIASHIA+RLK EGHY+IASDWKKNEHM EDMFC Sbjct: 12 YTYKELEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFC 71 Query: 287 HEFHLADLRVMDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGR 466 EFHL DLRVM+NCLKVT GVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNM+EA R Sbjct: 72 DEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAAR 131 Query: 467 INGVK 481 ING+K Sbjct: 132 INGIK 136 Score = 86.3 bits (212), Expect(2) = 4e-80 Identities = 42/45 (93%), Positives = 43/45 (95%), Gaps = 1/45 (2%) Frame = +3 Query: 480 KRFFYASSACIYPEFKQLETV-VSLKEADAWPAEPQDAYGLEKLA 611 KRFFYASSACIYPEFKQLET VSLKE+DAWPAEPQDAYGLEKLA Sbjct: 136 KRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAYGLEKLA 180
>CAPI_STAAU (P39858) Protein capI| Length = 334 Score = 43.1 bits (100), Expect = 6e-04 Identities = 36/123 (29%), Positives = 59/123 (47%), Gaps = 11/123 (8%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEH---MEEDMF------CHEFHLAD 307 ++I ITG GFI SH+AK+L +GHY+I D + + ++ED F+ Sbjct: 1 MKILITGTAGFIGSHLAKKLIKQGHYVIGVDSINDYYSVSLKEDRLKSIGKENFTFNKVK 60 Query: 308 LRVMDNCLKVTTG--VDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVK 481 L D+ KV + V NLAA G+ + N + +N + N+LE R ++ Sbjct: 61 LENYDDLSKVFVDEQPEVVVNLAA-QAGVRYSIENPRTYIDSNIVGFMNILECSRHFNIQ 119 Query: 482 EVL 490 ++ Sbjct: 120 NLI 122
>LPSL_RHIME (O54067) UDP-glucuronate 5'-epimerase (EC 5.1.3.12) (UDP-glucuronic| acid epimerase) Length = 341 Score = 41.2 bits (95), Expect = 0.002 Identities = 36/127 (28%), Positives = 54/127 (42%), Gaps = 14/127 (11%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMFCHEFHLADLRVMDNCLK 334 +R ITG GFI H+AKRL EGH+++ D + D+ E A L+ + Sbjct: 1 MRYLITGTAGFIGFHVAKRLIDEGHFVVGFDGMTPYY---DVTLKERRHAILQRSNGFKA 57 Query: 335 VT------TGVDHVFNLA--------ADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRIN 472 VT +D LA A G+ + N + N + S+NMLE + Sbjct: 58 VTAMLEDRAALDRAAELAEPEVIIHLAAQAGVRYSLENPKAYVDANLVGSWNMLELAKAI 117 Query: 473 GVKEVLL 493 K ++L Sbjct: 118 APKHLML 124
>YBJT_ECOLI (P75822) Hypothetical protein ybjT| Length = 476 Score = 40.8 bits (94), Expect = 0.003 Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 1/121 (0%) Frame = +2 Query: 158 RISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMFCHEFHLADLRVMDNCLKV 337 RI + GA G+I H+ + L +GH I+A+ + + + H DL DN + Sbjct: 4 RILVLGASGYIGQHLVRTLSQQGHQILAAARHVDRLAKLQLANVSCHKVDLSWPDNLPAL 63 Query: 338 TTGVDHVFNLAADMG-GMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVLLCLECLHL 514 +D V+ L MG G FI V + N+ +A R VK+ L+ L L Sbjct: 64 LQDIDTVYFLVHSMGEGGDFIAQERQV--------ALNVRDALREVPVKQ-LIFLSSLQA 114 Query: 515 P 517 P Sbjct: 115 P 115
>UXS1_XENTR (Q6DF08) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 421 Score = 38.1 bits (87), Expect = 0.020 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Frame = +2 Query: 149 EKLRISITGAGGFIASHIAKRLKGEGHYIIASD--WKKNEHMEEDMFCHE-FHLADLRVM 319 ++ RI ITG GF+ SH+ +L +GH + D + + E HE F L + V+ Sbjct: 88 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 147 Query: 320 DNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVL 490 + + VD +++LA+ ++ N + NT+ + NML + G + +L Sbjct: 148 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLL 200
>UXS1_BRARE (Q6GMI9) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UXS-1) Length = 418 Score = 38.1 bits (87), Expect = 0.020 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Frame = +2 Query: 149 EKLRISITGAGGFIASHIAKRLKGEGHYIIASD--WKKNEHMEEDMFCHE-FHLADLRVM 319 ++ RI ITG GF+ SH+ +L +GH + D + + E HE F L + V+ Sbjct: 85 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 144 Query: 320 DNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVL 490 + + VD +++LA+ ++ N + NT+ + NML + G + +L Sbjct: 145 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLL 197
>UXS1_RAT (Q5PQX0) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 38.1 bits (87), Expect = 0.020 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Frame = +2 Query: 149 EKLRISITGAGGFIASHIAKRLKGEGHYIIASD--WKKNEHMEEDMFCHE-FHLADLRVM 319 ++ RI ITG GF+ SH+ +L +GH + D + + E HE F L + V+ Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146 Query: 320 DNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVL 490 + + VD +++LA+ ++ N + NT+ + NML + G + +L Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLL 199
>UXS1_PONPY (Q5R885) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 38.1 bits (87), Expect = 0.020 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Frame = +2 Query: 149 EKLRISITGAGGFIASHIAKRLKGEGHYIIASD--WKKNEHMEEDMFCHE-FHLADLRVM 319 ++ RI ITG GF+ SH+ +L +GH + D + + E HE F L + V+ Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146 Query: 320 DNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVL 490 + + VD +++LA+ ++ N + NT+ + NML + G + +L Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLL 199
>UXS1_MOUSE (Q91XL3) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 38.1 bits (87), Expect = 0.020 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Frame = +2 Query: 149 EKLRISITGAGGFIASHIAKRLKGEGHYIIASD--WKKNEHMEEDMFCHE-FHLADLRVM 319 ++ RI ITG GF+ SH+ +L +GH + D + + E HE F L + V+ Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146 Query: 320 DNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVL 490 + + VD +++LA+ ++ N + NT+ + NML + G + +L Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLL 199
>UXS1_HUMAN (Q8NBZ7) UDP-glucuronic acid decarboxylase 1 (EC 4.1.1.35)| (UDP-glucuronate decarboxylase 1) (UGD) (UXS-1) Length = 420 Score = 38.1 bits (87), Expect = 0.020 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 3/117 (2%) Frame = +2 Query: 149 EKLRISITGAGGFIASHIAKRLKGEGHYIIASD--WKKNEHMEEDMFCHE-FHLADLRVM 319 ++ RI ITG GF+ SH+ +L +GH + D + + E HE F L + V+ Sbjct: 87 DRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVV 146 Query: 320 DNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVL 490 + + VD +++LA+ ++ N + NT+ + NML + G + +L Sbjct: 147 E---PLYIEVDQIYHLASPASPPNYMY-NPIKTLKTNTIGTLNMLGLAKRVGARLLL 199
>FCL_ECOLI (P32055) GDP-L-fucose synthetase (EC 1.1.1.271)| (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 37.4 bits (85), Expect = 0.035 Identities = 26/113 (23%), Positives = 50/113 (44%) Frame = +2 Query: 152 KLRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMFCHEFHLADLRVMDNCL 331 K R+ I G G + S I ++L+ G + + ++ + H+F ++ Sbjct: 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDELNLLDSRAVHDFFASER------- 55 Query: 332 KVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVL 490 +D V+ AA +GG+ + + +Y N MI N++ A N V ++L Sbjct: 56 -----IDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLL 103
>FCL_DROME (Q9W1X8) Probable GDP-L-fucose synthetase (EC 1.1.1.271) (Protein| FX) (GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase) Length = 321 Score = 35.4 bits (80), Expect = 0.13 Identities = 18/55 (32%), Positives = 30/55 (54%) Frame = +2 Query: 353 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVLLCLECLHLP 517 HV +LAA +GG+ +N+ + NN +I+ N+L+ G +V+ CL P Sbjct: 58 HVIHLAAMVGGLFHNMNNNLDFLRNNLLINDNVLQTAHEQGCVKVVSCLSTCIFP 112
>YCL2_ECO11 (Q04871) Hypothetical 37.6 kDa protein in cld 5'region (ORF2)| Length = 334 Score = 34.3 bits (77), Expect = 0.29 Identities = 13/31 (41%), Positives = 20/31 (64%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASD 247 ++ +TGA GFI H++KRL GH ++ D Sbjct: 1 MKYLVTGAAGFIGFHVSKRLLEAGHQVVGID 31
>GALE_BACSU (P55180) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 339 Score = 33.9 bits (76), Expect = 0.38 Identities = 33/120 (27%), Positives = 48/120 (40%), Gaps = 8/120 (6%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMFCHEFHLADLRVMDNCLK 334 + I +TG G+I SH L G+ I+ D N E E DL + L Sbjct: 1 MAILVTGGAGYIGSHTCVELLNSGYEIVVLDNLSNSSAEALNRVKEITGKDLTFYEADLL 60 Query: 335 VTTGVDHVF---NLAADMGGMGFIQSNHSVIM-----YNNTMISFNMLEAGRINGVKEVL 490 VD VF + A + G SV + +NN +F + EA GVK+++ Sbjct: 61 DREAVDSVFAENEIEAVIHFAGLKAVGESVAIPLKYYHNNLTGTFILCEAMEKYGVKKIV 120
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 33.5 bits (75), Expect = 0.50 Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 10/115 (8%) Frame = +2 Query: 161 ISITGAGGFIASHIAKRL--KGEGHYIIASDW------KKNEHMEEDMFCHEFHLADLRV 316 I ITGA GFIASH+A RL + I+ D KN + + +F D+ Sbjct: 9 ILITGAAGFIASHVANRLIRSYPDYKIVVLDKLDYCSNLKNLNPSKHSPNFKFVKGDIAS 68 Query: 317 MD--NCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRING 475 D N L +T G+D + + AA + N NN + +LEA ++ G Sbjct: 69 ADLVNHLLITEGIDTIMHFAAQT-HVDNSFGNSFEFTKNNIYGTHVLLEACKVTG 122
>Y525_MYCPN (P75253) Hypothetical protein MG349 homolog (G12_orf413)| Length = 413 Score = 32.7 bits (73), Expect = 0.86 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 1/74 (1%) Frame = +2 Query: 266 MEEDMFCHEFHLADLRVMDNCLKVTTGVDHVFNLAADMGGMGF-IQSNHSVIMYNNTMIS 442 +E D C F D DN L++T + F D F ++ H ++ N +S Sbjct: 132 LEYDRNCLSFEQIDNIQFDNALEITANFEANFTSKQDCLSFSFDFEAFHKQLVKQNLFVS 191 Query: 443 FNMLEAGRINGVKE 484 FN ING E Sbjct: 192 FNQKTKAVINGYFE 205
>ARNA_PSEAE (Q9HY63) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 662 Score = 32.0 bits (71), Expect = 1.5 Identities = 25/90 (27%), Positives = 43/90 (47%), Gaps = 16/90 (17%) Frame = +2 Query: 143 PFEKLRISITGAGGFIASHIAKRLKGEGHY-----IIASD----WKKNEH---MEEDMFC 286 P + R+ I G GFI +H+++RL +G Y I SD K + H +E D+ Sbjct: 314 PQRRTRVLILGVNGFIGNHLSERLLRDGRYEVHGMDIGSDAIERLKADPHFHFVEGDIGI 373 Query: 287 H----EFHLADLRVMDNCLKVTTGVDHVFN 364 H E+H+ V+ + + T +++ N Sbjct: 374 HSEWLEYHVKKCDVILPLVAIATPIEYTRN 403
>COASY_PIG (Q8MIR4) Bifunctional coenzyme A synthase (CoA synthase) (NBP)| (POV-2) [Includes: Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase); Dephospho-CoA kinase (EC Length = 562 Score = 32.0 bits (71), Expect = 1.5 Identities = 18/40 (45%), Positives = 22/40 (55%) Frame = +2 Query: 128 KEPYWPFEKLRISITGAGGFIASHIAKRLKGEGHYIIASD 247 K P P I +TG G S +A+RLKG G Y+I SD Sbjct: 349 KRPELPPGCYVIGLTGISGSGKSSVAQRLKGLGAYVIDSD 388
>ARNA_ECOL6 (Q8FFM1) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 31.6 bits (70), Expect = 1.9 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 16/87 (18%) Frame = +2 Query: 152 KLRISITGAGGFIASHIAKRLKGEGHYII---------ASDWKKNEH---MEEDMFCH-- 289 + R+ I G GFI +H+ +RL E HY + S + + H +E D+ H Sbjct: 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFMNHPHFHFVEGDISIHSE 374 Query: 290 --EFHLADLRVMDNCLKVTTGVDHVFN 364 E+H+ V+ + + T +++ N Sbjct: 375 WIEYHVKKCDVVLPLVAIATPIEYTRN 401
>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC| 1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose synthase MUM4) Length = 667 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +2 Query: 146 FEKLRISITGAGGFIASHIAKRL 214 ++ I ITGA GFIASH+A RL Sbjct: 6 YKPKNILITGAAGFIASHVANRL 28
>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 664 Score = 31.6 bits (70), Expect = 1.9 Identities = 14/23 (60%), Positives = 17/23 (73%) Frame = +2 Query: 146 FEKLRISITGAGGFIASHIAKRL 214 ++ I ITGA GFIASH+A RL Sbjct: 4 YKPKNILITGAAGFIASHVANRL 26
>ARNA_SHIFL (Q83QT8) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 16/87 (18%) Frame = +2 Query: 152 KLRISITGAGGFIASHIAKRLKGEGHYII---------ASDWKKNEH---MEEDMFCH-- 289 + R+ I G GFI +H+ +RL E HY + S + + H +E D+ H Sbjct: 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSE 374 Query: 290 --EFHLADLRVMDNCLKVTTGVDHVFN 364 E+H+ V+ + + T +++ N Sbjct: 375 WIEYHVKKCDVVLPLVAIATPIEYTRN 401
>ARNA_ECOLI (P77398) Bifunctional polymyxin resistance arnA protein (Polymyxin| resistance protein pmrI) [Includes: UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1 Length = 660 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 16/87 (18%) Frame = +2 Query: 152 KLRISITGAGGFIASHIAKRLKGEGHYII---------ASDWKKNEH---MEEDMFCH-- 289 + R+ I G GFI +H+ +RL E HY + S + + H +E D+ H Sbjct: 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSE 374 Query: 290 --EFHLADLRVMDNCLKVTTGVDHVFN 364 E+H+ V+ + + T +++ N Sbjct: 375 WIEYHVKKCDVVLPLVAIATPIEYTRN 401
>ARNA_ECO57 (Q8XDZ3) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 31.2 bits (69), Expect = 2.5 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 16/87 (18%) Frame = +2 Query: 152 KLRISITGAGGFIASHIAKRLKGEGHYII---------ASDWKKNEH---MEEDMFCH-- 289 + R+ I G GFI +H+ +RL E HY + S + + H +E D+ H Sbjct: 315 RTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSE 374 Query: 290 --EFHLADLRVMDNCLKVTTGVDHVFN 364 E+H+ V+ + + T +++ N Sbjct: 375 WIEYHVKKCDVVLPLVAIATPIEYTRN 401
>NAHB_PSEU8 (P0A170) 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (EC| 1.3.1.60) (Cis-naphthalene dihydrodiol dehydrogenase) Length = 259 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +2 Query: 161 ISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMFCHEF 295 +SITGAG I + + K G+Y+ S +NE +E + C EF Sbjct: 7 VSITGAGSGIGLELVRSFKSAGYYV--SALVRNEE-QEALLCKEF 48
>NAHB_PSEPU (P0A169) 1,2-dihydroxy-1,2-dihydronaphthalene dehydrogenase (EC| 1.3.1.60) (Cis-naphthalene dihydrodiol dehydrogenase) Length = 259 Score = 30.8 bits (68), Expect = 3.3 Identities = 17/45 (37%), Positives = 25/45 (55%) Frame = +2 Query: 161 ISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMFCHEF 295 +SITGAG I + + K G+Y+ S +NE +E + C EF Sbjct: 7 VSITGAGSGIGLELVRSFKSAGYYV--SALVRNEE-QEALLCKEF 48
>TRI5_FUSSP (P13513) Trichodiene synthase (EC 4.2.3.6) (Sesquiterpene cyclase)| (TS) Length = 374 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +2 Query: 146 FEKLRISITGAGGFIASH----IAKRLKGEGHYIIASDWKKNEHMEEDMF 283 FE I GGF SH +R+ G GH + AS W K + E +F Sbjct: 158 FEGCWIEQYNFGGFPGSHDYPQFLRRMNGLGHCVGASLWPKEQFNERSLF 207
>Y2073_MYCBO (P65685) Hypothetical protein Mb2073c| Length = 854 Score = 30.4 bits (67), Expect = 4.2 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMFCHEFHLADLRVMDNCLK 334 +RI++TGA G + + RL +GH ++ + + +F AD+R Sbjct: 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSA---DFIAADIRDATAVES 57 Query: 335 VTTGVDHVFNLA 370 TG D V + A Sbjct: 58 AMTGADVVAHCA 69
>Y2047_MYCTU (P65684) Hypothetical protein Rv2047c/MT2107| Length = 854 Score = 30.4 bits (67), Expect = 4.2 Identities = 19/72 (26%), Positives = 32/72 (44%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHMEEDMFCHEFHLADLRVMDNCLK 334 +RI++TGA G + + RL +GH ++ + + +F AD+R Sbjct: 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSWPSSA---DFIAADIRDATAVES 57 Query: 335 VTTGVDHVFNLA 370 TG D V + A Sbjct: 58 AMTGADVVAHCA 69
>TRI5_FUSPO (Q00835) Trichodiene synthase (EC 4.2.3.6) (Sesquiterpene cyclase)| (TS) Length = 377 Score = 30.0 bits (66), Expect = 5.6 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +2 Query: 146 FEKLRISITGAGGFIASH----IAKRLKGEGHYIIASDWKKNEHMEEDMF 283 FE I GGF SH +R+ G GH + AS W K + E +F Sbjct: 158 FEGCWIEQYNFGGFPGSHDYPQFLRRMNGLGHCVGASLWPKEQFDERSLF 207
>DFRA_ANTMA (P14721) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 446 Score = 30.0 bits (66), Expect = 5.6 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 8/87 (9%) Frame = +2 Query: 143 PFEKLRISITGAGGFIASHIAKRLKGEGHYIIAS-----DWKKNEHMEEDMFCH---EFH 298 P + +TGA GFI S + RL G+ + A+ + KK +H+ E Sbjct: 14 PPSSTTVCVTGAAGFIGSWLVMRLLERGYTVRATVRDPGNMKKVKHLIELPKADTNLTLW 73 Query: 299 LADLRVMDNCLKVTTGVDHVFNLAADM 379 AD+ V + + G + VF+LA M Sbjct: 74 KADMTVEGSFDEAIQGCEGVFHLATSM 100
>GALE_ECOLI (P09147) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 30.0 bits (66), Expect = 5.6 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASD 247 +R+ +TG G+I SH +L GH +I D Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILD 31
>DFRA_ARATH (P51102) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) (TRANSPARENT TESTA 3 protein) Length = 382 Score = 30.0 bits (66), Expect = 5.6 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 8/85 (9%) Frame = +2 Query: 149 EKLRISITGAGGFIASHIAKRLKGEGHYIIAS-----DWKKNEH---MEEDMFCHEFHLA 304 +K + +TGA GFI S + RL G+++ A+ + KK +H + A Sbjct: 4 QKETVCVTGASGFIGSWLVMRLLERGYFVRATVRDPGNLKKVQHLLDLPNAKTLLTLWKA 63 Query: 305 DLRVMDNCLKVTTGVDHVFNLAADM 379 DL + G D VF++A M Sbjct: 64 DLSEEGSYDDAINGCDGVFHVATPM 88
>COASY_HUMAN (Q13057) Bifunctional coenzyme A synthase (CoA synthase) (NBP)| (POV-2) [Includes: Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase); Dephospho-CoA kinase ( Length = 564 Score = 30.0 bits (66), Expect = 5.6 Identities = 15/29 (51%), Positives = 19/29 (65%) Frame = +2 Query: 161 ISITGAGGFIASHIAKRLKGEGHYIIASD 247 I +TG G S IA+RLKG G ++I SD Sbjct: 361 IGLTGISGSGKSSIAQRLKGLGAFVIDSD 389
>GALE_STRTR (P21977) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 332 Score = 30.0 bits (66), Expect = 5.6 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 4/116 (3%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEG-HYIIASDWKKNEH---MEEDMFCHEFHLADLRVMD 322 + I + G G+I SH+ RL +G ++ D H + D ++ L+D M Sbjct: 1 MAILVLGGAGYIGSHMVDRLVEKGQEKVVVVDSLVTGHRAAVHPDAIFYQGDLSDQDFMR 60 Query: 323 NCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAGRINGVKEVL 490 K VD V + AA +G NNT +LE GVK ++ Sbjct: 61 KVFKENPDVDAVIHFAA-YSLVGESMEKPLKYFDNNTAGMVKLLEVMNECGVKYIV 115
>DFRA_CALCH (P51103) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 364 Score = 29.6 bits (65), Expect = 7.2 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 5/43 (11%) Frame = +2 Query: 161 ISITGAGGFIASHIAKRLKGEGHYIIAS-----DWKKNEHMEE 274 + +TGA GFI S + RL G+ + A+ D KK +H+ E Sbjct: 9 VCVTGAAGFIGSWLVMRLLERGYIVRATVRNPGDMKKVKHLLE 51
>ARNA_PHOLL (Q7N3Q7) Bifunctional polymyxin resistance arnA protein [Includes:| UDP-glucuronic acid decarboxylase (EC 4.1.1.-) (UDP-GlcUA decarboxylase) (ArnAFT); UDP-4-amino-4-deoxy-L-arabinose formyltransferase (EC 2.1.2.-) (UDP-L-Ara4N formyltransferase Length = 660 Score = 29.6 bits (65), Expect = 7.2 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = +2 Query: 158 RISITGAGGFIASHIAKRLKGEGHYII 238 R+ I G GFI +H+ +RL +G+Y I Sbjct: 317 RVLILGVNGFIGNHLTERLLRDGNYDI 343
>DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 366 Score = 29.6 bits (65), Expect = 7.2 Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 8/81 (9%) Frame = +2 Query: 161 ISITGAGGFIASHIAKRLKGEGHYIIAS-----DWKKNEHMEEDMFCH---EFHLADLRV 316 + +TGA GFI S + RL G+ + A+ D KK +H+ E + ADL Sbjct: 9 VCVTGAAGFIGSWLVMRLLERGYVVHATVRDPGDLKKVKHLLELPKAQTNLKLWKADLTQ 68 Query: 317 MDNCLKVTTGVDHVFNLAADM 379 + + G VF+LA M Sbjct: 69 EGSFDEAIQGCHGVFHLATPM 89
>TRI5_GIBPU (P27679) Trichodiene synthase (EC 4.2.3.6) (Sesquiterpene cyclase)| (TS) Length = 383 Score = 29.6 bits (65), Expect = 7.2 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 4/50 (8%) Frame = +2 Query: 146 FEKLRISITGAGGFIASH----IAKRLKGEGHYIIASDWKKNEHMEEDMF 283 FE I GGF SH +R+ G GH + AS W K + E +F Sbjct: 158 FEGCWIEQYNFGGFPGSHDYPQFLRRMNGLGHCVGASLWPKEQFDERGLF 207
>GALE_SALTY (P22715) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 29.6 bits (65), Expect = 7.2 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASD 247 +R+ +TG G+I SH +L GH ++ D Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILD 31
>GALE_SALTI (Q56093) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 338 Score = 29.6 bits (65), Expect = 7.2 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASD 247 +R+ +TG G+I SH +L GH ++ D Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILD 31
>HLDD_NEIMA (Q9JQX8) ADP-L-glycero-D-manno-heptose-6-epimerase (EC 5.1.3.20)| (ADP-L-glycero-beta-D-manno-heptose-6-epimerase) (ADP-glyceromanno-heptose 6-epimerase) (ADP-hep 6-epimerase) (AGME) Length = 334 Score = 29.3 bits (64), Expect = 9.5 Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 6/107 (5%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEG--HYIIASDWKKNEHMEEDMFCHEFHLAD----LRV 316 + I +TGA GFI S+I K L G + + K E + C H D +R Sbjct: 1 MTIIVTGAAGFIGSNIVKALNQRGITDIVAVDNLSKGEKFKNLAECEIAHYLDKHEFIRQ 60 Query: 317 MDNCLKVTTGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLE 457 + + ++ VF+ A M + + +M NN + ++L+ Sbjct: 61 VREHILPYQNIEAVFHQGACSDTMNY---DGLYMMDNNYQYTLDLLD 104
>GALE_BACHD (Q9KDV3) UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase)| (UDP-galactose 4-epimerase) Length = 334 Score = 29.3 bits (64), Expect = 9.5 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%) Frame = +2 Query: 155 LRISITGAGGFIASHIAKRLKGEGHYIIASDWKKNEHME--EDMFCHEFHLADLRVMDNC 328 + I +TG G+I SH L +G +I D + H D+ + + D +++D Sbjct: 1 MAILVTGGAGYIGSHTVLFLLEQGEQVIVLDNLQKGHAGALSDVTFYHGDIRDDQLLDT- 59 Query: 329 LKVTTGVDHVFNLAAD 376 + T +D V + AA+ Sbjct: 60 IFTTHSIDTVIHFAAN 75
>ALD2_SPOSA (Q9UUN9) Aldehyde reductase 2 (EC 1.1.1.2) (Aldehyde reductase II)| (ARII) Length = 342 Score = 29.3 bits (64), Expect = 9.5 Identities = 10/25 (40%), Positives = 18/25 (72%) Frame = +2 Query: 161 ISITGAGGFIASHIAKRLKGEGHYI 235 + +TGA GF+ASH+ ++L G+ + Sbjct: 14 VLVTGANGFVASHVVEQLLEHGYKV 38 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 91,535,217 Number of Sequences: 219361 Number of extensions: 1900834 Number of successful extensions: 5913 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 5678 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5912 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
