ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal6p13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK105883.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
2dbj|AK067058.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
3dbj|AK059108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 64 6e-07
4gb|AC006464.3| Homo sapiens BAC clone RP11-436C12 from 2, comple... 48 0.038
5gb|AC161231.7| Mus musculus chromosome 5, clone RP24-241P24, com... 44 0.59
6gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, com... 44 0.59
7dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
8dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.59
9gb|AC134985.11| Mus musculus chromosome 5, clone RP24-432L3, com... 44 0.59
10ref|XM_520451.1| PREDICTED: Pan troglodytes similar to FLJ20433 ... 42 2.3
11gb|AC185987.2| Pan troglodytes BAC clone CH251-400P17 from chrom... 42 2.3
12gb|BC069205.1| Homo sapiens cDNA clone IMAGE:6574528, with appar... 42 2.3
13gb|AC183602.2| Pan troglodytes BAC clone CH251-350L8 from chromo... 42 2.3
14gb|AC182459.3| Pan troglodytes BAC clone CH251-706C19 from chrom... 42 2.3
15gb|BC037355.1| Homo sapiens hypothetical protein FLJ20433, mRNA ... 42 2.3
16emb|BX322799.22| Human DNA sequence from clone RP13-927H1 on chr... 42 2.3
17emb|CR788264.3| Human DNA sequence from clone RP11-436G20 on chr... 42 2.3
18emb|AL772307.15| Human DNA sequence from clone RP11-416B15 on ch... 42 2.3
19emb|AL772155.6| Human DNA sequence from clone RP11-149F8 on chro... 42 2.3
20gb|BC110879.1| Homo sapiens hypothetical protein FLJ20433, mRNA ... 42 2.3
21emb|AL591438.6| Human DNA sequence from clone RP11-452D2 on chro... 42 2.3
22emb|AL591479.3| Human DNA sequence from clone RP11-154P18 on chr... 42 2.3
23emb|AL354718.10| Human DNA sequence from clone RP11-187C18 on ch... 42 2.3
24gb|AC183605.3| Pan troglodytes BAC clone CH251-334E18 from chrom... 42 2.3
25emb|AL592220.6| Human DNA sequence from clone RP11-12P21 on chro... 42 2.3
26gb|AC098860.2| Homo sapiens BAC clone RP11-229G4 from 4, complet... 42 2.3
27gb|AC104821.4| Homo sapiens BAC clone RP11-745L13 from 4, comple... 42 2.3
28gb|AC097509.2| Homo sapiens chromosome 4 clone RP11-381P8, compl... 42 2.3
29emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chr... 42 2.3
30emb|CR382285.2| Human DNA sequence from clone bP-21201H5 on chro... 42 2.3
31gb|AC073916.41| Homo sapiens 12 BAC RP11-408I18 (Roswell Park Ca... 42 2.3
32gb|BC033079.1| Homo sapiens, clone IMAGE:5455686, mRNA 42 2.3
33emb|AL162252.17| Human DNA sequence from clone RP11-55J24 on chr... 42 2.3
34gb|BC098920.2| Rattus norvegicus myosin light chain, regulatory ... 42 2.3
35gb|AC102212.4| Mus musculus chromosome 8, clone RP24-374D15, com... 42 2.3
36gb|AY037805.1| Oryza sativa (japonica cultivar-group) OSA15 prot... 40 9.2
37gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
38gb|AY466107.1| Oryza sativa (japonica cultivar-group) PSAG prote... 40 9.2
39gb|AY466106.1| Oryza sativa (japonica cultivar-group) PSAG prote... 40 9.2
40gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, co... 40 9.2
41gb|AC147618.3| Mus musculus chromosome 19 clone RP24-245M20, com... 40 9.2
42emb|BX936358.10| Zebrafish DNA sequence from clone CH211-159A10 ... 40 9.2
43emb|AL356583.28| Human DNA sequence from clone RP11-690C23 on ch... 40 9.2
44gb|AC093550.3| Drosophila melanogaster 3L BAC RP98-24K7 (Roswell... 40 9.2
45gb|AC010156.6| Drosophila melanogaster 3L NOVECTOR RP98-27H3 (Ro... 40 9.2
46gb|AC010444.5| Homo sapiens chromosome 5 clone CTD-2234B10, comp... 40 9.2
47gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome... 40 9.2
48gb|AC026405.5| Homo sapiens chromosome 5 clone CTC-347N9, comple... 40 9.2
49gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, com... 40 9.2
50gb|AC148697.1| Macaca mulatta Major Histocompatibility Complex B... 40 9.2
51dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
52gb|AC018662.3|AC018662 Human Chromosome 7 clone RP11-339C9, comp... 40 9.2
53gb|AC008039.1|AC008039 Homo sapiens clone SCb-391H5 from 7q31, c... 40 9.2
54dbj|AK104683.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
55dbj|AK069108.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
56gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36... 40 9.2
57dbj|AP001527.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.2
58emb|CR792434.8| Zebrafish DNA sequence from clone CH211-219O9 in... 40 9.2
59gb|AC134607.5| Mus musculus BAC clone RP23-65J2 from chromosome ... 40 9.2
60gb|AC149584.4| Mus musculus BAC clone RP24-298L13 from 8, comple... 40 9.2
61gb|AC140929.4| Mus musculus BAC clone RP23-258I3 from 8, complet... 40 9.2
62dbj|AP004511.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 9.2
63dbj|AB028136.1| Gallus gallus prkdc gene for DNA-dependent prote... 40 9.2 
>dbj|AK105883.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-D05, full
           insert sequence
          Length = 1095

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 566 atagatgatgattctgaaactactgctggaccagcaggggaagctcttgatgagcatgtg 625
           ||||| |||||||||||||||||  |||||| ||||||||| ||  ||||||||||||||
Sbjct: 549 atagaagatgattctgaaactacccctggacaagcaggggatgcagttgatgagcatgtg 608
to top
>dbj|AK067058.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013091M15, full
           insert sequence
          Length = 1243

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 566 atagatgatgattctgaaactactgctggaccagcaggggaagctcttgatgagcatgtg 625
           ||||| |||||||||||||||||  |||||| ||||||||| ||  ||||||||||||||
Sbjct: 550 atagaagatgattctgaaactacccctggacaagcaggggatgcagttgatgagcatgtg 609
to top
>dbj|AK059108.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-D10, full
           insert sequence
          Length = 1147

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 53/60 (88%)
 Strand = Plus / Plus

                                                                       
Query: 566 atagatgatgattctgaaactactgctggaccagcaggggaagctcttgatgagcatgtg 625
           ||||| |||||||||||||||||  |||||| ||||||||| ||  ||||||||||||||
Sbjct: 549 atagaagatgattctgaaactacccctggacaagcaggggatgcagttgatgagcatgtg 608
to top
>gb|AC006464.3| Homo sapiens BAC clone RP11-436C12 from 2, complete sequence
          Length = 99908

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 309   ttgaagcactcaatactgggggtt 332
             ||||||||||||||||||||||||
Sbjct: 77734 ttgaagcactcaatactgggggtt 77711
to top
>gb|AC161231.7| Mus musculus chromosome 5, clone RP24-241P24, complete sequence
          Length = 193682

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 349  gcctgtctcacacaggcagccc 370
            ||||||||||||||||||||||
Sbjct: 1137 gcctgtctcacacaggcagccc 1116
to top
>gb|AC161348.2| Mus musculus chromosome 5, clone RP23-393E10, complete sequence
          Length = 221768

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 349   gcctgtctcacacaggcagccc 370
             ||||||||||||||||||||||
Sbjct: 42274 gcctgtctcacacaggcagccc 42295
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 566      atagatgatgattctgaaactactgctggaccagcagg 603
                ||||| |||||||||||||||||  |||||| ||||||
Sbjct: 40111746 atagaagatgattctgaaactacccctggacaagcagg 40111783
to top
>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0678F11
          Length = 154292

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 566   atagatgatgattctgaaactactgctggaccagcagg 603
             ||||| |||||||||||||||||  |||||| ||||||
Sbjct: 54830 atagaagatgattctgaaactacccctggacaagcagg 54867
to top
>gb|AC134985.11| Mus musculus chromosome 5, clone RP24-432L3, complete sequence
          Length = 199782

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 349   gcctgtctcacacaggcagccc 370
             ||||||||||||||||||||||
Sbjct: 61716 gcctgtctcacacaggcagccc 61695
to top
>ref|XM_520451.1| PREDICTED: Pan troglodytes similar to FLJ20433 protein (LOC464955),
           mRNA
          Length = 1086

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 88  gctcctcccagccccagccgctcct 112
           |||||| ||||||||||||||||||
Sbjct: 932 gctcctgccagccccagccgctcct 908
to top
>gb|AC185987.2| Pan troglodytes BAC clone CH251-400P17 from chromosome 9, complete
             sequence
          Length = 161307

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 562   gataatagatgatgattctga 582
             |||||||||||||||||||||
Sbjct: 38214 gataatagatgatgattctga 38194
to top
>gb|BC069205.1| Homo sapiens cDNA clone IMAGE:6574528, with apparent retained intron
          Length = 1457

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 88   gctcctcccagccccagccgctcct 112
            |||||| ||||||||||||||||||
Sbjct: 1278 gctcctgccagccccagccgctcct 1254
to top
>gb|AC183602.2| Pan troglodytes BAC clone CH251-350L8 from chromosome 9, complete
             sequence
          Length = 165959

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 562   gataatagatgatgattctga 582
             |||||||||||||||||||||
Sbjct: 50567 gataatagatgatgattctga 50547
to top
>gb|AC182459.3| Pan troglodytes BAC clone CH251-706C19 from chromosome 4, complete
              sequence
          Length = 166951

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 562    gataatagatgatgattctga 582
              |||||||||||||||||||||
Sbjct: 164899 gataatagatgatgattctga 164879
to top
>gb|BC037355.1| Homo sapiens hypothetical protein FLJ20433, mRNA (cDNA clone
           IMAGE:4622851), complete cds
          Length = 993

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 88  gctcctcccagccccagccgctcct 112
           |||||| ||||||||||||||||||
Sbjct: 817 gctcctgccagccccagccgctcct 793
to top
>emb|BX322799.22| Human DNA sequence from clone RP13-927H1 on chromosome 9, complete
             sequence
          Length = 143968

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 88    gctcctcccagccccagccgctcct 112
             |||||| ||||||||||||||||||
Sbjct: 62968 gctcctgccagccccagccgctcct 62992
to top
>emb|CR788264.3| Human DNA sequence from clone RP11-436G20 on chromosome 9 Contains a
             pseudogene similar to part of ribosomal protein L7a
             (RPL7A), complete sequence
          Length = 171101

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 562   gataatagatgatgattctga 582
             |||||||||||||||||||||
Sbjct: 49924 gataatagatgatgattctga 49904
to top
>emb|AL772307.15| Human DNA sequence from clone RP11-416B15 on chromosome 9 Contains a
             pseudogene similar to part of ribosomal protein L7a
             (RPL7A) and a CpG island, complete sequence
          Length = 161380

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 562   gataatagatgatgattctga 582
             |||||||||||||||||||||
Sbjct: 53277 gataatagatgatgattctga 53297
to top
>emb|AL772155.6| Human DNA sequence from clone RP11-149F8 on chromosome 9 Contains a novel
              gene, two novel pseudogenes, a  pseudogene similar to part
              of myosin V family protein, a tumor suppressor deleted in
              oral cancer-related 1 (DOC-1R) pseudogene, a pseudogene
              similar to part of prostaglandin E receptor 4 (subtype EP4)
              (PTGER4) and a CpG island, complete sequence
          Length = 163569

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 562    gataatagatgatgattctga 582
              |||||||||||||||||||||
Sbjct: 161235 gataatagatgatgattctga 161215
to top
>gb|BC110879.1| Homo sapiens hypothetical protein FLJ20433, mRNA (cDNA clone
           IMAGE:6065497), complete cds
          Length = 997

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 88  gctcctcccagccccagccgctcct 112
           |||||| ||||||||||||||||||
Sbjct: 823 gctcctgccagccccagccgctcct 799
to top
>emb|AL591438.6| Human DNA sequence from clone RP11-452D2 on chromosome 9 Contains a
              pseudogene similar to part of ribosomal protein L7a
              (RPL7A), a novel pseudogene and a CpG island, complete
              sequence
          Length = 176097

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 562    gataatagatgatgattctga 582
              |||||||||||||||||||||
Sbjct: 102823 gataatagatgatgattctga 102803
to top
>emb|AL591479.3| Human DNA sequence from clone RP11-154P18 on chromosome 9 Contains
            two novel pseudogene, a CDRT15 protein pseudogene, a
            pseudogene similar to part of meprin A, alpha (PABA
            peptide hydrolase) (MEP1A) and two CpG islands, complete
            sequence
          Length = 178933

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 562  gataatagatgatgattctga 582
            |||||||||||||||||||||
Sbjct: 2294 gataatagatgatgattctga 2314
to top
>emb|AL354718.10| Human DNA sequence from clone RP11-187C18 on chromosome 9 Contains a
             pseudogene similar to part of ribosomal protein L7a
             (RPL7A), three novel genes, three novel pseudogene and two
             CpG islands, complete sequence
          Length = 175271

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 562   gataatagatgatgattctga 582
             |||||||||||||||||||||
Sbjct: 36827 gataatagatgatgattctga 36847
to top
>gb|AC183605.3| Pan troglodytes BAC clone CH251-334E18 from chromosome 4, complete
              sequence
          Length = 191017

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 562    gataatagatgatgattctga 582
              |||||||||||||||||||||
Sbjct: 148900 gataatagatgatgattctga 148920
to top
>emb|AL592220.6| Human DNA sequence from clone RP11-12P21 on chromosome 9 Contains a tumor
              suppressor deleted in oral cancer-related 1 (DOC-1R)
              pseudogene, a novel pseudogene and a CpG island, complete
              sequence
          Length = 163556

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 562    gataatagatgatgattctga 582
              |||||||||||||||||||||
Sbjct: 161263 gataatagatgatgattctga 161243
to top
>gb|AC098860.2| Homo sapiens BAC clone RP11-229G4 from 4, complete sequence
          Length = 119491

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 562    gataatagatgatgattctga 582
              |||||||||||||||||||||
Sbjct: 111652 gataatagatgatgattctga 111672
to top
>gb|AC104821.4| Homo sapiens BAC clone RP11-745L13 from 4, complete sequence
          Length = 93879

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 562   gataatagatgatgattctga 582
             |||||||||||||||||||||
Sbjct: 49731 gataatagatgatgattctga 49751
to top
>gb|AC097509.2| Homo sapiens chromosome 4 clone RP11-381P8, complete sequence
          Length = 62268

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 566   atagatgatgattctgaaact 586
             |||||||||||||||||||||
Sbjct: 13621 atagatgatgattctgaaact 13601
to top
>emb|CR382287.6| Human DNA sequence from clone bP-21216K13 on chromosome 21, complete
             sequence
          Length = 278310

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 562   gataatagatgatgattctga 582
             |||||||||||||||||||||
Sbjct: 12411 gataatagatgatgattctga 12431
to top
>emb|CR382285.2| Human DNA sequence from clone bP-21201H5 on chromosome 21, complete
             sequence
          Length = 178865

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 562   gataatagatgatgattctga 582
             |||||||||||||||||||||
Sbjct: 34537 gataatagatgatgattctga 34517
to top
>gb|AC073916.41| Homo sapiens 12 BAC RP11-408I18 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 205283

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 591   ctggaccagcaggggaagctc 611
             |||||||||||||||||||||
Sbjct: 37611 ctggaccagcaggggaagctc 37631
to top
>gb|BC033079.1| Homo sapiens, clone IMAGE:5455686, mRNA
          Length = 1457

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 88   gctcctcccagccccagccgctcct 112
            |||||| ||||||||||||||||||
Sbjct: 1278 gctcctgccagccccagccgctcct 1254
to top
>emb|AL162252.17| Human DNA sequence from clone RP11-55J24 on chromosome 9, complete
            sequence
          Length = 176845

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 562  gataatagatgatgattctga 582
            |||||||||||||||||||||
Sbjct: 2336 gataatagatgatgattctga 2356
to top
>gb|BC098920.2| Rattus norvegicus myosin light chain, regulatory B, mRNA (cDNA
           clone MGC:114341 IMAGE:7378266), complete cds
          Length = 997

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 88  gctcctcccagccccagccgctcct 112
           |||||| ||||||||||||||||||
Sbjct: 823 gctcctgccagccccagccgctcct 799
to top
>gb|AC102212.4| Mus musculus chromosome 8, clone RP24-374D15, complete sequence
          Length = 137171

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 366   agccccctcctatggtggttagcct 390
             ||||| |||||||||||||||||||
Sbjct: 90982 agcccactcctatggtggttagcct 91006
to top
>gb|AY037805.1| Oryza sativa (japonica cultivar-group) OSA15 protein mRNA, complete
            cds
          Length = 1943

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  tggtgtcatctgctgctgca 433
            ||||||||||||||||||||
Sbjct: 1573 tggtgtcatctgctgctgca 1554
to top
>gb|AC105772.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1504_G04,
            complete sequence
          Length = 88812

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  tggtgtcatctgctgctgca 433
            ||||||||||||||||||||
Sbjct: 8769 tggtgtcatctgctgctgca 8750
to top
>gb|AY466107.1| Oryza sativa (japonica cultivar-group) PSAG protein (PSAG) gene,
            complete cds
          Length = 4050

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  tggtgtcatctgctgctgca 433
            ||||||||||||||||||||
Sbjct: 3886 tggtgtcatctgctgctgca 3867
to top
>gb|AY466106.1| Oryza sativa (japonica cultivar-group) PSAG protein (PSAG) mRNA,
            complete cds
          Length = 1685

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  tggtgtcatctgctgctgca 433
            ||||||||||||||||||||
Sbjct: 1521 tggtgtcatctgctgctgca 1502
to top
>gb|AC116473.13| Mus musculus chromosome 8, clone RP23-385E22, complete sequence
          Length = 186155

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   tattggctttcctcaagcct 171
             ||||||||||||||||||||
Sbjct: 12107 tattggctttcctcaagcct 12126
to top
>gb|AC147618.3| Mus musculus chromosome 19 clone RP24-245M20, complete sequence
          Length = 172863

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 341   attaatgagcctgtctcacacagg 364
             ||||||||||||| ||||||||||
Sbjct: 53081 attaatgagcctgcctcacacagg 53058
to top
>emb|BX936358.10| Zebrafish DNA sequence from clone CH211-159A10 in linkage group 3,
             complete sequence
          Length = 165674

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 419   tcatctgctgctgcagggtcaaac 442
             |||||| |||||||||||||||||
Sbjct: 21953 tcatctcctgctgcagggtcaaac 21976
to top
>emb|AL356583.28| Human DNA sequence from clone RP11-690C23 on chromosome 1 Contains the 5'
              end of the SMYD3 gene for SET and MYND domain containing 3,
              an ubiquitin specific protease 6 (Tre-2 oncogene) (USP6)
              pseudogene, a novel gene, a pseudogene similar to part of
              tumor necrosis factor receptor superfamily member 13B
              (TNFRSF13B), a pseudogene similar to part of
              carboxypeptidase D (CPD), the TFB2M gene for mitochondrial
              transcription factor B2, the 5' end of the gene for a novel
              protein (FLJ32001, DKFZp451A152, DKFZp451B077, FLJ00215)
              and two CpG islands, complete sequence
          Length = 207486

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 441    acattggcatgaatagtttc 460
              ||||||||||||||||||||
Sbjct: 131184 acattggcatgaatagtttc 131165
to top
>gb|AC093550.3| Drosophila melanogaster 3L BAC RP98-24K7 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 184523

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 557    actgtgataatagatgatga 576
              ||||||||||||||||||||
Sbjct: 162476 actgtgataatagatgatga 162495
to top
>gb|AC010156.6| Drosophila melanogaster 3L NOVECTOR RP98-27H3 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 164831

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 557   actgtgataatagatgatga 576
             ||||||||||||||||||||
Sbjct: 82112 actgtgataatagatgatga 82093
to top
>gb|AC010444.5| Homo sapiens chromosome 5 clone CTD-2234B10, complete sequence
          Length = 91489

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    ctcctcccagccccagccgctcct 112
             |||||||||||||||||| |||||
Sbjct: 77570 ctcctcccagccccagcccctcct 77547
to top
>gb|AC155824.3| Mus musculus BAC clone RP23-136L1 from chromosome 8, complete sequence
          Length = 220437

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 152    tattggctttcctcaagcct 171
              ||||||||||||||||||||
Sbjct: 107252 tattggctttcctcaagcct 107233
to top
>gb|AC026405.5| Homo sapiens chromosome 5 clone CTC-347N9, complete sequence
          Length = 168779

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 89    ctcctcccagccccagccgctcct 112
             |||||||||||||||||| |||||
Sbjct: 18856 ctcctcccagccccagcccctcct 18833
to top
>gb|AC016779.5| Genomic sequence for Oryza sativa clone 10N6, complete sequence
          Length = 140234

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    tggtgtcatctgctgctgca 433
              ||||||||||||||||||||
Sbjct: 129805 tggtgtcatctgctgctgca 129824
to top
>gb|AC148697.1| Macaca mulatta Major Histocompatibility Complex BAC MMU248N17, complete
              sequence
          Length = 167487

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 531    aacagtcgtccaggacagga 550
              ||||||||||||||||||||
Sbjct: 126159 aacagtcgtccaggacagga 126140
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 414     tggtgtcatctgctgctgca 433
               ||||||||||||||||||||
Sbjct: 2730443 tggtgtcatctgctgctgca 2730424
to top
>gb|AC018662.3|AC018662 Human Chromosome 7 clone RP11-339C9, complete sequence
          Length = 173845

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 585   ctactgctggaccagcaggg 604
             ||||||||||||||||||||
Sbjct: 19342 ctactgctggaccagcaggg 19361
to top
>gb|AC008039.1|AC008039 Homo sapiens clone SCb-391H5 from 7q31, complete sequence
          Length = 197346

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 585    ctactgctggaccagcaggg 604
              ||||||||||||||||||||
Sbjct: 125013 ctactgctggaccagcaggg 125032
to top
>dbj|AK104683.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-A07, full
            insert sequence
          Length = 1410

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  tggtgtcatctgctgctgca 433
            ||||||||||||||||||||
Sbjct: 1167 tggtgtcatctgctgctgca 1148
to top
>dbj|AK069108.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008A06, full
            insert sequence
          Length = 1883

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  tggtgtcatctgctgctgca 433
            ||||||||||||||||||||
Sbjct: 1573 tggtgtcatctgctgctgca 1554
to top
>gb|AE003549.4| Drosophila melanogaster chromosome 3L, section 36 of 83 of the complete
              sequence
          Length = 295143

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 557    actgtgataatagatgatga 576
              ||||||||||||||||||||
Sbjct: 150634 actgtgataatagatgatga 150653
to top
>dbj|AP001527.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-732A21, complete
             sequence
          Length = 167305

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   ccccatcaacgtggaagtga 479
             ||||||||||||||||||||
Sbjct: 40103 ccccatcaacgtggaagtga 40084
to top
>emb|CR792434.8| Zebrafish DNA sequence from clone CH211-219O9 in linkage group 3,
             complete sequence
          Length = 69225

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 419   tcatctgctgctgcagggtcaaac 442
             |||||| |||||||||||||||||
Sbjct: 66942 tcatctcctgctgcagggtcaaac 66919
to top
>gb|AC134607.5| Mus musculus BAC clone RP23-65J2 from chromosome 9, complete sequence
          Length = 230480

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 416   gtgtcatctgctgctgcagggtca 439
             ||||||||||||| ||||||||||
Sbjct: 68424 gtgtcatctgctgatgcagggtca 68401
to top
>gb|AC149584.4| Mus musculus BAC clone RP24-298L13 from 8, complete sequence
          Length = 182904

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    gttcactctccattaatgag 349
              ||||||||||||||||||||
Sbjct: 117407 gttcactctccattaatgag 117426
to top
>gb|AC140929.4| Mus musculus BAC clone RP23-258I3 from 8, complete sequence
          Length = 221905

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 330   gttcactctccattaatgag 349
             ||||||||||||||||||||
Sbjct: 10360 gttcactctccattaatgag 10341
to top
>dbj|AP004511.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT17H19, TM0041,
             complete sequence
          Length = 108987

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 583   aactactgctggaccagcag 602
             ||||||||||||||||||||
Sbjct: 93291 aactactgctggaccagcag 93272
to top
>dbj|AB028136.1| Gallus gallus prkdc gene for DNA-dependent protein kinase catalytic
             subunit, complete cds
          Length = 84265

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 289   cctgaacttgcttccagtgg 308
             ||||||||||||||||||||
Sbjct: 45363 cctgaacttgcttccagtgg 45344


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,397,582
Number of Sequences: 3902068
Number of extensions: 5397582
Number of successful extensions: 108025
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107827
Number of HSP's gapped (non-prelim): 198
length of query: 672
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 649
effective length of database: 17,143,297,704
effective search space: 11126000209896
effective search space used: 11126000209896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top