ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal7f06 |
|---|---|
| Clone Library Name | barley_pub |
>RS15_HALMA (P05762) 30S ribosomal protein S15P/S13e (HmaS15) (HS11)| Length = 155 Score = 35.0 bits (79), Expect = 0.14 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Frame = +1 Query: 310 EEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEKVTEIQRKRHSAPDV- 486 E+A+ VE+ + P E+ LKL +E P PD +KVTEI + + PD+ Sbjct: 29 EDAIEARVVELAEQGHSPSEIGLKLRDEGVQGTPIPDVSLATGKKVTEILEENEAEPDLP 88 Query: 487 -SFKGRVRKVAKMEEVSDDDSDD 552 + + + ++ + D++ D Sbjct: 89 EDLRNLLERAVRLRDHMDENPGD 111
>PR1_SAMNI (Q41359) Pathogenesis-related protein PR-1 type precursor| Length = 167 Score = 35.0 bits (79), Expect = 0.14 Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 3/45 (6%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NGR---LCFWSPGASSEAGRR 392 +CGH++ WR S R GC ++ C NG C +SP + AG+R Sbjct: 122 VCGHYTQVVWRNSVRIGCARVRCNNGAWFITCNYSP-PGNYAGQR 165
>PR04_LYCES (Q04108) Pathogenesis-related leaf protein 4 precursor (P4)| Length = 159 Score = 33.9 bits (76), Expect = 0.32 Identities = 13/26 (50%), Positives = 16/26 (61%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NG 344 MCGH++ WR S R GC + C NG Sbjct: 114 MCGHYTQVVWRNSVRLGCGRARCNNG 139
>PR1C_TOBAC (P09042) Pathogenesis-related protein 1C precursor (PR-1C)| Length = 168 Score = 33.9 bits (76), Expect = 0.32 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NG 344 +CGH++ WR S R GC ++ C NG Sbjct: 123 VCGHYTQVVWRNSVRVGCARVQCNNG 148
>PR1A_TOBAC (P08299) Pathogenesis-related protein 1A precursor (PR-1A)| Length = 168 Score = 33.9 bits (76), Expect = 0.32 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NG 344 +CGH++ WR S R GC ++ C NG Sbjct: 123 VCGHYTQVVWRNSVRVGCARVQCNNG 148
>RS15_HALSA (Q9HRA2) 30S ribosomal protein S15P/S13e| Length = 155 Score = 33.5 bits (75), Expect = 0.42 Identities = 22/83 (26%), Positives = 40/83 (48%), Gaps = 2/83 (2%) Frame = +1 Query: 310 EEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEKVTEIQRKRHSAPDV- 486 E+A+ + VE+ + P ++ LKL +E P PD +KVTEI + P++ Sbjct: 30 EDAIEERVVELAEQGHDPSQIGLKLRDEGVQGTPVPDVKLATGKKVTEILEAHDAEPELP 89 Query: 487 -SFKGRVRKVAKMEEVSDDDSDD 552 F+ + K ++ E + + D Sbjct: 90 EDFRNLLEKAVRLHEHVEANGQD 112
>PR1_ARATH (P33154) Pathogenesis-related protein 1 precursor (PR-1)| Length = 161 Score = 33.5 bits (75), Expect = 0.42 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NG 344 +CGH++ WR S R GC K+ C NG Sbjct: 116 VCGHYTQVVWRKSVRLGCAKVRCNNG 141
>BRCA2_RAT (O35923) Breast cancer type 2 susceptibility protein homolog (Fanconi| anemia group D1 protein homolog) Length = 3343 Score = 33.5 bits (75), Expect = 0.42 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%) Frame = -2 Query: 433 LAEKNQVLEVKGNFLLPASEEAPGDQKQSLPFQHHILLQP----PLFEPLQYSEDQ*PHI 266 L E ++++E KG L P+ G K F HH+ L+P P + E Q PH+ Sbjct: 2253 LNEFDRIIESKGKSLTPSKSTPDGTIKDRRLFTHHMSLEPVTCGPFCSSKERQETQSPHV 2312
>PR1B_TOBAC (P07053) Pathogenesis-related protein 1B precursor (PR-1B)| Length = 168 Score = 33.5 bits (75), Expect = 0.42 Identities = 12/26 (46%), Positives = 17/26 (65%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NG 344 +CGH++ WR S R GC ++ C NG Sbjct: 123 VCGHYTQVVWRNSVRVGCARVKCNNG 148
>NOP14_YEAST (Q99207) Nucleolar complex protein 14 (U3 small nucleolar| RNA-associated protein 2) (U3 snoRNA-associated protein 2) Length = 810 Score = 32.3 bits (72), Expect = 0.93 Identities = 27/98 (27%), Positives = 48/98 (48%) Frame = +1 Query: 235 KLAKEALAENKCVVIGLQSTGEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPK 414 ++ KE +A++K Q + E+ + ED +S EL++ ++N P+ PK Sbjct: 209 EVMKEVIAKSKFYKQERQKA-QGIMEDQIDNLDDNFEDVMS---ELMMTQPKKN-PMEPK 263 Query: 415 PDSFQQGEEKVTEIQRKRHSAPDVSFKGRVRKVAKMEE 528 D ++ + KV E+Q + +AP K K A+ EE Sbjct: 264 TDLDKEYDIKVKELQLDKRAAPSDRTKTEEEKNAEAEE 301
>PLCB1_HUMAN (Q9NQ66) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154) Length = 1216 Score = 32.3 bits (72), Expect = 0.93 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = +1 Query: 295 GEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEKVTEIQRKRHS 474 G+A E + KY +E + P +L+ K++ +N K S G++K++E +S Sbjct: 433 GDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKKSHK-SSEGSGKKKLSEQASNTYS 491 Query: 475 APDVSFKGRVRKVAKMEEVSDDDSDD 552 F+ + + SDDD DD Sbjct: 492 DSSSMFEPSSPGAGEADTESDDDDDD 517
>BRCA2_MOUSE (P97929) Breast cancer type 2 susceptibility protein homolog (Fanconi| anemia group D1 protein homolog) Length = 3329 Score = 32.0 bits (71), Expect = 1.2 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 4/60 (6%) Frame = -2 Query: 433 LAEKNQVLEVKGNFLLPASEEAPGDQKQSLPFQHHILLQPPLFEPLQYSED----Q*PHI 266 L E ++++E KG L P+ G K F HH+ L+P P S++ Q PH+ Sbjct: 2238 LNEFDRIIESKGKSLTPSKSTPDGTVKDRSLFTHHMSLEPVTCGPFCSSKERQGAQRPHL 2297
>PLCB1_RAT (P10687) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154) Length = 1216 Score = 32.0 bits (71), Expect = 1.2 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = +1 Query: 295 GEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEKVTEIQRKRHS 474 G+A E + KY +E + P +L+ K++ +N K S G++K++E +S Sbjct: 433 GDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKKSHK-SSEGSGKKKLSEQASNTYS 491 Query: 475 APDVSFKGRVRKVAKMEEVSDDDSDD 552 F+ + + SDDD DD Sbjct: 492 DSSSVFEPSSPGAGEADTESDDDDDD 517
>PLCB1_MOUSE (Q9Z1B3) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154) Length = 1216 Score = 32.0 bits (71), Expect = 1.2 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = +1 Query: 295 GEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEKVTEIQRKRHS 474 G+A E + KY +E + P +L+ K++ +N K S G++K++E +S Sbjct: 433 GDALLMEPLEKYPLESGVPLPSPMDLMYKILVKNKKKSHK-SSEGSGKKKLSEQASNTYS 491 Query: 475 APDVSFKGRVRKVAKMEEVSDDDSDD 552 F+ + + SDDD DD Sbjct: 492 DSSSVFEPSSPGAGEADTESDDDDDD 517
>PLCB1_BOVIN (P10894) 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase| beta 1 (EC 3.1.4.11) (Phosphoinositide phospholipase C) (Phospholipase C-beta-1) (PLC-beta-1) (PLC-I) (PLC-154) Length = 1216 Score = 32.0 bits (71), Expect = 1.2 Identities = 23/86 (26%), Positives = 40/86 (46%) Frame = +1 Query: 295 GEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEKVTEIQRKRHS 474 G+A E + KY +E + P +L+ K++ +N K S G++K++E +S Sbjct: 433 GDALLMEPLDKYPLESGVPLPSPMDLMYKILVKNKKKSHK-SSEGSGKKKLSEQASNTYS 491 Query: 475 APDVSFKGRVRKVAKMEEVSDDDSDD 552 F+ + + SDDD DD Sbjct: 492 DSSSVFEPSSPGAGEADTESDDDDDD 517
>PR1_HORVU (Q05968) Pathogenesis-related protein 1 precursor| Length = 164 Score = 32.0 bits (71), Expect = 1.2 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NGRLCF 356 +CGH++ WR S GC ++ C N R F Sbjct: 118 VCGHYTQVVWRASTSIGCARVVCNNNRGVF 147
>PR13_HORVU (P35793) Pathogenesis-related protein PRB1-3 precursor (PR-1B)| (HV-8) Length = 164 Score = 32.0 bits (71), Expect = 1.2 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NGRLCF 356 +CGH++ WR S GC ++ C N R F Sbjct: 118 VCGHYTQVVWRASTSIGCARVVCNNNRGVF 147
>PR12_HORVU (P35792) Pathogenesis-related protein PRB1-2 precursor| Length = 164 Score = 32.0 bits (71), Expect = 1.2 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NGRLCF 356 +CGH++ WR S GC ++ C N R F Sbjct: 118 VCGHYTQVVWRASTSIGCARVVCNNNRGVF 147
>GCC1_HUMAN (Q96CN9) GRIP and coiled-coil domain-containing protein 1 (Golgi| coiled coil protein 1) Length = 775 Score = 31.2 bits (69), Expect = 2.1 Identities = 34/154 (22%), Positives = 64/154 (41%) Frame = +1 Query: 4 RHEADFDTVEAPLEERMMNMYGKAAEFWAELRLELLSAGEISGEEKGISNQIWRLYWASH 183 R EA + + +++ + + KA E A L GE+ G ++ I+ RL H Sbjct: 181 RMEASYLADKKKMKQDLEDASNKAEEERARLE------GELKGLQEQIAETKARLITQQH 234 Query: 184 QRFFRHMCMSAKVPAVVKLAKEALAENKCVVIGLQSTGEARTEEAVTKYGVEMEDFVSGP 363 R + + + KL +E + + + + L+ T EA A +ME F Sbjct: 235 DRAQEQSDHALMLRELQKLLQEERTQRQDLELRLEETREALAGRAYA--AEQMEGFELQT 292 Query: 364 RELLLKLVEENYPLPPKPDSFQQGEEKVTEIQRK 465 ++L ++ E L D Q + ++ E+Q + Sbjct: 293 KQLTREVEELKSELQAIRDEKNQPDPRLQELQEE 326
>ENGD_SHIFL (P0ABU4) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%) Frame = +1 Query: 265 KCVVIGLQSTGEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEK 444 KC ++GL + G++ A+TK G+E +F +E N + P PD ++ Sbjct: 3 KCGIVGLPNVGKSTLFNALTKAGIEAANFP-------FCTIEPNTGVVPMPD---PRLDQ 52 Query: 445 VTEIQRKRHSAPD----VSFKGRVRKVAKME 525 + EI + + + P V G V+ +K E Sbjct: 53 LAEIVKPQRTLPTTMEFVDIAGLVKGASKGE 83
>ENGD_ECOLI (P0ABU2) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%) Frame = +1 Query: 265 KCVVIGLQSTGEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEK 444 KC ++GL + G++ A+TK G+E +F +E N + P PD ++ Sbjct: 3 KCGIVGLPNVGKSTLFNALTKAGIEAANFP-------FCTIEPNTGVVPMPD---PRLDQ 52 Query: 445 VTEIQRKRHSAPD----VSFKGRVRKVAKME 525 + EI + + + P V G V+ +K E Sbjct: 53 LAEIVKPQRTLPTTMEFVDIAGLVKGASKGE 83
>ENGD_ECO57 (P0ABU3) GTP-dependent nucleic acid-binding protein engD| Length = 362 Score = 30.8 bits (68), Expect = 2.7 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 4/91 (4%) Frame = +1 Query: 265 KCVVIGLQSTGEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLPPKPDSFQQGEEK 444 KC ++GL + G++ A+TK G+E +F +E N + P PD ++ Sbjct: 3 KCGIVGLPNVGKSTLFNALTKAGIEAANFP-------FCTIEPNTGVVPMPD---PRLDQ 52 Query: 445 VTEIQRKRHSAPD----VSFKGRVRKVAKME 525 + EI + + + P V G V+ +K E Sbjct: 53 LAEIVKPQRTLPTTMEFVDIAGLVKGASKGE 83
>YGGP_ECOLI (P52048) Hypothetical protein yggP| Length = 425 Score = 30.8 bits (68), Expect = 2.7 Identities = 17/45 (37%), Positives = 27/45 (60%) Frame = +1 Query: 139 KGISNQIWRLYWASHQRFFRHMCMSAKVPAVVKLAKEALAENKCV 273 KG+S+ + L + F + + A VPAVV++A E LAE+ C+ Sbjct: 240 KGMSDPVQMLRALTGDAGFDDIFVYAAVPAVVEMADELLAEDGCL 284
>UBCX_PICAN (O60015) Ubiquitin-conjugating enzyme E2-21 kDa (EC 6.3.2.19)| (Ubiquitin-protein ligase) (Ubiquitin carrier protein) (Peroxin-4) Length = 188 Score = 30.4 bits (67), Expect = 3.5 Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 11/48 (22%) Frame = +1 Query: 385 VEENYPL-PPKPDSFQQGEEKVTEIQRKRHSA----------PDVSFK 495 + NYPL PPK GEEK+ ++QRK S P+V+FK Sbjct: 67 IPTNYPLDPPKIKFVVFGEEKIRQLQRKTSSGARKVCYKMPHPNVNFK 114
>PR1A_LYCES (Q08697) Pathogenesis-related protein 1A1 precursor (PR-1A1)| Length = 175 Score = 30.4 bits (67), Expect = 3.5 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NG 344 +CGH++ WR S R GC ++ C +G Sbjct: 113 VCGHYTQVVWRKSVRLGCARVRCNSG 138
>CRVP_TRIMU (P79845) Cysteine-rich venom protein precursor (TM-CRVP)| Length = 240 Score = 30.4 bits (67), Expect = 3.5 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 5/51 (9%) Frame = +3 Query: 273 GHWSSEYWRGSNRGGCNKIWC*NGR-----LCFWSPGASSEAGRRKLPFTS 410 GH++ W S RGGC +C + + +C + P A + G+ P+TS Sbjct: 133 GHYTQIVWYKSYRGGCAAAYCPSSKYRYFYVCQYCP-AGNMIGKTATPYTS 182
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 29.6 bits (65), Expect = 6.0 Identities = 26/100 (26%), Positives = 44/100 (44%), Gaps = 1/100 (1%) Frame = +1 Query: 184 QRFFRHMCMSAKVPAVVKLAKEALAENKCVVIGLQSTGEARTEEAVTKYGVEMEDFV-SG 360 Q+ H C K V + + A+ +++ Q G+ + + V +E S Sbjct: 48 QKGMPHKCYHGKTGRVYNVTQHAVG----IIVNKQVKGKILAK----RINVRIEHIKHSK 99 Query: 361 PRELLLKLVEENYPLPPKPDSFQQGEEKVTEIQRKRHSAP 480 R+ LK V+EN ++ +EK T +Q KRH+AP Sbjct: 100 SRDSFLKRVKEN------DQKKKEAKEKGTWVQLKRHAAP 133
>RBBP6_MOUSE (P97868) Retinoblastoma-binding protein 6 (p53-associated cellular| protein of testis) (Proliferation potential-related protein) (Protein P2P-R) Length = 1790 Score = 29.6 bits (65), Expect = 6.0 Identities = 20/47 (42%), Positives = 25/47 (53%) Frame = +1 Query: 412 KPDSFQQGEEKVTEIQRKRHSAPDVSFKGRVRKVAKMEEVSDDDSDD 552 KP S Q +EKVT RK HS + + + K AK E+V D S D Sbjct: 1074 KPSSSSQKDEKVTGTPRKAHSKS--AKEHQEAKPAKDEKVKKDCSKD 1118
>SSBR_ECOLI (P28045) Plasmid-derived single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 174 Score = 29.6 bits (65), Expect = 6.0 Identities = 25/99 (25%), Positives = 44/99 (44%) Frame = +1 Query: 229 VVKLAKEALAENKCVVIGLQSTGEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLP 408 + ++A E L + V I Q + + +T+Y E+ +G ++L ++N Sbjct: 63 LAEVAGEYLRKGAQVYIEGQLRTRSWDDNGITRYITEILVKTTGTMQMLGSAPQQNAQAQ 122 Query: 409 PKPDSFQQGEEKVTEIQRKRHSAPDVSFKGRVRKVAKME 525 PKP Q G+ + + +K KGR RK A+ E Sbjct: 123 PKPQ--QNGQPQSADATKK----GGAKTKGRERKAAQPE 155
>PRMS_MAIZE (Q00008) Pathogenesis-related protein PRMS precursor| Length = 167 Score = 29.3 bits (64), Expect = 7.9 Identities = 11/37 (29%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NGR----LCFWSP 365 +CGH++ WR + GC ++ C + R +C + P Sbjct: 121 VCGHYTQVVWRATTSIGCARVVCRDNRGVFIICNYEP 157
>PRB1_TOBAC (P11670) Basic form of pathogenesis-related protein 1 precursor| (PRP 1) Length = 177 Score = 29.3 bits (64), Expect = 7.9 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = +3 Query: 267 MCGHWSSEYWRGSNRGGCNKIWC*NG 344 +CGH++ WR S R GC ++ NG Sbjct: 114 VCGHYTQVVWRNSVRLGCARVRSNNG 139
>YO11_MOUSE (P11260) Hypothetical protein ORF-1137| Length = 379 Score = 29.3 bits (64), Expect = 7.9 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 3/50 (6%) Frame = +1 Query: 337 EMEDF-VSGPRELLLKLVEENYPLPPK--PDSFQQGEEKVTEIQRKRHSA 477 E EDF + GP + K++EEN+P K P Q+ + +KR+S+ Sbjct: 209 ENEDFQLKGPANIFNKIIEENFPNIKKEMPMIIQEAYRTPNRLDQKRNSS 258
>SSBP_ECOLI (P18022) Plasmid-derived single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 174 Score = 29.3 bits (64), Expect = 7.9 Identities = 25/99 (25%), Positives = 44/99 (44%) Frame = +1 Query: 229 VVKLAKEALAENKCVVIGLQSTGEARTEEAVTKYGVEMEDFVSGPRELLLKLVEENYPLP 408 + ++A E L + V I Q + + +T+Y E+ +G ++L ++N Sbjct: 63 LAEVAGEYLRKGAQVYIEGQLRTRSWDDNGITRYITEILVKTTGTMQMLGSAPQQNAQAQ 122 Query: 409 PKPDSFQQGEEKVTEIQRKRHSAPDVSFKGRVRKVAKME 525 PKP Q G+ + + +K KGR RK A+ E Sbjct: 123 PKPQ--QNGQPQSADATKK----GGAKTKGRGRKAAQPE 155 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.132 0.377 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 64,705,430 Number of Sequences: 219361 Number of extensions: 1126755 Number of successful extensions: 2855 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 2810 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2852 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4545742239 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
