ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal7f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ234403.1|HVU234403 Hordeum vulgare partial mRNA; clone cMW... 168 3e-39
2ref|XM_473713.1| Oryza sativa (japonica cultivar-group), predic... 147 1e-32
3dbj|AB110206.2| Oryza sativa (japonica cultivar-group) mRNA for ... 147 1e-32
4dbj|AK070449.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 1e-32
5dbj|AK060672.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 1e-32
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 105 3e-20
7emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4,... 105 3e-20
8gb|AY111025.1| Zea mays CL13673_1 mRNA sequence 101 5e-19
9ref|NM_123894.2| Arabidopsis thaliana transcription factor AT5G4... 40 1.7
10emb|CR854945.5| Zebrafish DNA sequence from clone DKEY-155H10 in... 40 1.7
11dbj|AB188827.1| Arabidopsis thaliana SLH1 gene gene for disease ... 40 1.7
12gb|AC092836.4| Homo sapiens BAC clone RP11-50B16 from 2, complet... 40 1.7
13dbj|AB020744.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 1.7
14dbj|AK117156.1| Arabidopsis thaliana At5g45260 mRNA for putative... 40 1.7
15gb|AY105124.1| Zea mays PCO138363 mRNA sequence 40 1.7
16ref|XM_455085.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F00132g ... 38 6.6
17ref|XM_453952.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D20031g ... 38 6.6
18ref|XM_452199.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C00110g ... 38 6.6
19gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosom... 38 6.6
20gb|AC125129.5| Mus musculus BAC clone RP24-308H8 from chromosome... 38 6.6
21emb|AL512380.20| Human DNA sequence from clone RP11-204E9 on chr... 38 6.6
22emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chro... 38 6.6
23emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 38 6.6
24emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 38 6.6
25emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 38 6.6
26emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 38 6.6
27emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 38 6.6
28gb|AC127900.6| Homo sapiens 12 BAC RP11-426H7 (Roswell Park Canc... 38 6.6
29gb|AC096751.3| Homo sapiens BAC clone RP11-440I14 from 4, comple... 38 6.6
30dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 38 6.6
31gb|AC150254.5| Aedes aegypti, clone XX-88A20, complete sequence 38 6.6
32gb|AY437830.1|AY437829S2 Kluyveromyces lactis isolate P11 3' ter... 38 6.6
33gb|AY437828.1| Kluyveromyces lactis isolate P10 terminal ClaI su... 38 6.6
34gb|AY437823.1| Kluyveromyces lactis isolate P6 terminal ClaI sub... 38 6.6
35dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic D... 38 6.6
36gb|AC151971.3| Mus musculus BAC clone RP24-282C4 from 9, complet... 38 6.6
37gb|AF103320.1|AF103320 Homo sapiens clone Z127 immunoglobulin he... 38 6.6
38gb|AC103664.12| Mus musculus chromosome 7, clone RP23-348F4, com... 38 6.6
39gb|AC015535.11| Mus musculus chromosome 5, clone RP23-39M18, com... 38 6.6
40gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complet... 38 6.6 
>emb|AJ234403.1|HVU234403 Hordeum vulgare partial mRNA; clone cMWG0649
          Length = 590

 Score =  168 bits (85), Expect = 3e-39
 Identities = 103/107 (96%), Gaps = 2/107 (1%)
 Strand = Plus / Plus

                                                                       
Query: 35  gatgttgcctcgaaaataatgtctttttcacaacaaggcccacgtactacatgtataatc 94
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5   gatgttgcctcgaaaataatgtctttttcacaacaaggcccacgtactacatgtataatc 64

                                                          
Query: 95  tcagcaaacggngcgctgtncaca-gcaacactcc-gtcaaccagca 139
           ||||||||||| ||||||| |||| |||||||||| |||||||||||
Sbjct: 65  tcagcaaacggtgcgctgtgcacaggcaacactccggtcaaccagca 111
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>ref|XM_473713.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1140

 Score =  147 bits (74), Expect = 1e-32
 Identities = 122/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactcctcacataataactgngaagcctaatgaggatgttgcctcgaaaataatgtcttt 60
           |||||| ||||||||||| | ||||||||||||||||||||| || ||||||||| | ||
Sbjct: 510 tactccccacataataacagtgaagcctaatgaggatgttgcttcaaaaataatggcatt 569

                                                                       
Query: 61  ttcacaacaaggcccacgtactacatgtataatctcagcaaacggngcgctgtncacagc 120
           ||||||||||||||| || |||||||| ||||| |||||||| || || || | ||||||
Sbjct: 570 ttcacaacaaggccctcgcactacatgcataatttcagcaaatggcgctctttgcacagc 629

                              
Query: 121 aacactccgtcaaccagca 139
           |||||| ||||||||||||
Sbjct: 630 aacactacgtcaaccagca 648
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>dbj|AB110206.2| Oryza sativa (japonica cultivar-group) mRNA for hypothetical
           protein, complete cds, contig of clone: OsAHP1SE2 and
           23C4BG007
          Length = 1517

 Score =  147 bits (74), Expect = 1e-32
 Identities = 122/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactcctcacataataactgngaagcctaatgaggatgttgcctcgaaaataatgtcttt 60
           |||||| ||||||||||| | ||||||||||||||||||||| || ||||||||| | ||
Sbjct: 512 tactccccacataataacagtgaagcctaatgaggatgttgcttcaaaaataatggcatt 571

                                                                       
Query: 61  ttcacaacaaggcccacgtactacatgtataatctcagcaaacggngcgctgtncacagc 120
           ||||||||||||||| || |||||||| ||||| |||||||| || || || | ||||||
Sbjct: 572 ttcacaacaaggccctcgcactacatgcataatttcagcaaatggcgctctttgcacagc 631

                              
Query: 121 aacactccgtcaaccagca 139
           |||||| ||||||||||||
Sbjct: 632 aacactacgtcaaccagca 650
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>dbj|AK070449.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023048G11, full
           insert sequence
          Length = 1794

 Score =  147 bits (74), Expect = 1e-32
 Identities = 122/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactcctcacataataactgngaagcctaatgaggatgttgcctcgaaaataatgtcttt 60
           |||||| ||||||||||| | ||||||||||||||||||||| || ||||||||| | ||
Sbjct: 803 tactccccacataataacagtgaagcctaatgaggatgttgcttcaaaaataatggcatt 862

                                                                       
Query: 61  ttcacaacaaggcccacgtactacatgtataatctcagcaaacggngcgctgtncacagc 120
           ||||||||||||||| || |||||||| ||||| |||||||| || || || | ||||||
Sbjct: 863 ttcacaacaaggccctcgcactacatgcataatttcagcaaatggcgctctttgcacagc 922

                              
Query: 121 aacactccgtcaaccagca 139
           |||||| ||||||||||||
Sbjct: 923 aacactacgtcaaccagca 941
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>dbj|AK060672.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-G12, full
           insert sequence
          Length = 1677

 Score =  147 bits (74), Expect = 1e-32
 Identities = 122/139 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   tactcctcacataataactgngaagcctaatgaggatgttgcctcgaaaataatgtcttt 60
           |||||| ||||||||||| | ||||||||||||||||||||| || ||||||||| | ||
Sbjct: 671 tactccccacataataacagtgaagcctaatgaggatgttgcttcaaaaataatggcatt 730

                                                                       
Query: 61  ttcacaacaaggcccacgtactacatgtataatctcagcaaacggngcgctgtncacagc 120
           ||||||||||||||| || |||||||| ||||| |||||||| || || || | ||||||
Sbjct: 731 ttcacaacaaggccctcgcactacatgcataatttcagcaaatggcgctctttgcacagc 790

                              
Query: 121 aacactccgtcaaccagca 139
           |||||| ||||||||||||
Sbjct: 791 aacactacgtcaaccagca 809
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  105 bits (53), Expect = 3e-20
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                            
Query: 33       aggatgttgcctcgaaaataatgtctttttcacaacaaggcccacgtactacatgtataa 92
                |||||||||| || ||||||||| | ||||||||||||||||| || |||||||| ||||
Sbjct: 29789095 aggatgttgcttcaaaaataatggcattttcacaacaaggccctcgcactacatgcataa 29789036

                                                               
Query: 93       tctcagcaaacggngcgctgtncacagcaacactccgtcaaccagca 139
                | |||||||| || || || | |||||||||||| ||||||||||||
Sbjct: 29789035 tttcagcaaatggcgctctttgcacagcaacactacgtcaaccagca 29788989



 Score = 48.1 bits (24), Expect = 0.007
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                   
Query: 1        tactcctcacataataactgngaagcctaatgagg 35
                |||||| ||||||||||| | ||||||||||||||
Sbjct: 29789741 tactccccacataataacagtgaagcctaatgagg 29789707
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>emb|AL662981.3|OSJN00182 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086O06,
             complete sequence
          Length = 178552

 Score =  105 bits (53), Expect = 3e-20
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                         
Query: 33    aggatgttgcctcgaaaataatgtctttttcacaacaaggcccacgtactacatgtataa 92
             |||||||||| || ||||||||| | ||||||||||||||||| || |||||||| ||||
Sbjct: 70021 aggatgttgcttcaaaaataatggcattttcacaacaaggccctcgcactacatgcataa 69962

                                                            
Query: 93    tctcagcaaacggngcgctgtncacagcaacactccgtcaaccagca 139
             | |||||||| || || || | |||||||||||| ||||||||||||
Sbjct: 69961 tttcagcaaatggcgctctttgcacagcaacactacgtcaaccagca 69915



 Score = 48.1 bits (24), Expect = 0.007
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                
Query: 1     tactcctcacataataactgngaagcctaatgagg 35
             |||||| ||||||||||| | ||||||||||||||
Sbjct: 70667 tactccccacataataacagtgaagcctaatgagg 70633
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>gb|AY111025.1| Zea mays CL13673_1 mRNA sequence
          Length = 1303

 Score =  101 bits (51), Expect = 5e-19
 Identities = 115/139 (82%)
 Strand = Plus / Minus

                                                                       
Query: 1   tactcctcacataataactgngaagcctaatgaggatgttgcctcgaaaataatgtcttt 60
           |||||| ||||||||||||| |||||| |||||||||||||| || ||||||||| |   
Sbjct: 905 tactccccacataataactgtgaagcccaatgaggatgttgcgtccaaaataatggcnnn 846

                                                                       
Query: 61  ttcacaacaaggcccacgtactacatgtataatctcagcaaacggngcgctgtncacagc 120
             | ||||||||||| || |||||||| ||||| || ||||| || || |||| ||| ||
Sbjct: 845 nncccaacaaggcccgcgcactacatgcataatttcggcaaatggtgctctgtgcacggc 786

                              
Query: 121 aacactccgtcaaccagca 139
           |||||| || |||||||||
Sbjct: 785 aacactgcggcaaccagca 767
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>ref|NM_123894.2| Arabidopsis thaliana transcription factor AT5G45260 mRNA, complete
            cds
          Length = 4415

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   taatgtctttttcacaacaa 70
            ||||||||||||||||||||
Sbjct: 3936 taatgtctttttcacaacaa 3917
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>emb|CR854945.5| Zebrafish DNA sequence from clone DKEY-155H10 in linkage group 13,
            complete sequence
          Length = 231490

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 48   aaataatgtctttttcacaa 67
            ||||||||||||||||||||
Sbjct: 8863 aaataatgtctttttcacaa 8882
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>dbj|AB188827.1| Arabidopsis thaliana SLH1 gene gene for disease resistance protein
             SLH1, complete cds
          Length = 41146

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    taatgtctttttcacaacaa 70
             ||||||||||||||||||||
Sbjct: 38200 taatgtctttttcacaacaa 38181
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>gb|AC092836.4| Homo sapiens BAC clone RP11-50B16 from 2, complete sequence
          Length = 165768

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tacatgtataatctcagcaa 101
              ||||||||||||||||||||
Sbjct: 153779 tacatgtataatctcagcaa 153760
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>dbj|AB020744.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9E15
          Length = 62052

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    taatgtctttttcacaacaa 70
             ||||||||||||||||||||
Sbjct: 12074 taatgtctttttcacaacaa 12055
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>dbj|AK117156.1| Arabidopsis thaliana At5g45260 mRNA for putative disease resistance
            protein, complete cds, clone: RAFL16-69-P09
          Length = 4414

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 51   taatgtctttttcacaacaa 70
            ||||||||||||||||||||
Sbjct: 3934 taatgtctttttcacaacaa 3915
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>gb|AY105124.1| Zea mays PCO138363 mRNA sequence
          Length = 1066

 Score = 40.1 bits (20), Expect = 1.7
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                      
Query: 32 gaggatgttgcctcgaaaataatgtctttttcacaacaaggccc 75
          ||||||||||| || ||||||||| | || ||||| ||||||||
Sbjct: 42 gaggatgttgcttcaaaaataatgacattctcacagcaaggccc 85
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>ref|XM_455085.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F00132g predicted mRNA
          Length = 1215

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 50 ataatgtctttttcacaac 68
          |||||||||||||||||||
Sbjct: 5  ataatgtctttttcacaac 23
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>ref|XM_453952.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D20031g predicted mRNA
          Length = 1215

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 50 ataatgtctttttcacaac 68
          |||||||||||||||||||
Sbjct: 5  ataatgtctttttcacaac 23
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>ref|XM_452199.1| Kluyveromyces lactis NRRL Y-1140, KLLA0C00110g predicted mRNA
          Length = 1215

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 50 ataatgtctttttcacaac 68
          |||||||||||||||||||
Sbjct: 5  ataatgtctttttcacaac 23
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>gb|AC127553.3| Mus musculus BAC clone RP24-553F11 from chromosome 5, complete sequence
          Length = 159693

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     tacatgtataatctcagca 100
              |||||||||||||||||||
Sbjct: 123128 tacatgtataatctcagca 123146
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>gb|AC125129.5| Mus musculus BAC clone RP24-308H8 from chromosome 9, complete
            sequence
          Length = 142233

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 82   tacatgtataatctcagca 100
            |||||||||||||||||||
Sbjct: 6443 tacatgtataatctcagca 6425
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>emb|AL512380.20| Human DNA sequence from clone RP11-204E9 on chromosome 6 Contains part
             of a novel gene, complete sequence
          Length = 150972

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 81    ctacatgtataatctcagc 99
             |||||||||||||||||||
Sbjct: 70683 ctacatgtataatctcagc 70665
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>emb|AL133321.11| Human DNA sequence from clone RP13-17E1 on chromosome X Contains part
            of the PCDH11X gene for protocadherin 11 X-linked,
            complete sequence
          Length = 170805

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 47   aaaataatgtctttttcac 65
            |||||||||||||||||||
Sbjct: 7854 aaaataatgtctttttcac 7836
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>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
            Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 50   ataatgtctttttcacaac 68
            |||||||||||||||||||
Sbjct: 2309 ataatgtctttttcacaac 2327
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>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL
            Y-1140 of Kluyveromyces lactis
          Length = 2234072

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 50   ataatgtctttttcacaac 68
            |||||||||||||||||||
Sbjct: 2517 ataatgtctttttcacaac 2535
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>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1715506

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 50      ataatgtctttttcacaac 68
               |||||||||||||||||||
Sbjct: 1712938 ataatgtctttttcacaac 1712920
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>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL
            Y-1140 of Kluyveromyces lactis
          Length = 1753957

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 50   ataatgtctttttcacaac 68
            |||||||||||||||||||
Sbjct: 2436 ataatgtctttttcacaac 2454
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
            Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 50   ataatgtctttttcacaac 68
            |||||||||||||||||||
Sbjct: 2624 ataatgtctttttcacaac 2642
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>gb|AC127900.6| Homo sapiens 12 BAC RP11-426H7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 38279

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    gaagcctaatgaggatgtt 40
             |||||||||||||||||||
Sbjct: 34532 gaagcctaatgaggatgtt 34514
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>gb|AC096751.3| Homo sapiens BAC clone RP11-440I14 from 4, complete sequence
          Length = 174642

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 47     aaaataatgtctttttcac 65
              |||||||||||||||||||
Sbjct: 146492 aaaataatgtctttttcac 146510
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 28       taatgaggatgttgcctcg 46
                |||||||||||||||||||
Sbjct: 20133078 taatgaggatgttgcctcg 20133096
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>gb|AC150254.5| Aedes aegypti, clone XX-88A20, complete sequence
          Length = 116482

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 79    tactacatgtataatctca 97
             |||||||||||||||||||
Sbjct: 82239 tactacatgtataatctca 82257
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>gb|AY437830.1|AY437829S2 Kluyveromyces lactis isolate P11 3' terminal EcoRV subtelomeric
            region
          Length = 3597

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   ataatgtctttttcacaac 68
            |||||||||||||||||||
Sbjct: 1548 ataatgtctttttcacaac 1530
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>gb|AY437828.1| Kluyveromyces lactis isolate P10 terminal ClaI subtelomeric region
          Length = 9863

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   ataatgtctttttcacaac 68
            |||||||||||||||||||
Sbjct: 7829 ataatgtctttttcacaac 7811
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>gb|AY437823.1| Kluyveromyces lactis isolate P6 terminal ClaI subtelomeric region
          Length = 4110

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 50   ataatgtctttttcacaac 68
            |||||||||||||||||||
Sbjct: 2659 ataatgtctttttcacaac 2641
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>dbj|AP004005.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1188_F05
          Length = 117045

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    taatgaggatgttgcctcg 46
             |||||||||||||||||||
Sbjct: 79624 taatgaggatgttgcctcg 79642
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>gb|AC151971.3| Mus musculus BAC clone RP24-282C4 from 9, complete sequence
          Length = 179607

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 82     tacatgtataatctcagca 100
              |||||||||||||||||||
Sbjct: 152155 tacatgtataatctcagca 152137
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>gb|AF103320.1|AF103320 Homo sapiens clone Z127 immunoglobulin heavy chain variable region
           mRNA, partial cds
          Length = 340

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 40  tgcctcgaaaataatgtct 58
           |||||||||||||||||||
Sbjct: 291 tgcctcgaaaataatgtct 273
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>gb|AC103664.12| Mus musculus chromosome 7, clone RP23-348F4, complete sequence
          Length = 222413

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 65     caacaaggcccacgtacta 83
              |||||||||||||||||||
Sbjct: 160858 caacaaggcccacgtacta 160840
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>gb|AC015535.11| Mus musculus chromosome 5, clone RP23-39M18, complete sequence
          Length = 263382

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 82     tacatgtataatctcagca 100
              |||||||||||||||||||
Sbjct: 242025 tacatgtataatctcagca 242007
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>gb|AC122240.4| Mus musculus BAC clone RP23-145L9 from 6, complete sequence
          Length = 211740

 Score = 38.2 bits (19), Expect = 6.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 23    aagcctaatgaggatgttg 41
             |||||||||||||||||||
Sbjct: 79784 aagcctaatgaggatgttg 79766


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 978,838
Number of Sequences: 3902068
Number of extensions: 978838
Number of successful extensions: 64501
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64387
Number of HSP's gapped (non-prelim): 113
length of query: 139
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 118
effective length of database: 17,151,101,840
effective search space: 2023830017120
effective search space used: 2023830017120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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