ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7f16 |
|---|---|
| Clone Library Name | barley_pub |
>E134_MAIZE (Q9ZT66) Endo-1,3;1,4-beta-D-glucanase precursor (EC 3.2.1.-)| Length = 303 Score = 176 bits (446), Expect = 5e-44 Identities = 99/199 (49%), Positives = 128/199 (64%), Gaps = 5/199 (2%) Frame = +1 Query: 1 ARATDMASPQCCANPPTLN----PAAGEGKVV-DSFGGIKAYVAGAQESKAAVVLISDVF 165 A T A QC NPP + A G+VV D GG++AYV+GA S AVVL SDVF Sbjct: 19 AATTAEAHSQCLDNPPDRSIHGRQLAEAGEVVHDLPGGLRAYVSGAASSSRAVVLASDVF 78 Query: 166 GFGAPNLRKIADKVAASGYFVVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPV 345 G+ AP LR+I DKVA +GYFVVVPDFL GD Y+ D + W++ H+ KA E+AKP+ Sbjct: 79 GYEAPLLRQIVDKVAKAGYFVVVPDFLKGD-YL--DDKKNFTEWLEAHSPVKAAEDAKPL 135 Query: 346 IAALKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAVLG 525 AALK++G SV GYCWG K+ E+ K ++++ +SHP VT DD+KEVK PI +LG Sbjct: 136 FAALKKEG-KSVAVGGYCWGGKLSVEVGKTSDVKAVCLSHPYSVTADDMKEVKWPIEILG 194 Query: 526 AETDVMSPPELVKEFEQVL 582 A+ D +PP+ V F VL Sbjct: 195 AQNDTTTPPKEVYRFVHVL 213
>YAE9_YEAST (P39721) Protein YAL049C| Length = 246 Score = 80.9 bits (198), Expect = 3e-15 Identities = 54/162 (33%), Positives = 83/162 (51%), Gaps = 8/162 (4%) Frame = +1 Query: 97 GIKAYVAGAQESKAAVVLI-SDVFGFGAPNLRKIADKVAASGYFVVVPDFLHGDPYVPED 273 G+ Y AG+ K V++I +DV+G N+ ADK A++GY V VPD L GD Sbjct: 29 GLDTYAAGSTSPKEKVIVILTDVYGNKFNNVLLTADKFASAGYMVFVPDILFGDAI---S 85 Query: 274 ADRPI--AVWIKEHTAGKAFEEAKPVIAALK-EQGASSVGAAGYCWGAKVVAELAKANE- 441 +D+PI W + H+ + + LK E +G GYC+GAK + + Sbjct: 86 SDKPIDRDAWFQRHSPEVTKKIVDGFMKLLKLEYDPKFIGVVGYCFGAKFAVQHISGDGG 145 Query: 442 -IQTAVMSHPSFVTVDDIKEV--KCPIAVLGAETDVMSPPEL 558 A ++HPSFV++++I+ + K PI + AE D + P L Sbjct: 146 LANAAAIAHPSFVSIEEIEAIDSKKPILISAAEEDHIFPANL 187
>YB4E_SCHPO (O14359) Hypothetical protein C30D10.14 in chromosome II| Length = 249 Score = 80.5 bits (197), Expect = 3e-15 Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 17/203 (8%) Frame = +1 Query: 31 CCANPPTLNPAAG-------EGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLR 189 CC PT AA +GK +++FGG+ YV G+ + ++ D+FG + ++ Sbjct: 4 CC---PTSRGAAASNKSYTFKGKEIENFGGLTTYVVGSTSNTRVLIGFMDIFGL-SDQIK 59 Query: 190 KIADKVAASGYFVVVPDFLHGDPY--------VPEDADRPIAVWIKEHTAGKAFEEAKPV 345 + ADK+A G+ V +PDFL G P PED + + + + V Sbjct: 60 EGADKLADDGFTVYLPDFLEGKPLPVTALPPKTPEDQKLCNDFFSTRISPNLHWPKLAKV 119 Query: 346 IAALKEQGASSV--GAAGYCWGAKVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPIAV 519 + A++ +V G G+CWGAKV+ + HPSF D V CP+ Sbjct: 120 VEAVRANHGPNVTIGTYGFCWGAKVLVTYPATIDFVGIASCHPSFPDSADAANVHCPVLF 179 Query: 520 LGAETDVMSPPELVKEFEQVLSS 588 L ++ + +++KE+E+ + Sbjct: 180 LCSKDE---DAKIIKEWEEAFKT 199
>DLHH_AQUAE (O67802) Putative carboxymethylenebutenolidase (EC 3.1.1.45)| (Dienelactone hydrolase) (DLH) Length = 231 Score = 43.9 bits (102), Expect = 3e-04 Identities = 37/155 (23%), Positives = 71/155 (45%), Gaps = 9/155 (5%) Frame = +1 Query: 100 IKAYVAGAQESKAAVVLISDVFGFGAP--NLRKIADKVAASGYFVVVPDFLHGDPYV--P 267 ++ Y+A + + AV++ + +G +P N+++I DK+A G+ PDF G Y P Sbjct: 14 VRGYIATPKWAGPAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQ-YADNP 72 Query: 268 EDADRPIAVWIKEH--TAGKAFEEAKPVIAALKEQGASSVGAAGYCWGAKVVAEL-AKAN 438 +DA + + ++ + F+ + + + VG G+C G + AK Sbjct: 73 DDAGKLMTEMFEKRMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFP 132 Query: 439 EIQTAVMSHPSF--VTVDDIKEVKCPIAVLGAETD 537 E+ A + +T + + +K PI + AE D Sbjct: 133 EMVDASLPFYGLPQLTQINAENIKVPIFFILAEKD 167
>DLHH_METEX (P71505) Putative carboxymethylenebutenolidase precursor (EC| 3.1.1.45) (Dienelactone hydrolase) (DLH) Length = 291 Score = 40.8 bits (94), Expect = 0.003 Identities = 28/124 (22%), Positives = 56/124 (45%), Gaps = 7/124 (5%) Frame = +1 Query: 64 AGEGKVVDSFGGIKAYVAGAQESKA--AVVLISDVFGFGAPNLRKIADKVAASGYFVVVP 237 AGE K+ G I AY A E ++++ ++FG +++ + ++A GYF + P Sbjct: 53 AGEVKIPMQDGVIPAYRAMPAEGGPFPTILVVQEIFGVHE-HIKDVCRRLAKLGYFALAP 111 Query: 238 DFL--HGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASS---VGAAGYCW 402 + GD D + ++ + + + + +A K G + +G G+CW Sbjct: 112 ELYARQGDVSTLTDIQQIVSEVVSKVPDDQVMSDLDAAVAFAKGTGKADTARLGITGFCW 171 Query: 403 GAKV 414 G ++ Sbjct: 172 GGRI 175
>MUC1_YEAST (P08640) Mucin-like protein 1 precursor| Length = 1367 Score = 35.0 bits (79), Expect = 0.16 Identities = 36/179 (20%), Positives = 60/179 (33%), Gaps = 11/179 (6%) Frame = -1 Query: 575 CSNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSXXXXXXXX 396 CS TNS G+ TS +P T + +++VT + NS Sbjct: 944 CSTG-TNSAGETTSGCSPKTVTTTVPTTTTTSVTTSSTTTITTTVCSTGTNSAGETTSGC 1002 Query: 395 XXXXXTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYP 216 T PCS + T S+ P + + T + + + Y + K G T Sbjct: 1003 SPKTITTTVPCSTSPSETASESTTTSPT--TPVTTVVSTTVVTTEYSTSTKPGGEITTTF 1060 Query: 215 DAATLSAIFLRFGAPNPKTSEMRT-----------TAALDSWAPATYALIPPKLSTTLP 72 + +L AP P + + + +S T P ++TT+P Sbjct: 1061 VTKNIPTTYLTTIAPTPSVTTVTNFTPTTITTTVCSTGTNSAGETTSGCSPKTVTTTVP 1119
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 32.7 bits (73), Expect = 0.81 Identities = 35/164 (21%), Positives = 62/164 (37%), Gaps = 3/164 (1%) Frame = -1 Query: 560 TNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSXXXXXXXXXXXXX 381 T S D +++ + S + +S +SS+ + ++ S A ++ Sbjct: 423 TGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSSSAASSSPSSSA 482 Query: 380 TLDAPCSFRAAITG---FASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDA 210 +P S ++ + ASS++ P+ + +A SASS + S S TT Sbjct: 483 ASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPSSSASSSSASSSSASSAATTAATTI 542 Query: 209 ATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTT 78 AT +A T+ TTA + AT +TT Sbjct: 543 ATTAATTTATTTATTATTTATTTATTTAATIATTTAATTTATTT 586
>THIG_METCA (Q609Z5) Thiazole biosynthesis protein thiG| Length = 270 Score = 32.3 bits (72), Expect = 1.1 Identities = 23/71 (32%), Positives = 29/71 (40%) Frame = -1 Query: 230 TTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLS 51 T KY D A A GA + RT D P+ +IPP T LP+ A + Sbjct: 30 TGKYKDLAETRAAVEMAGAEIVTVAIRRTNIGQDPGQPSLLDVIPPDRYTILPNTAGCYT 89 Query: 50 VGGFAQHCGLA 18 V + C LA Sbjct: 90 VEDAVRTCRLA 100
>VGLX_EHV1V (Q6S6W0) Glycoprotein X precursor| Length = 866 Score = 32.0 bits (71), Expect = 1.4 Identities = 43/171 (25%), Positives = 59/171 (34%) Frame = -1 Query: 572 SNSLTNSGGDITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSXXXXXXXXX 393 S S +S TS SAPSTA TS +ST T+ T S + Sbjct: 75 STSTQSSSTAATSSSAPSTASST-TSIPTSTSTET--TTTTPTASTTTPTTTTAAPTTAA 131 Query: 392 XXXXTLDAPCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPD 213 A + T A++ + P T + ++ T P S TTT Sbjct: 132 TTTAVTTAASTSAETTTATATATSTPTTT----TPTSTTTTTATTTVPTTAS-TTTDTTT 186 Query: 212 AATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYALIPPKLSTTLPSPAA 60 AAT +A T+ TT A + A T A +TT + A Sbjct: 187 AATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTAATTTA 237 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Frame = -1 Query: 284 GLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYA 105 G S SSGT S S TT P ++ +P+ +++ +TAA S AP+T + Sbjct: 39 GQSTSSGTTNS---SSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTAS 95 Query: 104 ---LIPPKLS--TTLPSPAA 60 IP S TT +P A Sbjct: 96 STTSIPTSTSTETTTTTPTA 115
>FUT1_HUMAN (P19526) Galactoside 2-alpha-L-fucosyltransferase 1 (EC 2.4.1.69)| (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Alpha(1,2)FT 1) (Fucosyltransferase 1) (Blood group H alpha 2-fucosyltransferase) Length = 365 Score = 32.0 bits (71), Expect = 1.4 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Frame = -1 Query: 314 AVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAA 135 A+ L TA+G +ASS P SGT T YP+ RFG + + + A Sbjct: 53 AIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNG--------RFGNQMGQYATLLALAQ 104 Query: 134 LDS----WAPATYALIPPKLSTTLP 72 L+ PA +A + P TLP Sbjct: 105 LNGRRAFILPAMHAALAPVFRITLP 129
>VGP3_EBVP3 (P68344) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 32.0 bits (71), Expect = 1.4 Identities = 25/94 (26%), Positives = 38/94 (40%) Frame = -1 Query: 344 TGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNP 165 TGFA+ N + S H L+A + T G + T+ P T A + P+P Sbjct: 437 TGFAAPNTTTGLPSSTHVPTNLTAPAST-GPTVSTADVTSPTPAGTTSGASPV---TPSP 492 Query: 164 KTSEMRTTAALDSWAPATYALIPPKLSTTLPSPA 63 + T + T A+ P + T P+PA Sbjct: 493 SPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
>VGP3_EBVA8 (P68343) Envelope glycoprotein GP340 (Membrane antigen) (MA)| Length = 886 Score = 32.0 bits (71), Expect = 1.4 Identities = 25/94 (26%), Positives = 38/94 (40%) Frame = -1 Query: 344 TGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNP 165 TGFA+ N + S H L+A + T G + T+ P T A + P+P Sbjct: 437 TGFAAPNTTTGLPSSTHVPTNLTAPAST-GPTVSTADVTSPTPAGTTSGASPV---TPSP 492 Query: 164 KTSEMRTTAALDSWAPATYALIPPKLSTTLPSPA 63 + T + T A+ P + T P+PA Sbjct: 493 SPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
>CLCD_PSESB (P0A115) Carboxymethylenebutenolidase (EC 3.1.1.45) (Dienelactone| hydrolase) (DLH) Length = 236 Score = 32.0 bits (71), Expect = 1.4 Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 11/140 (7%) Frame = +1 Query: 70 EGKVVDSFGG--IKAYVAGAQESKAAVVLIS-DVFGFGAPNLRKIADKVAASGYFVVVPD 240 EG + S+ G A V ++ A V++I+ ++FG A +R+ + GY V PD Sbjct: 4 EGISIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNA-FMRETVSWLVDQGYAAVCPD 62 Query: 241 FLHG-------DPYVPEDADRPIAVWIK-EHTAGKAFEEAKPVIAALKEQGASSVGAAGY 396 DP ++ +W + AG EA A + VG GY Sbjct: 63 LYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGY 122 Query: 397 CWGAKVVAELAKANEIQTAV 456 C G + +A + AV Sbjct: 123 CLGGALAFLVAAKGYVDRAV 142
>CLCD_PSEPU (P0A114) Carboxymethylenebutenolidase (EC 3.1.1.45) (Dienelactone| hydrolase) (DLH) Length = 236 Score = 32.0 bits (71), Expect = 1.4 Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 11/140 (7%) Frame = +1 Query: 70 EGKVVDSFGG--IKAYVAGAQESKAAVVLIS-DVFGFGAPNLRKIADKVAASGYFVVVPD 240 EG + S+ G A V ++ A V++I+ ++FG A +R+ + GY V PD Sbjct: 4 EGISIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNA-FMRETVSWLVDQGYAAVCPD 62 Query: 241 FLHG-------DPYVPEDADRPIAVWIK-EHTAGKAFEEAKPVIAALKEQGASSVGAAGY 396 DP ++ +W + AG EA A + VG GY Sbjct: 63 LYARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNGKVGLVGY 122 Query: 397 CWGAKVVAELAKANEIQTAV 456 C G + +A + AV Sbjct: 123 CLGGALAFLVAAKGYVDRAV 142
>FUT1_PANTR (Q9TUD6) Galactoside 2-alpha-L-fucosyltransferase 1 (EC 2.4.1.69)| (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Alpha(1,2)FT 1) (Fucosyltransferase 1) Length = 366 Score = 32.0 bits (71), Expect = 1.4 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Frame = -1 Query: 314 AVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAA 135 A+ L TA+G +ASS P SGT T YP+ RFG + + + A Sbjct: 54 AIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNG--------RFGNQMGQYATLLALAQ 105 Query: 134 LDS----WAPATYALIPPKLSTTLP 72 L+ PA +A + P TLP Sbjct: 106 LNGRRAFILPAMHAALAPVFRITLP 130
>FUT1_GORGO (Q9TUD4) Galactoside 2-alpha-L-fucosyltransferase 1 (EC 2.4.1.69)| (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Alpha(1,2)FT 1) (Fucosyltransferase 1) Length = 366 Score = 32.0 bits (71), Expect = 1.4 Identities = 27/85 (31%), Positives = 37/85 (43%), Gaps = 4/85 (4%) Frame = -1 Query: 314 AVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAA 135 A+ L TA+G +ASS P SGT T YP+ RFG + + + A Sbjct: 54 AIFCLPGTAMGPNASSSCPQHPASLSGTWTVYPNG--------RFGNQMGQYATLLALAQ 105 Query: 134 LDS----WAPATYALIPPKLSTTLP 72 L+ PA +A + P TLP Sbjct: 106 LNGRRAFILPAMHAALAPVFRITLP 130
>MURA1_STRMU (Q8DT57) UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 (EC| 2.5.1.7) (Enoylpyruvate transferase 1) (UDP-N-acetylglucosamine enolpyruvyl transferase 1) (EPT 1) Length = 423 Score = 31.6 bits (70), Expect = 1.8 Identities = 34/143 (23%), Positives = 58/143 (40%), Gaps = 3/143 (2%) Frame = +1 Query: 61 AAGEGKVVDS---FGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKIADKVAASGYFVV 231 AA E ++VD + A V GA ++ + + G + + D++ A G F+V Sbjct: 189 AAREPEIVDLANLLNKMGARVIGAGTETLTIIGVDKMHG---TDHSVVQDRIEA-GTFMV 244 Query: 232 VPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASSVGAAGYCWGAK 411 +G+ V AVW E +P+I+ L+E G G + Sbjct: 245 AAAMTNGNVLVKN------AVW----------EHNRPLISKLREMGVQVTEEER---GIR 285 Query: 412 VVAELAKANEIQTAVMSHPSFVT 480 V++++ K + M HP F T Sbjct: 286 VISDVTKLRPVTVKTMPHPGFPT 308
>FRE_SALTY (Q9L6L9) NAD(P)H-flavin reductase (EC 1.5.1.29) (EC 1.16.1.3) (FMN| reductase) (Aquacobalamin reductase) (NAD(P)H:flavin oxidoreductase) (Ferrisiderophore reductase C) Length = 232 Score = 30.8 bits (68), Expect = 3.1 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 1/82 (1%) Frame = +1 Query: 229 VVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPV-IAALKEQGASSVGAAGYCWG 405 +V D HGD ++ +D +RP+ + G F + + + AL A V WG Sbjct: 86 IVVDIPHGDAWLRDDEERPLIL----IAGGTGFSYVRSILLTALARNPARDV---TIYWG 138 Query: 406 AKVVAELAKANEIQTAVMSHPS 471 + L +E++ ++HP+ Sbjct: 139 GREEKHLYDLSELEALSVNHPN 160
>SMC5_SCHPO (O13710) Structural maintenance of chromosome 5 (DNA repair protein| spr18) (SMC partner of rad18) Length = 1065 Score = 30.0 bits (66), Expect = 5.2 Identities = 13/46 (28%), Positives = 24/46 (52%) Frame = -2 Query: 304 P*STLLLVCQRLQVHMDPHARNLAPQRNIQTQQLYRLSSSDSALQT 167 P L+ +C L++H P A+ P ++ +RL++ D L+T Sbjct: 541 PEVVLVALCHMLKIHQIPIAKRELPPASVNALNNFRLANGDPVLKT 586
>IMD_ARTGO (Q44052) Isomalto-dextranase precursor (EC 3.2.1.94) (Glucan| 1,6-alpha-isomaltosidase) (Exo-isomaltohydrolase) Length = 641 Score = 30.0 bits (66), Expect = 5.2 Identities = 17/40 (42%), Positives = 22/40 (55%) Frame = -1 Query: 155 EMRTTAALDSWAPATYALIPPKLSTTLPSPAAGLSVGGFA 36 + R TAAL A A + + PPK+ T PAA + GG A Sbjct: 474 DSRATAALAPHASAIFRVTPPKMHGTTRYPAAFAAWGGGA 513
>NXF1_DROME (Q9U1H9) Nuclear RNA export factor 1 (Protein tip-associating)| (Protein small bristles) (DmNXF1) Length = 672 Score = 30.0 bits (66), Expect = 5.2 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 3/48 (6%) Frame = +1 Query: 409 KVVAELAKANEIQTAVMSHPSFVTVDDIKEVKCPI---AVLGAETDVM 543 K+ +AK IQT + F D+K+V CP+ V+GA D+M Sbjct: 202 KMKVTMAKRYNIQTKALDLSRFHADPDLKQVFCPLFRQNVMGAAIDIM 249
>VGLX_EHV1B (P28968) Glycoprotein X precursor| Length = 797 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 5/80 (6%) Frame = -1 Query: 284 GLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDSWAPATYA 105 G S SSGT S S TT P ++ +P+ +++ +TAA S AP+T + Sbjct: 39 GQSTSSGTTNS---SSSPTTSPPTTSSSPPTSTHTSSPSSTSTQSSSTAATSSSAPSTAS 95 Query: 104 ---LIPPKLS--TTLPSPAA 60 IP S TT +P A Sbjct: 96 STTSIPTSTSTETTTTTPTA 115
>IRX3_MOUSE (P81067) Iroquois-class homeodomain protein IRX-3 (Iroquois| homeobox protein 3) (Homeodomain protein IRXB1) Length = 507 Score = 30.0 bits (66), Expect = 5.2 Identities = 26/67 (38%), Positives = 30/67 (44%), Gaps = 2/67 (2%) Frame = +1 Query: 43 PPTLNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFG--FGAPNLRKIADKVAAS 216 PP AAG G S GG AGA E AA +S+V +GAP A AA Sbjct: 16 PPERPGAAGGGGGGSSAGGRSGPGAGASE-LAASGSLSNVLSSVYGAPYAAAAAAAAAAQ 74 Query: 217 GYFVVVP 237 GY +P Sbjct: 75 GYGAFLP 81
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 29.6 bits (65), Expect = 6.8 Identities = 28/149 (18%), Positives = 62/149 (41%), Gaps = 2/149 (1%) Frame = -1 Query: 542 ITSVSAPSTAMGHFTSFISSTVTKEGCDITAVWISLAFANSXXXXXXXXXXXXXTLDAPC 363 +TS + +T+ T+ +SST T T+ + ++S + Sbjct: 169 VTSTLSSTTSSNPTTTSLSSTSTSPSSTSTSPSSTSTSSSSTSTSSSSTSTSSSSTSTSP 228 Query: 362 SFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLR 183 S + + S+++ S T+ S++S + S S +T+ P + + SA Sbjct: 229 SSTSTSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSSTSTSPSSKSTSASSTS 288 Query: 182 FGAPNPKTSEMRTTAA--LDSWAPATYAL 102 + + TS T+++ L S +P++ ++ Sbjct: 289 TSSYSTSTSPSLTSSSPTLASTSPSSTSI 317
>Y010_MYCTU (P71580) Hypothetical protein Rv0010c/MT0013| Length = 141 Score = 29.6 bits (65), Expect = 6.8 Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 1/66 (1%) Frame = -3 Query: 258 WIPMQEIWHHN-EISRRSNFIGYLPQIRRSKPEDVGDENYGGLGLLGAGDVRLDPAEAVD 82 W Q + H N +I R F Y +R + E V GGL +L D+ DP E +D Sbjct: 73 WFRTQLLRHSNIKIIRIDEFRRYGRLVRLLEIETVS----GGLLILSRWDLGTDPVEVLD 128 Query: 81 DLALAG 64 L AG Sbjct: 129 ALTAAG 134
>SMF_SYNY3 (P73345) Protein smf| Length = 398 Score = 29.6 bits (65), Expect = 6.8 Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 15/164 (9%) Frame = +1 Query: 133 KAAVVLISDVFGFGAPNLRKIADKVAASGYFVVVPDFLHGDPY--VPEDADRPIAVW--- 297 KA + + +V GFG + KI + F + + +P P+D D P +W Sbjct: 38 KARPIALGEVEGFGHKMIEKIIGQRNNLNPFQFLEEHQQKNPQFLTPDDPDYPRLLWEIP 97 Query: 298 ----IKEHTAGKAFEEAKPVIAALKEQGASSVGAAGYCWGAKVVAELAKANEIQTAVMSH 465 + + E++ I + G G W K+ L K+ + ++ Sbjct: 98 SPPPVLYYLGRLDHRESQGQIPGVGIVGTRYPTDHGSRWTRKISQALVKSGFTIVSGLA- 156 Query: 466 PSFVTVDDIKEVKC------PIAVLGAETDVMSPPELVKEFEQV 579 +D C IAVLG D++ PP+ + FEQ+ Sbjct: 157 ---AGIDADAHSSCLRVNGRTIAVLGTGLDLIYPPQNRQLFEQI 197
>GATA1_ARATH (Q8LAU9) GATA transcription factor 1 (AtGATA-1)| Length = 274 Score = 29.6 bits (65), Expect = 6.8 Identities = 27/88 (30%), Positives = 38/88 (43%), Gaps = 3/88 (3%) Frame = -1 Query: 278 SASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAALDS---WAPATY 108 ++S G+ GS + TTT T+ + + F AP S+ R T D W Sbjct: 120 NSSGGSNGSTAVATTTTTP-----TIMSCCVGFKAPAKARSKRRRTGRRDLRVLWTGNEQ 174 Query: 107 ALIPPKLSTTLPSPAAGLSVGGFAQHCG 24 I K + T+ AA L +G QHCG Sbjct: 175 GGIQKKKTMTVA--AAALIMGRKCQHCG 200
>PO121_HUMAN (Q9Y2N3) Nuclear envelope pore membrane protein POM 121 (Pore| membrane protein of 121 kDa) (P145) Length = 1229 Score = 29.6 bits (65), Expect = 6.8 Identities = 28/133 (21%), Positives = 49/133 (36%), Gaps = 11/133 (8%) Frame = -1 Query: 371 APCSFRAAITGFASSNAFPAVCSLIHTAIGLSASSGTYGSPCKK----SGTTTKYPDAAT 204 AP S + + P H+A GL A++ +G+P G+T + A Sbjct: 989 APASTIKIVPAHVPTPIQPTFGGATHSAFGLKATASAFGAPASSQPAFGGSTAVFSFGAA 1048 Query: 203 LSAIFLRFGAPNPKTSEMRTTAALDSWAPATYAL---IPP----KLSTTLPSPAAGLSVG 45 S+ FGA S +++ S P+ + P + +P + + G Sbjct: 1049 TSS---GFGATTQTASSGSSSSVFGSTTPSPFTFGGSAAPAGSGSFGINVATPGSSATTG 1105 Query: 44 GFAQHCGLAMSVA 6 F+ G + S A Sbjct: 1106 AFSFGAGQSGSTA 1118
>ILEU_HORSE (P05619) Leukocyte elastase inhibitor (LEI) (Serpin B1)| Length = 379 Score = 29.6 bits (65), Expect = 6.8 Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 13/71 (18%) Frame = +1 Query: 148 LISDVFGFGAPNLRKIADKVAASGYFVVVPDFLHGDPYV-------------PEDADRPI 288 L +D+ GAP + K+A+++ + + DFL + PEDA + I Sbjct: 73 LNADINKPGAPYILKLANRLYGEKTYNFLADFLASTQKMYGAELASVDFQQAPEDARKEI 132 Query: 289 AVWIKEHTAGK 321 W+K T GK Sbjct: 133 NEWVKGQTEGK 143
>ASSY_PHOPR (Q6LVG8) Argininosuccinate synthase (EC 6.3.4.5)| (Citrulline--aspartate ligase) Length = 404 Score = 29.3 bits (64), Expect = 8.9 Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 4/92 (4%) Frame = +1 Query: 142 VVLISDVFGFGAPNLRKIADKVAASG----YFVVVPDFLHGDPYVPEDADRPIAVWIKEH 309 V ++DV G GA L I +K ASG Y + + + D P + + A++ ++ Sbjct: 33 VAFVADV-GQGAAELEGIEEKAIASGASSCYIADLKEEMVADYIYP--SLKTGAIYEGKY 89 Query: 310 TAGKAFEEAKPVIAALKEQGASSVGAAGYCWG 405 G + A+P+IA + + A +VGA C G Sbjct: 90 LLGTSM--ARPIIAKAQVECALAVGADAVCHG 119
>LIN1_NYCCO (P08548) LINE-1 reverse transcriptase homolog| Length = 1260 Score = 29.3 bits (64), Expect = 8.9 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -3 Query: 351 SDNRLCLFKCFSRGMLLDPHCYWSVSVFRYIWIPMQEIW 235 S N+ C C +G LL HC+W + R W +++W Sbjct: 1124 SPNQRCWRGCGGKGTLL--HCWWECPLIRSFW---KDVW 1157
>FUT1_PIG (Q29043) Galactoside 2-alpha-L-fucosyltransferase 1 (EC 2.4.1.69)| (GDP-L-fucose:beta-D-galactoside 2-alpha-L-fucosyltransferase 1) (Alpha(1,2)FT 1) (Fucosyltransferase 1) Length = 365 Score = 29.3 bits (64), Expect = 8.9 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 4/85 (4%) Frame = -1 Query: 314 AVCSLIHTAIGLSASSGTYGSPCKKSGTTTKYPDAATLSAIFLRFGAPNPKTSEMRTTAA 135 A+ L T + +AS P SGT T YPD RFG + + + A Sbjct: 53 AIFCLAGTPVHPNASDSCPKHPASLSGTWTIYPDG--------RFGNQMGQYATLLALAQ 104 Query: 134 LDS----WAPATYALIPPKLSTTLP 72 L+ PA +A++ P TLP Sbjct: 105 LNGRQAFIQPAMHAVLAPVFRITLP 129
>SALA_BACSU (P50863) Protein mrp homolog salA| Length = 352 Score = 29.3 bits (64), Expect = 8.9 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 1/61 (1%) Frame = +1 Query: 40 NPPT-LNPAAGEGKVVDSFGGIKAYVAGAQESKAAVVLISDVFGFGAPNLRKIADKVAAS 216 NPP L A+G+G V S + ++ A+ K ++ +D++GF P++ I + Sbjct: 104 NPPVFLAVASGKGGVGKSTVSVNLAISLARLGKKVGLIDADIYGFSVPDMMGITVRPTIE 163 Query: 217 G 219 G Sbjct: 164 G 164
>APOA4_RAT (P02651) Apolipoprotein A-IV precursor (Apo-AIV) (ApoA-IV)| Length = 391 Score = 29.3 bits (64), Expect = 8.9 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = -2 Query: 277 QRLQVHMDPHARNLAPQRNIQTQQLYR 197 Q+LQ H+ P+A +L Q N QTQ + R Sbjct: 129 QKLQEHLRPYATDLQAQINAQTQDMKR 155
>YP183_YEAST (Q08924) WD-repeat protein YPL183C| Length = 1013 Score = 29.3 bits (64), Expect = 8.9 Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 13/88 (14%) Frame = +1 Query: 97 GIKA--YVAGAQESKAAVVLISDVFGFGAPNLR---------KIADKVAASGYFVVVPDF 243 G+K+ YVA A + A ++ D G G NL+ K +D +AA+ + Sbjct: 884 GVKSLDYVANATRTSATILTGGDDNGLGLSNLKLDDSNKVTLKTSDFIAAAASSTITSGM 943 Query: 244 L--HGDPYVPEDADRPIAVWIKEHTAGK 321 L G + D+ I W E TAGK Sbjct: 944 LINGGKEVITTSVDQVIRAW--EITAGK 969
>GALK2_PONPY (Q5R6J8) N-acetylgalactosamine kinase (EC 2.7.1.157) (GalNAc| kinase) (Galactokinase 2) Length = 458 Score = 29.3 bits (64), Expect = 8.9 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Frame = +1 Query: 226 VVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASSV-GAAGYCW 402 +V D LH +PY PE+ R + + ++E + V+ Q A V A Sbjct: 284 LVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVL 343 Query: 403 GAKVVAELAKANEIQ-TAVMSHPSFVTVDDIKEVKCP 510 K + E A N +Q + + S ++ D+ E CP Sbjct: 344 QFKKICEEAPENMVQLLGELMNQSHMSCRDMYECSCP 380
>GALK2_HUMAN (Q01415) N-acetylgalactosamine kinase (EC 2.7.1.157) (GalNAc| kinase) (Galactokinase 2) Length = 458 Score = 29.3 bits (64), Expect = 8.9 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%) Frame = +1 Query: 226 VVVPDFLHGDPYVPEDADRPIAVWIKEHTAGKAFEEAKPVIAALKEQGASSV-GAAGYCW 402 +V D LH +PY PE+ R + + ++E + V+ Q A V A Sbjct: 284 LVTEDALHPEPYNPEEICRCLGISLEELRTQILSPNTQDVLIFKLYQRAKHVYSEAARVL 343 Query: 403 GAKVVAELAKANEIQ-TAVMSHPSFVTVDDIKEVKCP 510 K + E A N +Q + + S ++ D+ E CP Sbjct: 344 QFKKICEEAPENMVQLLGELMNQSHMSCRDMYECSCP 380 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.132 0.386 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,569,660 Number of Sequences: 219361 Number of extensions: 1742276 Number of successful extensions: 6712 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 6422 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6690 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 5158951200 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)
